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Hirano T, Saito T, Ito S, Ye B, Linscott TM, Do VT, Dong Z, Chiba S. Phylogenomic analyses reveal incongruences between divergence times and fossil records of freshwater snails in East Asia. Mol Phylogenet Evol 2023; 182:107728. [PMID: 36804427 DOI: 10.1016/j.ympev.2023.107728] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 01/26/2023] [Accepted: 02/05/2023] [Indexed: 02/17/2023]
Abstract
Fossils provide important insight into our understanding of phylogenetic history by serving as calibration points for divergence time estimation. However, uncertainties in the fossil record due to parallel evolution and convergent evolution can critically affect estimates of node ages. Here, we compare and contrast estimates of phylogenetic divergence with geologic and fossil history for two freshwater snail genera of the family Viviparidae in East Asia (Cipangopaludina and Margarya). Cipangopaludina species are commonly widely distributed species in East Asia, but extant Margarya species are endemic to the ancient lakes in Yunnan, China. According to some previous studies, parallel evolution or convergent evolution of shell morphology has occurred in the family several times which may affect divergence time estimation using fossil records. In this study, we used SNP data derived from ddRAD-seq loci to investigate population demographic history of both genera. Our results show a common pattern of lake endemic lineages diversifying from widely distributed lineages in the Miocene, and multiple colonization to a single ancient lake occurred in the Pleistocene. Our results indicate substantial incongruence among estimated phylogenomic divergence times, some fossil records, and formation ages of ancient lakes. These findings suggest some fossil records may be misidentified in these groups and highlight the need to carefully evaluate geological evidence and fossil records when using these for divergence time estimation.
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Affiliation(s)
- Takahiro Hirano
- Center for Northeast Asian Studies, Tohoku University, Miyagi, Japan; Graduate School of Life Sciences, Tohoku University, Miyagi, Japan; Biology Program, Faculty of Science, University of the Ryukyus, Okinawa, Japan.
| | - Takumi Saito
- Center for Northeast Asian Studies, Tohoku University, Miyagi, Japan; Department of Botany and Zoology, Faculty of Science, Masaryk University, Brno, Czech Republic
| | - Shun Ito
- Center for Northeast Asian Studies, Tohoku University, Miyagi, Japan
| | - Bin Ye
- Center for Northeast Asian Studies, Tohoku University, Miyagi, Japan; Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
| | - T Mason Linscott
- Department of Biological Sciences, Virginia Polytechnic Institute and State University, Blacksburg, USA
| | - Van Tu Do
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, Ha Noi, Viet Nam; Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Ha Noi, Viet Nam
| | - Zhengzhong Dong
- Agricultural Experiment Station, Zhejiang University, Hangzhou, China
| | - Satoshi Chiba
- Center for Northeast Asian Studies, Tohoku University, Miyagi, Japan; Graduate School of Life Sciences, Tohoku University, Miyagi, Japan
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Gadea A, Fanuel M, Le Lamer AC, Boustie J, Rogniaux H, Charrier M, Lohézic-Le Devehat F. Mass Spectrometry Imaging of Specialized Metabolites for Predicting Lichen Fitness and Snail Foraging. PLANTS (BASEL, SWITZERLAND) 2020; 9:plants9010070. [PMID: 31935813 PMCID: PMC7020473 DOI: 10.3390/plants9010070] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2019] [Revised: 12/16/2019] [Accepted: 01/01/2020] [Indexed: 05/21/2023]
Abstract
Lichens are slow-growing organisms supposed to synthetize specialized metabolites to protect themselves against diverse grazers. As predicted by the optimal defense theory (ODT), lichens are expected to invest specialized metabolites in higher levels in reproductive tissues compared to thallus. We investigated whether Laser Desorption Ionization coupled to Mass Spectrometry Imaging (LDI-MSI) could be a relevant tool for chemical ecology issues such as ODT. In the present study, this method was applied to cross-sections of thalli and reproductive tissues of the lichen Pseudocyphellaria crocata. Spatial mapping revealed phenolic families of metabolites. A quantification of these metabolites was carried out in addition to spatial imaging. By this method, accumulation of specialized metabolites was observed in both reproductive parts (apothecia and soralia) of P. crocata, but their nature depended on the lichen organs: apothecia concentrated norstictic acid, tenuiorin, and pulvinic acid derivatives, whereas soralia mainly contained tenuiorin and pulvinic acid. Stictic acid, tenuiorin and calycin, tested in no-choices feeding experiments, were deterrent for N. hookeri while entire thalli were consumed by the snail. To improve better knowledge in relationships between grazed and grazing organisms, LDI-MSI appears to be a complementary tool in ecological studies.
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Affiliation(s)
- Alice Gadea
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes)—UMR 6226, F-35000 Rennes, France; (A.G.); (J.B.)
- Univ Rennes, CNRS, ECOBIO (Ecosystèmes, biodiversité, évolution)—UMR 6553, F-35000 Rennes, France;
| | - Mathieu Fanuel
- INRA, UR1268 Biopolymers Interactions Assemblies, F-44316 Nantes, France; (M.F.); (H.R.)
| | | | - Joël Boustie
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes)—UMR 6226, F-35000 Rennes, France; (A.G.); (J.B.)
| | - Hélène Rogniaux
- INRA, UR1268 Biopolymers Interactions Assemblies, F-44316 Nantes, France; (M.F.); (H.R.)
| | - Maryvonne Charrier
- Univ Rennes, CNRS, ECOBIO (Ecosystèmes, biodiversité, évolution)—UMR 6553, F-35000 Rennes, France;
| | - Françoise Lohézic-Le Devehat
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes)—UMR 6226, F-35000 Rennes, France; (A.G.); (J.B.)
- Correspondence: ; Tel.: +33-223-230-540
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Le Ferrand H, Morii Y. Structure-behaviour correlations between two genetically closely related snail species. ROYAL SOCIETY OPEN SCIENCE 2020; 7:191471. [PMID: 32218964 PMCID: PMC7029891 DOI: 10.1098/rsos.191471] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/28/2019] [Accepted: 01/02/2020] [Indexed: 06/10/2023]
Abstract
Species, through their structure and composition, have evolved to respond to environmental constraints. Predator-prey interactions are among environmental pressures that can lead to speciation, but it remains unclear how this pressure can be related to the material structure and performance. Recently, two land snails, Karaftohelix editha and Karaftohelix gainesi, were found to exhibit divergent phenotypes and responses to predation despite sharing the same habitat and most of their genome. Indeed, under attack from a beetle, K. editha snails retract into their shell whereas K. gainesi snails swing their shell. In this paper, we looked at the microstructure, composition, morphology and mechanics of the shells of those two species and discuss potential relationships between material structure and the snail defence behaviour. The results of this study provide additional arguments for the role of predator-prey interactions on speciation, as well as an unusual approach for the design of biomimetic structures adapted to a particular function.
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Affiliation(s)
- H. Le Ferrand
- School of Mechanical and Aerospace Engineering, School of Materials Science and Engineering, Nanyang Technological University, 50 Nanyang Avenue, 639798, Singapore, Singapore
| | - Y. Morii
- Phenix Group, School of Agriculture and Environment, Massey University, Private Bag 11-222, Palmerston North 4410, New Zealand
- Department of Forest Science, Research Faculty of Agriculture, Hokkaido University, Sapporo, Hokkaido 0608589, Japan
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Hirano T, Saito T, Tsunamoto Y, Koseki J, Prozorova L, Do VT, Matsuoka K, Nakai K, Suyama Y, Chiba S. Role of ancient lakes in genetic and phenotypic diversification of freshwater snails. Mol Ecol 2019; 28:5032-5051. [DOI: 10.1111/mec.15272] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2019] [Revised: 09/14/2019] [Accepted: 09/16/2019] [Indexed: 01/17/2023]
Affiliation(s)
- Takahiro Hirano
- Department of Biological Sciences University of Idaho Moscow ID USA
| | - Takumi Saito
- Department of Biology Faculty of Science Toho University Funabashi Japan
| | - Yoshihiro Tsunamoto
- Tohoku Research Center Forestry and Forest Products Research Institute Morioka Japan
| | - Joichiro Koseki
- Graduate School of Life Sciences Tohoku University Sendai Japan
| | - Larisa Prozorova
- Federal Scientific Center of the East Asia Terrestrial Biodiversity Far Eastern Branch Russian Academy of Sciences Vladivostok Russia
| | - Van Tu Do
- Institute of Ecology and Biological Resources Vietnam Academy of Science and Technology Hanoi Vietnam
- Graduate University of Science and Technology Vietnam Academy of Science and Technology Hanoi Vietnam
| | | | | | - Yoshihisa Suyama
- Kawatabi Field Science Center Graduate School of Agricultural Science Tohoku University Osaki Japan
| | - Satoshi Chiba
- Graduate School of Life Sciences Tohoku University Sendai Japan
- Center for Northeast Asian Studies Tohoku University Sendai Japan
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Gadea A, Charrier M, Fanuel M, Clerc P, Daugan C, Sauvager A, Rogniaux H, Boustie J, Le Lamer AC, Lohézic-Le Devehat F. Overcoming deterrent metabolites by gaining essential nutrients: A lichen/snail case study. PHYTOCHEMISTRY 2019; 164:86-93. [PMID: 31102999 DOI: 10.1016/j.phytochem.2019.04.019] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Revised: 04/19/2019] [Accepted: 04/27/2019] [Indexed: 06/09/2023]
Abstract
Specialised metabolites in lichens are generally considered repellent compounds by consumers. Nevertheless, if the only food available is lichens rich in specialised metabolites, lichenophages must implement strategies to overcome the toxicity of these metabolites. Thus, the balance between phagostimulant nutrients and deterrent metabolites could play a key role in feeding preferences. To further understand lichen-gastropod interactions, we studied the feeding behaviour and consumption in Notodiscus hookeri, the land snail native to sub-Antarctic islands. The lichen Usnea taylorii was used because of its simple chemistry, its richness in usnic acid (specialised metabolite) and arabitol (primary metabolite) and its presence in snail habitats. Choice tests in arenas with intact lichens versus acetone-rinsed lichens were carried out to study the influence of specialised metabolites on snail behaviour and feeding preference. Simultaneously, usnic acid and arabitol were quantified and located within the lichen thallus using HPLC-DAD-MS and in situ imaging by mass spectrometry to assess whether their spatial distribution explained preferential snail grazing. No-choice feeding experiments, with the pure metabolites embedded in an artificial diet, defined a gradual gustatory response, from strong repellence (usnic acid) to high appetence (D-arabitol). This case study demonstrates that the nutritional activity of N. hookeri is governed by the chemical quality of the food and primarily by nutrient availability (arabitol), despite the presence of deterrent metabolite (usnic acid).
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Affiliation(s)
- Alice Gadea
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes), UMR 6226, F-35000 Rennes, France; Univ Rennes, CNRS, ECOBIO (Ecosystèmes, Biodiversité, évolution), UMR 6553, F-35000 Rennes, France
| | - Maryvonne Charrier
- Univ Rennes, CNRS, ECOBIO (Ecosystèmes, Biodiversité, évolution), UMR 6553, F-35000 Rennes, France
| | - Mathieu Fanuel
- INRA, UR1268 Biopolymers Interactions Assemblies, F-44316 Nantes, France
| | - Philippe Clerc
- Conservatoire et Jardin Botanique, Département de la culture et du sport, chemin de l'impératrice 1, 1292, Chambésy, Switzerland
| | - Corentin Daugan
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes), UMR 6226, F-35000 Rennes, France
| | - Aurélie Sauvager
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes), UMR 6226, F-35000 Rennes, France
| | - Hélène Rogniaux
- INRA, UR1268 Biopolymers Interactions Assemblies, F-44316 Nantes, France
| | - Joël Boustie
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes), UMR 6226, F-35000 Rennes, France
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Maeda H, Yamagishi R, Ishida EH, Kasuga T. Wettability and dynamics of water droplet on a snail shell. J Colloid Interface Sci 2019; 547:111-116. [PMID: 30947095 DOI: 10.1016/j.jcis.2019.03.096] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Revised: 03/27/2019] [Accepted: 03/28/2019] [Indexed: 12/25/2022]
Abstract
HYPOTHESIS There are many natural surfaces with special wettabilities. Snail shells have unique rough structures, which indicates a specific wettability. In this study, the surface of a snail shell was simulated using epoxy resins, and water droplet dynamics on original and simulated snail shells were investigated to understand its special wettability. EXPERIMENTS The shell of the Euhadra sandai species of snails was used. The surface structure of the snail shell was simulated using epoxy resins. The surface of this EP resin was treated with UV-O3 for different periods of time. Wettabilities and dynamics of water droplet on the samples were characterized. FINDINGS The surface of the snail shell with a water contact angle of approximately 85° caused the droplet to spread, which is the first report of water droplet dynamics on the shell surface. The behavior of a water droplet on the shell transformed from the Cassie state into the Wenzel state. Changes in the contact angle and diameter of the droplet base on the snail shell were larger than those on the epoxy resins. The surface roughness and chemical heterogeneity of the snail shell led to distortion of the three-phase contact line and enhancement of the spreading of the water droplet.
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Affiliation(s)
- Hirotaka Maeda
- Department of Life Science and Applied Chemistry, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555, Japan.
| | - Ryota Yamagishi
- Department of Life Science and Applied Chemistry, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555, Japan
| | - Emile Hideki Ishida
- Graduate School of Environmental Studies, Tohoku University, 6-6-20 Aoba, Aramaki, Aoba-ku, Sendai 980-8579, Japan
| | - Toshihiro Kasuga
- Department of Life Science and Applied Chemistry, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555, Japan
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Tresch S, Frey D, Le Bayon RC, Zanetta A, Rasche F, Fliessbach A, Moretti M. Litter decomposition driven by soil fauna, plant diversity and soil management in urban gardens. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 658:1614-1629. [PMID: 30678018 DOI: 10.1016/j.scitotenv.2018.12.235] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2018] [Revised: 12/14/2018] [Accepted: 12/15/2018] [Indexed: 06/09/2023]
Abstract
In the face of growing urban densification, green spaces in cities, such as gardens, are increasingly important for biodiversity and ecosystem services. However, the influences of urban green space management on biodiversity and ecosystem functioning (BEF) relationships is poorly understood. We investigated the relationship between soil fauna and litter decomposition in 170 urban garden sites along a gradient of urbanisation intensity in the city of Zurich, CH. We used litter bags of 1 and 4 mm mesh size to evaluate the contribution of soil meso- and macrofauna on litter decomposition. By using multilevel structural equation models (SEM), we investigated direct and indirect environmental effects and management practices on litter decomposition and litter residue quality. We evaluated the role of taxonomic, functional and phylogenetic diversity of soil fauna species on litter decomposition, based on a sample of 120 species (81,007 individuals; 39 collembola, 18 earthworm, 16 isopod, 47 gastropod species). We found highest litter decomposition rates using 4 mm mesh size litter bags, highlighting the importance of soil macrofauna. Urban warming, a proxy for urbanisation intensity, covaried positively, whereas soil disturbances, such as intensive soil and crop management, were negatively correlated with decomposition rates. Interestingly, soil fauna species richness decreased, with the exception of gastropods, and soil fauna abundance increased with urban warming. Our data also show that plant species richness positively affected litter decomposition by increasing soil fauna species richness and microbial activity. A multivariate analysis of organic compounds in litter residues confirmed the importance of soil fauna species richness and garden management on litter decomposition processes. Overall, we showed, that also in intensively managed urban green spaces, such as gardens, biodiversity of plants and soil fauna drives key ecosystem processes. Urban planning strategies that integrate soil protecting management practices may help to maintain important ecosystem services in this heavily used urban environment.
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Affiliation(s)
- Simon Tresch
- University of Neuchâtel, Institute of Biology, Functional Ecology Laboratory, Rue Emile-Argand 11, Neuchâtel 2000, Switzerland; Research Institute of Organic Agriculture (FiBL), Department of Soil Sciences, Ackerstrasse 113, Frick 5070, Switzerland; Swiss Federal Research Institute WSL, Biodiversity and Conservation Biology, Zuercherstrasse 111, Birmensdorf 8903, Switzerland.
| | - David Frey
- Swiss Federal Research Institute WSL, Biodiversity and Conservation Biology, Zuercherstrasse 111, Birmensdorf 8903, Switzerland; ETH, Department of Environmental System Science, Institute of Terrestrial Ecosystems, Universitaetstrasse 16, Zurich 8092, Switzerland
| | - Renée-Claire Le Bayon
- University of Neuchâtel, Institute of Biology, Functional Ecology Laboratory, Rue Emile-Argand 11, Neuchâtel 2000, Switzerland
| | - Andrea Zanetta
- Swiss Federal Research Institute WSL, Biodiversity and Conservation Biology, Zuercherstrasse 111, Birmensdorf 8903, Switzerland; University of Fribourg, Department of Biology, Chemin du musée 10, Fribourg 1700, Switzerland
| | - Frank Rasche
- Institute of Agricultural Sciences in the Tropics (Hans-Ruthenberg-Institute), University of Hohenheim, Garbenstr. 13, Stuttgart 70599, Germany
| | - Andreas Fliessbach
- Research Institute of Organic Agriculture (FiBL), Department of Soil Sciences, Ackerstrasse 113, Frick 5070, Switzerland
| | - Marco Moretti
- Swiss Federal Research Institute WSL, Biodiversity and Conservation Biology, Zuercherstrasse 111, Birmensdorf 8903, Switzerland
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Proćków M, Proćków J, Błażej P, Mackiewicz P. The influence of habitat preferences on shell morphology in ecophenotypes of Trochulus hispidus complex. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 630:1036-1043. [PMID: 29554725 DOI: 10.1016/j.scitotenv.2018.02.311] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Revised: 02/24/2018] [Accepted: 02/26/2018] [Indexed: 06/08/2023]
Abstract
Trochulus hispidus and T. sericeus are hairy snails widely distributed in Europe. They differ in shell morphology and are usually found in various land habitats. However, their morphology does not match genetic distance as they do not form distinct clades. Therefore, it is interesting to determine to what extent environmental factors can control their phenotypes. We analysed the morphological traits and many environmental features of their habitats to find relationships between these parameters and explain ecological reasons for this plasticity. We found many statistically significant correlations between morphological traits and environmental variables. Illumination, forestation, precipitation and temperature occurred the most important features discriminating habitats of these snails. It turned out that T. sericeus prefers forests and moist shaded places, while T. hispidus chooses more dry habitats and open areas exposed to the sun. T. sericeus is also probably more tolerant to low and variable temperatures. The hair durability is also correlated with their habitats: the shell of T. hispidus is mostly hairless but hairs almost always cover the shell of T. sericeus. These results support the hypothesis that the lack of hairs is associated with the loss of a potential adaptive function due to the change from wet to dry habitats. The hairs facilitate the adherence of snails to herbaceous plants during feeding when the humidity levels are high. The morphological divergence of T. hispidus and T. sericeus is the result of phenotypic plasticity and selection associated with the habitat, which affect both the shell shape and the hair durability. Since T. hispidus and T. sericeus do to not represent separate biological species and their variability has no genetic basis, they should be considered as ecophenotypes. This and our previous studies suggest that phenotypic plasticity in widely distributed Trochulus species is quite common and may have been of ancestral origin.
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Affiliation(s)
- Małgorzata Proćków
- Museum of Natural History, University of Wrocław, ul. Sienkiewicza 21, 50-335 Wrocław, Poland.
| | - Jarosław Proćków
- Department of Plant Biology, Institute of Biology, Wrocław University of Environmental and Life Sciences, ul. Kożuchowska 7a, 51-631 Wrocław, Poland
| | - Paweł Błażej
- Department of Genomics, Faculty of Biotechnology, University of Wrocław, ul. F. Joliot-Curie 14a, 50-383 Wrocław, Poland
| | - Paweł Mackiewicz
- Department of Genomics, Faculty of Biotechnology, University of Wrocław, ul. F. Joliot-Curie 14a, 50-383 Wrocław, Poland
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Gadea A, Le Lamer AC, Le Gall S, Jonard C, Ferron S, Catheline D, Ertz D, Le Pogam P, Boustie J, Lohézic-Le Devehat F, Charrier M. Intrathalline Metabolite Profiles in the Lichen Argopsis friesiana Shape Gastropod Grazing Patterns. J Chem Ecol 2018; 44:471-482. [PMID: 29611074 DOI: 10.1007/s10886-018-0953-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2018] [Revised: 03/19/2018] [Accepted: 03/21/2018] [Indexed: 11/29/2022]
Abstract
Lichen-gastropod interactions generally focus on the potential deterrent or toxic role of secondary metabolites. To better understand lichen-gastropod interactions, a controlled feeding experiment was designed to identify the parts of the lichen Argopsis friesiana consumed by the Subantarctic land snail Notodiscus hookeri. Besides profiling secondary metabolites in various lichen parts (apothecia, cephalodia, phyllocladia and fungal axis of the pseudopodetium), we investigated potentially beneficial resources that snails can utilize from the lichen (carbohydrates, amino acids, fatty acids, polysaccharides and total nitrogen). Notodiscus hookeri preferred cephalodia and algal layers, which had high contents of carbohydrates, nitrogen, or both. Apothecia were avoided, perhaps due to their low contents of sugars and polyols. Although pseudopodetia were characterized by high content of arabitol, they were also rich in medullary secondary compounds, which may explain why they were not consumed. Thus, the balance between nutrients (particularly nitrogen and polyols) and secondary metabolites appears to play a key role in the feeding preferences of this snail.
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Affiliation(s)
- Alice Gadea
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes) - UMR 6226, F-35000, Rennes, France.,Univ Rennes, CNRS, ECOBIO (Ecosystèmes, Biodiversité, Evolution) - UMR 6553, F-35000, Rennes, France
| | - Anne-Cécile Le Lamer
- Univ Toulouse 3 Paul Sabatier, IRD, Pharma-Dev - UMR 152, F-31400, Toulouse, France
| | - Sophie Le Gall
- INRA, BIA (Biopolymers Interactions Assemblies) - UR 1268, F-44316, Nantes, France
| | - Catherine Jonard
- INRA, BIA (Biopolymers Interactions Assemblies) - UR 1268, F-35650, Le Rheu, France
| | - Solenn Ferron
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes) - UMR 6226, F-35000, Rennes, France
| | - Daniel Catheline
- INRA, Agrocampus Ouest - USC 1378, F-35042, Rennes Cedex, France
| | - Damien Ertz
- Botanic Garden Meise, Department Research, Nieuwelaan 38, B-1860, Meise, Belgium
| | - Pierre Le Pogam
- Univ Rennes, CNRS, IETR (Institut d'Electronique et de Télécommunications de Rennes) - UMR 6164, F-35000, Rennes, France
| | - Joël Boustie
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes) - UMR 6226, F-35000, Rennes, France
| | | | - Maryvonne Charrier
- Univ Rennes, CNRS, ECOBIO (Ecosystèmes, Biodiversité, Evolution) - UMR 6553, F-35000, Rennes, France.
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10
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Gadea A, Le Pogam P, Biver G, Boustie J, Le Lamer AC, Le Dévéhat F, Charrier M. Which Specialized Metabolites Does the Native Subantarctic Gastropod Notodiscus hookeri Extract from the Consumption of the Lichens Usnea taylorii and Pseudocyphellaria crocata? Molecules 2017; 22:molecules22030425. [PMID: 28282888 PMCID: PMC6155395 DOI: 10.3390/molecules22030425] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2017] [Revised: 02/23/2017] [Accepted: 03/01/2017] [Indexed: 01/28/2023] Open
Abstract
Notodiscus hookeri is the only representative of terrestrial gastropods on Possession Island and exclusively feeds on lichens. The known toxicity of various lichen metabolites to plant-eating invertebrates led us to propose that N. hookeri evolved means to protect itself from their adverse effects. To validate this assumption, the current study focused on the consumption of two lichen species: Usnea taylorii and Pseudocyphellaria crocata. A controlled feeding experiment was designed to understand how the snail copes with the unpalatable and/or toxic compounds produced by these lichen species. The occurrence of two snail ecophenotypes, represented by a mineral shell and an organic shell, led to address the question of a metabolic response specific to the phenotype. Snails were fed for two months with one of these lichens and the chemical profiles of biological samples of N. hookeri (i.e., crop, digestive gland, intestine, and feces) were established by HPLC-DAD-MS and compared to that of the lichens. N. hookeri appears as a generalist lichen feeder able to consume toxic metabolite-containing lichens, independently of the ecophenotype. The digestive gland did not sequester lichen metabolites. The snail metabolism might be based on four non-exclusive processes according to the concerned metabolites (avoidance, passive transport, hydrolysis, and excretion).
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Affiliation(s)
- Alice Gadea
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6553 (ECOBIO), 263 Avenue du Général Leclerc, 35042 Rennes CEDEX, France.
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6226 (ISCR), 2 Avenue du Professeur Léon Bernard, 35043 Rennes CEDEX, France.
| | - Pierre Le Pogam
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6226 (ISCR), 2 Avenue du Professeur Léon Bernard, 35043 Rennes CEDEX, France.
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6164 (IETR), 263 Avenue du Général Leclerc, 35042 Rennes CEDEX, France.
| | - Grichka Biver
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6553 (ECOBIO), 263 Avenue du Général Leclerc, 35042 Rennes CEDEX, France.
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6226 (ISCR), 2 Avenue du Professeur Léon Bernard, 35043 Rennes CEDEX, France.
| | - Joël Boustie
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6226 (ISCR), 2 Avenue du Professeur Léon Bernard, 35043 Rennes CEDEX, France.
| | - Anne-Cécile Le Lamer
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6226 (ISCR), 2 Avenue du Professeur Léon Bernard, 35043 Rennes CEDEX, France.
- Université Midi-Pyrénées, Université Paul Sabatier Toulouse 3, 118 Route de Narbonne, 31062 Toulouse CEDEX, France.
| | - Françoise Le Dévéhat
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6226 (ISCR), 2 Avenue du Professeur Léon Bernard, 35043 Rennes CEDEX, France.
| | - Maryvonne Charrier
- Université Bretagne-Loire, Université de Rennes 1, UMR CNRS 6553 (ECOBIO), 263 Avenue du Général Leclerc, 35042 Rennes CEDEX, France.
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First proteomic analyses of the dorsal and ventral parts of the Sepia officinalis cuttlebone. J Proteomics 2017; 150:63-73. [DOI: 10.1016/j.jprot.2016.08.015] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2016] [Revised: 08/19/2016] [Accepted: 08/23/2016] [Indexed: 12/12/2022]
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Arivalagan J, Yarra T, Marie B, Sleight VA, Duvernois-Berthet E, Clark MS, Marie A, Berland S. Insights from the Shell Proteome: Biomineralization to Adaptation. Mol Biol Evol 2017; 34:66-77. [PMID: 27744410 PMCID: PMC5854119 DOI: 10.1093/molbev/msw219] [Citation(s) in RCA: 85] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Bivalves have evolved a range of complex shell forming mechanisms that are reflected by their incredible diversity in shell mineralogy and microstructures. A suite of proteins exported to the shell matrix space plays a significant role in controlling these features, in addition to underpinning some of the physical properties of the shell itself. Although, there is a general consensus that a minimum basic protein tool kit is required for shell construction, to date, this remains undefined. In this study, the shell matrix proteins (SMPs) of four highly divergent bivalves (The Pacific oyster, Crassostrea gigas; the blue mussel, Mytilus edulis; the clam, Mya truncata, and the king scallop, Pecten maximus) were analyzed in an identical fashion using proteomics pipeline. This enabled us to identify the critical elements of a "basic tool kit" for calcification processes, which were conserved across the taxa irrespective of the shell morphology and arrangement of the crystal surfaces. In addition, protein domains controlling the crystal layers specific to aragonite and calcite were also identified. Intriguingly, a significant number of the identified SMPs contained domains related to immune functions. These were often are unique to each species implying their involvement not only in immunity, but also environmental adaptation. This suggests that the SMPs are selectively exported in a complex mix to endow the shell with both mechanical protection and biochemical defense.
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Affiliation(s)
- Jaison Arivalagan
- UMR 7245 CNRS/MNHN Molécules de Communications et Adaptations des Micro-organismes, Sorbonne Universités, Muséum national d'Histoire naturelle, Paris, France
- UMR 7208 CNRS/MNHN/UPMC/IRD Biologie des Organismes Aquatiques et Ecosystèmes, Sorbonne Universités, Muséum national d'Histoire naturelle, Paris, France
| | - Tejaswi Yarra
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, United Kingdom
- University of Edinburgh, Institute of Evolutionary Biology, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, United Kingdom
| | - Benjamin Marie
- UMR 7245 CNRS/MNHN Molécules de Communications et Adaptations des Micro-organismes, Sorbonne Universités, Muséum national d'Histoire naturelle, Paris, France
| | - Victoria A Sleight
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, United Kingdom
| | - Evelyne Duvernois-Berthet
- UMR 7221 CNRS/MNHN Evolution des Régulations Endocriniennes, Sorbonne Universités, Muséum national d'Histoire naturelle, Paris, France
| | - Melody S Clark
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, United Kingdom
| | - Arul Marie
- UMR 7245 CNRS/MNHN Molécules de Communications et Adaptations des Micro-organismes, Sorbonne Universités, Muséum national d'Histoire naturelle, Paris, France
| | - Sophie Berland
- UMR 7208 CNRS/MNHN/UPMC/IRD Biologie des Organismes Aquatiques et Ecosystèmes, Sorbonne Universités, Muséum national d'Histoire naturelle, Paris, France
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