High sediment load weakens the effects of nitrogen nutrients on zooplankton diversity in a continental-scale river

Suspended sediment is a major factor driving biodiversity in sediment-laden rivers. However, the composition of aquatic communities and their diversity responses to sediment-nutrient interactions in large-scale sediment-laden rivers are largely unexplored. This study investigated the distribution patterns of zooplankton communities in the main stream of the Yellow River, China. Samples were collected in 41 sampling sections spanning from the river source to the estuary. Based on the sediment concentration of water samples, the study area was divided into a low-sediment region (region 1) and a sediment-laden region (region 2). A total of 164 species were identified in zooplankton samples, with significantly higher species number and density in region 2 compared to region 1. Non-metric multidimensional scaling and analysis of similarities revealed pronounced differences in zooplankton community composition across regions. Despite the prominent contribution of spatial factors to community variations, environmental filtering played a non-negligible role. Nitrogen nutrients emerged as overarching environmental factors shaping zooplankton communities in region 1. In addition to nitrogen nutrients, total suspended solids and turbidity also strongly affected zooplankton communities in region 2. High sediment load weakened the positive effects of nitrogen nutrients on zooplankton diversity. Notably, the sediment effect did not result in species loss, but led to an earlier nitrogen limitation on community diversity. This study provides mechanistic insight into zooplankton community dynamics in a continental-scale sediment-laden river system, unveiling the response patterns of aquatic communities to suspended sediment.

Multidimensional aspects of riverine biodiversity can vary in response to nutrient pollution and environmental dynamics across climatic watersheds

The concurrent impact of anthropogenic and bioclimatic factors on biodiversity is a key focus in macroecological and biogeographical considerations in conservation programs within riverine ecosystems. However, there is still a lack of understanding about how multidimensional alpha and beta diversity measures respond to anthropogenic and bioclimatic drivers. Here, we assess the variations in taxonomic, phylogenetic, and functional alpha and beta diversity of riverine macroinvertebrate communities across different watersheds in China. Our results show significant declines in most facets of alpha diversity across watersheds with low environmental heterogeneity, reflecting the loss of species with unique traits and evolutionary legacies. Both functional and phylogenetic beta-diversity values reveal a decreasing pattern along low heterogeneity environments, whereas taxonomic beta-diversity shows a contrasting pattern, which highlights the influence of microhabitat variation. Moreover, our findings identify nutrient levels, organic matter, water quality indicators, climatic variation, and geographic and habitat characteristics as key determinants of diversity patterns that are indicative of broader water pollution challenges. These factors jointly influence functional and phylogenetic alpha diversity and contribute to spatial homogenization, which is reflected in decreased functional and phylogenetic beta diversity. These trends highlight the complex interactions of chemical and physical factors in shaping biodiversity characteristics across watersheds. Based on the null model, macroinvertebrate communities primarily show random patterns, whereas clustering and overdispersion were sporadically observed in specific communities. We propose that conservation and restoration efforts should be aimed at enhancing aquatic biomes by managing extreme environmental conditions and amplifying spatial spillover, thereby supporting the intrinsic dynamics within natural metasystems and thus preserving the multidimensional aspects of biodiversity.

Looking beyond the surface: Understanding the role of multiple stressors on the eutrophication status of the Albufera Lake (Valencia, Spain)

Aquatic ecosystems face significant impacts from human-related stressors, demanding a deep understanding of their dynamics and interactions for effective management and restoration. The Albufera Lake (Valencia, Spain) presents a complex scenario of multiple interacting stressors affecting its eutrophic status. In this study, we compiled a 50-year dataset and used Generalized Additive Models (GAMs) to analyse the dynamics of the main stressors affecting the ecological status of the Albufera Lake. Then, we assessed their individual and combined effects on eutrophication using chlorophyll-a concentration as a proxy and provided recommendations to enhance water quality. Overall, we found a decrease in annual water inflow and a clear effect of rice cultivation on the seasonal patterns of the Lake's residence time. Our analysis also shows an increase of average water temperature of 2 °C for the last 50 years, and an increase in the frequency and severity of heat waves. In contrast, we found a slightly negative long-term trend in conductivity, despite the occurrence of seasonal peaks in summer. Regarding nutrients, we identified a clear reduction of total phosphorus (from 1.08 mg/L in 1987 to 0.20 mg/L in 2022), while nitrate concentrations have been rather stable. Our results also point at an increase of toxic pressure exerted by organic and inorganic contaminants during the last years, with seasonal toxicity peaks occurring during rice field drainage periods. The main stressors affecting the chlorophyll-a levels were found to be temperature, water scarcity, and nitrate concentration as well as the interactions between temperature and conductivity, conductivity and nitrate, conductivity and water scarcity, and nitrate and total phosphorus. We found that stressor interactions are highly dynamic and result in synergistic and antagonistic effects that vary according to different stressor levels. Finally, our GAM framework points to two potential scenarios: increasing freshwater inflows or deregulating hydrology to allow seawater exchange, which are key for improving the ecological status of the Albufera Lake in the short-term.

Evolution of water quality in rainwater harvesting systems during long-term storage in non-rainy seasons

The development of rainwater utilization strategies has relied on rainwater harvesting (RWH) systems for centuries to alleviate the pressure on water resources. However, there are still significant knowledge gaps regarding the changes in water quality in RWH systems during long-term storage in non-rainy seasons. This study evaluated the water quality processes in RWH systems through static rainwater storage experiments for approximately 60 days. The results revealed that nutrients in rainwater accumulated in sediment during storage. Disturbance and redox conditions at the rainwater-sediment interface contribute to the release of sedimentary facies materials. The rainwater showed distinct DO stratification, with the biochemical reactions of sedimentary facies being the primary factor driving oxygen consumption. ORP and turbidity showed positive correlations with COD (r = 0.582; 0.572), TOC (r = 0.678; 0.681), TN (r = 0.452; 0.439), and NH4+-N (r = 0.502; 0.553) (P < 0.05). The regulation of water quality and extension of the usage cycle were identified as critical factors influenced by DO. In addition, bacteria share similar ecological niche preferences. These findings provide scientific evidence for the high-quality reuse of rainwater in decentralized RWH systems during long-term storage in non-rainy seasons.

Eutrophication increases the similarity of cyanobacterial community features in lakes and reservoirs

Eutrophication of inland waters is a mostly anthropogenic phenomenon impacting aquatic biodiversity worldwide, and might change biotic community structure and ecosystem functions. However, little is known about the patterns of cyanobacterial community variations and changes both on alpha and beta diversity levels in response to eutrophication. Here, we investigated cyanobacterial communities sampled at 140 sites from 59 lakes and reservoirs along a strong eutrophication gradient in eastern China through using CPC-IGS and 16S rRNA gene amplicon sequencing. We found that taxonomic diversity increased, but phylogenetic diversity decreased significantly along the eutrophication gradient. Both niche width and niche overlap of cyanobacteria significantly decreased from low- to high-nutrient waterbodies. Cyanobacterial community distance-decay relationship became weaker from mesotrophic to hypereutrophic waterbodies, while ecological uniqueness (i.e., local contributions to beta diversity) tended to increase in high-nutrient waterbodies. Latitude and longitude were more important in shaping cyanobacterial community structure than other environmental variables. These findings suggest that eutrophication affects alpha and beta diversity of cyanobacterial communities, leading to increasingly similar community structures in lakes and reservoirs with a higher level of eutrophication. Our work highlights how cyanobacterial communities respond to anthropogenic eutrophication and calls for an urgent need to develop conservation and management strategies to control lake eutrophication and protect freshwater biodiversity.

Different responses of taxonomic and functional trait structure of benthic macroinvertebrate assemblages to eutrophication in a large Chinese freshwater lake

Functional trait measures have the potential to represent local habitat conditions and are considered promising tools for biomonitoring and bioassessment programs. Macroinvertebrates are an ecologically significant group in freshwater ecosystems and possess a range of functional traits which are employed to assess ecological quality. Nevertheless, the relationships between macroinvertebrate functional structure and anthropogenic disturbances remain poorly understood. In this study, we conducted a comparison of how functional trait-based and taxonomy-based composition of macroinvertebrate assemblages responded to eutrophication in Lake Taihu, a typical large eutrophic freshwater lake in China. Specifically, we examined both the taxonomy-based and trait-based compositions of benthic macroinvertebrates varied along the eutrophication gradient. Eutrophication was associated with remarkable decreases in the abundance of gastropod taxa and increases in Oligochaeta and Chironomidae. Ten categories belonging to six traits were significantly different among three site groups. The eutrophic and transition sites showed higher abundance of Size2, burrowers, and integument-respiration organisms than macrophytic sites, whereas abundance of Size1, conical-shaped, sprawlers, scrapers, and lung-respiration were higher in macrophytic sites. Both taxonomic (36.8%) and functional compositions (39.8%) of macroinvertebrate assemblages were influenced by the same variables: CODMn and transparency. Our study showed that macroinvertebrate trait-based approaches can be considered a useful supplement to traditional taxonomic approach for biomonitoring programs in freshwater lakes.

Upstream cascade reservoirs drive temporal beta diversity increases through species loss in a dammed river

Changes in the biodiversity of aquatic environments over time and space due to human activities are a topic of theoretical and conservational interest in ecology. Thus, variation in taxonomic beta diversity of the planktonic ciliates community was investigated along a temporal and spatial gradient in two subsystems of a Neotropical floodplain, one impacted by dams (Paraná) and the other free of them along its course (Ivinhema). For the spatial analysis, the Paraná subsystem did not show a significant decrease in beta diversity, presenting a pattern like that observed for the Ivinhema subsystem. Therefore, biotic homogenization was not observed for the ciliate's community downstream of the dams. It was noted that there was a fluctuation in the relevance of the components of beta diversity, regardless of the subsystem analyzed. For the temporal analysis there was a significant change in species composition from the first to the last year investigated, essentially for the subsystem impacted by dams, and that this was determined mainly by species loss. Although spatial beta diversity remained high without a clear process of biotic homogenization, dams promoted remarkable changes in ciliate species composition over the years mainly by continuous loss of species.

Morphological diversity increases with decreasing resources along a zooplankton time series

Biodiversity is studied notably because of its reciprocal relationship with ecosystem functions such as production. Diversity is traditionally described from a taxonomic, genetic or functional point of view but the diversity in organism morphology is seldom explicitly considered, except for body size. We describe morphological diversity of marine zooplankton seasonally and over 12 years using quantitative imaging of weekly plankton samples, in the northwestern Mediterranean Sea. We extract 45 morphological features on greater than 800 000 individuals, which we summarize into four main morphological traits (size, transparency, circularity and shape complexity). In this morphological space, we define objective morphological groups and, from those, compute morphological diversity indices (richness, evenness and divergence) using metrics originally defined for functional diversity. On both time scales, morphological diversity increased when nutritive resources and plankton concentrations were low, thus matching the theoretical reciprocal relationship. Over the long term at least, this diversity increase was not fully attributable to taxonomic diversity changes. The decline in the most common plankton forms and the increase in morphological variance and in extreme morphologies suggest a mechanism akin to specialization under low production, with likely consequences for trophic structure and carbon flux.

Macroinvertebrate Response to Internal Nutrient Loading Increases in Shallow Eutrophic Lakes

In eutrophic lakes, even if external loading is controlled, internal nutrient loading delays the recovery of lake eutrophication. When the input of external pollutants is reduced, the dissolved oxygen environment at the sediment interface improves in a season without algal blooms. As an important part of lake ecosystems, macroinvertebrates are sensitive to hypoxia caused by eutrophication; however, how this change affects macroinvertebrates is still unknown. In this study, we analysed the monitoring data of northern Lake Taihu from 2007 to 2019. After 2007, the external loading of Lake Taihu was relatively stable, but eutrophication began to intensify after 2013, and the nutrients in the sediments also began to decline, which was related to the efficient use of nutrients by algal blooms. The community structure and population density of macroinvertebrates showed different responses in different stages. In particular, the density of oligochaetes and the Shannon-Wiener index showed significant differences in their response to different stages, and their sensitivity to eutrophication was significantly reduced. Under eutrophication conditions dominated by internal loading, frequent hypoxia occurs at the sediment interface only when an algal bloom erupts. When there is no bloom, the probability of sediment hypoxia is significantly reduced under the disturbance of wind. Our results indicate that the current method for evaluating lake eutrophication based on oligochaetes and the Shannon-Wiener diversity index may lose its sensitivity.

Biotic homogenisation and differentiation as directional change in beta diversity: synthesising driver-response relationships to develop conceptual models across ecosystems

Biotic homogenisation is defined as decreasing dissimilarity among ecological assemblages sampled within a given spatial area over time. Biotic differentiation, in turn, is defined as increasing dissimilarity over time. Overall, changes in the spatial dissimilarities among assemblages (termed 'beta diversity') is an increasingly recognised feature of broader biodiversity change in the Anthropocene. Empirical evidence of biotic homogenisation and biotic differentiation remains scattered across different ecosystems. Most meta-analyses quantify the prevalence and direction of change in beta diversity, rather than attempting to identify underlying ecological drivers of such changes. By conceptualising the mechanisms that contribute to decreasing or increasing dissimilarity in the composition of ecological assemblages across space, environmental managers and conservation practitioners can make informed decisions about what interventions may be required to sustain biodiversity and can predict potential biodiversity outcomes of future disturbances. We systematically reviewed and synthesised published empirical evidence for ecological drivers of biotic homogenisation and differentiation across terrestrial, marine, and freshwater realms to derive conceptual models that explain changes in spatial beta diversity. We pursued five key themes in our review: (i) temporal environmental change; (ii) disturbance regime; (iii) connectivity alteration and species redistribution; (iv) habitat change; and (v) biotic and trophic interactions. Our first conceptual model highlights how biotic homogenisation and differentiation can occur as a function of changes in local (alpha) diversity or regional (gamma) diversity, independently of species invasions and losses due to changes in species occurrence among assemblages. Second, the direction and magnitude of change in beta diversity depends on the interaction between spatial variation (patchiness) and temporal variation (synchronicity) of disturbance events. Third, in the context of connectivity and species redistribution, divergent beta diversity outcomes occur as different species have different dispersal characteristics, and the magnitude of beta diversity change associated with species invasions also depends strongly on alpha and gamma diversity prior to species invasion. Fourth, beta diversity is positively linked with spatial environmental variability, such that biotic homogenisation and differentiation occur when environmental heterogeneity decreases or increases, respectively. Fifth, species interactions can influence beta diversity via habitat modification, disease, consumption (trophic dynamics), competition, and by altering ecosystem productivity. Our synthesis highlights the multitude of mechanisms that cause assemblages to be more or less spatially similar in composition (taxonomically, functionally, phylogenetically) through time. We consider that future studies should aim to enhance our collective understanding of ecological systems by clarifying the underlying mechanisms driving homogenisation or differentiation, rather than focusing only on reporting the prevalence and direction of change in beta diversity, per se.

Multiple anthropogenic stressors influence the taxonomic and functional homogenization of macroinvertebrate communities on the mainstream of an urban-agricultural river in China

Biodiversity loss is caused by intensive human activities and threatens human well-being. However, less is known about how the combined effects of multiple stressors on the diversity of internal (alpha diversity) and multidimensional (beta diversity) communities. Here, we conducted a long-term experiment to quantify the contribution of environmental stressors (including water quality, land use, climate factors, and hydrological regimes) to macroinvertebrate communities alpha and beta diversity in the mainstream of the Songhua River, the third largest river in China, from 2012 to 2019. Our results demonstrated that the alpha and beta diversity indices showed a decline during the study period, with the dissimilarity in community composition between sites decreasing significantly, especially in the impacted river sections (upper and midstream). Despite overall improvement in water quality after management intervention, multiple human-caused stressors still have led to biotic homogenization of macroinvertebrate communities in terms of both taxonomic and functional diversities in the past decade. Our study revealed the increased human land use explained an important portion of the variation of diversities, further indirectly promoting biotic homogenization by changing the physical and chemical factors of water quality, ultimately altering assemblage ecological processes. Furthermore, the facets of diversity have distinct response mechanisms to stressors, providing complementary information from the perspective of taxonomy and function to better reflect the ecological changes of communities. Environmental filtering determined taxonomic beta diversity, and functional beta diversity was driven by the joint efforts of stressors and spatial processes. Finally, we proposed that traditional water quality monitoring alone cannot fully reveal the status of river ecological environment protection, and more importantly, we should explore the continuous changes in biodiversity over the long term. Meanwhile, our results also highlight timely control of nutrient input and unreasonable expansion of land use can better curb the ecological degradation of rivers and promote the healthy and sustainable development of floodplain ecosystems.

Climatically promoted taxonomic homogenization of macroinvertebrates in unaffected streams varies along the river continuum

Biotic homogenization appears to be a global consequence of anthropogenic change. However, the underlying environmental factors contributing to homogenization are difficult to identify because their effects usually interact and confound each other. This can be the reason why there is very little evidence on the role of climate warming in homogenization. By analysing macroinvertebrate assemblages in 65 streams that were as close to natural conditions as possible, we avoided the confounding effects of common anthropogenic stressors. This approach resulted in revealing a significant effect of increased temperature (both summer and winter) on changes in macroinvertebrate compositional over the past two decades. However, homogenization was significant only at opposite ends of the river continuum (submontane brooks, low-altitude rivers). Surprisingly, species of native origin predominated overall, increasing in frequency and abundance ("winners"), while only a minority of species declined or disappeared ("losers"). We hypothesise that undisturbed conditions mitigate species declines and thus homogenization, and that the temperature increase has so far been beneficial to most native species. Although we may have only captured a transitional state due to extinction debt, this underscores the importance of maintaining ecological conditions in stream to prevent species loss due to climate change.

Comprehensive analysis of the migration and transformation of nutrients between sediment and overlying water in complex habitat systems

Under the influence of environmental change, disturbance and other external conditions, sediments release internal nutrients to the overlying water and become a contamination source in the lake. Complex habitat systems provide a unique opportunity for determining the influences of environmental changes in lakes. In this study, Baiyangdian Lake (BYDL) was divided into different habitat systems (connected water areas, river courses, reed fields, lotus ponds, fishponds, farmland, and thorps) based on the influence of natural and artificial activities. The physical and chemical properties of overlying water and sediment in different habitat systems were investigated. In addition, statistical analytical methods were used to analyze the relationship between sediment characteristics and overlying water parameters in different habitat systems. The results showed that nitrogen and phosphorus in the overlying water could accumulate in the sediments, while disturbance was one of the main factors affecting the release of nutrients from sediments. Disturbance promoted the suspension of sediments and increased the oxygen content, thereby facilitating the internal release of nutrients. However, there were also some differences in the process of internal release of nutrients between the habitat systems. Nitrogen in the overlying water was closely related to the source of organic matter (r > 0.950), especially in the ponds (including lotus ponds, reed fields, and fishponds), and phosphorus was mainly influenced by turbidity (r > 0.870). In the river course (p = 0.198, n = 26), the disturbance and increase in pH promoted the internal release of nutrients from the sediments (contributions of 35.2 % and 25.1 %, respectively). In the ponds, the aquatic macrophytes reduced the release of nitrogen and phosphorus in sediments. Overall, this study provides more information on the migration and transformation of nutrients between sediment and overlying water in lakes with multiple habitats.

Responses of multiple facets of macroinvertebrate alpha diversity to eutrophication in floodplain lakes

The accelerated eutrophication of freshwater lakes has become an environmental problem worldwide. Increasing numbers of studies highlight the need to incorporate functional and phylogenetic information of species into bioassessment programms, but it is still poorly understood how eutrophication affects multiple diversity facets of freshwater communities. Here, we assessed the responses of taxonomic, phylogenetic and functional diversity of benthic macroinvertebrates to water eutrophication in 33 lakes in the Yangtze River floodplain in China. Our results showed that macroinvertebrate assemblage structure was significantly different among four lake groups (river-connected, macrophyte-dominated, macrophyte-algae transition, and algae-dominated). Three taxonomic, two phylogenetic and two functional diversity indices were significantly different among the lake groups. Except for the increasing trend of Lambda⁺, these metrics showed a clear decreasing trend with increasing levels of eutrophication, with highest values detected in river-connected and macrophyte-dominated lakes, followed by macrophyte-algae transition lakes and algal-dominated lakes. Although differing in the number and identity of key environmental and spatial variables among the explanatory models of different diversity indices, environmental factors (eutrophication-related water quality variables) played more important role than spatial factors in structuring all three facets of alpha diversity. The predominant role of environmental filtering can be attributed to the strong eutrophication gradient across the studied lakes. Among the three diversity facets, functional diversity indices performed best in portraying anthropogenic disturbances, with variations in these indices being solely explained by environmental factors. Spatial factors were mostly weak or negligible in accounting for the variation in functional diversity indices, implying that trait-based indices are robust in portraying anthropogenic eutrophication in floodplain lakes. However, variation in some taxonomic and phylogenetic diversity indices were also affected by spatial factors, indicating that conservation practitioners and environmental managers should use these metrics with caution when providing solutions for addressing eutrophication in floodplain lakes.

Drought and nutrient pollution produce multiple interactive effects in stream ecosystems

Drought and nutrient pollution can affect the dynamics of stream ecosystems in diverse ways. While the individual effects of both stressors are broadly examined in the literature, we still know relatively little about if and how these stressors interact. Here, we performed a mesocosm experiment that explores the compounded effects of seasonal drought via water withdrawals and nutrient pollution (1.0 mg/L of N and 0.1 mg/L of P) on a subset of Ozark stream community fauna and ecosystem processes. We observed biological responses to individual stressors as well as both synergistic and antagonistic stressor interactions. We found that drying negatively affected periphyton assemblages, macroinvertebrate colonization, and leaf litter decomposition in shallow habitats. However, in deep habitats, drought-based increases in fish density caused trophic cascades that released algal communities from grazing pressures; while nutrient enrichment caused bottom-up cascades that influenced periphyton variables and crayfish growth rates. Finally, the combined effects of drought and nutrient enrichment interacted antagonistically to increase survival in longear sunfish; and stressors acted synergistically on grazers causing a trophic cascade that increased periphyton variables. Because stressors can directly and indirectly impact biota—and that the same stressor pairing can act differentially on various portions of the community simultaneously—our broad understanding of individual stressors might not adequately inform our knowledge of multi-stressor systems.

Eutrophication in subtropical lakes reinforces the dominance of balanced-variation component in temporal bacterioplankton community heterogeneity by lessening stochastic processes

Unveiling the rules of bacterioplankton community assembly in anthropogenically disturbed lakes is a crucial issue in aquatic ecology. However, it is unclear how the ecological processes underlying the seasonally driven bacterioplankton community structure respond to varying degrees of lake eutrophication. We therefore collected water samples from three subtropical freshwater lakes with various trophic states (i.e. oligo-mesotrophic, mesotrophic and eutrophic states) on a quarterly basis between 2017 and 2018. To innovatively increase our understanding of bacterioplankton community assembly along the trophic state gradient, the total bacterioplankton community dissimilarity was subdivided into balanced variation in abundances and abundance gradients. The results indicated that balanced-variation component rather than abundance-gradient component dominated the total temporal β-diversity of bacterioplankton communities across all trophic categories. Ecological stochasticity contributed more to the overall bacterioplankton community assembly in the oligo-mesotrophic and mesotrophic lakes than in the eutrophic lake. The reduced bacterioplankton network complexity at the eutrophic level was closely associated with the enhancement of environmental filtering, showing that bacterioplankton communities in eutrophic lakes are likely to be less stable and more vulnerable to water quality degradation. Together, this study offers essential clues for biodiversity conservation in subtropical lakes under future intensified eutrophication.

Eutrophication causes microbial community homogenization via modulating generalist species

Eutrophication substantially influences the community structure of aquatic organisms and has become a major threat to biodiversity. However, whether eutrophication is linked to homogenization of microbial communities and the possible underlying mechanisms are poorly understood. Here, we studied bacterial and fungal communities from water and sediments of 40 shallow lakes in the Yangtze-Huaihe River basin, a representative area characterized by intensifying eutrophication in China, and further examined the beta diversity patterns and underlying mechanisms under eutrophication conditions. Our results indicate that eutrophication generally caused biotic homogenization of bacterial and fungal communities in both habitats showing decreased community variations for the sites with a higher trophic state index (TSI). In the two habitats, community dissimilarities were positively correlated with TSI changes for both taxonomic groups, while the local contribution to beta diversity (LCBD) remarkably declined with increasing TSI for the fungal community. These phenomena were consistent with the pivotal importance of the TSI in statistically accounting for beta diversity of bacterial and fungal communities in both habitats. In addition, we found that physicochemical factors such as water temperature and pH were also important for bacterial and fungal communities in water, while heavy metal elements were important for the communities in sediments. Interestingly, generalist species, rather than specialist species, were revealed to more dominantly affect the variations in beta diversity along the trophic gradient, which were quantified by Bray-Curtis dissimilarity and LCBD. Collectively, our findings reveal the importance of generalist species in contributing to the change of beta diversity of microbial communities along trophic gradients, which have profound implications for a comprehensive understanding of the effects of eutrophication on microbial community.

Effect of multiple agricultural stressors on freshwater ecosystems: The role of community structure, trophic status, and biodiversity-functioning relationships on ecosystem responses

The toxicity and widespread use of agricultural pesticides threaten freshwater biodiversity, but their long-term effects under different nutrient concentrations are poorly understood. We evaluated the single or combined effects of two pesticides (chlorpyrifos and diuron) under different nutrient regimes (mesotrophic and eutrophic) on community structure and ecosystem functions in replicated pond mesocosms. The individual application of nutrients and pesticides affected community composition and species richness. Ecosystem functioning was generally less sensitive to chemical stress than community structure, while eutrophication fostered the dominance of species that are more resilient to pesticides. Stressor interactions were significant at different time points, with late stressor interactions affecting the recovery of community composition. We also found that the correlation between biodiversity and relevant ecosystem functions, such as primary productivity and total ecosystem respiration, can be shifted from positive to negative under particular stress conditions. Our study demonstrates that nutrients enrichment is a key factor influencing the resilience of freshwater ecosystems to multiple stressors and that functional redundancy allows maintaining constant levels of functioning even under high toxic stress pressure.

Relative importance of climate and spatial processes in shaping species composition, functional structure and beta diversity of phytoplankton in a large river

Although metacommunity dynamics of lentic phytoplankton are relatively well-documented, studies on the role of environmental and spatial processes in shaping phytoplankton communities of large rivers are still scarce. Here, we examined six phytoplankton data sets, which were collected in 1978-2017 from large river-scale segments (mean spatial extent 1117 km) in the Danube River. Our aim was to elucidate role of climatic, spatial and temporal predictors in variation of phytoplankton beta diversity using variance partitioning for compositions of species and functional groups sensu Reynolds. We hypothesised that phytoplankton beta diversity (measured as average distance to group centroid) would be positively related to both climatic heterogeneity and spatial extent used as a proxy for dispersal limitation. Additionally, we tested alternative dispersal models to evaluate different spatial processes structuring phytoplankton community. Our results revealed that spatial variables were more important than climatic factors in controlling both species and functional group composition. Climatic heterogeneity showed significant positive relationship with beta diversity. In contrast, there was no significant relationship between beta diversity and spatial extent, suggesting that spatial effect on beta-diversity was attenuated by anthropogenic disturbance. The better performance of non-directional model compared to model of water directionality suggested that spatial dynamics of phytoplankton metacommunity was in large part regulated by differences in the regional species pools. Spatial and temporal variables outperformed environmental (including climatic) factors in explaining phytoplankton metacommunity structure, indicating that phytoplankton exhibited strong biogeographical patterns. Thus, dispersal limitation interfered with species-sorting processes in determining phytoplankton community structure. In conclusion, our findings revealed that the development of a more reliable bioassessment program of the Danube River should be based on separation into basin regions.

Predators mitigate the destabilising effects of heatwaves on multitrophic stream communities

Amidst the global extinction crisis, climate change will expose ecosystems to more frequent and intense extreme climatic events, such as heatwaves. Yet, whether predator species loss-a prevailing characteristic of the extinction crisis-will exacerbate the ecological consequences of extreme climatic events remains largely unknown. Here, we show that the loss of predator species can interact with heatwaves to moderate the compositional stability of ecosystems. We exposed multitrophic stream communities, with and without a dominant predator species, to realistic current and future heatwaves and found that heatwaves destabilised algal communities by homogenising them in space. However, this happened only when the predator was absent. Additional heatwave impacts on multiple aspects of stream communities, including changes to the structure of algal and macroinvertebrate communities, as well as total algal biomass and its temporal variability, were not apparent during heatwaves and emerged only after the heatwaves had passed. Taken together, our results suggest that the ecological consequences of heatwaves can amplify over time as their impacts propagate through biological interaction networks, but the presence of predators can help to buffer such impacts. These findings underscore the importance of conserving trophic structure, and highlight the potential for species extinctions to amplify the effects of climate change and extreme events.

Compensatory dynamics of lotic algae break down nonlinearly with increasing nutrient enrichment

One important mechanism governing the temporal maintenance of biodiversity is asynchrony in co-occurring competitors due to fluctuating environments (i.e. compensatory dynamics). Temporal niche partitioning has evolved in response to predictable oscillations in environmental conditions so that species may offset competition, but we do not yet have a clear understanding of how novel anthropogenic stressors alter seasonal patterns of succession. Many primary producers are nutrient-limited, and enrichment may decrease the importance of environmental fluctuations that govern which species are effective competitors under naturally low nutrient regimes. Consequently, elevated nutrient concentrations may synchronize species responses to seasonality. By studying benthic algal assemblages over two years from 35 streams that spanned a wide gradient of nutrient enrichment, we found that compensatory dynamics characterizing seasonal succession under natural nutrient regimes broke down at relatively low levels of total phosphorus (P) enrichment (~ 25 μg L^-1 ). With increasing P more species were able to coexist at any given time, and seasonal variation in assemblage composition was characterized by synchronous swings in species biovolumes. We also observed much higher instability in assemblage biovolumes with declines in compensatory dynamics, which indicates that anthropogenic alteration of nutrient regimes can affect community stability by changing the dominant mode of seasonal succession. Our findings indicate that compensatory fluctuations of stream algae are driven by seasonality, and provide insight about how nutrient enrichment alters evolved drivers of species coexistence.

Priority effects of stream eutrophication and assembly history on beta diversity across aquatic consumers, decomposers and producers

Priority effects are stochastic processes that consider the influence of the order of arrival of species on community dynamics and structure. We evaluated the short-term effects of stream eutrophication and colonization time in freshwater benthic communities (primary producers - periphytic algae, decomposers - fungi, and consumers - macroinvertebrates) to test whether (i) beta diversity is higher in eutrophic streams due to priority effects driven by stochastic community formation processes (ecological drift or random dispersal), and (ii) in the early stages of colonization, priority effects drive the history of the formation and the initial establishment of the community in the stream, resulting in higher beta diversity. The present study was conducted in situ over 28 days in temperate streams along a trophic gradient, with colonization being evaluated every seven days. The study identified 84 species of alga, 43 families of macroinvertebrates, and 44 species of aquatic fungi. Our results demonstrated that deterministic processes were responsible for the formation of aquatic producers, while priority effects (stochasticity) were more important for the aquatic decomposers and consumers. In the case of the producers, beta diversity was highest in the hypertrophic stream, but did not vary significantly over colonization time. The beta diversity of the decomposers was highest in the hypertrophic stream and in the later stages of succession, due primarily to mechanisms of facilitation. The beta diversity of the consumers was lowest in the hypertrophic stream due primarily to the priority and inhibitory effects of the predominant groups, and highest at seven and 21 days of colonization. As these three taxonomic groups differ in their intrinsic biological characteristics, and in their functional role in the ecosystem, our short-term field study demonstrated that both stochastic and deterministic processes combine to influence the configuration of the community, and that the relative importance of the two processes varies systematically along a trophic gradient.

Homogenization of diatom assemblages is driven by eutrophication in tropical reservoirs

Eutrophication is one of the most widespread causes of biotic homogenization in freshwater ecosystems. Biotic homogenization can be characterized as reductions in local diversity (alpha) and occupation of available niches by more generalist species. Beta diversity is expected to decrease in more homogeneous communities, however, there is no consensus on how it responds to eutrophication. We used a space-for-time approach to analyze the process of biotic homogenization on diatom assemblages in response to eutrophication in tropical reservoirs ranging from oligotrophic to hypereutrophic conditions. Diatom assemblages were analyzed in phytoplankton and surface sediment from 12 reservoirs with different trophic levels. We calculated total beta diversity and turnover and nestedness components and used regressions to analyze their relationships with productivity differences (without distance effects). Total beta diversity had a positive influence of the trophic gradient, whereas turnover was not related to eutrophication. However, we found that eutrophication and lower species richness (alpha diversity) led to increasing rates of the nestedness component. We also observed that the homogenization process was not characterized by invasion of new species, but, on the contrary, by filtering nutrient-rich tolerant species also present in oligo-mesotrophic reservoirs and able to occupy available niches in the eutrophic reservoirs. These findings (increase in nestedness, decrease in alpha diversity, and development of tolerant species) suggest that biotic homogenization is leading to a simplification of diatom assemblages in tropical reservoirs, making assemblages from eutrophic and hypereutrophic reservoirs a subset of assemblages from oligotrophic and mesotrophic ones.

Land cover alteration shifts ecological assembly processes in floodplain lakes: Consequences for fish community dynamics

Habitat degradation is expected to alter community structure and consequently, ecosystem functions including the maintenance of biodiversity. Understanding the underlying abiotic and biotic assembly mechanisms controlling temporal and spatial community structure and patterns is a central issue in biodiversity conservation. In this study, using monthly time series of fish abundance data collected over a three-year period, we compared the temporal community dynamics in natural habitats and poplar plantations in one of the largest river-lake floodplain ecosystems in China, the Dongting Lake. We found a prevailing strong positive species covariance, i.e. species abundance changes in the same way, in all communities that was significantly negatively impacted by higher water nutrient levels. In contrast to species covariance, community stability, which was measured by the average of aggregated abundance divided by temporal standard deviation, was significantly higher in poplar plantations than in natural habitats. The positive species covariance, which was consistent for both wet and dry years and among habitat types, had significantly negative effects on community stability. Furthermore, our results demonstrated that the ecological stochasticity (i.e. community assembly processes generating diversity patterns that are indistinguishable from random chance) was significantly higher in natural sites than in poplar plantations, suggesting that deterministic processes might control the community composition (richness and abundance) at the modified habitat through reducing species synchrony and positive species covariance observed in the natural habitats, leading to significantly lower temporal β-diversity. When combined, our results suggest that habitat modification created environmental conditions for the development of stable fish community in the highly dynamic floodplains, leading to niche-based community with lower temporal β-diversity.

Effects of multiple stressors on the dimensionality of ecological stability

Ecological stability is a multidimensional construct. Investigating multiple stability dimensions is key to understand how ecosystems respond to disturbance. Here, we evaluated the single and combined effects of common agricultural stressors (insecticide, herbicide and nutrients) on four dimensions of stability (resistance, resilience, recovery and invariability) and on the overall dimensionality of stability (DS) using the results of a freshwater mesocosm experiment. Functional recovery and resilience to pesticides were enhanced in nutrient-enriched systems, whereas compositional recovery was generally not achieved. Pesticides did not affect compositional DS, whereas functional DS was significantly increased by the insecticide only in non-enriched systems. Stressor interactions acted non-additively on single stability dimensions as well as on functional DS. Moreover we demonstrate that pesticides can modify the correlation between functional and compositional aspects of stability. Our study shows that different disturbance types, and their interactions, require specific management actions to promote ecosystem stability.

Long-term nitrogen input alters plant and soil bacterial, but not fungal beta diversity in a semiarid grassland

Anthropogenic nitrogen (N) input is known to alter plant and microbial α-diversity, but how N enrichment influences β-diversity of plant and microbial communities remains poorly understood. Using a long-term multilevel N addition experiment in a temperate steppe, we show that plant, soil bacterial and fungal communities exhibited different responses in their β-diversity to N input. Plant β-diversity decreased linearly as N addition increased, as a result of increased directional environmental filtering, where soil environmental properties largely explained variation in plant β-diversity. Soil bacterial β-diversity first increased then decreased with increasing N input, which was best explained by corresponding changes in soil environmental heterogeneity. Soil fungal β-diversity, however, remained largely unchanged across the N gradient, with plant β-diversity, soil environmental properties, and heterogeneity together explaining an insignificant fraction of variation in fungal β-diversity, reflecting the importance of stochastic community assembly. Our study demonstrates the divergent effect of N enrichment on the assembly of plant, soil bacterial and fungal communities, emphasizing the need to examine closely associated fundamental components (i.e., plants and microorganisms) of ecosystems to gain a more complete understanding of ecological consequences of anthropogenic N enrichment.

Key drivers structuring rotifer communities in ponds: insights into an agricultural landscape

Understanding the influence of environmental and spatial factors on the structure of aquatic communities remains a major challenge in community ecology. This study aims to identify main drivers of rotifer abundance and diversity in ponds embedded in an intensive agricultural landscape in Northeast Germany. We studied 42 ponds of glacial origin (kettle holes) covering a wide range of environmental parameters. The predominant factors structuring the rotifer metacommunity shifted from abiotic environmental filtering in spring to unstudied factors in autumn, while spatial factors remained less important. Fertilizer-driven salinization, internal nutrient recycling, primary productivity and sediment phosphorus release were the prevalent biogeochemical processes in the ponds. Both fertilizer-driven salinization and primary productivity negatively affected rotifer alpha diversity, and positively affected beta diversity. This impact was lower in forest ponds than in those surrounded by arable fields or grassland. However, rotifer diversity did not significantly differ among land-use categories. Our results indicate that the long-term impact of intensive agriculture in the region and the associated widespread eutrophication overrides the direct influence of land use on rotifer diversity but point to an indirect effect via fertilizer-driven salinization. Furthermore, this study highlights the role of ponds in enhancing regional biodiversity in agricultural landscapes.

The interaction between spatial variation in habitat heterogeneity and dispersal on biodiversity in a zooplankton metacommunity

It is hypothesized that biodiversity is maintained by interactions at local and regional spatial scales. Many sustainability plans and management practices reflect the need to conserve biodiversity, yet once these plans are implemented, the ecological consequences are not well understood. By learning how management practices affect local environmental factors and dispersal in a region, ecologists and natural resource managers can better understand the implications of management choices. We investigated the interaction of local and regional scale processes in the built environment, where human-impacts are known to influence both. Our goal was to determine how the interaction between spatial variation in habitat heterogeneity in algal management of urban ponds and dispersal shape biodiversity at local and regional spatial scales. A twelve-week mesocosm study was conducted where pond management and dispersal were manipulated to determine how spatial variation in habitat and dispersal from various source pools influence zooplankton metacommunities in urban stormwater ponds. We hypothesized that dispersal from managed or unmanaged source pools will lead to community divergence and local management practices will act as an environmental filter, both reducing beta diversity between managed ponds and driving compositional divergence. Our results suggest that zooplankton dispersal from managed or unmanaged source pools was important to explaining divergence in community composition. Furthermore, local management of algae marginally reduced compositional turnover of zooplankton among ponds but did not lead to significant divergence in community composition. Management practices may act as strong environmental filters by reducing beta diversity between ponds. As hypothesized, source pool constraints led to compositional divergence and local management practices resulted in reduced compositional turnover between ponds. The results of this study suggest that sustainability and management plans may have complex effects on biodiversity both within and across spatial scales.

Response of macroinvertebrate communities to land use and water quality in Wudalianchi Lake

Macroinvertebrate assemblages are structured by a number of abiotic and biotic factors interacting simultaneously. We investigated macroinvertebrate assemblages along gradients of human disturbance and morphometric characteristics in five lakes connected by the same stream. We aimed to assess the relative effects of environmental gradients on macroinvertebrate assemblages and to investigate whether water quality effects on the assemblages were correlated with buffer land use. There were significant differences in macroinvertebrate community compositions among lakes, and our results indicated that oligochaetes (mainly Limnodrilus) and insects (mainly Chironomus) contributed highly to the differences. We used redundancy analysis with variation partitioning to quantify the independent and combined anthropogenic effects of water quality and land use gradients on the macroinvertebrate community. The independent effect of water quality was responsible for 17% of the total variance in macroinvertebrate community composition, the independent effect of buffer land use accounted for 6% of variation, and the combined variation between land use change and water quality accounted for 12%. Our study indicated that both the independent effects of land use and within-lake water quality can explain the influence in macroinvertebrate assemblages, with significant interactions between the two. This is rather important to notice that changes in buffer land use generally may alter nutrient inputs and thus severely affect abiotic conditions encountered by macroinvertebrate. Our study demonstrates that considering buffer zone effects explicitly may be significant in the selection and application of conservation and management strategies.

Hierarchical response of littoral macroinvertebrates to altered hydromorphology and eutrophication

The composition of littoral macroinvertebrate communities in lakes is governed by multiple natural and anthropogenic environmental influences interacting at different spatial scales. Since ecological assessment methods using littoral macroinvertebrates should respond specifically to a single stressor, knowledge on the unique effects of a given stressor is necessary. To effectively disentangle the effects of hydromorphology and trophic state requires analysing macroinvertebrate communities at lake sites with the full range of both stressors. We used a dataset of 98 lakes encompassing the entire gradient of geographical locations, lake types, hydromorphological degradation and trophic states in Central European lakes. We studied the unique and joint effects of hydromorphology and trophic state on macroinvertebrate richness, community composition and the Littoral Invertebrate Multimetric Index based on Composite Sampling (LIMCO). Variation partitioning analyses were conducted to test the importance of hydromorphology relative to trophic state across and within hydromorphological states (natural shorelines, hard and soft shore modifications) and trophic states (oligotrophic to hypertrophic states). At natural, hard and soft modification sites, hydromorphology explained 10, 16 and 19%, respectively, of the average unique variation of diversity, community composition and the LIMCO index, whereas trophic state explained on average 2, 5 and 5%, respectively. Similarly, in low, medium and high trophic state lakes, hydromorphology explained 10, 15 and 7%, respectively, of the average unique variation of diversity, community composition and the LIMCO index, whereas trophic state explained on average 0.3, 3 and 6%, respectively. Our results demonstrate that littoral hydromorphology was a more important driver of macroinvertebrate diversity, community composition and LIMCO than trophic state across hydromorphological states and trophic states. This indicates that multiple stressors in lakes act hierarchically on littoral macroinvertebrate communities and that the hydromorphological degradation of littoral zones is the primary driver for altered communities.

Excess of nitrogen reduces temporal variability of stream diatom assemblages

Nutrient enrichment degrades water quality and threatens aquatic biota. However, our knowledge on (dis)similarities in temporal patterns of biota among sites of varying level of nutrient stress is limited. We addressed this gap by assessing temporal (among seasons) variation in algal biomass, species diversity and composition of diatom assemblages in three streams that differ in nutrient stress, but are otherwise similar and share the same regional species pool. We monitored three riffle sections in each stream bi-weekly from May to October in 2014. Temporal variation in water chemistry and other environmental variables was mainly synchronous among riffles within streams and often also among streams, indicating shared environmental forcing through time. We found significant differences in diatom assemblage composition among streams and, albeit less so, also among riffles within streams. Diatom assemblages in the two nutrient-enriched streams were more similar to each other than to those in the nutrient-poor stream. Taxa richness did not differ consistently among the streams, and did not vary synchronously at any spatial scale. Temporal variation in diatom assemblage composition decreased with increasing DIN:TotP ratio, likely via a negative effect on sensitive taxa while maintaining favorable conditions for certain tolerant taxa, irrespective of season. This relationship weakened but remained significant even after controlling for stochastic effects, suggesting deterministic mechanisms between nutrient levels and diatom assemblage stability. After controlling for stochastic effects temporal variability was best explained by DIN suggesting that excess of nitrogen reduces temporal variability(intra-annual beta diversity) of diatom assemblages. The high temporal variation, and especially the lack of temporal synchrony at the within streams scale, suggests that single sampling at a single site may be insufficient to reliably assess and monitor a complete stream water body. Our results also showed that measures including species identity outperform traditional diversity metrics in detecting nutrient stress in streams.

Flooding and hydrologic connectivity modulate community assembly in a dynamic river-floodplain ecosystem

Braided river floodplains are highly dynamic ecosystems, where aquatic communities are strongly regulated by the hydrologic regime. So far, however, understanding of how flow variation influences assembly mechanisms remains limited. We collected benthic chironomids and oligochaetes over a year across a lateral connectivity gradient in the semi-natural Tagliamento River (Italy). Four bankfull flood events occurred during the study, allowing the assessment of how flooding and hydrologic connectivity mediate the balance between stochastic and deterministic community assembly. While invertebrate density and richness were positively correlated with connectivity, diversity patterns showed no significant correlation. Species turnover through time increased with decreasing connectivity. Contrary to expectations, hydrologic connectivity did not influence the response of community metrics (e.g. diversity, density) to floods. Invertebrate composition was weakly related to connectivity, but changed predictably in response to floods. Multivariate ordinations showed that faunal composition diverged across the waterbodies during stable periods, reflecting differential species sorting across the lateral gradient, but converged again after floods. Stable hydrological periods allowed communities to assemble deterministically with prevalence of non-random beta-diversity and co-occurrence patterns and larger proportion of compositional variation explained by local abiotic features. These signals of deterministic processes declined after flooding events. This occurred despite no apparent evidence of flood-induced homogenisation of habitat conditions. This study is among the first to examine the annual dynamic of aquatic assemblages across a hydrologic connectivity gradient in a natural floodplain. Results highlight how biodiversity can exhibit complex relations with hydrologic connectivity. However, appraisal of the assembly mechanisms through time indicated that flooding shifted the balance from deterministic species sorting across floodplain habitats, towards stochastic processes related to organisms redistribution and the likely resetting of assembly to earlier stages.

Relationships between diatom metrics based on species nutrient traits and agricultural land use

We assessed how diatom metrics were related to different ranges of agricultural land use. Diatom assemblage composition, nutrients, and landscape characteristics were determined at 232 sites in eight agriculturally dominated study areas of the continental United States. Two regional groups based on differences in diatom relations to human disturbance were determined. Changes in diatom species composition were related to nutrients, pH, and conductivity in the eastern study areas (due to more wetlands) and more exclusively to nutrients in the west-central study areas. Homogenization of diatom flora among streams was related to high agricultural disturbance at this transcontinental scale. Species traits were developed separately for the east and west-central study groups and calculated two ways: indicator species analysis for taxa in low and high TN or TP conditions and weighted average partial least squares models of TN and TP concentration. These diatom metrics were significantly related to many indicators of agricultural land use in watersheds, especially percent row crops. Further analysis was conducted on only the west-central region due to its larger sample size. Overall, diatom metrics using species responses to N gradients were better related to agricultural land use than were species responses to P gradients. Most nutrient-based diatom metrics changed greatly in response to low ranges of percent row crops, but only a few high N diatom metrics responded to high row crop conditions. The greater response of diatoms to changes in low agriculture conditions may be due to past diatom evolution occurring when most waters had low nutrient conditions.

Nitrogen addition does not reduce the role of spatial asynchrony in stabilising grassland communities

While nitrogen (N) amendment is known to affect the stability of ecological communities, whether this effect is scale-dependent remains an open question. By conducting a field experiment in a temperate grassland, we found that both plant richness and temporal stability of community biomass increased with spatial scale, but N enrichment reduced richness and stability at the two scales considered. Reduced local-scale stability under N enrichment arose from N-induced reduction in population stability, which was partly attributable to the decline in local species richness, as well as reduction in asynchronous local population dynamics across species. Importantly, N enrichment did not alter spatial asynchrony among local communities, which provided similar spatial insurance effects at the larger scale, regardless of N enrichment levels. These results suggest that spatial variability among local communities, in addition to local diversity, may help stabilise ecosystems at larger spatial scales even in the face of anthropogenic environmental changes.

Substrate degradation and nutrient enrichment structuring macroinvertebrate assemblages in agriculturally dominated Lake Chaohu Basins, China

Rapid agricultural development has induced severe environmental problems to freshwater ecosystems. In this study, we aimed to examine the structure and environmental determinants of macroinvertebrate assemblages in an agriculture dominated Lake Chaohu Basin, China. A cluster analysis of the macroinvertebrate communities identified four groups of sites that were characterized by significantly different macroinvertebrate species. These four groups of sites had concentric spatial distribution patterns that followed the variation in the environmental conditions from the less anthropogenically disturbed headwaters towards the more anthropogenically disturbed lower reaches of the rivers and the Lake Chaohu. Moreover, taxa richness decreased from the headwaters towards the Lake Chaohu. The increasing practice of agriculture has reduced the abundances and richness of pollution sensitive species while opposite effects on pollution tolerant species. The study identified substrate heterogeneity and nutrient concentrations as the key environmental factors regulating the changes in the macroinvertebrate communities. We propose that particular attentions should be paid to reduce the nutrient enrichment and habitat degradation in the Lake Chaohu Basin and similar agriculture dominated basins.

Dynamics and drivers of phytoplankton richness and composition along productivity gradient

The shape of the productivity-richness relationship (PRR) for phytoplankton has been suggested to be unimodal, that is, the richness peaks at intermediate productivity levels. However, the mechanistic understanding for this pattern is still widely debated. In this study, we observed a unimodal PRR within 71 lakes along the Yangtze River encompassing an altitude range of 0-2700m, and an over 2200km distance from the upper reaches to the lower reaches. At low productivity, the competition for resources and regulatory processes jointly affected phytoplankton richness and composition, and their explanatory power depend on the gradient scale of driving factors. The variation of temperature attributing to altitudinal difference explained the majority of the variations of phytoplankton. If the altitude variation in temperature was eliminated, the explanatory power of temperature decreased from 31.7 to 7.6, and the independent effect of each resource and regulatory variable were limited and not decisive. At high productivity, the negative feedback of increased productivity (light limitation) affected the phytoplankton species richness and composition. The light-sensitive species disappeared, low-light-adapted species was retained and the phytoplankton composition gradually became similar with an increase in productivity. The findings contribute to an increased understanding of the mechanisms resulting in a hump-shaped PRR for phytoplankton.

Functional and Taxonomic Differentiation of Macrophyte Assemblages Across the Yangtze River Floodplain Under Human Impacts

Human activities and the consequent extirpations of species have been changing the composition of species assemblages worldwide. These anthropogenic impacts alter not only the richness of assemblages but also the biological dissimilarity among them. One of the main gaps in the assessment of biodiversity change in freshwater ecosystems is our limited understanding regarding how taxonomic and functional facets of macrophyte assemblages respond to human impacts on regional scales. Here, we assess the temporal (before 1970s against after 2000s) changes in taxonomic and functional richness and compositional dissimilarities, partitioned into its turnover and nestedness components, of freshwater macrophyte assemblages across the floodplain lakes of the Yangtze River in China. We found that functional and taxonomic assemblage differentiation occurred simultaneously under increasing human impact, concomitant to a general decrease in functional and taxonomic richness. However, this effect weakened when the historical level of taxonomic dissimilarity among assemblages was high. Macrophyte species with large dispersal range and submersed life form were significantly more susceptible to extirpation. The impact of human activities on differentiation was complex but habitat loss and fishery intensity were consistently the main drivers of assemblage change in these lakes, whereas water quality (i.e., light pollution and nutrient enrichment) had weaker effects. Further, macrophyte taxonomic and functional differentiation was mainly driven by the nestedness component of dissimilarity, accounting for changes in assemblage composition related to changes in species richness independent of species replacement. This result, markedly different from previous studies on freshwater fish assemblages conducted in these lakes, represents a novel contribution toward achieving a more holistic understanding of how human impacts contribute to shape community assemblages in natural ecosystems.

Environmental Characteristics and Anthropogenic Impact Jointly Modify Aquatic Macrophyte Species Diversity

Species richness and spatial variation in community composition (i.e., beta diversity) are key measures of biodiversity. They are largely determined by natural factors, but also increasingly affected by anthropogenic factors. Thus, there is a need for a clear understanding of the human impact on species richness and beta diversity, the underlying mechanisms, and whether human-induced changes can override natural patterns. Here, we dissect the patterns of species richness, community composition and beta diversity in relation to different environmental factors as well as human impact in one framework: aquatic macrophytes in 66 boreal lakes in Eastern Finland. The lakes had been classified as having high, good or moderate status (according to ecological classification of surface waters in Finland) reflecting multifaceted human impact. We used generalized least square models to study the association between different environmental variables (Secchi depth, irregularity of the shoreline, total phosphorus, pH, alkalinity, conductivity) and species richness. We tested the null hypothesis that the observed community composition can be explained by random distribution of species. We used multivariate distance matrix regression to test the effect of each environmental variable on community composition, and distance-based test for homogeneity of multivariate dispersion to test whether lakes classified as high, good or moderate status have different beta diversity. We showed that environmental drivers of species richness and community composition were largely similar, although dependent on the particular life-form group studied. The most important ones were characteristics of water quality (pH, alkalinity, conductivity) and irregularity of the shoreline. Differences in community composition were related to environmental variables independently of species richness. Species richness was higher in lakes with higher levels of human impact. Lakes with different levels of human impact had different community composition. Between-lake beta diversity did not differ in high, good or moderate status groups. However, the variation in environmental variables shaping community composition was larger in lakes with moderate status compared to other lakes. Hence, beta diversity in lakes with moderate status was smaller than what could be expected on the basis of these environmental characteristics. This could be interpreted as homogenization.

Relative roles of spatial processes, natural factors and anthropogenic stressors in structuring a lake macroinvertebrate metacommunity

Studies of aquatic metacommunities have so far been focused almost entirely on relatively isolated systems, such as a set of streams, lakes or ponds. Here, we aimed to quantify the relative importance of spatial processes, natural factors and anthropogenic stressors in structuring of a macroinvertebrate metacommunity within a large, highly-connected shallow lake system. The roles of different drivers were evaluated for the entire metacommunity, 10 trait-based deconstructed metacommunities and four common species by incorporating extensive sampling and a large number of abiotic explanatory variables. Contrary to our expectations, we found that variation in community structure among sites was mostly correlated to spatial and wind-wave variables rather than anthropogenic disturbance factors even though the lake presented strong environmental gradients associated with long-term human pressures. In addition, the relative importance of the three groups of drivers varied slightly among the deconstructed trait matrices (i.e. based on dispersal ability, feeding mode and degree of occurrence). Importantly, the distributions of the most common species showed significant and strong spatial autocorrelation, indicating the prominent role of high dispersal rate for their distributions. These findings suggest that the influences of high dispersal rates and natural disturbance may even override the roles of anthropogenic stressors in metacommunity organization in highly-connected aquatic systems. Hence, we strongly encourage that spatial processes and natural drivers are taken into account in the development of bioassessment approaches in highly-connected aquatic systems.

Loss of predator species, not intermediate consumers, triggers rapid and dramatic extinction cascades

Ecological networks are tightly interconnected, such that loss of a single species can trigger additional species extinctions. Theory predicts that such secondary extinctions are driven primarily by loss of species from intermediate or basal trophic levels. In contrast, most cases of secondary extinctions from natural systems have been attributed to loss of entire top trophic levels. Here, we show that loss of single predator species in isolation can, irrespective of their identity or the presence of other predators, trigger rapid secondary extinction cascades in natural communities far exceeding those generally predicted by theory. In contrast, we did not find any secondary extinctions caused by intermediate consumer loss. A food web model of our experimental system-a marine rocky shore community-could reproduce these results only when biologically likely and plausible nontrophic interactions, based on competition for space and predator-avoidance behaviour, were included. These findings call for a reassessment of the scale and nature of extinction cascades, particularly the inclusion of nontrophic interactions, in forecasts of the future of biodiversity.

Experimental evidence that parasites drive eco-evolutionary feedbacks

Host resistance to parasites is a rapidly evolving trait that can influence how hosts modify ecosystems. Eco-evolutionary feedbacks may develop if the ecosystem effects of host resistance influence selection on subsequent host generations. In a mesocosm experiment, using a recently diverged (<100 generations) pair of lake and stream three-spined sticklebacks, we tested how experimental exposure to a common fish parasite (Gyrodactylus spp.) affects interactions between hosts and their ecosystems in two environmental conditions (low and high nutrients). In both environments, we found that stream sticklebacks were more resistant to Gyrodactylus and had different gene expression profiles than lake sticklebacks. This differential infection led to contrasting effects of sticklebacks on a broad range of ecosystem properties, including zooplankton community structure and nutrient cycling. These ecosystem modifications affected the survival, body condition, and gene expression profiles of a subsequent fish generation. In particular, lake juvenile fish suffered increased mortality in ecosystems previously modified by lake adults, whereas stream fish showed decreased body condition in stream fish-modified ecosystems. Parasites reinforced selection against lake juveniles in lake fish-modified ecosystems, but only under oligotrophic conditions. Overall, our results highlight the overlapping timescales and the interplay of host-parasite and host-ecosystem interactions. We provide experimental evidence that parasites influence host-mediated effects on ecosystems and, thereby, change the likelihood and strength of eco-evolutionary feedbacks.

The role of dispersal mode and habitat specialization for metacommunity structure of shallow beach invertebrates

Metacommunity ecology recognizes the interplay between local and regional patterns in contributing to spatial variation in community structure. In aquatic systems, the relative importance of such patterns depends mainly on the potential connectivity of the specific system. Thus, connectivity is expected to increase in relation to the degree of water movement, and to depend on the specific traits of the study organism. We examined the role of environmental and spatial factors in structuring benthic communities from a highly connected shallow beach network using a metacommunity approach. Both factors contributed to a varying degree to the structure of the local communities suggesting that environmental filters and dispersal-related mechanisms played key roles in determining abundance patterns. We categorized benthic taxa according to their dispersal mode (passive vs. active) and habitat specialization (generalist vs. specialist) to understand the relative importance of environment and dispersal related processes for shallow beach metacommunities. Passive dispersers were predicted by a combination of environmental and spatial factors, whereas active dispersers were not spatially structured and responded only to local environmental factors. Generalists were predicted primarily by spatial factors, while specialists were only predicted by local environmental factors. The results suggest that the role of the spatial component in metacommunity organization is greater in open coastal waters, such as shallow beaches, compared to less-connected environmentally controlled aquatic systems. Our results also reveal a strong environmental role in structuring the benthic metacommunity of shallow beaches. Specifically, we highlight the sensitivity of shallow beach macrofauna to environmental factors related to eutrophication proxies.

Depth-related response of macroinvertebrates to the reversal of eutrophication in a Mediterranean lake: Implications for ecological assessment

A better management of nutrient inflows into lakes has led to an improvement in their conditions (i.e. reversal of eutrophication) and the effects of this on macroinvertebrate communities that inhabit different lake-depth zones is largely unknown. This paper reports a comparison of macroinvertebrate communities living in the eulittoral, infralittoral and sublittoral/profundal zones of Lake Nemi (Central Italy) before and after its natural recovery from eutrophication following the deviation of domestic wastewater. The infralittoral zone responded more rapidly than the other two depth-zones to the improved ecological conditions, as shown by larger differences in community composition between the two periods. In the eulittoral sand, the combined effects of hydromorphological pressures and reversal of eutrophication hindered the biotic response. In the eulittoral and infralittoral zones, typical taxa of mesotrophic waters appeared or increased their abundances after the eutrophication reversal. Benthic invertebrate response was slower in the sublittoral/profundal zone due to deoxygenation that continued to prevail in the deepest area of the lake during summer. However, both tolerant and more sensitive taxa were collected there for the first time. After the reversal of eutrophication, the percentage of molluscan+large crustaceans increased in the infralittoral zone, whereas the oligochaete/chironomid ratio decreased in both sublittoral/profundal and infralittoral zones. Functional feeding metrics (percentages of filter-feeders, collector-gatherers, miners and scrapers/grazers) differently tracked the reversal of eutrophication in the three depth-zones probably according to the effects of the reduction of nutrients on food-web structure influencing macroinvertebrates. Biological Monitoring Working Party (BMWP) and the Average Score Per Taxon (ASPT) seemed to respond to eutrophication reversal only in the sublittoral/profundal zone, where deoxygenation plays a major role as a structuring agent of the community. Our results suggest that the effects of reversal of eutrophication can be better assessed by examining the response of the communities belonging to each zone individually.

Warming and nutrient enrichment in combination increase stochasticity and beta diversity of bacterioplankton assemblages across freshwater mesocosms

The current climate warming and eutrophication are known to interactively threaten freshwater biodiversity; however, the interactive effects on lacustrine bacterioplankton diversity remain to be determined. Here, we analyzed the spring bacterioplankton community composition (BCC) in 24 outdoor, flow-through mesocosms (mimicking shallow lake environments) under 3 temperature scenarios and 2 nutrient regimes. Our results revealed that neither long-term warming (8.5 years) nor nutrient enrichment had significant effects on bacterioplankton alpha diversity, whereas long-term enhanced warming (elevated 50% above the IPCC A2 climate scenario) and nutrient enrichment in combination increased bacterioplankton beta diversity. We also found that BCC shifted significantly under enhanced warming and nutrient-enriched conditions towards decreased relative abundances of Actinobacteria, Bacteroidetes and Betaproteobacteria, whereas the percentages of Cyanobacteria, total rare phyla and unclassified phyla significantly increased. Null-model tests indicated that deterministic processes played a more important role than stochastic processes in determining BCC. However, the relative importance of stochasticity, primarily ecological drift, was enhanced and contributed to the increased beta diversity of BCC under enhanced warming and nutrient-enriched conditions. Overall, our study suggests that the synergetic effects of warming and nutrient enrichment may result in high variability in the composition of bacterioplankton communities in lacustrine water bodies.