Comparative study of eggshell antibacterial effectivity in precocial and altricial birds using Escherichia coli

Can explainable AI classify shrike (Laniidae) eggs by uncovering species-wide pigmentation patterns?

The complex patterns on bird eggs, characterized by their replicability, distinctiveness, and intricacy, play significant roles in avian biology, including camouflage, protection from brood parasites, protecting embryos, nest identification, strengthening eggshells, and female sexual selection. The genus Lanius, known for its distinctive pigmentation patterns, shows considerable variability within species, making it an intriguing but poorly understood group. We applied Explainable AI (XAI) methods to uncover pigmentation patterns that represent species-wide identification signatures. To do this, we used Convolutional Neural Networks (CNNs) to classify shrike eggs and explore potential correlations between egg identification and eggshell patterns. Our CNN model achieved over 95% accuracy in predicting species, but identifying specific discriminative features proved difficult, as the model only highlighted general trends. This method could help organize collections and verify species affiliation in global ornithological collections, which often face challenges such as missing or illegible labels. CNNs can enhance species identification and improve the accuracy of ornithological studies. Despite some challenges, the potential applications of this research in avian biology and museum collections are promising. It offers new insights into the role of eggshell patterns in avian evolutionary strategies. This approach not only enriches our understanding of egg pigmentation but also contributes to advancements in studies spanning from ecology to biomedical research.

Characterization of enterotoxin, antibiotic resistance genes, and antimicrobial susceptibility profiling of Staphylococcus aureus isolated from table eggs: Implications for food safety and public health

Background

Staphylococcus aureus is a significant pathogen in both clinical and food safety contexts, capable of contaminating table eggs, which are a common dietary staple worldwide.

Aim

This study aimed to assess the prevalence, molecular characteristics, and antibiotic resistance profiles of S. aureus isolated from table eggs. The focus was on identifying methicillin-resistant S. aureus (MRSA) strains that produce enterotoxin (seb), resistance to β-lactam antibiotics (blaTEM), tetracycline (tetA), and vancomycin-resistant S. aureus.

Methods

A total of 200 egg samples were collected from various retail sources in Mymensingh City Corporation, Bangladesh. Swab samples (n = 100) were collected from eggshells, and another 100 samples were collected from the inner membrane, egg white, and yolk. Samples were enriched in trypticase soy broth and cultured on mannitol salt agar. Staphylococcus aureus was isolated through conventional culture techniques, confirmed by polymerase chain reaction targeting the nuc, and further screened for the mecA, seb, blaTEM, tetA, vanA, and vanC genes. Antibiotic susceptibility testing was conducted using the disc diffusion method against 13 antibiotics. Bivariate analysis is used to assess the strong and significant correlations between virulence genes and the pairs of any of two antibiotic-resistant S. aureus.

Results

Staphylococcus spp. and S. aureus were detected in 53% and 21% of eggshell samples, respectively, and 41% and 13% of egg content samples. Among 34 coagulase-positive isolates, 12 (57.14%) from eggshells and 4 (30.78%) from egg contents were positive for the nuc gene. Resistance was observed in eggshell isolates for mecA (33.33%), blaTEM (85.71%), tetA (33.33%), vanA (19.04%), vanC (33.33%), and seb (20.50%), whereas egg content isolates showed resistance to blaTEM (46.15%) and vanC (7.80%). All coagulase-positive isolates exhibited significant resistance to β-lactam antibiotics, cephalosporins, and glycopeptides, especially vancomycin. Notably, 19 (90.47%) and 12 (92.30%) eggshell and egg content isolates, respectively, were multidrug-resistant, with multiple antibiotic resistance indices ranging from 0.23 to 0.76.

Conclusion

The study revealed a high prevalence of multidrug-resistant S. aureus in table eggs, indicating a significant public health risk. The presence of MRSA and strains with enterotoxins and resistance genes underscores the need for enhanced monitoring, stricter biosecurity measures, and robust control strategies for egg production and distribution to ensure food safety.

The effect of avian eggshell membrane structure on microbial penetration: A simulation study

Avian eggshells exhibit excellent antimicrobial properties. In this study, we conducted simulation experiments to explore the defense mechanisms of eggshell membranes with regards to their physical features. We developed a mathematical model for the movement of microorganisms and estimated their penetration ratio into eggshell membranes based on several factors, including membrane thickness, microbial size, directional drift, and attachment probability to membrane fibers. These results not only suggest that an eggshell membrane with multiple layers and low porosity indicates high antimicrobial performance, but also imply that the fibrous network structure of the membrane might contribute to effective defense. Our simulation results aligned with experimental findings, specifically in measuring the penetration time of Escherichia coli through the eggshell membrane. We briefly discuss the significance and limitations of this pilot study, as well as the potential for these results, to serve as a foundation for the development of antimicrobial materials.

Control of Escherichia coli in Poultry Using the In Ovo Injection Technique

Pathogens, such as Escherichia coli (E. coli), have been identified as significant causes of poultry mortality. Poultry can serve as potential sources of E. coli transmission, even when asymptomatic, posing a substantial threat to food safety and human health. The in ovo administration of antimicrobials is crucial for preventing and/or effectively combating acute and chronic infections caused by poultry pathogens. To achieve this goal, it is critical that antimicrobials are properly injected into embryonic fluids, such as the amnion, to reach target tissues and trigger robust antimicrobial responses. Several protocols based on antimicrobials were evaluated to meet these requirements. This review analyzed the impacts of antimicrobial substances injected in ovo on the control of E. coli in poultry. The reduction in infection rates, resulting from the implementation of in ovo antimicrobials, combined with efforts aimed at hygienic-sanitary action plans in poultry sheds, reinforces confidence that E. coli can be contained before causing large scale damage. For example, antimicrobial peptides and probiotics have shown potential to provide protection to poultry against infections caused by E. coli. Issues related to the toxicity and bacterial resistance of many synthetic chemical compounds represent challenges that need to be overcome before the commercial application of in ovo injection protocols focused on microbiological control.

The reproductive microbiome and maternal transmission of microbiota via eggs in Sceloporus virgatus

Maternal transmission of microbes occurs across the animal kingdom and is vital for offspring development and long-term health. The mechanisms of this transfer are most well-studied in humans and other mammals but are less well-understood in egg-laying animals, especially those with no parental care. Here, we investigate the transfer of maternal microbes in the oviparous phrynosomatid lizard, Sceloporus virgatus. We compared the microbiota of three maternal tissues-oviduct, cloaca, and intestine-to three offspring sample types: egg contents and eggshells on the day of oviposition, and hatchling intestinal tissue on the day of hatching. We found that maternal identity is an important factor in hatchling microbiome composition, indicating that maternal transmission is occurring. The maternal cloacal and oviductal communities contribute to offspring microbiota in all three sample types, with minimal microbes sourced from maternal intestines. This indicates that the maternal reproductive microbiome is more important for microbial inheritance than the gut microbiome, and the tissue-level variation of the adult S. virgatus microbiota must develop as the hatchling matures. Despite differences between adult and hatchling communities, offspring microbiota were primarily members of the Enterobacteriaceae and Yersiniaceae families (Phylum Proteobacteria), consistent with this and past studies of adult S. virgatus microbiomes.

Effect of Dietary Supplemental Zinc on Laying Performance, Egg Quality, and Plasma Hormone Levels of Breeding Pigeons

This study aimed to evaluate the dietary zinc requirement of parental pigeons for better laying and reproductive performance, egg quality, sex hormones, and mineral content in eggs. A total of 160 pairs of healthy American Silver King pigeons were randomly assigned to five treatments of eight replicate cages each with four pairs of birds per cage, and fed a basal diet without zinc supplementation or the basal diet supplemented with 30, 60, 90, and 120 mg of zinc/kg (ZnSO₄·7H₂O). The experiment lasted for 45 days, including two laying cycles. Results indicated the egg production rate (P = 0.081), egg shape index (P = 0.038), egg eggshell percentage (P = 0.070), and zinc and calcium contents (P < 0.01) tended to be affected or significantly affected by zinc addition. They increased quadratically with dietary zinc levels (P < 0.05). Besides, shell thickness (P = 0.069), plasma testosterone (P = 0.008), LH, and carbonic anhydrase contents (P < 0.05) tended to be affected or significantly affected by zinc addition. They increased linearly as dietary zinc level increased (P < 0.05). Compared with the control, 60 mg/kg zinc addition increased egg production rate, egg shape index, zinc and calcium contents in eggshell, and plasma testosterone concentration in pigeons (P < 0.05), and tended to increase the eggshell percentage (P = 0.07). Besides, supplemental 120 mg/kg zinc had higher shell thickness and LH content than control (P < 0.05), but had no difference with 60 mg/kg zinc addition. In conclusion, the supplementation of zinc at the level of 60 mg/kg to basal diet improved laying performance by increasing eggshell quality and sex hormone levels of breeding pigeons.

Cuticle deposition duration in the uterus is correlated with eggshell cuticle quality in White Leghorn laying hens

The cuticle formed in the uterus is the outermost layer as the first defense line of eggshell against microbial invasions in most avian species, and analyzing its genetic regulation and influencing factors are of great importance to egg biosecurity in poultry production worldwide. The current study compared the uterine transcriptome and proteome of laying hens producing eggs with good and poor cuticle quality (GC and PC, the top and tail of the cuticle quality distribution), and identified several genes involved with eggshell cuticle quality (ESCQ). Overall, transcriptomic analysis identified 53 differentially expressed genes (DEGs) between PC versus GC group hens, among which 25 were up-regulated and 28 were down-regulated. No differences were found in the uterine proteome. Several DEGs, including PTGDS, PLCG2, ADM and PRLR related to uterine functions and reproductive hormones, were validated by qPCR analysis. Egg quality measurements between GC and PC hens showed GC hens had longer laying interval between two consecutive ovipositions (25.64 ± 1.23 vs 24.94 ± 1.12 h) and thicker eggshell thickness (352.01 ± 23.04 vs 316.20 ± 30.58 μm) (P < 0.05). Apart from eggshell traits, other egg quality traits didn't differ. The result demonstrated eggshell and cuticle deposition duration in the uterus is one of the major factors affecting ESCQ in laying hens. PTGDS, PLCG2, ADM and PRLR genes were discovered and might play crucial roles in cuticle deposition by regulating the uterine muscular activities and secretion function. The findings in the present study provide new insights into the genetic regulation of cuticle deposition in laying hens and establish a foundation for further investigations.

Impact of Different Layer Housing Systems on Eggshell Cuticle Quality and Salmonella Adherence in Table Eggs

The bacterial load on the eggshell surface is a key factor in predicting the bacterial penetration and contamination of the egg interior. The eggshell cuticle is the first line of defense against vertical penetration by microbial food-borne pathogens such as Salmonella Enteritidis. Egg producers are increasingly introducing alternative caging systems into their production chain as animal welfare concerns become of greater relevance to today’s consumer. Stress that is introduced by hen aggression and modified nesting behavior in furnished cages can alter the physiology of egg formation and affect the cuticle deposition/quality. The goal of this study was to determine the impact of caging systems (conventional, enriched, free-run, and free-range), on eggshell cuticle parameters and the eggshell bacterial load. The cuticle plug thickness and pore length were higher in the free-range eggs as compared to conventional eggs. The eggshells from alternative caging (enriched and free-range) had a higher total cuticle as compared to conventional cages. A reduction in bacterial cell counts was observed on eggshells that were obtained from free-range eggs as compared to the enriched systems. An inverse correlation between the contact angle and Salmonella adherence was observed. These results indicate that the housing systems of layer hens can modify the cuticle quality and thereby impact bacterial adherence and food safety.

The effect of nanosilver in carriers based on polymer/inorganic hybrids on the quality and safety of edible chicken eggs

One of the modern antibacterial agents that are an alternative to antibiotics are nanoparticles of noble metals, including silver. To reduce their toxicity, cumulative effect and prolong the effect in animals, there is ongoing work on development and improvement of the methods for their synthesis using various carriers, including those based on polymer/inorganic hybrids. In this study, the quality and safety of edible eggs were determined on Hy-Line laying hens using W36 solutions of nanosilver in carriers based on polymer/inorganic hybrids (AgNPs/SPH) in the concentration of 0.0, 1.0 and 2.0 mg/L of water (0.0, 0.2 and 0.4 mg per hen per day) three times with 10 day interval. We determined that one-, two- and three-time feeding of nanosilver in doses of 0.0, 0.2 and 0.4 mg per hen per day did not affect water consumption, feed, egg productivity, as well as dry matter content, crude protein, fat, ash, and calcium and phosphorus in eggs for 30 days. Contamination of the surface of the shell and yolks of eggs with mesophilic aerobic and facultative anaerobic microorganisms (MAFAnM) did not depend on the dose and duration of consumption of the nanosilver drug by laying hens. The nanosilver drug in doses of 0.0, 0.2 and 0.4 mg per hen per day did not affect the contamination of the egg shell surface with microorganisms of genera Citrobacter, Klebsiella, as well as Escherichia coli, Proteus mirabilis, Salmonella spp., Staphylococcus aureus and S. epidermidis. When administered orally, nanosilver in the dose of 0.2 mg per hen per day did not change the number of symbiotic microorganisms of genera Bifidobacterium and Lactobacillus, while and the dose of 0.4 mg per hen daily slightly reduced the number of microorganisms of genus Lactobacillus in the hens’ manure. The obtained data can be used for further research to determine the effective dose and interval of application of nanosilver preparations to poultry for preventive and therapeutic measures, taking into account the preservation of the microbiome of the digestive system of hens.

Acetic acid, vinegar, and citric acid as washing materials for cuticle removal to improve hatching performance of quail eggs

The cuticle is the outmost layer of the eggshell and may affect the hatchability by modulating eggshell conductance. Three different solutions using acetic acid (AA), vinegar (V), and citric acid (CA) for cuticle removal by egg washing were developed, and the effects of cuticle removal on hatching performance of quail hatching eggs were evaluated. A total of 5,238 fresh quail hatching eggs were randomly divided into 9 treatments as follows: unwashed control, nondipped (CND); washed control, water dipped (CWD); standard control, 0.13% sodium hyperchlorite (CSH); 2% AA (AA2); 4% AA (AA4); 44.4% V (V2); 88.8% V (V4); 2% CA (CA2); and 4% CA (CA4). Overall, AA4, V4, and CA4 treatments significantly improved the hatchability of fertile eggs (95.42%, 94.16% and 95.66%, respectively) (P < 0.05) and the hatchability of CND, CWD, CSH, AA2, V2 and CA2 treatments were 90.98%, 93.00%, 92.27%, 79.44%, 90.37%, and 90.59%, respectively. The eggshell thickness and cuticle quality results showed that all AA, V, and CA solutions can effectively remove the quail eggshell cuticle, and AA4, V4 and CA4 significantly decreased eggshell thickness (P < 0.05). Microbial activity on the eggshell surface in all acid treatments was reduced significantly at day 0 of incubation (P < 0.05) and that significantly decreased than controlled treatments over the incubation period except AA2 treatment. Egg weight loss was lower for all acid treatments than that of the CND treatment (P < 0.05). There was no clear effect of treatments on chick quality. Hatch time in AA4, V4, and CA4 treatments slightly improved compared with controlled treatments (P > 0.05). There were no significant differences between treatments for chick livability and live weight at the first 21 D of life. Results of the present study indicate that cuticle removal with AA4, V4, or CA4 could effectively decrease the microbial activity on the eggshell surface during the incubation period and improve hatchability of quail hatching eggs without negative effects on hatch time and performance of quail chicks.