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For: Bourgeois S, Kaden J, Senn H, Bunnefeld N, Jeffery KJ, Akomo-Okoue EF, Ogden R, McEwing R. Improving cost-efficiency of faecal genotyping: New tools for elephant species. PLoS One 2019;14:e0210811. [PMID: 30699177 PMCID: PMC6353156 DOI: 10.1371/journal.pone.0210811] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Accepted: 01/02/2019] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
1
Solari KA, Ahmad S, Armstrong EE, Campana MG, Ali H, Hameed S, Ullah J, Khan BU, Nawaz MA, Petrov DA. Next-Generation Snow Leopard Population Assessment Tool: Multiplex-PCR SNP Panel for Individual Identification From Faeces. Mol Ecol Resour 2025;25:e14074. [PMID: 39887922 DOI: 10.1111/1755-0998.14074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2024] [Revised: 12/23/2024] [Accepted: 01/13/2025] [Indexed: 02/01/2025]
2
Sinovas P, Smith C, Keath S, Chantha N, Kaden J, Ith S, Ball A. Giants in the landscape: status, genetic diversity, habitat suitability and conservation implications for a fragmented Asian elephant (Elephas maximus) population in Cambodia. PeerJ 2025;13:e18932. [PMID: 40093415 PMCID: PMC11910960 DOI: 10.7717/peerj.18932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Accepted: 01/14/2025] [Indexed: 03/19/2025]  Open
3
Premachandra HKA, Piza-Roca C, Casteriano A, Higgins DP, Hohwieler K, Powell D, Cristescu RH. Advancements in noninvasive koala monitoring through combining Chlamydia detection with a targeted koala genotyping assay. Sci Rep 2024;14:30371. [PMID: 39638795 PMCID: PMC11621440 DOI: 10.1038/s41598-024-76873-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Accepted: 10/17/2024] [Indexed: 12/07/2024]  Open
4
Siziba VI, Scroeder MM, Wilson B, Sliwa A, Willows‐Munro S. A method for noninvasive individual genotyping of black-footed cat (Felis nigripes). Ecol Evol 2024;14:e11315. [PMID: 38660470 PMCID: PMC11040180 DOI: 10.1002/ece3.11315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 03/07/2024] [Accepted: 04/05/2024] [Indexed: 04/26/2024]  Open
5
Paul S, Shahar N, Seifan M, Bar‐David S. An experimental design for obtaining DNA of a target species and its diet from a single non-invasive genetic protocol. Ecol Evol 2023;13:e10616. [PMID: 37877104 PMCID: PMC10590962 DOI: 10.1002/ece3.10616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 09/02/2023] [Accepted: 10/04/2023] [Indexed: 10/26/2023]  Open
6
Chen Y, Sun Y, Hua M, Shi K, Dudgeon D. Using genetic tools to inform conservation of fragmented populations of Asian elephants (Elephas maximus) across their range in China. Integr Zool 2023;18:453-468. [PMID: 36052971 DOI: 10.1111/1749-4877.12680] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
7
Lee DE, Lohay GG, Madeli J, Cavener DR, Bond ML. Masai giraffe population change over 40 years in Arusha National Park. Afr J Ecol 2023. [DOI: 10.1111/aje.13115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
8
de Flamingh A, Ishida Y, Pečnerová P, Vilchis S, Siegismund HR, van Aarde RJ, Malhi RS, Roca AL. Combining methods for non-invasive fecal DNA enables whole genome and metagenomic analyses in wildlife biology. Front Genet 2023;13:1021004. [PMID: 36712847 PMCID: PMC9876978 DOI: 10.3389/fgene.2022.1021004] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Accepted: 12/05/2022] [Indexed: 01/13/2023]  Open
9
Targeted genome-wide SNP genotyping in feral horses using non-invasive fecal swabs. CONSERV GENET RESOUR 2022;14:203-213. [PMID: 35673611 PMCID: PMC9162989 DOI: 10.1007/s12686-022-01259-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Accepted: 02/24/2022] [Indexed: 11/22/2022]
10
Identifying individual ungulates from fecal DNA: a comparison of field collection methods to maximize efficiency, ease, and success. Mamm Biol 2022. [DOI: 10.1007/s42991-021-00176-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
11
Kleemann S, Sandow D, Stevens M, Schultz DJ, Taggart DA, Croxford A. Non-invasive monitoring and reintroduction biology of the brush-tailed rock-wallaby (. AUST J ZOOL 2022. [DOI: 10.1071/zo21009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
12
Cowen S, Smith M, McArthur S, Rayner K, Jackson C, Anderson G, Ottewell K. Novel microsatellites and investigation of faecal DNA as a non-invasive population monitoring tool for the banded hare-wallaby (. AUST J ZOOL 2022. [DOI: 10.1071/zo21015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
13
Hayward KM, Clemente-Carvalho RBG, Jensen EL, de Groot PVC, Branigan M, Dyck M, Tschritter C, Sun Z, Lougheed SC. Genotyping-in-thousands by sequencing (GT-seq) of non-invasive fecal and degraded samples: a new panel to enable ongoing monitoring of Canadian polar bear populations. Mol Ecol Resour 2022;22:1906-1918. [PMID: 35007402 PMCID: PMC9305793 DOI: 10.1111/1755-0998.13583] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Revised: 11/25/2021] [Accepted: 12/07/2021] [Indexed: 11/26/2022]
14
Estimating forest antelope population densities using distance sampling with camera traps. ORYX 2021. [DOI: 10.1017/s0030605320001209] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
15
Laguardia A, Gobush K, Bourgeois S, Strindberg S, Abitsi G, Ebouta F, Fay J, Gopalaswamy A, Maisels F, Ogden R, White L, Stokes E. Assessing the feasibility of density estimation methodologies for African forest elephant at large spatial scales. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01550] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]  Open
16
Marasinghe MSLRP, Nilanthi RMR, Hathurusinghe HABM, Sooriyabandara MGC, Chandrasekara CHWMRB, Jayawardana KANC, Kodagoda MM, Rajapakse RC, Bandaranayake PCG. Revisiting traditional SSR based methodologies available for elephant genetic studies. Sci Rep 2021;11:8718. [PMID: 33888797 PMCID: PMC8062488 DOI: 10.1038/s41598-021-88034-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Accepted: 03/30/2021] [Indexed: 02/02/2023]  Open
17
García NC, Robinson WD. Current and Forthcoming Approaches for Benchmarking Genetic and Genomic Diversity. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.622603] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
18
Bourgeois S, Ouitavon K, Kongmee P, Veeramaethaphan T, Kaden J, McEwing R. A simple sexing test for elephant species and its application to faecal DNA. J Appl Genet 2021;62:507-509. [PMID: 33759056 DOI: 10.1007/s13353-021-00627-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 11/11/2020] [Accepted: 03/04/2021] [Indexed: 11/30/2022]
19
Chen Y, Sun Y, Atzeni L, Gibson L, Hua M, Li K, Shi K, Dudgeon D. Anthropogenic pressures increase extinction risk of an isolated Asian elephant (Elephas maximus) population in southwestern China, as revealed by a combination of molecular- and landscape-scale approaches. Integr Zool 2021;17:1078-1094. [PMID: 33728791 DOI: 10.1111/1749-4877.12534] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
20
Enabling pinniped conservation by means of non-invasive genetic population analysis. CONSERV GENET RESOUR 2021. [DOI: 10.1007/s12686-020-01182-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
21
Factors influencing genotyping success and genotyping error rate of Eurasian otter (Lutra lutra) faeces collected in temperate Central Europe. EUR J WILDLIFE RES 2020. [DOI: 10.1007/s10344-020-01444-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
22
QUANTITATIVE and QUALITATIVE TEST of THE FECAL SAMPEL FROM SUMATRAN ELEPHANT (Elephas maximus sumatranus). BIOVALENTIA: BIOLOGICAL RESEARCH JOURNAL 2020. [DOI: 10.24233/biov.6.2.2020.163] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
23
Eriksson CE, Ruprecht J, Levi T. More affordable and effective noninvasive single nucleotide polymorphism genotyping using high‐throughput amplicon sequencing. Mol Ecol Resour 2020;20:1505-1516. [DOI: 10.1111/1755-0998.13208] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2019] [Revised: 05/28/2020] [Accepted: 05/29/2020] [Indexed: 12/26/2022]
24
Donaldson ME, Jackson K, Rico Y, Sayers JB, Ethier DM, Kyle CJ. Development of a massively parallel, genotyping-by-sequencing assay in American badger (Taxidea taxus) highlights the need for careful validation when working with low template DNA. CONSERV GENET RESOUR 2020. [DOI: 10.1007/s12686-020-01146-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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