1
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Savage JDT, Moore CM. How do host population dynamics impact Lyme disease risk dynamics in theoretical models? PLoS One 2024; 19:e0302874. [PMID: 38722910 PMCID: PMC11081252 DOI: 10.1371/journal.pone.0302874] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2023] [Accepted: 04/15/2024] [Indexed: 05/13/2024] Open
Abstract
Lyme disease is the most common wildlife-to-human transmitted disease reported in North America. The study of this disease requires an understanding of the ecology of the complex communities of ticks and host species involved in harboring and transmitting this disease. Much of the ecology of this system is well understood, such as the life cycle of ticks, and how hosts are able to support tick populations and serve as disease reservoirs, but there is much to be explored about how the population dynamics of different host species and communities impact disease risk to humans. In this study, we construct a stage-structured, empirically-informed model with host dynamics to investigate how host population dynamics can affect disease risk to humans. The model describes a tick population and a simplified community of three host species, where primary nymph host populations are made to fluctuate on an annual basis, as commonly observed in host populations. We tested the model under different environmental conditions to examine the effect of environment on the interactions of host dynamics and disease risk. Results show that allowing for host dynamics in the model reduces mean nymphal infection prevalence and increases the maximum annual prevalence of nymphal infection and the density of infected nymphs. Effects of host dynamics on disease measures of nymphal infection prevalence were nonlinear and patterns in the effect of dynamics on amplitude in nymphal infection prevalence varied across environmental conditions. These results highlight the importance of further study of the effect of community dynamics on disease risk. This will involve the construction of further theoretical models and collection of robust field data to inform these models. With a more complete understanding of disease dynamics we can begin to better determine how to predict and manage disease risk using these models.
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Affiliation(s)
- Joseph D. T. Savage
- Biology Department, Colby College, Waterville, Maine, United States of America
- Department of Geography, Graduate Program in Ecology, Evolution, Environment, and Society, Dartmouth College, Hanover, New Hampshire, United States of America
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2
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Johnson PTJ, Stewart Merrill TE, Dean AD, Fenton A. Diverging effects of host density and richness across biological scales drive diversity-disease outcomes. Nat Commun 2024; 15:1937. [PMID: 38431719 PMCID: PMC10908850 DOI: 10.1038/s41467-024-46091-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 02/14/2024] [Indexed: 03/05/2024] Open
Abstract
Understanding how biodiversity affects pathogen transmission remains an unresolved question due to the challenges in testing potential mechanisms in natural systems and how these mechanisms vary across biological scales. By quantifying transmission of an entire guild of parasites (larval trematodes) within 902 amphibian host communities, we show that the community-level drivers of infection depend critically on biological scale. At the individual host scale, increases in host richness led to fewer parasites per host for all parasite taxa, with no effect of host or predator densities. At the host community scale, however, the inhibitory effects of richness were counteracted by associated increases in total host density, leading to no overall change in parasite densities. Mechanistically, we find that while average host competence declined with increasing host richness, total community competence remained stable due to additive assembly patterns. These results help reconcile disease-diversity debates by empirically disentangling the roles of alternative ecological drivers of parasite transmission and how such effects depend on biological scale.
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Affiliation(s)
- Pieter T J Johnson
- Ecology and Evolutionary Biology, University of Colorado, Boulder, CO, USA.
| | - Tara E Stewart Merrill
- Ecology and Evolutionary Biology, University of Colorado, Boulder, CO, USA
- Coastal and Marine Laboratory, Florida State University, St. Teresa, FL, USA
| | - Andrew D Dean
- Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
| | - Andy Fenton
- Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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3
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Ferraguti M, Magallanes S, Mora-Rubio C, Bravo-Barriga D, Marzal A, Hernandez-Caballero I, Aguilera-Sepúlveda P, Llorente F, Pérez-Ramírez E, Guerrero-Carvajal F, Jiménez-Clavero MÁ, Frontera E, Ortiz JA, de Lope F. Implications of migratory and exotic birds and the mosquito community on West Nile virus transmission. Infect Dis (Lond) 2024; 56:206-219. [PMID: 38160682 DOI: 10.1080/23744235.2023.2288614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 11/23/2023] [Indexed: 01/03/2024] Open
Abstract
BACKGROUND Vector-borne diseases like West Nile virus (WNV) pose a global health challenge, with rising incidence and distribution. Culex mosquitoes are crucial WNV vectors. Avian species composition and bird community diversity, along with vector communities, influence WNV transmission patterns. However, limited knowledge exists on their impact in southwestern Spain, an area with active WNV circulation in wild birds, mosquitoes, and humans. METHODS To address this, we conducted a comprehensive study investigating the contributions of migratory and exotic bird species to WNV transmission and the influence of mosquito community composition. RESULTS Analysing 1194 serum samples from 44 avian species, we detected WNV antibodies in 32 samples from 11 species, four for the first time in Europe. Migratory birds had higher WNV exposure likelihood than native and exotic species, and higher phylogenetic diversity in bird communities correlated with lower exposure rates. Moreover, in 5859 female mosquitoes belonging to 12 species, we identified WNV competent vectors like Cx. pipiens s.l. and the Univittatus subgroup. Birds with WNV antibodies were positively associated with competent vector abundance, but negatively with overall mosquito species richness. CONCLUSIONS These findings highlight the complex interactions between bird species, their phylogenetics, and mosquito vectors in WNV transmission. Understanding these dynamics will help to implement effective disease control strategies in southwestern Spain.
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Affiliation(s)
- Martina Ferraguti
- Estación Biológica de Doñana (EBD), CSIC, Departamento de Biología de la Conservación y Cambio Global, Seville, Spain
- Universidad de Extremadura, Facultad de Biología, Departamento de Anatomía, Biología Celular y Zoología, Badajoz, Spain
- Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Madrid, Spain
| | - Sergio Magallanes
- Estación Biológica de Doñana (EBD), CSIC, Departamento de Biología de la Conservación y Cambio Global, Seville, Spain
- Universidad de Extremadura, Facultad de Biología, Departamento de Anatomía, Biología Celular y Zoología, Badajoz, Spain
- Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Madrid, Spain
| | - Carlos Mora-Rubio
- Universidad de Extremadura, Facultad de Biología, Departamento de Anatomía, Biología Celular y Zoología, Badajoz, Spain
| | - Daniel Bravo-Barriga
- Universidad de Córdoba, Departamento de Sanidad Animal, Grupo de Investigación en Zoonosis y Sanidad Animal (GISAZ), UIC Zoonosis y Enfermedades Emergentes ENZOEM, Córdoba, Spain
- Universidad de Extremadura, Facultad de Veterinaria, Departamento de Sanidad Animal, Parasitología, Cáceres, Spain
| | - Alfonso Marzal
- Universidad de Extremadura, Facultad de Biología, Departamento de Anatomía, Biología Celular y Zoología, Badajoz, Spain
- Universidad Nacional de San Martín, Grupo de Investigaciones en Fauna Silvestre, Tarapoto, Perú
| | - Irene Hernandez-Caballero
- Universidad de Extremadura, Facultad de Biología, Departamento de Anatomía, Biología Celular y Zoología, Badajoz, Spain
| | | | - Francisco Llorente
- Centro de Investigación en Sanidad Animal (CISA-INIA), CSIC, Valdeolmos, Spain
| | - Elisa Pérez-Ramírez
- Centro de Investigación en Sanidad Animal (CISA-INIA), CSIC, Valdeolmos, Spain
| | | | - Miguel Ángel Jiménez-Clavero
- Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Madrid, Spain
- Centro de Investigación en Sanidad Animal (CISA-INIA), CSIC, Valdeolmos, Spain
| | - Eva Frontera
- Universidad Nacional de San Martín, Grupo de Investigaciones en Fauna Silvestre, Tarapoto, Perú
| | | | - Florentino de Lope
- Universidad de Extremadura, Facultad de Biología, Departamento de Anatomía, Biología Celular y Zoología, Badajoz, Spain
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4
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Chen L, Tan Z, Kong P, Zhou Y, Zhou L. Impact of vector richness on the risk of vector-borne disease: The role of vector competence. Ecol Evol 2024; 14:e11082. [PMID: 38435018 PMCID: PMC10905232 DOI: 10.1002/ece3.11082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 12/10/2023] [Accepted: 01/09/2024] [Indexed: 03/05/2024] Open
Abstract
A central goal of disease ecology is to identify the factors that drive the spread of infectious diseases. Changes in vector richness can have complex effects on disease risk, but little is known about the role of vector competence in the relationship between vector richness and disease risk. In this study, we firstly investigated the combined effects of vector competence, interspecific competition, and feeding interference on disease risk through a two-vector, one-host SIR-SI model, and obtained threshold conditions for the occurrence of dilution and amplification effects. Secondly, we extended the above model to the case of N vectors and assumed that all vectors were homogeneous to obtain analytic expressions for disease risk. It was found that in the two-vector model, disease risk declined more rapidly as interspecific competition of the high-competence vector increased. When vector richness increases, the positive effects of adding a high-competence vector species on disease transmission may outweigh the negative effects of feeding interference due to increased vector richness, making an amplification effect more likely to occur. While the addition of a highly competitive vector species may exacerbate the negative effects of feeding interference, making a dilution effect more likely to occur. In the N-vector model, the effect of increased vector richness on disease risk was fully driven by the strength of feeding interference and interspecific competition, and changes in vector competence only quantitatively but not qualitatively altered the vector richness-disease risk relationship. This work clarifies the role of vector competence in the relationship between vector richness and disease risk and provides a new perspective for studying the diversity-disease relationship. It also provides theoretical guidance for vector management and disease prevention strategies.
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Affiliation(s)
- Lifan Chen
- School of Arts and SciencesShanghai University of Medicine and Health SciencesShanghaiChina
| | - Zhiying Tan
- School of Health Science and EngineeringUniversity of Shanghai for Science and TechnologyShanghaiChina
| | - Ping Kong
- School of Arts and SciencesShanghai University of Medicine and Health SciencesShanghaiChina
| | - Yanli Zhou
- School of Arts and SciencesShanghai University of Medicine and Health SciencesShanghaiChina
| | - Liang Zhou
- Collaborative Innovation Center for BiomedicineShanghai University of Medicine and Health SciencesShanghaiChina
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5
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Wang G, Burrill HM, Podzikowski LY, Eppinga MB, Zhang F, Zhang J, Schultz PA, Bever JD. Dilution of specialist pathogens drives productivity benefits from diversity in plant mixtures. Nat Commun 2023; 14:8417. [PMID: 38110413 PMCID: PMC10728191 DOI: 10.1038/s41467-023-44253-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Accepted: 12/05/2023] [Indexed: 12/20/2023] Open
Abstract
Productivity benefits from diversity can arise when compatible pathogen hosts are buffered by unrelated neighbors, diluting pathogen impacts. However, the generality of pathogen dilution has been controversial and rarely tested within biodiversity manipulations. Here, we test whether soil pathogen dilution generates diversity- productivity relationships using a field biodiversity-manipulation experiment, greenhouse assays, and feedback modeling. We find that the accumulation of specialist pathogens in monocultures decreases host plant yields and that pathogen dilution predicts plant productivity gains derived from diversity. Pathogen specialization predicts the strength of the negative feedback between plant species in greenhouse assays. These feedbacks significantly predict the overyielding measured in the field the following year. This relationship strengthens when accounting for the expected dilution of pathogens in mixtures. Using a feedback model, we corroborate that pathogen dilution drives overyielding. Combined empirical and theoretical evidence indicate that specialist pathogen dilution generates overyielding and suggests that the risk of losing productivity benefits from diversity may be highest where environmental change decouples plant-microbe interactions.
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Affiliation(s)
- Guangzhou Wang
- State Key Laboratory of Nutrient Use and Management (SKL-NUM), College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, 100193, Beijing, People's Republic of China.
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, 66045, USA.
| | - Haley M Burrill
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, 66045, USA
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, 66045, USA
- The Institute of Ecology and Evolution, University of Oregon, Eugene, OR, 97403, USA
| | - Laura Y Podzikowski
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, 66045, USA
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, 66045, USA
| | - Maarten B Eppinga
- Department of Geography, University of Zurich, Winterthurerstrasse 190, 8057, Zürich, Switzerland
| | - Fusuo Zhang
- State Key Laboratory of Nutrient Use and Management (SKL-NUM), College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, 100193, Beijing, People's Republic of China
| | - Junling Zhang
- State Key Laboratory of Nutrient Use and Management (SKL-NUM), College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, 100193, Beijing, People's Republic of China
| | - Peggy A Schultz
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, 66045, USA
- Environmental Studies Program, University of Kansas, Lawrence, KS, 66045, USA
| | - James D Bever
- Kansas Biological Survey and Center for Ecological Research, University of Kansas, Lawrence, KS, 66045, USA.
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, 66045, USA.
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6
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Hu B, Han S, He H. Effect of epidemic diseases on wild animal conservation. Integr Zool 2023; 18:963-980. [PMID: 37202360 DOI: 10.1111/1749-4877.12720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Under the background of global species extinction, the impact of epidemic diseases on wild animal protection is increasingly prominent. Here, we review and synthesize the literature on this topic, and discuss the relationship between diseases and biodiversity. Diseases usually reduce species diversity by decreasing or extinction of species populations, but also accelerate species evolution and promote species diversity. At the same time, species diversity can regulate disease outbreaks through dilution or amplification effects. The synergistic effect of human activities and global change is emphasized, which further aggravates the complex relationship between biodiversity and diseases. Finally, we emphasize the importance of active surveillance of wild animal diseases, which can protect wild animals from potential diseases, maintain population size and genetic variation, and reduce the damage of diseases to the balance of the whole ecosystem and human health. Therefore, we suggest that a background survey of wild animal populations and their pathogens should be carried out to assess the impact of potential outbreaks on the population or species level. The mechanism of dilution and amplification effect between species diversity and diseases of wild animals should be further studied to provide a theoretical basis and technical support for human intervention measures to change biodiversity. Most importantly, we should closely combine the protection of wild animals with the establishment of an active surveillance, prevention, and control system for wild animal epidemics, in an effort to achieve a win-win situation between wild animal protection and disease control.
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Affiliation(s)
- Bin Hu
- National Research Center for Wildlife-Borne Diseases, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Shuyi Han
- National Research Center for Wildlife-Borne Diseases, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Hongxuan He
- National Research Center for Wildlife-Borne Diseases, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
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7
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Millien V, Leo SST, Turney S, Gonzalez A. It's about time: small mammal communities and Lyme disease emergence. Sci Rep 2023; 13:14513. [PMID: 37667029 PMCID: PMC10477272 DOI: 10.1038/s41598-023-41901-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Accepted: 08/31/2023] [Indexed: 09/06/2023] Open
Abstract
Theory predicts that biodiversity changes due to climate warming can mediate the rate of disease emergence. The mechanisms linking biodiversity-disease relationships have been described both theoretically and empirically but remain poorly understood. We investigated the relations between host diversity and abundance and Lyme disease risk in southern Quebec, a region where Lyme disease is rapidly emerging. We found that both the abundance of small mammal hosts and the relative abundance of the tick's natural host, the white-footed mouse (Peromyscus leucopus), influenced measures of disease risk in tick vectors (Borrelia burgdorferi infection abundance and prevalence in tick vectors). Our results suggest that the increase in Lyme disease risk is modulated by regional processes involving the abundance and composition of small mammal assemblages. However, the nature and strength of these relationships was dependent both on time and geographic area. The strong effect of P. leucopus abundance on disease risk we report here is of significant concern, as this competent host is predicted to increase in abundance and occurrence in the region, with the northern shift in the range of North American species under climate warming.
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Affiliation(s)
- V Millien
- Redpath Museum, McGill University, Montréal, QC, H3A 0C4, Canada.
- Department of Biology, McGill University, Montréal, QC, H3A 1B1, Canada.
| | - S S T Leo
- Redpath Museum, McGill University, Montréal, QC, H3A 0C4, Canada
- Department of Biology, McGill University, Montréal, QC, H3A 1B1, Canada
| | - S Turney
- Redpath Museum, McGill University, Montréal, QC, H3A 0C4, Canada
- Department of Biology, McGill University, Montréal, QC, H3A 1B1, Canada
| | - A Gonzalez
- Department of Biology, McGill University, Montréal, QC, H3A 1B1, Canada
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8
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Belo VS, Bruhn FRP, Barbosa DS, Câmara DCP, Simões TC, Buzanovsky LP, Duarte AGS, de Melo SN, Cardoso DT, Donato LE, Maia-Elkhoury ANS, Werneck GL. Temporal patterns, spatial risks, and characteristics of tegumentary leishmaniasis in Brazil in the first twenty years of the 21st Century. PLoS Negl Trop Dis 2023; 17:e0011405. [PMID: 37285388 DOI: 10.1371/journal.pntd.0011405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 05/22/2023] [Indexed: 06/09/2023] Open
Abstract
BACKGROUND Tegumentary leishmaniasis (TL) is a significant public health issue in Brazil. The present ecological study describes the clinical and epidemiological characteristics of TL cases reported in the country, and analyzes the spatial and temporal patterns of the incidences and risks of occurrence across the five geopolitical regions and 27 federative units. METHODOLOGY/PRINCIPAL FINDINGS Data regarding new cases of TL notified between 2001 and 2020 were obtained from the Information System for Notifiable Diseases of the Brazilian Ministry of Health. Joinpoint and spatial and temporal generalized additive models were used to establish trends in the evolution of TL during the target period. The incidence rate for the entire period was 226.41 cases/100,000 inhabitants. All regions of Brazil showed trends of decreasing incidence rates, albeit with fluctuations at specific times, with the exception of the Southeast where rates have increased since 2014, most particularly in Minas Gerais state. The disease was concentrated predominantly in the North region, with Acre state leading the incidence rank in the whole country, followed by Mato Grosso (Midwest), Maranhão and Bahia (Northeast) states. The spatial distribution of the risk of TL occurrence in relation to the annual averages was relatively stable throughout the period. The cutaneous form of TL was predominant and cases most frequently occurred in rural areas and among men of working age. The ages of individuals contracting TL tended to increase during the time series. Finally, the proportion of confirmations by laboratory tests was lower in the Northeast. CONCLUSION/SIGNIFICANCE TL shows a declining trend in Brazil, but its widespread occurrence and the presence of areas with increasing incidence rates demonstrate the persistent relevance of this disease and the need for constant monitoring. Our findings reinforce the importance of temporal and spatial tools in epidemiologic surveillance routines and are valuable for targeting preventive and control actions.
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Affiliation(s)
- Vinícius Silva Belo
- Campus Centro-Oeste Dona Lindu, Universidade Federal de São João del-Rei, Divinópolis, Minas Gerais, Brazil
| | - Fábio Raphael Pascoti Bruhn
- Departamento de Veterinária Preventiva, Faculdade de Veterinária, Universidade Federal de Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | - David Soeiro Barbosa
- Departamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Daniel Cardoso Portela Câmara
- Laboratório de Imunologia Viral, Instituto Oswaldo Cruz, Fundação Oswaldo Cruz, Rio de Janeiro, Rio de Janeiro, Rio de Janeiro, Brazil
| | - Taynãna César Simões
- Instituto René Rachou, Fundação Oswaldo Cruz, Belo Horizonte, Minas Gerais, Brazil
| | - Lia Puppim Buzanovsky
- Centro Pan-Americano de Febre Aftosa, Organização Pan-Americana da Saúde, Rio de Janeiro, Rio de Janeiro, Brazil
- Organização Pan-Americana da Saúde, Rio de Janeiro, Rio de Janeiro, Brazil
| | - Anna Gabryela Sousa Duarte
- Campus Centro-Oeste Dona Lindu, Universidade Federal de São João del-Rei, Divinópolis, Minas Gerais, Brazil
| | - Saulo Nascimento de Melo
- Campus Centro-Oeste Dona Lindu, Universidade Federal de São João del-Rei, Divinópolis, Minas Gerais, Brazil
| | - Diogo Tavares Cardoso
- Departamento de Parasitologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | | | | | - Guilherme Loureiro Werneck
- Departamento de Epidemiologia, Instituto de Medicina Social, Universidade do Estado do Rio de Janeiro, Rio de Janeiro, Rio de Janeiro, Brazil
- Instituto de Estudos em Saúde Coletiva, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Rio de Janeiro, Brazil
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9
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Levi T, Massey AL. Teasing apart the dilution effect by combining DNA metabarcoding and statistical modelling. Mol Ecol 2023; 32:1814-1816. [PMID: 36846962 DOI: 10.1111/mec.16906] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Revised: 02/22/2023] [Accepted: 02/24/2023] [Indexed: 03/01/2023]
Affiliation(s)
- Taal Levi
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, Corvallis, Oregon, USA
| | - Aimee L Massey
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, Corvallis, Oregon, USA
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10
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Fearon ML, Wood CL, Tibbetts EA. Habitat quality influences pollinator pathogen prevalence through both habitat-disease and biodiversity-disease pathways. Ecology 2023; 104:e3933. [PMID: 36448518 PMCID: PMC10078577 DOI: 10.1002/ecy.3933] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Revised: 09/29/2022] [Accepted: 10/20/2022] [Indexed: 12/03/2022]
Abstract
The dilution effect hypothesis posits that increasing biodiversity reduces infectious disease transmission. Here, we propose that habitat quality might modulate this negative biodiversity-disease relationship. Habitat may influence pathogen prevalence directly by affecting host traits like nutrition and immune response (we coined the term "habitat-disease relationship" to describe this phenomenon) or indirectly by changing host biodiversity (biodiversity-disease relationship). We used a path model to test the relative strength of links between habitat, biodiversity, and pathogen prevalence in a pollinator-virus system. High-quality habitat metrics were directly associated with viral prevalence, providing evidence for a habitat-disease relationship. However, the strength and direction of specific habitat effects on viral prevalence varied based on the characteristics of the habitat, host, and pathogen. In general, more natural area and richness of land-cover types were directly associated with increased viral prevalence, whereas greater floral density was associated with reduced viral prevalence. More natural habitat was also indirectly associated with reduced prevalence of two key viruses (black queen cell virus and deformed wing virus) via increased pollinator species richness, providing evidence for a habitat-mediated dilution effect on viral prevalence. Biodiversity-disease relationships varied across viruses, with the prevalence of sacbrood virus not being associated with any habitat quality or pollinator community metrics. Across all viruses and hosts, habitat-disease and biodiversity-disease paths had effects of similar magnitude on viral prevalence. Therefore, habitat quality is a key driver of variation in pathogen prevalence among communities via both direct habitat-disease and indirect biodiversity-disease pathways, though the specific patterns varied among different viruses and host species. Critically, habitat-disease relationships could either contribute to or obscure dilution effects in natural systems depending on the relative strength and direction of the habitat-disease and biodiversity-disease pathways in that host-pathogen system. Therefore, habitat may be an important driver in the complex interactions between hosts and pathogens.
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Affiliation(s)
- Michelle L Fearon
- Department of Ecology & Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA
| | - Chelsea L Wood
- School of Aquatic and Fishery Sciences, University of Washington, Seattle, Washington, USA
| | - Elizabeth A Tibbetts
- Department of Ecology & Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA
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11
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How to use natural history collections to resurrect information on historical parasite abundances. J Helminthol 2023; 97:e6. [PMID: 36633512 DOI: 10.1017/s0022149x2200075x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Many of the most contentious questions that concern the ecology of helminths could be resolved with data on helminth abundance over the past few decades or centuries, but unfortunately these data are rare. A new sub-discipline - the historical ecology of parasitism - is resurrecting long-term data on the abundance of parasites, an advancement facilitated by the use of biological natural history collections. Because the world's museums hold billions of suitable specimens collected over more than a century, these potential parasitological datasets are broad in scope and finely resolved in taxonomic, temporal and spatial dimensions. Here, we set out best practices for the extraction of parasitological information from natural history collections, including how to conceive of a project, how to select specimens, how to engage curators and receive permission for proposed projects, standard operating protocols for dissections and how to manage data. Our hope is that other helminthologists will use this paper as a reference to expand their own research programmes along the dimension of time.
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12
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Wang YXG, Matson KD, Prins HHT, Xu Y, Huang ZYX, de Boer WF. Risk factors for Lyme disease: A scale-dependent effect of host species diversity and a consistent negative effect of host phylogenetic diversity. Ticks Tick Borne Dis 2023; 14:102073. [PMID: 36345067 DOI: 10.1016/j.ttbdis.2022.102073] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Revised: 10/13/2022] [Accepted: 10/28/2022] [Indexed: 11/06/2022]
Abstract
Biodiversity can influence disease risk. One example of a diversity-disease relationship is the dilution effect, which suggests higher host species diversity (often indexed by species richness) reduces disease risk. While numerous studies support the dilution effect, its generality remains controversial. Most studies of diversity-disease relationships have overlooked the potential importance of phylogenetic diversity. Furthermore, most studies have tested diversity-disease relationships at one spatial scale, even though such relationships are likely scale dependent. Using Lyme disease as a model system, we investigated the effects of host species richness and phylogenetic relatedness on the number of reported Lyme disease cases in humans in the U.S.A. at two spatial scales (the county level and the state level) using piecewise structural equation modelling. We also accounted for relevant climatic and habitat-related factors and tested their correlations with the number of Lyme disease cases. We found that species assemblages with more related species (i.e., host species in the order Rodentia) were associated with more Lyme disease cases in humans. Host species richness correlated negatively with the number of Lyme disease cases at the state level (i.e., a dilution effect), a pattern that might be explained by the higher number of reservoir-incompetent species at high levels of species richness at this larger spatial scale. In contrast, a positive correlation was found between species richness and the number of Lyme disease cases at the county level, where a higher proportion of rodent species was associated with higher levels of species richness, potentially amplifying the disease risk. Our results highlight that analyse at a single spatial scale can miss some impacts of biodiversity on human health. Thus, multi-scale analyses with consideration of host phylogenetic diversity are critical for improving our understanding of diversity-disease relationships.
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Affiliation(s)
- Yingying X G Wang
- Wildlife Ecology and Conservation Group, Wageningen University & Research, 6708 PB Wageningen, Netherlands; Department of Biological and Environmental Science, University of Jyväskylä, FI-40014 Jyväskylä, Finland
| | - Kevin D Matson
- Wildlife Ecology and Conservation Group, Wageningen University & Research, 6708 PB Wageningen, Netherlands
| | - Herbert H T Prins
- Department of Animal Sciences, Wageningen University & Research, 6708 WD Wageningen, Netherlands
| | - Yanjie Xu
- Wildlife Ecology and Conservation Group, Wageningen University & Research, 6708 PB Wageningen, Netherlands; Finnish Museum of Natural History, University of Helsinki, 17, 00014, Finland
| | - Zheng Y X Huang
- College of Life Sciences, Nanjing Normal University, 210046 Nanjing, China.
| | - Willem F de Boer
- Wildlife Ecology and Conservation Group, Wageningen University & Research, 6708 PB Wageningen, Netherlands
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13
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Chen S, Liu X, He Q, Zhou S. Higher-order interactions on disease transmission can reverse the dilution effect or weaken the amplification effect to unimodal pattern. Ecol Modell 2022. [DOI: 10.1016/j.ecolmodel.2022.110156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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14
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Sokolow SH, Nova N, Jones IJ, Wood CL, Lafferty KD, Garchitorena A, Hopkins SR, Lund AJ, MacDonald AJ, LeBoa C, Peel AJ, Mordecai EA, Howard ME, Buck JC, Lopez-Carr D, Barry M, Bonds MH, De Leo GA. Ecological and socioeconomic factors associated with the human burden of environmentally mediated pathogens: a global analysis. Lancet Planet Health 2022; 6:e870-e879. [PMID: 36370725 PMCID: PMC9669458 DOI: 10.1016/s2542-5196(22)00248-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 08/22/2022] [Accepted: 10/04/2022] [Indexed: 06/16/2023]
Abstract
BACKGROUND Billions of people living in poverty are at risk of environmentally mediated infectious diseases-that is, pathogens with environmental reservoirs that affect disease persistence and control and where environmental control of pathogens can reduce human risk. The complex ecology of these diseases creates a global health problem not easily solved with medical treatment alone. METHODS We quantified the current global disease burden caused by environmentally mediated infectious diseases and used a structural equation model to explore environmental and socioeconomic factors associated with the human burden of environmentally mediated pathogens across all countries. FINDINGS We found that around 80% (455 of 560) of WHO-tracked pathogen species known to infect humans are environmentally mediated, causing about 40% (129 488 of 359 341 disability-adjusted life years) of contemporary infectious disease burden (global loss of 130 million years of healthy life annually). The majority of this environmentally mediated disease burden occurs in tropical countries, and the poorest countries carry the highest burdens across all latitudes. We found weak associations between disease burden and biodiversity or agricultural land use at the global scale. In contrast, the proportion of people with rural poor livelihoods in a country was a strong proximate indicator of environmentally mediated infectious disease burden. Political stability and wealth were associated with improved sanitation, better health care, and lower proportions of rural poverty, indirectly resulting in lower burdens of environmentally mediated infections. Rarely, environmentally mediated pathogens can evolve into global pandemics (eg, HIV, COVID-19) affecting even the wealthiest communities. INTERPRETATION The high and uneven burden of environmentally mediated infections highlights the need for innovative social and ecological interventions to complement biomedical advances in the pursuit of global health and sustainability goals. FUNDING Bill & Melinda Gates Foundation, National Institutes of Health, National Science Foundation, Alfred P. Sloan Foundation, National Institute for Mathematical and Biological Synthesis, Stanford University, and the US Defense Advanced Research Projects Agency.
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Affiliation(s)
- Susanne H Sokolow
- Woods Institute for the Environment, Stanford University, Stanford, CA, USA; Marine Science Institute, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Nicole Nova
- Department of Biology, Stanford University, Stanford, CA, USA; High Meadows Environmental Institute, Princeton University, Princeton, NJ, USA.
| | - Isabel J Jones
- Hopkins Marine Station, Stanford University, Pacific Grove, CA, USA
| | - Chelsea L Wood
- School of Aquatic and Fishery Sciences, University of Washington, Seattle, WA, USA
| | - Kevin D Lafferty
- US Geological Survey, Western Ecological Research Center, c/o Marine Science Institute, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Andres Garchitorena
- MIVEGEC, Université Montpellier, Centre National de la Recherche Scientifique, Institut de Recherche pour le Développement, Montpellier, France; PIVOT, Division of Global Health Equity, Brigham and Women's Hospital, Boston, MA, USA
| | | | - Andrea J Lund
- Emmett Interdisciplinary Program in Environment and Resources (E-IPER), Stanford University, Stanford, CA, USA
| | - Andrew J MacDonald
- Department of Biology, Stanford University, Stanford, CA, USA; Earth Research Institute, University of California Santa Barbara, Santa Barbara, CA, USA
| | | | - Alison J Peel
- Centre for Planetary Health and Food Security, Griffith University, Nathan, QLD, Australia
| | - Erin A Mordecai
- Department of Biology, Stanford University, Stanford, CA, USA
| | - Meghan E Howard
- Department of Biology, Stanford University, Stanford, CA, USA
| | - Julia C Buck
- Department of Biology and Marine Biology, University of North Carolina Wilmington, Wilmington, NC, USA
| | - David Lopez-Carr
- Department of Geography, University of California Santa Barbara, Santa Barbara, CA, USA
| | - Michele Barry
- Woods Institute for the Environment, Stanford University, Stanford, CA, USA; Center for Innovation in Global Health, Stanford University, Stanford, CA, USA
| | - Matthew H Bonds
- PIVOT, Division of Global Health Equity, Brigham and Women's Hospital, Boston, MA, USA; Department of Global Health and Social Medicine, Harvard Medical School, Boston, MA
| | - Giulio A De Leo
- Woods Institute for the Environment, Stanford University, Stanford, CA, USA; Department of Biology, Stanford University, Stanford, CA, USA; Hopkins Marine Station, Stanford University, Pacific Grove, CA, USA
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15
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Mader AD, Waters NA, Kawazu EC, Marvier M, Monnin N, Salkeld DJ. Messaging Should Reflect the Nuanced Relationship between Land Change and Zoonotic Disease Risk. Bioscience 2022; 72:1099-1104. [PMID: 36325104 PMCID: PMC9618275 DOI: 10.1093/biosci/biac075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
A hallmark of the media publicity surrounding COVID-19 has been the message that land change causes zoonotic diseases to spill over from wild animals to humans. The secondary peer-reviewed literature sends a similar message. However, as indicated in the primary peer-reviewed literature, the complexity of interacting variables involved in zoonotic disease spillover makes it unlikely for such a claim to be universally applicable. The secondary peer-reviewed literature and the mainstream media also differ markedly from the primary peer-reviewed literature in their lack of nuance in messaging about the relationship between land change and spillover risk. We advocate accurate, nuanced messaging for the sake of the local communities at greatest risk from zoonotic disease, for the sake of scientific credibility, and so that proportionate attention may be given to other possible drivers of spillover risk.
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Affiliation(s)
- André D Mader
- Institute for Global Environmental Strategies , Hayama, Kanagawa, Japan
| | - Neil A Waters
- University of Tokyo , Kashiwa, Chiba Prefecture, Japan
| | - Erin C Kawazu
- Global Environmental Strategies , Hayama, Kanagawa, Japan
| | | | - Noémie Monnin
- University College London , London, England, United Kingdom
| | - Daniel J Salkeld
- Colorado State University , Fort Collins, Colorado, United States
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16
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Chen L, Chen S, Kong P, Zhou L. Host competence, interspecific competition and vector preference interact to determine the vector-borne infection ecology. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.993844] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Understanding how ecological interactions affect vector-borne disease dynamics is crucial in the context of rapid biodiversity loss and increased emerging vector-borne diseases. Although there have been many studies on the impact of interspecific competition and host competence on disease dynamics, few of them have addressed the case of a vector-borne disease. Using a simple compartment model with two competing host species and one vector, we investigated the combined effects of vector preference, host competence, and interspecific competition on disease risk in a vector-borne system. Our research demonstrated that disease transmission dynamics in multi-host communities are more complex than anticipated. Vector preference and differences in host competence shifted the direction of the effect of competition on community disease risk, yet interspecific competition quantitatively but not qualitatively changed the effect of vector preference on disease risk. Our work also identified the conditions of the dilution effect and amplification effect in frequency-dependent transmission mode, and we discovered that adding vector preference and interspecific competition into a simple two-host-one-vector model altered the outcomes of how increasing species richness affects disease risk. Our work explains some of the variation in outcomes in previous empirical and theoretical studies on the dilution effect.
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17
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Infante J, Riquelme M, Huerta N, Oettinger S, Fredes F, Simonetti JA, Rubio AV. Cryptosporidium spp. and Giardia spp. in wild rodents: using occupancy models to estimate drivers of occurrence and prevalence in native forest and exotic Pinus radiata plantations from Central Chile. Acta Trop 2022; 235:106635. [DOI: 10.1016/j.actatropica.2022.106635] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Revised: 08/02/2022] [Accepted: 08/04/2022] [Indexed: 11/26/2022]
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18
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Ma Z(S, Zhang YP. Ecology of Human Medical Enterprises: From Disease Ecology of Zoonoses, Cancer Ecology Through to Medical Ecology of Human Microbiomes. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.879130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
In nature, the interaction between pathogens and their hosts is only one of a handful of interaction relationships between species, including parasitism, predation, competition, symbiosis, commensalism, and among others. From a non-anthropocentric view, parasitism has relatively fewer essential differences from the other relationships; but from an anthropocentric view, parasitism and predation against humans and their well-beings and belongings are frequently related to heinous diseases. Specifically, treating (managing) diseases of humans, crops and forests, pets, livestock, and wildlife constitute the so-termed medical enterprises (sciences and technologies) humans endeavor in biomedicine and clinical medicine, veterinary, plant protection, and wildlife conservation. In recent years, the significance of ecological science to medicines has received rising attentions, and the emergence and pandemic of COVID-19 appear accelerating the trend. The facts that diseases are simply one of the fundamental ecological relationships in nature, and the study of the relationships between species and their environment is a core mission of ecology highlight the critical importance of ecological science. Nevertheless, current studies on the ecology of medical enterprises are highly fragmented. Here, we (i) conceptually overview the fields of disease ecology of wildlife, cancer ecology and evolution, medical ecology of human microbiome-associated diseases and infectious diseases, and integrated pest management of crops and forests, across major medical enterprises. (ii) Explore the necessity and feasibility for a unified medical ecology that spans biomedicine, clinical medicine, veterinary, crop (forest and wildlife) protection, and biodiversity conservation. (iii) Suggest that a unified medical ecology of human diseases is both necessary and feasible, but laissez-faire terminologies in other human medical enterprises may be preferred. (iv) Suggest that the evo-eco paradigm for cancer research can play a similar role of evo-devo in evolutionary developmental biology. (v) Summarized 40 key ecological principles/theories in current disease-, cancer-, and medical-ecology literatures. (vi) Identified key cross-disciplinary discovery fields for medical/disease ecology in coming decade including bioinformatics and computational ecology, single cell ecology, theoretical ecology, complexity science, and the integrated studies of ecology and evolution. Finally, deep understanding of medical ecology is of obvious importance for the safety of human beings and perhaps for all living things on the planet.
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19
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Takimoto G, Shirakawa H, Sato T. The relationship between vector species richness and the risk of vector-borne infectious diseases. Am Nat 2022; 200:330-344. [DOI: 10.1086/720403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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20
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Occhibove F, Kenobi K, Swain M, Risley C. An eco-epidemiological modeling approach to investigate dilution effect in two different tick-borne pathosystems. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2022; 32:e2550. [PMID: 35092122 PMCID: PMC9286340 DOI: 10.1002/eap.2550] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Revised: 10/20/2021] [Accepted: 10/27/2021] [Indexed: 05/05/2023]
Abstract
Disease (re)emergence appears to be driven by biodiversity decline and environmental change. As a result, it is increasingly important to study host-pathogen interactions within the context of their ecology and evolution. The dilution effect is the concept that higher biodiversity decreases pathogen transmission. It has been observed especially in zoonotic vector-borne pathosystems, yet evidence against it has been found. In particular, it is still debated how the community (dis)assembly assumptions and the degree of generalism of vectors and pathogens affect the direction of the biodiversity-pathogen transmission relationship. The aim of this study was to use empirical data and mechanistic models to investigate dilution mechanisms in two rodent-tick-pathogen systems differing in their vector degree of generalism. A community was assembled to include ecological interactions that expand from purely additive to purely substitutive. Such systems are excellent candidates to analyze the link between vector ecology, community (dis)assembly dynamics, and pathogen transmission. To base our mechanistic models on empirical data, rodent live-trapping, including tick sampling, was conducted in Wales across two seasons for three consecutive years. We have developed a deterministic single-vector, multi-host compartmental model that includes ecological relationships with non-host species, uniquely integrating theoretical and observational approaches. To describe pathogen transmission across a gradient of community diversity, the model was populated with parameters describing five different scenarios differing in ecological complexity; each based around one of the pathosystems: Ixodes ricinus (generalist tick)-Borrelia burgdorferi and I. trianguliceps (small mammals specialist tick)-Babesia microti. The results suggested that community composition and interspecific dynamics affected pathogen transmission with different dilution outcomes depending on the vector degree of generalism. The model provides evidence that dilution and amplification effects are not mutually exclusive in the same community but depend on vector ecology and the epidemiological output considered (i.e., the "risk" of interest). In our scenarios, more functionally diverse communities resulted in fewer infectious rodents, supporting the dilution effect. In the pathosystem with generalist vector we identified a hump shaped relationship between diversity and infections in hosts, while for that characterized by specialist tick, this relationship was more complex and more dependent upon specific parameter values.
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Affiliation(s)
- Flavia Occhibove
- IBERS, Aberystwyth UniversityAberystwythUK
- UK Centre for Ecology & HydrologyWallingfordUK
| | - Kim Kenobi
- Department of MathematicsAberystwyth UniversityAberystwythUK
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21
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Gagne RB, Crooks KR, Craft ME, Chiu ES, Fountain-Jones NM, Malmberg JL, Carver S, Funk WC, VandeWoude S. Parasites as conservation tools. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2022; 36:e13719. [PMID: 33586245 DOI: 10.1111/cobi.13719] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Accepted: 02/08/2021] [Indexed: 06/12/2023]
Abstract
Parasite success typically depends on a close relationship with one or more hosts; therefore, attributes of parasitic infection have the potential to provide indirect details of host natural history and are biologically relevant to animal conservation. Characterization of parasite infections has been useful in delineating host populations and has served as a proxy for assessment of environmental quality. In other cases, the utility of parasites is just being explored, for example, as indicators of host connectivity. Innovative studies of parasite biology can provide information to manage major conservation threats by using parasite assemblage, prevalence, or genetic data to provide insights into the host. Overexploitation, habitat loss and fragmentation, invasive species, and climate change are major threats to animal conservation, and all of these can be informed by parasites.
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Affiliation(s)
- Roderick B Gagne
- Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, USA
| | - Kevin R Crooks
- Department of Fish, Wildlife, and Conservation Biology, Colorado State University, Fort Collins, Colorado, USA
| | - Meggan E Craft
- Department of Veterinary Population Medicine, University of Minnesota, St Paul, Minnesota, USA
| | - Elliott S Chiu
- Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, USA
| | | | - Jennifer L Malmberg
- Department of Veterinary Sciences, Wyoming State Veterinary Laboratory, University of Wyoming, Laramie, Wyoming, USA
| | - Scott Carver
- School of Natural Sciences, University of Tasmania, Hobart, Tasmania, Australia
| | - W Chris Funk
- Graduate Degree Program in Ecology, Department of Biology, Colorado State University, Fort Collins, Colorado, USA
| | - Sue VandeWoude
- Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, USA
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22
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Jones IJ, Sokolow SH, De Leo GA. Three reasons why expanded use of natural enemy solutions may offer sustainable control of human infections. PEOPLE AND NATURE 2022; 4:32-43. [PMID: 35450207 PMCID: PMC9017516 DOI: 10.1002/pan3.10264] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
1. Many infectious pathogens spend a significant portion of their life cycles in the environment or in animal hosts, where ecological interactions with natural enemies may influence pathogen transmission to people. Yet, our understanding of natural enemy opportunities for human disease control is lacking, despite widespread uptake and success of natural enemy solutions for pest and parasite management in agriculture. 2. Here we explore three reasons why conserving, restoring, or augmenting specific natural enemies in the environment could offer a promising complement to conventional clinical strategies to fight environmentally mediated pathogens and parasites. (1) Natural enemies of human infections abound in nature, largely understudied and undiscovered. (2) Natural enemy solutions could provide ecological options for infectious disease control where conventional interventions are lacking. And, (3) Many natural enemy solutions could provide important co-benefits for conservation and human well-being. 3. We illustrate these three arguments with a broad set of examples whereby natural enemies of human infections have been used or proposed to curb human disease burden, with some clear successes. However, the evidence base for most proposed solutions is sparse, and many opportunities likely remain undiscovered, highlighting opportunities for future research.
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Affiliation(s)
- IJ Jones
- Hopkins Marine Station of Stanford University, Pacific Grove, CA, 93950,Corresponding Author: Isabel J. Jones, , 415-309-3125
| | - SH Sokolow
- Woods Institute for the Environment, Stanford University, Stanford, CA, 94305,Marine Science Institute, University of California, Santa Barbara, Santa Barbara, CA 93106
| | - GA De Leo
- Hopkins Marine Station of Stanford University, Pacific Grove, CA, 93950,Woods Institute for the Environment, Stanford University, Stanford, CA, 94305
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23
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Kocher A, Cornuault J, Gantier JC, Manzi S, Chavy A, Girod R, Dusfour I, Forget PM, Ginouves M, Prévot G, Guégan JF, Bañuls AL, de Thoisy B, Murienne J. Biodiversity and vector-borne diseases: host dilution and vector amplification occur simultaneously for Amazonian leishmaniases. Mol Ecol 2022; 32:1817-1831. [PMID: 35000240 DOI: 10.1111/mec.16341] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2021] [Revised: 12/02/2021] [Accepted: 12/23/2021] [Indexed: 11/29/2022]
Abstract
Changes in biodiversity may impact infectious disease transmission through multiple mechanisms. We explored the impact of biodiversity changes on the transmission of Amazonian leishmaniases, a group of wild zoonoses transmitted by phlebotomine sand flies (Psychodidae), which represent an important health burden in a region where biodiversity is both rich and threatened. Using molecular analyses of sand fly pools and blood-fed dipterans, we characterized the disease system in forest sites in French Guiana undergoing different levels of human-induced disturbance. We show that the prevalence of Leishmania parasites in sand flies correlates positively with the relative abundance of mammal species known as Leishmania reservoirs. In addition, Leishmania reservoirs tend to dominate in less diverse mammal communities, in accordance with the dilution effect hypothesis. This results in a negative relationship between Leishmania prevalence and mammal diversity. On the other hand, higher mammal diversity is associated with higher sand fly density, possibly because more diverse mammal communities harbor higher biomass and more abundant feeding resources for sand flies, although more research is needed to identify the factors that shape sand fly communities. As a consequence of these antagonistic effects, decreased mammal diversity comes with an increase of parasite prevalence in sand flies, but has no detectable impact on the density of infected sand flies. These results represent additional evidence that biodiversity changes may simultaneously dilute and amplify vector-borne disease transmission through different mechanisms that need to be better understood before drawing generalities on the biodiversity-disease relationship.
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Affiliation(s)
- Arthur Kocher
- Laboratoire Évolution et Diversité Biologique (UMR5174 EDB) - CNRS, IRD, Université Toulouse III Paul Sabatier - Toulouse, France.,MIVEGEC, Université de Montpellier, IRD, CNRS, Montpellier, France.,Institut Pasteur de la Guyane, Cayenne, France.,Transmission, Infection, Diversification & Evolution Group, Max-Planck Institute for the Science of Human History, Kahlaische Str. 10, 07745, Jena, Germany
| | - Josselin Cornuault
- Real Jardín Botánico CSIC, Plaza Murillo 2, 28014, Madrid, Spain.,ISEM, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France
| | - Jean-Charles Gantier
- Laboratoire des Identifications Fongiques et Entomo-parasitologiques, Mennecy, France
| | - Sophie Manzi
- Laboratoire Évolution et Diversité Biologique (UMR5174 EDB) - CNRS, IRD, Université Toulouse III Paul Sabatier - Toulouse, France
| | - Agathe Chavy
- Institut Pasteur de la Guyane, Cayenne, France.,TBIP, Université de Guyane, 97300, Cayenne, France
| | | | | | - Pierre-Michel Forget
- Muséum National d'Histoire Naturelle, UMR-7179 MECADEV (Mécanismes Adaptatifs et Evolution), MNHN-CNRS, Brunoy, France
| | - Marine Ginouves
- TBIP, Université de Guyane, 97300, Cayenne, France.,Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR9017-CIIL Centre d'Infection et d'Immunité de Lille, 59000, Lille, France
| | - Ghislaine Prévot
- TBIP, Université de Guyane, 97300, Cayenne, France.,Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR9017-CIIL Centre d'Infection et d'Immunité de Lille, 59000, Lille, France
| | - Jean-François Guégan
- MIVEGEC, Université de Montpellier, IRD, CNRS, Montpellier, France.,INRAE, Cirad, Université de Montpellier, UMR ASTRE, Montpellier, France
| | | | - Benoit de Thoisy
- Institut Pasteur de la Guyane, Cayenne, France.,Association Kwata, Cayenne, French Guiana
| | - Jérôme Murienne
- Laboratoire Évolution et Diversité Biologique (UMR5174 EDB) - CNRS, IRD, Université Toulouse III Paul Sabatier - Toulouse, France
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24
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Loss SR, Noden BH, Fuhlendorf SD. Woody plant encroachment and the ecology of vector‐borne diseases. J Appl Ecol 2021. [DOI: 10.1111/1365-2664.14083] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Scott R. Loss
- Department of Natural Resource Ecology and Management Oklahoma State University Stillwater OK USA
| | - Bruce H. Noden
- Department of Entomology and Plant Pathology Oklahoma State University Stillwater OK USA
| | - Samuel D. Fuhlendorf
- Department of Natural Resource Ecology and Management Oklahoma State University Stillwater OK USA
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25
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Daipan BP. Patterns of forest cover loss in the terrestrial Key Biodiversity Areas in the Philippines: critical habitat conservation priorities. JOURNAL OF THREATENED TAXA 2021. [DOI: 10.11609/jott.6904.13.13.20019-20032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Abstract
The Philippines, home to over 20,000 endemic species of plants and animals, is facing a biodiversity crisis due to the constant decrease of forest cover. The Key Biodiversity Area (KBA) approach was developed to conserve species threatened with extinction using a site-based conservation strategy to select globally important sites using threshold-based criteria for species irreplaceability and vulnerability. This study investigates the applicability of remotely sensed data through geospatial analysis to quantify forest cover loss of the 101 terrestrial KBAs in the country between 2001 and 2019. Results showed that the study sites had 4.5 million hectares (ha) of forest in the year 2000. However, these sites have lost about 270,000 ha of forest in nearly two decades, marking a steady decline with an annual deforestation rate of 14,213 ha per year in these terrestrial KBAs. The majority of the study sites (58) had a high percentage of forest loss (>3.13%), and these should be prioritized for conservation. By the year 2030, it is forecast that a total of 331 thousand ha of forest will be lost unless there is a transformational change in the country’s approach to dealing with deforestation. The results of this study provide relevant data and information in forest habitat in near real-time monitoring to assess the impact and effectiveness of forest governance and approaches within these critical habitats.
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26
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Glidden CK, Nova N, Kain MP, Lagerstrom KM, Skinner EB, Mandle L, Sokolow SH, Plowright RK, Dirzo R, De Leo GA, Mordecai EA. Human-mediated impacts on biodiversity and the consequences for zoonotic disease spillover. Curr Biol 2021; 31:R1342-R1361. [PMID: 34637744 DOI: 10.1016/j.cub.2021.08.070] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Human-mediated changes to natural ecosystems have consequences for both ecosystem and human health. Historically, efforts to preserve or restore 'biodiversity' can seem to be in opposition to human interests. However, the integration of biodiversity conservation and public health has gained significant traction in recent years, and new efforts to identify solutions that benefit both environmental and human health are ongoing. At the forefront of these efforts is an attempt to clarify ways in which biodiversity conservation can help reduce the risk of zoonotic spillover of pathogens from wild animals, sparking epidemics and pandemics in humans and livestock. However, our understanding of the mechanisms by which biodiversity change influences the spillover process is incomplete, limiting the application of integrated strategies aimed at achieving positive outcomes for both conservation and disease management. Here, we review the literature, considering a broad scope of biodiversity dimensions, to identify cases where zoonotic pathogen spillover is mechanistically linked to changes in biodiversity. By reframing the discussion around biodiversity and disease using mechanistic evidence - while encompassing multiple aspects of biodiversity including functional diversity, landscape diversity, phenological diversity, and interaction diversity - we work toward general principles that can guide future research and more effectively integrate the related goals of biodiversity conservation and spillover prevention. We conclude by summarizing how these principles could be used to integrate the goal of spillover prevention into ongoing biodiversity conservation initiatives.
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Affiliation(s)
| | - Nicole Nova
- Department of Biology, Stanford University, Stanford, CA 94305, USA.
| | - Morgan P Kain
- Department of Biology, Stanford University, Stanford, CA 94305, USA; Natural Capital Project, Stanford University, Stanford, CA 94305, USA
| | | | - Eloise B Skinner
- Department of Biology, Stanford University, Stanford, CA 94305, USA; Centre for Planetary Health and Food Security, Griffith University, Gold Coast, QLD 4222, Australia
| | - Lisa Mandle
- Department of Biology, Stanford University, Stanford, CA 94305, USA; Natural Capital Project, Stanford University, Stanford, CA 94305, USA; Woods Institute for the Environment, Stanford University, Stanford, CA 94305, USA
| | - Susanne H Sokolow
- Woods Institute for the Environment, Stanford University, Stanford, CA 94305, USA; Marine Science Institute, University of California Santa Barbara, Santa Barbara, CA 93106, USA
| | - Raina K Plowright
- Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT 59717, USA
| | - Rodolfo Dirzo
- Department of Biology, Stanford University, Stanford, CA 94305, USA; Woods Institute for the Environment, Stanford University, Stanford, CA 94305, USA
| | - Giulio A De Leo
- Department of Biology, Stanford University, Stanford, CA 94305, USA; Woods Institute for the Environment, Stanford University, Stanford, CA 94305, USA; Hopkins Marine Station, Stanford University, Pacific Grove, CA 93950, USA
| | - Erin A Mordecai
- Department of Biology, Stanford University, Stanford, CA 94305, USA
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Wang YXG, Matson KD, Santini L, Visconti P, Hilbers JP, Huijbregts MAJ, Xu Y, Prins HHT, Allen T, Huang ZYX, de Boer WF. Mammal assemblage composition predicts global patterns in emerging infectious disease risk. GLOBAL CHANGE BIOLOGY 2021; 27:4995-5007. [PMID: 34214237 PMCID: PMC8518613 DOI: 10.1111/gcb.15784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Revised: 06/13/2021] [Accepted: 06/13/2021] [Indexed: 06/13/2023]
Abstract
As a source of emerging infectious diseases, wildlife assemblages (and related spatial patterns) must be quantitatively assessed to help identify high-risk locations. Previous assessments have largely focussed on the distributions of individual species; however, transmission dynamics are expected to depend on assemblage composition. Moreover, disease-diversity relationships have mainly been studied in the context of species loss, but assemblage composition and disease risk (e.g. infection prevalence in wildlife assemblages) can change without extinction. Based on the predicted distributions and abundances of 4466 mammal species, we estimated global patterns of disease risk through the calculation of the community-level basic reproductive ratio R0, an index of invasion potential, persistence, and maximum prevalence of a pathogen in a wildlife assemblage. For density-dependent diseases, we found that, in addition to tropical areas which are commonly viewed as infectious disease hotspots, northern temperate latitudes included high-risk areas. We also forecasted the effects of climate change and habitat loss from 2015 to 2035. Over this period, many local assemblages showed no net loss of species richness, but the assemblage composition (i.e. the mix of species and their abundances) changed considerably. Simultaneously, most areas experienced a decreased risk of density-dependent diseases but an increased risk of frequency-dependent diseases. We further explored the factors driving these changes in disease risk. Our results suggest that biodiversity and changes therein jointly influence disease risk. Understanding these changes and their drivers and ultimately identifying emerging infectious disease hotspots can help health officials prioritize resource distribution.
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Affiliation(s)
- Yingying X. G. Wang
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- Department of Biological and Environmental ScienceUniversity of JyväskyläJyväskyläFinland
| | - Kevin D. Matson
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
| | - Luca Santini
- Department of Biology and Biotechnologies “Charles Darwin”Sapienza University of RomeRomeItaly
- Institute of Research on Terrestrial Ecosystems (CNR‐IRET)National Research CouncilMonterotondo (Rome)Italy
- Department of Environmental ScienceRadboud UniversityNijmegenThe Netherlands
| | - Piero Visconti
- International Institute for Applied System AnalysisLaxenburgAustria
- Institute of ZoologyZoological Society of LondonLondonUK
| | - Jelle P. Hilbers
- Department of Environmental ScienceRadboud UniversityNijmegenThe Netherlands
| | | | - Yanjie Xu
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- The Finnish Museum of Natural HistoryUniversity of HelsinkiHelsinkiFinland
| | - Herbert H. T. Prins
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- Department of Animal SciencesWageningen University and ResearchWageningenThe Netherlands
| | | | - Zheng Y. X. Huang
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- College of Life SciencesNanjing Normal UniversityNanjingChina
| | - Willem F. de Boer
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
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28
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Sitko J, Heneberg P. Long-term dynamics of trematode infections in common birds that use farmlands as their feeding habitats. Parasit Vectors 2021; 14:383. [PMID: 34353362 PMCID: PMC8344216 DOI: 10.1186/s13071-021-04876-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2020] [Accepted: 07/09/2021] [Indexed: 11/10/2022] Open
Abstract
Background The biodiversity of farmland habitats is witnessing unprecedented change, mostly in declines and simplification of assemblages that were established during centuries of the use of traditional agricultural techniques. In Central Europe, conspicuous changes are evident in populations of common farmland birds, in strong contrast to forest birds in the same region. However, there is a lack of information on longitudinal changes in trematodes that are associated with common farmland birds, despite the fact that diversity of trematodes is directly linked to the preservation of long-established food webs and habitat use adaptations of their hosts. Methods We analyzed the population trends of trematodes for the period 1963–2020 in six bird species that use Central European farmlands as their predominant feeding habitats. Namely, we examined Falco tinnunculus, Vanellus vanellus, winter populations of Buteo buteo, Ciconia ciconia, extravilan population of Pica pica, and Asio otus, all originating from the Czech Republic. Results We observed dramatic population losses of all trematode species in C. ciconia and V. vanellus; the changes were less prominent in the other examined hosts. Importantly, the declines in prevalence and intensity of infection affected all previously dominant species. These included Tylodelphys excavata and Chaunocephalus ferox in C. ciconia, Lyperosomum petiolatum in P. pica, Strigea strigis in A. otus, Neodiplostomum attenuatum and Strigea falconis in B. buteo (χ2 test P < 0.001 each), and Echinoparyphium agnatum and Uvitellina adelpha in V. vanellus (completely absent in 2011–2000). In contrast, the frequency and spectrum of isolated records of trematode species did not change to any large extent except those in V. vanellus. Conclusions The analysis of six unrelated common bird species that use farmlands as their feeding habitats revealed a previously unreported collapse of previously dominant trematode species. The previously dominant trematode species declined in terms of both prevalence and intensity of infection. The causes of the observed declines are unclear; of note is, however, that some of the broadly used agrochemicals, such as azole fungicides, are well known for their antihelminthic activity. Further research is needed to provide direct evidence for effects of field-realistic concentrations of azole fungicides on the survival and fitness of trematodes. Graphical abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1186/s13071-021-04876-2.
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Affiliation(s)
- Jiljí Sitko
- Comenius Museum, Moravian Ornithological Station, Přerov, Czech Republic
| | - Petr Heneberg
- Charles University, Third Faculty of Medicine, Prague, Czech Republic.
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Ogden NH, Beard CB, Ginsberg HS, Tsao JI. Possible Effects of Climate Change on Ixodid Ticks and the Pathogens They Transmit: Predictions and Observations. JOURNAL OF MEDICAL ENTOMOLOGY 2021; 58:1536-1545. [PMID: 33112403 PMCID: PMC9620468 DOI: 10.1093/jme/tjaa220] [Citation(s) in RCA: 62] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2020] [Indexed: 05/09/2023]
Abstract
The global climate has been changing over the last century due to greenhouse gas emissions and will continue to change over this century, accelerating without effective global efforts to reduce emissions. Ticks and tick-borne diseases (TTBDs) are inherently climate-sensitive due to the sensitivity of tick lifecycles to climate. Key direct climate and weather sensitivities include survival of individual ticks, and the duration of development and host-seeking activity of ticks. These sensitivities mean that in some regions a warming climate may increase tick survival, shorten life-cycles and lengthen the duration of tick activity seasons. Indirect effects of climate change on host communities may, with changes in tick abundance, facilitate enhanced transmission of tick-borne pathogens. High temperatures, and extreme weather events (heat, cold, and flooding) are anticipated with climate change, and these may reduce tick survival and pathogen transmission in some locations. Studies of the possible effects of climate change on TTBDs to date generally project poleward range expansion of geographical ranges (with possible contraction of ranges away from the increasingly hot tropics), upslope elevational range spread in mountainous regions, and increased abundance of ticks in many current endemic regions. However, relatively few studies, using long-term (multi-decade) observations, provide evidence of recent range changes of tick populations that could be attributed to recent climate change. Further integrated 'One Health' observational and modeling studies are needed to detect changes in TTBD occurrence, attribute them to climate change, and to develop predictive models of public- and animal-health needs to plan for TTBD emergence.
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Affiliation(s)
- Nicholas H. Ogden
- Public Health Risk Sciences Division, National Microbiology Laboratory, Public Health Agency of Canada, St-Hyacinthe, QC, Canada J2S 2M2
- Groupe de recherche en épidémiologie des zoonoses et santé publique (GREZOSP), Faculté de médecine vétérinaire, Université de Montréal, St-Hyacinthe, QC, Canada J2S 2M2
- Corresponding author,
| | - C. Ben Beard
- Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, 3156 Rampart Road, Fort Collins, CO 80521
| | - Howard S. Ginsberg
- U.S. Geological Survey, Patuxent Wildlife Research Center, Rhode Island Field Station, University of Rhode Island, Kingston, RI 02881
| | - Jean I. Tsao
- Department of Fisheries and Wildlife, Michigan State University, East Lansing, MI 48824
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30
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Codeço CT, Dal'Asta AP, Rorato AC, Lana RM, Neves TC, Andreazzi CS, Barbosa M, Escada MIS, Fernandes DA, Rodrigues DL, Reis IC, Silva-Nunes M, Gontijo AB, Coelho FC, Monteiro AMV. Epidemiology, Biodiversity, and Technological Trajectories in the Brazilian Amazon: From Malaria to COVID-19. Front Public Health 2021; 9:647754. [PMID: 34327184 PMCID: PMC8314010 DOI: 10.3389/fpubh.2021.647754] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Accepted: 06/14/2021] [Indexed: 11/13/2022] Open
Abstract
The Amazon biome is under severe threat due to increasing deforestation rates and loss of biodiversity and ecosystem services while sustaining a high burden of neglected tropical diseases. Approximately two thirds of this biome are located within Brazilian territory. There, socio-economic and environmental landscape transformations are linked to the regional agrarian economy dynamics, which has developed into six techno-productive trajectories (TTs). These TTs are the product of the historical interaction between Peasant and Farmer and Rancher practices, technologies and rationalities. This article investigates the distribution of the dominant Brazilian Amazon TTs and their association with environmental degradation and vulnerability to neglected tropical diseases. The goal is to provide a framework for the joint debate of the local economic, environmental and health dimensions. We calculated the dominant TT for each municipality in 2017. Peasant trajectories (TT1, TT2, and TT3) are dominant in ca. fifty percent of the Amazon territory, mostly concentrated in areas covered by continuous forest where malaria is an important morbidity and mortality cause. Cattle raising trajectories are associated with higher deforestation rates. Meanwhile, Farmer and Rancher economies are becoming dominant trajectories, comprising large scale cattle and grain production. These trajectories are associated with rapid biodiversity loss and a high prevalence of neglected tropical diseases, such as leishmaniasis, Aedes-borne diseases and Chagas disease. Overall, these results defy simplistic views that the dominant development trajectory for the Amazon will optimize economic, health and environmental indicators. This approach lays the groundwork for a more integrated narrative consistent with the economic history of the Brazilian Amazon.
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Affiliation(s)
- Claudia T. Codeço
- Programa de Computação Científica, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil
| | - Ana P. Dal'Asta
- Laboratório de Investigação em Sistemas Socioambientais, Instituto Nacional de Pesquisas Espaciais, Sao Jose dos Campos, Brazil
| | - Ana C. Rorato
- Laboratório de Investigação em Sistemas Socioambientais, Instituto Nacional de Pesquisas Espaciais, Sao Jose dos Campos, Brazil
- Centro de Ciência do Sistema Terrestre, Instituto Nacional de Pesquisas Espaciais, Sao Jose dos Campos, Brazil
| | - Raquel M. Lana
- Programa de Computação Científica, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil
| | - Tatiana C. Neves
- Programa de Computação Científica, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil
| | - Cecilia S. Andreazzi
- Laboratório de Biologia e Parasitologia de Mamíferos Silvestres Reservatórios, Instituto Oswaldo Cruz, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil
| | - Milton Barbosa
- Ecologia Evolutiva e Biodiversidade, DGEE, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Maria I. S. Escada
- Laboratório de Investigação em Sistemas Socioambientais, Instituto Nacional de Pesquisas Espaciais, Sao Jose dos Campos, Brazil
| | - Danilo A. Fernandes
- Instituto de Ciências Sociais Aplicadas e Núcleo de Altos Estudos Amazônicos, Universidade Federal do Pará, Belem, Brazil
| | - Danuzia L. Rodrigues
- Instituto de Estudos em Desenvolvimento Agrário e Regional, Universidade Federal do Sul e Sudeste do Pará, Maraba, Brazil
| | - Izabel C. Reis
- Laboratório de Mosquitos Transmissores de Hematozoários, Instituto Oswaldo Cruz, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil
| | | | - Alexandre B. Gontijo
- Laboratório de Produtos Florestais, Serviço Florestal Brasileiro, Brasília, Brazil
| | - Flavio C. Coelho
- Escola de Matemática Aplicada, Fundação Getúlio Vargas, Rio de Janeiro, Brazil
| | - Antonio M. V. Monteiro
- Laboratório de Investigação em Sistemas Socioambientais, Instituto Nacional de Pesquisas Espaciais, Sao Jose dos Campos, Brazil
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Invasive Burmese pythons alter host use and virus infection in the vector of a zoonotic virus. Commun Biol 2021; 4:804. [PMID: 34183751 PMCID: PMC8239020 DOI: 10.1038/s42003-021-02347-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2020] [Accepted: 06/09/2021] [Indexed: 02/06/2023] Open
Abstract
The composition of wildlife communities can have strong effects on transmission of zoonotic vector-borne pathogens, with more diverse communities often supporting lower infection prevalence in vectors (dilution effect). The introduced Burmese python, Python bivittatus, is eliminating large and medium-sized mammals throughout southern Florida, USA, impacting local communities and the ecology of zoonotic pathogens. We investigated invasive predator-mediated impacts on ecology of Everglades virus (EVEV), a zoonotic pathogen endemic to Florida that circulates in mosquito-rodent cycle. Using binomial generalized linear mixed effects models of field data at areas of high and low python densities, we show that increasing diversity of dilution host (non-rodent mammals) is associated with decreasing blood meals on amplifying hosts (cotton rats), and that increasing cotton rat host use is associated with increasing EVEV infection in vector mosquitoes. The Burmese python has caused a dramatic decrease in mammal diversity in southern Florida, which has shifted vector host use towards EVEV amplifying hosts (rodents), resulting in an indirect increase in EVEV infection prevalence in vector mosquitoes, putatively elevating human transmission risk. Our results indicate that an invasive predator can impact wildlife communities in ways that indirectly affect human health, highlighting the need for conserving biological diversity and natural communities.
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Ferraguti M, Martínez-de la Puente J, Jiménez–Clavero MÁ, Llorente F, Roiz D, Ruiz S, Soriguer R, Figuerola J. A field test of the dilution effect hypothesis in four avian multi-host pathogens. PLoS Pathog 2021; 17:e1009637. [PMID: 34161394 PMCID: PMC8221496 DOI: 10.1371/journal.ppat.1009637] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 05/12/2021] [Indexed: 11/18/2022] Open
Abstract
The Dilution Effect Hypothesis (DEH) argues that greater biodiversity lowers the risk of disease and reduces the rates of pathogen transmission since more diverse communities harbour fewer competent hosts for any given pathogen, thereby reducing host exposure to the pathogen. DEH is expected to operate most intensely in vector-borne pathogens and when species-rich communities are not associated with increased host density. Overall, dilution will occur if greater species diversity leads to a lower contact rate between infected vectors and susceptible hosts, and between infected hosts and susceptible vectors. Field-based tests simultaneously analysing the prevalence of several multi-host pathogens in relation to host and vector diversity are required to validate DEH. We tested the relationship between the prevalence in house sparrows (Passer domesticus) of four vector-borne pathogens-three avian haemosporidians (including the avian malaria parasite Plasmodium and the malaria-like parasites Haemoproteus and Leucocytozoon) and West Nile virus (WNV)-and vertebrate diversity. Birds were sampled at 45 localities in SW Spain for which extensive data on vector (mosquitoes) and vertebrate communities exist. Vertebrate censuses were conducted to quantify avian and mammal density, species richness and evenness. Contrary to the predictions of DEH, WNV seroprevalence and haemosporidian prevalence were not negatively associated with either vertebrate species richness or evenness. Indeed, the opposite pattern was found, with positive relationships between avian species richness and WNV seroprevalence, and Leucocytozoon prevalence being detected. When vector (mosquito) richness and evenness were incorporated into the models, all the previous associations between WNV prevalence and the vertebrate community variables remained unchanged. No significant association was found for Plasmodium prevalence and vertebrate community variables in any of the models tested. Despite the studied system having several characteristics that should favour the dilution effect (i.e., vector-borne pathogens, an area where vector and host densities are unrelated, and where host richness is not associated with an increase in host density), none of the relationships between host species diversity and species richness, and pathogen prevalence supported DEH and, in fact, amplification was found for three of the four pathogens tested. Consequently, the range of pathogens and communities studied needs to be broadened if we are to understand the ecological factors that favour dilution and how often these conditions occur in nature.
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Affiliation(s)
- Martina Ferraguti
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
| | - Josué Martínez-de la Puente
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
| | - Miguel Ángel Jiménez–Clavero
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- Centro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA–CISA), Valdeolmos, Madrid, Spain
| | - Francisco Llorente
- Centro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA–CISA), Valdeolmos, Madrid, Spain
| | - David Roiz
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
| | - Santiago Ruiz
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- Diputación de Huelva, Área de Medio Ambiente, Servicio de Control de Mosquitos, Huelva, Spain
| | - Ramón Soriguer
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- Department of Ethology & Biodiversity Conservation, Doñana Biological Station (EBD–CSIC), Seville, Spain
| | - Jordi Figuerola
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- * E-mail:
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33
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Ratnadass A, Deguine JP. Crop protection practices and viral zoonotic risks within a One Health framework. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 774:145172. [PMID: 33610983 DOI: 10.1016/j.scitotenv.2021.145172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Revised: 01/10/2021] [Accepted: 01/10/2021] [Indexed: 06/12/2023]
Abstract
Recent viral zoonotic epidemics have been attributed partially to the negative impact of human activities on ecosystem biodiversity. Agricultural activities, particularly conventional crop protection (CP) practices, are a major threat to global biodiversity, ecosystem health and human health. Here we review interactions between CP practices and viral zoonoses (VZs), the first time this has been done. It should be noted that a) VZs stand at the interface between human, animal and ecosystem health; b) some VZs involve arthropod vectors that are affected by CP practices; and c) some crop pests, or their natural enemies are vertebrate reservoirs/carriers of certain VZs, and their contact with humans or domestic animals is affected by CP practices. Our review encompasses examples highlighting interactions between VZs and CP practices, both efficiency improvement-based (i.e. conventional with agrochemical insecticides and rodenticides), substitution-based (i.e. mainly with physical/mechanical or biopesticidal pest control), and redesign-based (i.e. mainly with conservation biological pest control, including some forms of crop-livestock integration). These CP practices mainly target arthropod and vertebrate pests. They also target, to a lesser extent, weeds and plant pathogens. Conventional and some physical/mechanical control methods and some forms of biopesticidal and crop-livestock integration practices were found to have mixed outcomes in terms of VZ risk management. Conversely, practices based on biological control by habitat conservation of arthropod or vertebrate natural enemies, falling within the Agroecological Crop Protection (ACP) framework, result in VZ prevention at various scales (local to global, and short-term to long-term). ACP addresses major global challenges including climate resilience, biodiversity conservation and animal welfare, and helps integrate plant health within the extended "One Health" concept.
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Affiliation(s)
- Alain Ratnadass
- CIRAD, UPR HortSys, F-97455 Saint-Pierre, Réunion, France; HortSys, Univ Montpellier, CIRAD, Montpellier, France.
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Schindell BG, Allardice M, Lockman S, Kindrachuk J. Integrating Proteomics for Facilitating Drug Identification and Repurposing During an Emerging Virus Pandemic. ACS Infect Dis 2021; 7:1303-1316. [PMID: 33319978 DOI: 10.1021/acsinfecdis.0c00579] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
The coronavirus disease 2019 (COVID-19) pandemic has disrupted global healthcare and economic systems throughout 2020 with no clear end in sight. While the pandemic continues to have deleterious effects across the globe, mechanisms for disrupting disease transmission have relied on behavioral controls (e.g., social distancing, masks, and hygiene) as there are currently no vaccines approved for use and limited therapeutic options. As this pandemic has demonstrated our vulnerability to newly emerging viruses, there has been strong interest in utilizing proteomics approaches to identify targets for repurposed drugs as novel therapeutic candidates that could be fast-tracked for human use. Building on a previous discussion on the combination of proteomics technologies with clinical data for combating emerging viruses, we discuss how these technologies are being employed for COVID-19 and the current state of knowledge regarding repurposed drugs in these efforts.
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Affiliation(s)
- Brayden G. Schindell
- Laboratory of Emerging and Re-Emerging Viruses, Department of Medical Microbiology & Infectious Diseases, University of Manitoba, Winnipeg R3T 2N2, Canada
| | - Meagan Allardice
- Laboratory of Emerging and Re-Emerging Viruses, Department of Medical Microbiology & Infectious Diseases, University of Manitoba, Winnipeg R3T 2N2, Canada
| | - Sandhini Lockman
- Regenerative Medicine Program, Department of Biochemistry and Medical Genetics, University of Manitoba, Winnipeg R3T 2N2, Canada
| | - Jason Kindrachuk
- Laboratory of Emerging and Re-Emerging Viruses, Department of Medical Microbiology & Infectious Diseases, University of Manitoba, Winnipeg R3T 2N2, Canada
- Vaccine and Infectious Disease Organization−International Vaccine Centre (VIDO-InterVac, University of Saskatchewan, Saskatoon S7N 5E3, Canada
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35
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Garrido M, Halle S, Flatau R, Cohen C, Navarro-Castilla Á, Barja I, Hawlena H. The dilution effect behind the scenes: testing the underlying assumptions of its mechanisms through quantifying the long-term dynamics and effects of a pathogen in multiple host species. Proc Biol Sci 2021; 288:20210773. [PMID: 34102894 PMCID: PMC8187991 DOI: 10.1098/rspb.2021.0773] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 05/12/2021] [Indexed: 01/01/2023] Open
Abstract
Disentangling the mechanisms that mediate the relationships between species diversity and disease risk has both theoretical and applied implications. We employed a model system of rodents and their Mycoplasma pathogens, in which an extreme negative diversity-disease relationship was demonstrated, to test the assumptions underlying three mechanisms that may explain this field pattern. Through quantifying the long-term dynamics and effects of the pathogen in its three host species, we estimated the between-host differences in pathogen spreading and transmission potentials, and host recovery potential and vulnerability to infection. The results suggest that one of the hosts is a pathogen amplifier and the other two hosts function as diluters. Considering the similarity in infection success and intensity among hosts, and the failure to detect any pathogen-induced damage, we could not validate the assumption underlying the hypotheses that diluters reduce the overall transmission or increase the mortality of infected hosts in the system. Instead, the results demonstrate that diluters clear the infection faster than amplifiers, supporting the possibility that the addition of diluters to the community may reduce the overall number of infected hosts through this mechanism. This study highlights the contribution of experimental studies that simultaneously explore different aspects of host-pathogen interactions in multiple hosts, in diversity-disease research.
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Affiliation(s)
- Mario Garrido
- Jacob Blaustein Center for Scientific Cooperation, Ben-Gurion University of the Negev, 849900 Midreshet Ben-Gurion, Israel
| | - Snir Halle
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, 849900 Midreshet Ben-Gurion, Israel
| | - Ron Flatau
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, 849900 Midreshet Ben-Gurion, Israel
| | - Carmit Cohen
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, 849900 Midreshet Ben-Gurion, Israel
| | - Álvaro Navarro-Castilla
- Etho-Physiology Group. Unit of Zoology. Department of Biology. Faculty of Sciences, the Autonomous University of Madrid, Spain
| | - Isabel Barja
- Etho-Physiology Group. Unit of Zoology. Department of Biology. Faculty of Sciences, the Autonomous University of Madrid, Spain
- Center for Research on Biodiversity and Global Change (CIBC-UAM), the Autonomous University of Madrid, Spain
| | - Hadas Hawlena
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, 849900 Midreshet Ben-Gurion, Israel
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Cortez MH, Duffy MA. The Context-Dependent Effects of Host Competence, Competition, and Pathogen Transmission Mode on Disease Prevalence. Am Nat 2021; 198:179-194. [PMID: 34260871 DOI: 10.1086/715110] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
AbstractBiodiversity in communities is changing globally, including the gain and loss of host species in host-pathogen communities. Increased host diversity can cause infection prevalence in a focal host to increase (amplification) or decrease (dilution). However, it is unclear what general rules govern the context-dependent effects, in part because theories for pathogens with different transmission modes have developed largely independently. Using a two-host model, we explore how the pathogen transmission mode and characteristics of a second host (disease competence and competitive ability) influence disease prevalence in a focal host. Our work shows how the theories for pathogens with environmental transmission, density-dependent direct transmission, and frequency-dependent direct transmission can be unified. Our work also identifies general rules about how host and pathogen characteristics affect amplification/dilution. For example, higher-competence hosts promote amplification, unless they are strong interspecific competitors; strong interspecific competitors promote dilution, unless they are large sources of new infections; and dilution occurs under frequency-dependent direct transmission more than density-dependent direct transmission, unless interspecific host competition is sufficiently strong. Our work helps explain how the characteristics of the pathogen and a second host affect disease prevalence in a focal host.
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Santos WS, Gurgel-Gonçalves R, Garcez LM, Abad-Franch F. Deforestation effects on Attalea palms and their resident Rhodnius, vectors of Chagas disease, in eastern Amazonia. PLoS One 2021; 16:e0252071. [PMID: 34015050 PMCID: PMC8136634 DOI: 10.1371/journal.pone.0252071] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Accepted: 05/07/2021] [Indexed: 01/05/2023] Open
Abstract
Attalea palms provide primary habitat to Rhodnius spp., vectors of Trypanosoma cruzi. Flying from palms, these blood-sucking bugs often invade houses and can infect people directly or via food contamination. Chagas disease (CD) risk may therefore increase when Attalea palms thrive near houses. For example, Attalea dominate many deforested landscapes of eastern Amazonia, where acute-CD outbreaks are disturbingly frequent. Despite this possible link between deforestation and CD risk, the population-level responses of Amazonian Attalea and their resident Rhodnius to anthropogenic landscape disturbance remain largely uncharted. We studied adult Attalea palms in old-growth forest (OGF), young secondary forest (YSF), and cattle pasture (CP) in two localities of eastern Amazonia. We recorded 1856 Attalea along 10 transects (153.6 ha), and detected infestation by Rhodnius spp. in 18 of 280 systematically-sampled palms (33 bugs caught). Distance-sampling models suggest that, relative to OGF, adult Attalea density declined by 70-80% in CP and then recovered in YSF. Site-occupancy models estimate a strong positive effect of deforestation on palm-infestation odds (βCP-infestation = 4.82±1.14 SE), with a moderate decline in recovering YSF (βYSF-infestation = 2.66±1.10 SE). Similarly, N-mixture models suggest that, relative to OGF, mean vector density sharply increased in CP palms (βCP-density = 3.20±0.62 SE) and then tapered in YSF (βYSF-density = 1.61±0.76 SE). Together, these results indicate that disturbed landscapes may support between ~2.5 (YSF) and ~5.1 (CP) times more Attalea-dwelling Rhodnius spp. per unit area than OGF. We provide evidence that deforestation may favor palm-dwelling CD vectors in eastern Amazonia. Importantly, our landscape-disturbance effect estimates explicitly take account of (i) imperfect palm and bug detection and (ii) the uncertainties about infestation and vector density arising from sparse bug data. These results suggest that incorporating landscape-disturbance metrics into the spatial stratification of transmission risk could help enhance CD surveillance and prevention in Amazonia.
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Affiliation(s)
- Walter Souza Santos
- Laboratório de Epidemiologia das Leishmanioses, Instituto Evandro Chagas, Secretaria de Vigilância em Saúde, Ministério da Saúde, Ananindeua, Pará, Brazil
- Programa de Pós-graduação em Biologia Parasitária na Amazônia, Universidade do Estado do Pará, Belém, Pará, Brazil
| | - Rodrigo Gurgel-Gonçalves
- Núcleo de Medicina Tropical, Faculdade de Medicina, Universidade de Brasília, Brasília, Distrito Federal, Brazil
- Laboratório de Parasitologia Médica e Biologia de Vetores, Faculdade de Medicina, Universidade de Brasília, Brasília, Distrito Federal, Brazil
| | - Lourdes Maria Garcez
- Laboratório de Epidemiologia das Leishmanioses, Instituto Evandro Chagas, Secretaria de Vigilância em Saúde, Ministério da Saúde, Ananindeua, Pará, Brazil
- Programa de Pós-graduação em Biologia Parasitária na Amazônia, Universidade do Estado do Pará, Belém, Pará, Brazil
- Departamento de Patologia, Universidade do Estado do Pará, Belém, Pará, Brazil
| | - Fernando Abad-Franch
- Programa de Pós-graduação em Biologia Parasitária na Amazônia, Universidade do Estado do Pará, Belém, Pará, Brazil
- Núcleo de Medicina Tropical, Faculdade de Medicina, Universidade de Brasília, Brasília, Distrito Federal, Brazil
- Grupo Triatomíneos, Instituto René Rachou–Fiocruz, Belo Horizonte, Minas Gerais, Brazil
- * E-mail:
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Cortez MH. Using sensitivity analysis to identify factors promoting higher versus lower infection prevalence in multi-host communities. J Theor Biol 2021; 526:110766. [PMID: 34019849 DOI: 10.1016/j.jtbi.2021.110766] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 05/04/2021] [Accepted: 05/12/2021] [Indexed: 10/21/2022]
Abstract
Relationships between host species richness and levels of disease in a focal host are likely to be context-dependent, depending on the characteristics of which particular host species are present in a community. I use a multi-host epidemiological model with environmental transmission to explore how the characteristics of the host species (e.g., competence and competitive ability), host density, and the pathogen transmission mechanism affect the proportion of infected individuals (i.e., infection prevalence) in a focal host. My sensitivity-based approach identifies the indirect pathways through which specific ecological and epidemiological processes affect focal host infection prevalence. This in turn yields predictions about the context-dependent rules governing whether increased host species richness increases (amplifies) or decreases (dilutes) infection prevalence in a focal host. For example, in many cases, amplification and dilution are predicted to occur when added host species are sources or sinks of infectious propagules, respectively. However, if the added host species have strong and asymmetric competitive effects on resident host species, then amplification and dilution are predicted to occur when the added host species have stronger competitive effects on resident host species that are sources or sinks of infectious propagules, respectively. My results also predict that greater dilution and less amplification is more likely to occur under frequency-dependent direct transmission than density-dependent direct transmission when (i) the added hosts have lower competence than resident host species and (ii) interspecific competition between the added host species and resident host species is lower; the opposite conditions promote greater amplification and less dilution under frequency-dependent direct transmission. This work helps identify and explain the mechanisms shaping the context-dependent relationships between host species richness and disease in multi-host communities.
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Affiliation(s)
- Michael H Cortez
- Depart of Biological Science, Florida State University, Tallahassee, FL 32306, United States.
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de Thoisy B, Duron O, Epelboin L, Musset L, Quénel P, Roche B, Binetruy F, Briolant S, Carvalho L, Chavy A, Couppié P, Demar M, Douine M, Dusfour I, Epelboin Y, Flamand C, Franc A, Ginouvès M, Gourbière S, Houël E, Kocher A, Lavergne A, Le Turnier P, Mathieu L, Murienne J, Nacher M, Pelleau S, Prévot G, Rousset D, Roux E, Schaub R, Talaga S, Thill P, Tirera S, Guégan JF. Ecology, evolution, and epidemiology of zoonotic and vector-borne infectious diseases in French Guiana: Transdisciplinarity does matter to tackle new emerging threats. INFECTION GENETICS AND EVOLUTION 2021; 93:104916. [PMID: 34004361 DOI: 10.1016/j.meegid.2021.104916] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2021] [Revised: 05/09/2021] [Accepted: 05/12/2021] [Indexed: 02/06/2023]
Abstract
French Guiana is a European ultraperipheric region located on the northern Atlantic coast of South America. It constitutes an important forested region for biological conservation in the Neotropics. Although very sparsely populated, with its inhabitants mainly concentrated on the Atlantic coastal strip and along the two main rivers, it is marked by the presence and development of old and new epidemic disease outbreaks, both research and health priorities. In this review paper, we synthetize 15 years of multidisciplinary and integrative research at the interface between wildlife, ecosystem modification, human activities and sociodemographic development, and human health. This study reveals a complex epidemiological landscape marked by important transitional changes, facilitated by increased interconnections between wildlife, land-use change and human occupation and activity, human and trade transportation, demography with substantial immigration, and identified vector and parasite pharmacological resistance. Among other French Guianese characteristics, we demonstrate herein the existence of more complex multi-host disease life cycles than previously described for several disease systems in Central and South America, which clearly indicates that today the greater promiscuity between wildlife and humans due to demographic and economic pressures may offer novel settings for microbes and their hosts to circulate and spread. French Guiana is a microcosm that crystallizes all the current global environmental, demographic and socioeconomic change conditions, which may favor the development of ancient and future infectious diseases.
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Affiliation(s)
- Benoît de Thoisy
- Laboratoire des Interactions Virus-Hôtes, Institut Pasteur de la Guyane, Cayenne Cedex, French Guiana.
| | - Olivier Duron
- UMR MIVEGEC, IRD, CNRS, Université de Montpellier, Centre IRD de Montpellier, Montpellier, France; Centre de Recherche en Écologie et Évolution de la Santé, Montpellier, France
| | - Loïc Epelboin
- Infectious Diseases Department, Centre Hospitalier de Cayenne, Cayenne, French Guiana
| | - Lise Musset
- Laboratoire de Parasitologie, Centre Collaborateur OMS Pour La Surveillance Des Résistances Aux Antipaludiques, Centre National de Référence du Paludisme, Pôle zones Endémiques, Institut Pasteur de la Guyane, Cayenne, French Guiana
| | - Philippe Quénel
- Université de Rennes, Inserm, EHESP, Irset (Institut de recherche en santé, environnement et travail), UMR-S 1085 Rennes, France
| | - Benjamin Roche
- UMR MIVEGEC, IRD, CNRS, Université de Montpellier, Centre IRD de Montpellier, Montpellier, France; Centre de Recherche en Écologie et Évolution de la Santé, Montpellier, France
| | - Florian Binetruy
- UMR MIVEGEC, IRD, CNRS, Université de Montpellier, Centre IRD de Montpellier, Montpellier, France
| | - Sébastien Briolant
- Unité Parasitologie et Entomologie, Département Microbiologie et Maladies Infectieuses, Institut de Recherche Biomédicale des Armées, Marseille, France; Aix Marseille Université, IRD, SSA, AP-HM, UMR Vecteurs - Infections Tropicales et Méditerranéennes (VITROME), France; IHU Méditerranée Infection, Marseille, France
| | | | - Agathe Chavy
- Laboratoire des Interactions Virus-Hôtes, Institut Pasteur de la Guyane, Cayenne Cedex, French Guiana
| | - Pierre Couppié
- Dermatology Department, Centre Hospitalier de Cayenne, Cayenne, French Guiana
| | - Magalie Demar
- TBIP, Université de Guyane, Cayenne, French Guiana; Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR 9017-CIIL Centre d'Infection et d'Immunité de Lille, Lille, France
| | - Maylis Douine
- Centre d'Investigation Clinique Antilles-Guyane, Inserm 1424, Centre Hospitalier de Cayenne, Cayenne, French Guiana
| | - Isabelle Dusfour
- Département de Santé Globale, Institut Pasteur, Paris, France; Institut Pasteur de la Guyane, Vectopôle Amazonien Emile Abonnenc, Cayenne, French Guiana
| | - Yanouk Epelboin
- Institut Pasteur de la Guyane, Vectopôle Amazonien Emile Abonnenc, Cayenne, French Guiana
| | - Claude Flamand
- Epidemiology Unit, Institut Pasteur de la Guyane, Cayenne, French Guiana; Mathematical Modelling of Infectious Diseases Unit, Institut Pasteur, UMR 2000, CNRS, Paris, France
| | - Alain Franc
- UMR BIOGECO, INRAE, Université de Bordeaux, Cestas, France; Pleiade, EPC INRIA-INRAE-CNRS, Université de Bordeaux Talence, France
| | - Marine Ginouvès
- TBIP, Université de Guyane, Cayenne, French Guiana; Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR 9017-CIIL Centre d'Infection et d'Immunité de Lille, Lille, France
| | - Sébastien Gourbière
- UMR 5096 Laboratoire Génome et Développement des Plantes, Université de Perpignan Via Domitia, Perpignan, France
| | - Emeline Houël
- CNRS, UMR EcoFoG, AgroParisTech, Cirad, INRAE, Université des Antilles, Université de Guyane, Cayenne, France
| | - Arthur Kocher
- Transmission, Infection, Diversification & Evolution Group, Max-Planck Institute for the Science of Human History, Kahlaische Str. 10, 07745 Jena, Germany; Laboratoire Evolution et Diversité Biologique (UMR 5174), Université de Toulouse, CNRS, IRD, UPS, Toulouse, France
| | - Anne Lavergne
- Laboratoire des Interactions Virus-Hôtes, Institut Pasteur de la Guyane, Cayenne Cedex, French Guiana
| | - Paul Le Turnier
- Service de Maladies Infectieuses et Tropicales, Hôtel Dieu - INSERM CIC 1413, Centre Hospitalier Universitaire de Nantes, Nantes, France
| | - Luana Mathieu
- Université de Rennes, Inserm, EHESP, Irset (Institut de recherche en santé, environnement et travail), UMR-S 1085 Rennes, France
| | - Jérôme Murienne
- Laboratoire Evolution et Diversité Biologique (UMR 5174), Université de Toulouse, CNRS, IRD, UPS, Toulouse, France
| | - Mathieu Nacher
- Centre d'Investigation Clinique Antilles-Guyane, Inserm 1424, Centre Hospitalier de Cayenne, Cayenne, French Guiana
| | - Stéphane Pelleau
- Université de Rennes, Inserm, EHESP, Irset (Institut de recherche en santé, environnement et travail), UMR-S 1085 Rennes, France; Malaria: Parasites and Hosts, Institut Pasteur, Paris, France
| | - Ghislaine Prévot
- TBIP, Université de Guyane, Cayenne, French Guiana; Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR 9017-CIIL Centre d'Infection et d'Immunité de Lille, Lille, France
| | - Dominique Rousset
- Laboratoire de Virologie, Institut Pasteur de la Guyane, Cayenne Cedex, French Guiana
| | - Emmanuel Roux
- ESPACE-DEV (Institut de Recherche pour le Développement, Université de la Réunion, Université des Antilles, Université de Guyane, Université de Montpellier, Montpellier, France; International Joint Laboratory "Sentinela" Fundação Oswaldo Cruz, Universidade de Brasília, Institut de Recherche pour le Développement, Rio de Janeiro RJ-21040-900, Brazil
| | - Roxane Schaub
- TBIP, Université de Guyane, Cayenne, French Guiana; Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR 9017-CIIL Centre d'Infection et d'Immunité de Lille, Lille, France; Centre d'Investigation Clinique Antilles-Guyane, Inserm 1424, Centre Hospitalier de Cayenne, Cayenne, French Guiana
| | - Stanislas Talaga
- UMR MIVEGEC, IRD, CNRS, Université de Montpellier, Centre IRD de Montpellier, Montpellier, France; Institut Pasteur de la Guyane, Vectopôle Amazonien Emile Abonnenc, Cayenne, French Guiana
| | - Pauline Thill
- Service Universitaire des Maladies Infectieuses et du Voyageur, Centre Hospitalier Dron, Tourcoing, France
| | - Sourakhata Tirera
- Laboratoire des Interactions Virus-Hôtes, Institut Pasteur de la Guyane, Cayenne Cedex, French Guiana
| | - Jean-François Guégan
- UMR MIVEGEC, IRD, CNRS, Université de Montpellier, Centre IRD de Montpellier, Montpellier, France; UMR ASTRE, INRAE, CIRAD, Université de Montpellier, Montpellier, France.
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Mari L, Casagrandi R, Bertuzzo E, Pasetto D, Miccoli S, Rinaldo A, Gatto M. The epidemicity index of recurrent SARS-CoV-2 infections. Nat Commun 2021; 12:2752. [PMID: 33980858 PMCID: PMC8115165 DOI: 10.1038/s41467-021-22878-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Accepted: 03/30/2021] [Indexed: 01/29/2023] Open
Abstract
Several indices can predict the long-term fate of emerging infectious diseases and the effect of their containment measures, including a variety of reproduction numbers (e.g. [Formula: see text]). Other indices evaluate the potential for transient increases of epidemics eventually doomed to disappearance, based on generalized reactivity analysis. They identify conditions for perturbations to a stable disease-free equilibrium ([Formula: see text]) to grow, possibly causing significant damage. Here, we introduce the epidemicity index e0, a threshold-type indicator: if e0 > 0, initial foci may cause infection peaks even if [Formula: see text]. Therefore, effective containment measures should achieve a negative epidemicity index. We use spatially explicit models to rank containment measures for projected evolutions of the ongoing pandemic in Italy. There, we show that, while the effective reproduction number was below one for a sizable timespan, epidemicity remained positive, allowing recurrent infection flare-ups well before the major epidemic rebounding observed in the fall.
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Affiliation(s)
- Lorenzo Mari
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milano, Italy.
| | - Renato Casagrandi
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milano, Italy
| | - Enrico Bertuzzo
- Dipartimento di Scienze Ambientali, Informatica e Statistica, Università Ca' Foscari Venezia, Venice, Italy
| | - Damiano Pasetto
- Dipartimento di Scienze Ambientali, Informatica e Statistica, Università Ca' Foscari Venezia, Venice, Italy
| | - Stefano Miccoli
- Dipartimento di Meccanica, Politecnico di Milano, Milano, Italy
| | - Andrea Rinaldo
- Laboratory of Ecohydrology, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
- Dipartimento ICEA, Università di Padova, Padua, Italy.
| | - Marino Gatto
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milano, Italy.
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Young KI, Buenemann M, Vasilakis N, Perera D, Hanley KA. Shifts in mosquito diversity and abundance along a gradient from oil palm plantations to conterminous forests in Borneo. Ecosphere 2021; 12. [PMID: 33996190 DOI: 10.1002/ecs2.3463] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
Deforestation precipitates spillover of enzootic, vector-borne viruses into humans, but specific mechanisms for this effect have rarely been investigated. Expansion of oil palm cultivation is a major driver of deforestation. Here, we demonstrate that mosquito abundance decreased over ten stepwise distances from interior forest into conterminous palm plantations in Borneo. Diversity in interior plantation narrowed to one species, Aedes albopictus, a potential bridge vector for spillover of multiple viruses. A. albopictus was equally abundant across all distances in forests, forest-plantation edge, and plantations, while A. niveus, a known vector of sylvatic dengue virus, was found only in forests. A. albopictus collections were significantly female-biased in plantation but not in edge or forest. Our data reveal that the likelihood of encountering any mosquito is greater in interior forest and edge than plantation, while the likelihood of encountering A. albopictus is equivalent across the gradient sampled from interior plantation to interior forest.
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Affiliation(s)
- Katherine I Young
- Department of Biology, New Mexico State University, 1780 E University Ave, Las Cruces, New Mexico 88003 USA
| | - Michaela Buenemann
- Department of Geography, New Mexico State University, 1780 E University Ave, Las Cruces, New Mexico 88003 USA
| | - Nikos Vasilakis
- Department of Pathology, Center for Biodefense and Emerging Infectious Diseases, Center of Tropical Diseases, and Institute for Human Infections and Immunity, The University of Texas Medical Branch, 301 University Boulevard, Galveston, Texas 77555 USA
| | - David Perera
- Institute of Health and Community Medicine, Universiti Malaysia Sarawak, Jalan Datuk Mohammad Musa, 94300 Kota Samarahan, Sarawak, Malaysia
| | - Kathryn A Hanley
- Department of Biology, New Mexico State University, 1780 E University Ave, Las Cruces, New Mexico 88003 USA
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Abstract
Zoonotic diseases are infectious diseases of humans caused by pathogens that are shared between humans and other vertebrate animals. Previously, pristine natural areas with high biodiversity were seen as likely sources of new zoonotic pathogens, suggesting that biodiversity could have negative impacts on human health. At the same time, biodiversity has been recognized as potentially benefiting human health by reducing the transmission of some pathogens that have already established themselves in human populations. These apparently opposing effects of biodiversity in human health may now be reconcilable. Recent research demonstrates that some taxa are much more likely to be zoonotic hosts than others are, and that these animals often proliferate in human-dominated landscapes, increasing the likelihood of spillover. In less-disturbed areas, however, these zoonotic reservoir hosts are less abundant and nonreservoirs predominate. Thus, biodiversity loss appears to increase the risk of human exposure to both new and established zoonotic pathogens. This new synthesis of the effects of biodiversity on zoonotic diseases presents an opportunity to articulate the next generation of research questions that can inform management and policy. Future studies should focus on collecting and analyzing data on the diversity, abundance, and capacity to transmit of the taxa that actually share zoonotic pathogens with us. To predict and prevent future epidemics, researchers should also focus on how these metrics change in response to human impacts on the environment, and how human behaviors can mitigate these effects. Restoration of biodiversity is an important frontier in the management of zoonotic disease risk.
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Fearon ML, Tibbetts EA. Pollinator community species richness dilutes prevalence of multiple viruses within multiple host species. Ecology 2021; 102:e03305. [PMID: 33571384 DOI: 10.1002/ecy.3305] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Accepted: 11/24/2020] [Indexed: 01/01/2023]
Abstract
Most pathogens are embedded in complex communities composed of multiple interacting hosts, but we are still learning how community-level factors, such as host diversity, abundance, and composition, contribute to pathogen spread for many host-pathogen systems. Evaluating relationships among multiple pathogens and hosts may clarify whether particular host or pathogen traits consistently drive links between community factors and pathogen prevalence. Pollinators are a good system to test how community composition influences pathogen spread because pollinator communities are extremely variable and contain several multi-host pathogens transmitted on shared floral resources. We conducted a field survey of four pollinator species to test the prevalence of three RNA viruses (deformed wing virus, black queen cell virus, and sacbrood virus) among pollinator communities with variable species richness, abundance, and composition. All three viruses showed a similar pattern of prevalence among hosts. Apis mellifera and Bombus impatiens had significantly higher viral prevalence than Lasioglossum spp. and Eucera pruinosa. In each species, lower virus prevalence was most strongly linked with greater pollinator community species richness. In contrast, pollinator abundance, species-specific pollinator abundance, and community composition were not associated with virus prevalence. Our results support a consistent dilution effect for multiple viruses and host species. Pollinators in species-rich communities had lower viral prevalence than pollinators from species-poor communities, when accounting for differences in pollinator abundance. Species-rich communities likely had lower viral prevalence because species-rich communities contained more native bee species likely to be poor viral hosts than species-poor communities, and all communities contained the highly competent hosts A. mellifera and B. impatiens. Interestingly, the strength of the dilution effect was not consistent among hosts. Instead, host species with low viral prevalence exhibited weaker dilution effects compared to hosts with high viral prevalence. Therefore, host species susceptibility and competence for each virus may contribute to variation in the strength of dilution effects. This study expands biodiversity-disease studies to the pollinator-virus system, finding consistent evidence of the dilution effect among multiple similar pathogens that infect "replicate" host communities.
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Affiliation(s)
- Michelle L Fearon
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, 48109, USA
| | - Elizabeth A Tibbetts
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, 48109, USA
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Pontzer H. Hotter and sicker: External energy expenditure and the tangled evolutionary roots of anthropogenic climate change and chronic disease. Am J Hum Biol 2021; 33:e23579. [PMID: 33629785 DOI: 10.1002/ajhb.23579] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Revised: 12/07/2020] [Accepted: 01/25/2021] [Indexed: 02/06/2023] Open
Abstract
BACKGROUND The dual crises of climate change and chronic, or non-communicable, disease (NCD) have emerged worldwide as the global economy has industrialized over the past two centuries. AIMS In this synthesis I examine humans' dependence on external (non-metabolic) energy expenditure (e.g., fire, fossil fuels) as a common, root cause in these modern crises. MATERIALS AND METHODS Using fossil, archeological, and historical evidence I show that the human lineage has been dependent on external energy sources since the control of fire in the Paleolithic. This reliance has grown with the development of agriculture, the use of wind- and water-power, and the most recently with industrialization and the transition to fossil fuels. To place industrialization in context I develop a Rule of 50, whereby individuals in industrialized economies consume roughly 50-times more external energy and manufacture roughly 50-times more material than do hunter-gatherers. RESULTS Industrialization and mechanization, powered by fossil fuels, have promoted centralization and processing in food production, reduced physical activity, and increased air pollution (including greenhouse gas emissions). These developments have led in turn to NCD and climate change. DISCUSSION AND CONCLUSION Climate change and NCD are connected both to one another and to our species' deep evolutionary dependence on external energy. Transitioning to carbon-free energy is essential to reduce the existential risks of climate change, but will likely have only modest effects on NCD. With the impending exhaustion of oil, coal, and natural gas reserves, developing replacements for fossil fuels is also critical to maintaining our species' external energy portfolio.
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Affiliation(s)
- Herman Pontzer
- Department of Evolutionary Anthropology, Duke Global Health Institute, Duke University, Durham, North Carolina, USA
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45
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Fernández D, Giné-Vázquez I, Liu I, Yucel R, Nai Ruscone M, Morena M, García VG, Haro JM, Pan W, Tyrovolas S. Are environmental pollution and biodiversity levels associated to the spread and mortality of COVID-19? A four-month global analysis. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 271:116326. [PMID: 33412447 PMCID: PMC7752029 DOI: 10.1016/j.envpol.2020.116326] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2020] [Revised: 12/10/2020] [Accepted: 12/14/2020] [Indexed: 05/19/2023]
Abstract
On March 12th, 2020, the WHO declared COVID-19 as a pandemic. The collective impact of environmental and ecosystem factors, as well as biodiversity, on the spread of COVID-19 and its mortality evolution remain empirically unknown, particularly in regions with a wide ecosystem range. The aim of our study is to assess how those factors impact on the COVID-19 spread and mortality by country. This study compiled a global database merging WHO daily case reports with other publicly available measures from January 21st to May 18th, 2020. We applied spatio-temporal models to identify the influence of biodiversity, temperature, and precipitation and fitted generalized linear mixed models to identify the effects of environmental variables. Additionally, we used count time series to characterize the association between COVID-19 spread and air quality factors. All analyses were adjusted by social demographic, country-income level, and government policy intervention confounders, among 160 countries, globally. Our results reveal a statistically meaningful association between COVID-19 infection and several factors of interest at country and city levels such as the national biodiversity index, air quality, and pollutants elements (PM10, PM2.5, and O3). Particularly, there is a significant relationship of loss of biodiversity, high level of air pollutants, and diminished air quality with COVID-19 infection spread and mortality. Our findings provide an empirical foundation for future studies on the relationship between air quality variables, a country's biodiversity, and COVID-19 transmission and mortality. The relationships measured in this study can be valuable when governments plan environmental and health policies, as alternative strategy to respond to new COVID-19 outbreaks and prevent future crises.
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Affiliation(s)
- Daniel Fernández
- Serra Húnter Fellow, Department of Statistics and Operations Research, Universitat Politècnica de Catalunya-BarcelonaTech, 08028, Spain.
| | - Iago Giné-Vázquez
- Instituto de Salud Carlos III, Centro de Investigación Biomédica en Red de Salud Mental, CIBERSAM, Monforte de Lemos 3-5, Pabellón 11, 28029, Madrid, Spain, Barcelona, Spain; Parc Sanitari Sant Joan de Déu, Universitat de Barcelona, Fundació Sant Joan de Déu, Dr Antoni Pujades, 42, 08830, Sant Boi de Llobregat, Barcelona, Spain
| | - Ivy Liu
- School of Mathematics and Statistics, Victoria University of Wellington, Wellington, 6012, New Zealand
| | - Recai Yucel
- Department of Epidemiology and Biostatistics, College of Public Health, Temple University, Philadelphia, PA, 19122, USA
| | - Marta Nai Ruscone
- Department of Mathematics - DIMA, University of Genova, 16146, Genova, Italy
| | - Marianthi Morena
- Department of Nutrition and Dietetics, School of Health Sciences and Education, Harokopio University, Athens, Greece
| | - Víctor Gerardo García
- Department of Materials Science and Engineering, Universitat Politècnica de Catalunya-BarcelonaTech, EEBE, A6.5, 08019, Barcelona, Spain; Fundació Eurecat, Plaça de la Ciència, 2, 08243, Manresa, Barcelona, Spain
| | - Josep Maria Haro
- Instituto de Salud Carlos III, Centro de Investigación Biomédica en Red de Salud Mental, CIBERSAM, Monforte de Lemos 3-5, Pabellón 11, 28029, Madrid, Spain, Barcelona, Spain; Parc Sanitari Sant Joan de Déu, Universitat de Barcelona, Fundació Sant Joan de Déu, Dr Antoni Pujades, 42, 08830, Sant Boi de Llobregat, Barcelona, Spain; King Saud University, Riyadh, Saudi Arabia
| | - William Pan
- Global Health Institute, Duke University, Durham, NC, 27708, USA; Nicholas School of the Environment, Duke University, Durham, NC, 27708, USA
| | - Stefanos Tyrovolas
- Instituto de Salud Carlos III, Centro de Investigación Biomédica en Red de Salud Mental, CIBERSAM, Monforte de Lemos 3-5, Pabellón 11, 28029, Madrid, Spain, Barcelona, Spain; Parc Sanitari Sant Joan de Déu, Universitat de Barcelona, Fundació Sant Joan de Déu, Dr Antoni Pujades, 42, 08830, Sant Boi de Llobregat, Barcelona, Spain; School of Nursing, The Hong Kong Polytechnic University, Hong Kong SAR, China
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46
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Biodiversity loss and COVID-19 pandemic: The role of bats in the origin and the spreading of the disease. Biochem Biophys Res Commun 2021; 538:2-13. [PMID: 33092787 PMCID: PMC7566801 DOI: 10.1016/j.bbrc.2020.10.028] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Accepted: 10/14/2020] [Indexed: 12/15/2022]
Abstract
The loss of biodiversity in the ecosystems has created the general conditions that have favored and, in fact, made possible, the insurgence of the COVID-19 pandemic. A lot of factors have contributed to it: deforestation, changes in forest habitats, poorly regulated agricultural surfaces, mismanaged urban growth. They have altered the composition of wildlife communities, greatly increased the contacts of humans with wildlife, and altered niches that harbor pathogens, increasing their chances to come in contact with humans. Among the wildlife, bats have adapted easily to anthropized environments such as houses, barns, cultivated fields, orchards, where they found the suitable ecosystem to prosper. Bats are major hosts for αCoV and βCoV: evolution has shaped their peculiar physiology and their immune system in a way that makes them resistant to viral pathogens that would instead successfully attack other species, including humans. In time, the coronaviruses that bats host as reservoirs have undergone recombination and other modifications that have increased their ability for inter-species transmission: one modification of particular importance has been the development of the ability to use ACE2 as a receptor in host cells. This particular development in CoVs has been responsible for the serious outbreaks in the last two decades, and for the present COVID-19 pandemic.
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47
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Min KD, Kim H, Hwang SS, Cho S, Schneider MC, Hwang J, Cho SI. Protective effect of predator species richness on human hantavirus infection incidence. Sci Rep 2020; 10:21744. [PMID: 33303876 PMCID: PMC7728771 DOI: 10.1038/s41598-020-78765-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Accepted: 11/30/2020] [Indexed: 11/09/2022] Open
Abstract
Are predators of rodents beneficial for public health? This question focuses on whether predators regulate the spillover transmission of rodent-borne diseases. No clear answer has emerged because of the complex linkages across multiple trophic levels and the lack of accessible data. Although previous empirical findings have suggested ecological mechanisms, such as resource partitioning, which implies protective effects from predator species richness, epidemiological evidence is needed to bolster these arguments. Thus, we investigated the association between predator species richness and incidence of rodent-borne haemorrhagic fever with renal syndrome in the human population using district-level longitudinal data of 13 years for South Korea. With the exception of districts with low species richness, we found a significant negative association between the incidence of haemorrhagic fever with renal syndrome and the species richness of both avian and mammalian predators; the trends for both predator types were similar. Thus, biodiversity conservation may benefit public health.
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Affiliation(s)
- Kyung-Duk Min
- Institute of Health and Environment, Graduate School of Public Health, Seoul National University, Seoul, South Korea
| | - Ho Kim
- Institute of Health and Environment, Graduate School of Public Health, Seoul National University, Seoul, South Korea.,Department of Public Health Science, Graduate School of Public Health, Seoul National University, Seoul, South Korea
| | - Seung-Sik Hwang
- Institute of Health and Environment, Graduate School of Public Health, Seoul National University, Seoul, South Korea.,Department of Public Health Science, Graduate School of Public Health, Seoul National University, Seoul, South Korea
| | - Seongbeom Cho
- College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul, South Korea
| | - Maria Cristina Schneider
- Department of International Health, School of Nursing and Health Sciences, Georgetown University, Washington, DC, USA.,Institute of Collective Health Studies, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil
| | - Jusun Hwang
- Wildlife Conservation Society, New York, USA
| | - Sung-Il Cho
- Institute of Health and Environment, Graduate School of Public Health, Seoul National University, Seoul, South Korea. .,Department of Public Health Science, Graduate School of Public Health, Seoul National University, Seoul, South Korea.
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48
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Tchouassi DP, Torto B, Sang R, Riginos C, Ezenwa VO. Large herbivore loss has complex effects on mosquito ecology and vector-borne disease risk. Transbound Emerg Dis 2020; 68:2503-2513. [PMID: 33170555 DOI: 10.1111/tbed.13918] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Revised: 09/25/2020] [Accepted: 11/06/2020] [Indexed: 12/15/2022]
Abstract
Loss of biodiversity can affect transmission of infectious diseases in at least two ways: by altering host and vector abundance or by influencing host and vector behaviour. We used a large herbivore exclusion experiment to investigate the effects of wildlife loss on the abundance and feeding behaviour of mosquito vectors and to explore consequences for vector-borne disease transmission. Large herbivore loss affected both mosquito abundance and blood-feeding behaviour. For Aedes mcintoshi, the dominant mosquito species in our study and a primary vector of Rift Valley fever virus (RVFV), abundance decreased with large herbivore loss, while blood feeding on humans increased. Despite an elevated human biting rate in the absence of large herbivores, we estimated that the potential for RVFV transmission to humans doubles in the presence of large herbivores. These results demonstrate that multiple effects of biodiversity loss on vectors can lead to counterintuitive outcomes for human disease risk.
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Affiliation(s)
- David P Tchouassi
- International Centre of Insect Physiology and Ecology, Nairobi, Kenya
| | - Baldwyn Torto
- International Centre of Insect Physiology and Ecology, Nairobi, Kenya
| | - Rosemary Sang
- International Centre of Insect Physiology and Ecology, Nairobi, Kenya
| | | | - Vanessa O Ezenwa
- Odum School of Ecology and Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, USA
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49
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Ordóñez-Krasnowski PC, Lanati LA, Gaspe MS, Cardinal MV, Ceballos LA, Gürtler RE. Domestic host availability modifies human-triatomine contact and host shifts of the Chagas disease vector Triatoma infestans in the humid Argentine Chaco. MEDICAL AND VETERINARY ENTOMOLOGY 2020; 34:459-469. [PMID: 32700806 DOI: 10.1111/mve.12463] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2020] [Revised: 06/18/2020] [Accepted: 07/01/2020] [Indexed: 06/11/2023]
Abstract
Domestic animals may affect human-vector contact and parasite transmission rates. We investigated the relationships between host-feeding choices, site-specific host availability, bug nutritional status, stage and abundance of Triatoma infestans Klug (Heteroptera: Reduviidae) in rural houses of Pampa del Indio during spring. We identified the bloodmeal sources of 865 triatomines collected in 70 sites from four main ecotopes. The main sources in domiciles were human (65.9%), chicken (23.4%) and dog (22.4%); dog (64.4%, 35.3%) and chicken (33.1%, 75.4%) in kitchens and storerooms, respectively; and chicken (94.7%) in chicken coops. Using random-intercept logistic regression clustered by domicile, the fraction of human-fed triatomines strongly decreased with increasing proportions of chicken- and dog-fed bugs, dropping from 96.4% when no chicken or dog slept indoors at night to 59.4% when both did. The fraction of dog-fed bugs significantly decreased with increasing human and chicken blood indices, and marginally increased with an indoor-resting dog. Mixed blood meals occurred 3.62 times more often when a chicken or a dog slept indoors. Host blood source did not affect mean body weight adjusted for body length and bug stage. Indoor-resting chickens and dogs greatly modified human-bug contact rates, and may be targeted with long-lasting systemic insecticides to suppress infestation.
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Affiliation(s)
- P C Ordóñez-Krasnowski
- Laboratorio de Eco-Epidemiología, Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Ciudad Universitaria, Buenos Aires, Argentina
| | - L A Lanati
- Instituto Nacional de Diagnóstico e Investigación en la Enfermedad de Chagas Dr Mario Fatala Chaben, Buenos Aires, Argentina
| | - M S Gaspe
- Laboratorio de Eco-Epidemiología, Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Ciudad Universitaria, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires. Instituto de Ecología, Genética y Evolución de Buenos Aires (IEGEBA), Ciudad Universitaria, Buenos Aires, Argentina
| | - M V Cardinal
- Laboratorio de Eco-Epidemiología, Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Ciudad Universitaria, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires. Instituto de Ecología, Genética y Evolución de Buenos Aires (IEGEBA), Ciudad Universitaria, Buenos Aires, Argentina
| | - L A Ceballos
- Laboratorio de Eco-Epidemiología, Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Ciudad Universitaria, Buenos Aires, Argentina
- Experimental Zooprophylactic Institute of Piedmont, Liguria and Aosta Valley, Turin, Italy
| | - R E Gürtler
- Laboratorio de Eco-Epidemiología, Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Ciudad Universitaria, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires. Instituto de Ecología, Genética y Evolución de Buenos Aires (IEGEBA), Ciudad Universitaria, Buenos Aires, Argentina
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50
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Zhang F, Chase-Topping M, Guo CG, van Bunnik BAD, Brierley L, Woolhouse MEJ. Global discovery of human-infective RNA viruses: A modelling analysis. PLoS Pathog 2020; 16:e1009079. [PMID: 33253277 PMCID: PMC7728385 DOI: 10.1371/journal.ppat.1009079] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Revised: 12/10/2020] [Accepted: 10/19/2020] [Indexed: 12/28/2022] Open
Abstract
RNA viruses are a leading cause of human infectious diseases and the prediction of where new RNA viruses are likely to be discovered is a significant public health concern. Here, we geocoded the first peer-reviewed reports of 223 human RNA viruses. Using a boosted regression tree model, we matched these virus data with 33 explanatory factors related to natural virus distribution and research effort to predict the probability of virus discovery across the globe in 2010–2019. Stratified analyses by virus transmissibility and transmission mode were also performed. The historical discovery of human RNA viruses has been concentrated in eastern North America, Europe, central Africa, eastern Australia, and north-eastern South America. The virus discovery can be predicted by a combination of socio-economic, land use, climate, and biodiversity variables. Remarkably, vector-borne viruses and strictly zoonotic viruses are more associated with climate and biodiversity whereas non-vector-borne viruses and human transmissible viruses are more associated with GDP and urbanization. The areas with the highest predicted probability for 2010–2019 include three new regions including East and Southeast Asia, India, and Central America, which likely reflect both increasing surveillance and diversity of their virome. Our findings can inform priority regions for investment in surveillance systems for new human RNA viruses. There is a lack of evidence on the factors driving the discovery of RNA viruses in general globally. Here, we recorded the initial discovery sites of all 223 human RNA viruses and revealed its global distribution pattern. By using a machine learning method, we found that the virus discovery was driven by a combination of variables describing socio-economic level, land use, climate and biodiversity, with GDP and GDP growth found to be the two leading predictors. We also predicted the probability of virus discovery in 2010–2019 across the globe, and identified three new areas (East and Southeast Asia, India, and Central America) in addition to the historical high-risk areas. The further stratified analyses (distinguishing viruses transmissible in humans or strictly zoonotic, and vector-borne or non-vector-borne) helped pinpoint the explanatory factors for the discovery of specific categories of viruses and confirm the plausibility of the model. The results of our study further understanding of the spatial distribution of human RNA virus discovery, and map the likelihood of further discoveries across the world. By identifying where new viruses are most likely to be discovered in the near future the study helps identify priority areas for surveillance.
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Affiliation(s)
- Feifei Zhang
- Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
- * E-mail:
| | - Margo Chase-Topping
- Centre for Immunity, Infection and Evolution, School of Biological Sciences, University of Edinburgh, United Kingdom
- Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, United Kingdom
| | - Chuan-Guo Guo
- Department of Medicine, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, China
| | - Bram A. D. van Bunnik
- Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
- Centre for Immunity, Infection and Evolution, School of Biological Sciences, University of Edinburgh, United Kingdom
| | - Liam Brierley
- Department of Biostatistics, Institute of Translational Medicine, University of Liverpool, Liverpool, United Kingdom
| | - Mark E. J. Woolhouse
- Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
- Centre for Immunity, Infection and Evolution, School of Biological Sciences, University of Edinburgh, United Kingdom
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