Evaluation of anthropogenic impacts on marine turtle populations in Lençóis Maranhenses National Park

Currently, one of the most significant threats to marine turtle populations is incidental capture, which can occur on a large scale due to industrial, coastal, or artisanal fishing practices, such as gillnets, fish corrals, longlines, and trawl nets. Other threats exacerbate the situation for these animals, including environmental degradation, global warming, and noise pollution associated with navigation, oil and gas exploration and production, naval sonars, military operations, fishing, and marine seismic research. Our objective was to evaluate and identify anthropogenic impacts on marine turtle populations in the Lençóis Maranhenses National Park. Between 2015 and 2019, systematic monitoring recorded 173 marine turtle strandings, including 164 dead and nine live individuals of E. imbricata, predominantly of C. mydas (46.2 %, n = 80), L. olivacea (38.2 %, n = 66), E. imbricata (5.2 %, n = 9), C. caretta (0.6 %, n = 1), and 9.8 % (n = 17) unidentified. Among the 44 individuals with determined causes of death, 79.5 % (n = 35) were linked to anthropogenic actions, 9 % (n = 4) to natural causes, and 11.3 % (n = 5) to mixed anthropogenic/natural factors. The remaining 129 cases were classified as indeterminate. A significant increase in strandings was observed during the 3D seismic survey period (mean = 34.4 strandings/bimester) compared to periods without seismic activity (mean = 4.8 strandings/bimester). These results underscore that cumulative threats, particularly human-driven pressures, severely impact marine turtle populations. An enhanced understanding of these dynamics is critical for developing targeted conservation strategies at Lençóis Maranhenses National Park. The findings provide actionable insights to mitigate anthropogenic impacts and inform regional management plans.

A best practice framework for assessing plastic ingestion in marine turtles

The ingestion of plastic debris has been reported in all seven marine turtle species, affecting vital processes throughout their entire life cycle and key habitats. Consequently, this emerging threat has been recognized as a priority conservation concern. The potential health impacts range from cryptic sublethal effects to severe injury and death. A comprehensive understanding of these impacts and the processes involved, at both the individual and population levels, is crucial for evaluating the vulnerability of marine turtles to plastic pollution. Aiming to guide researchers and stakeholders from the initial stages of project development, this study discusses essential components for establishing and achieving research on plastic ingestion in marine turtles. Drawing on diverse efforts globally, this manuscript compiles the most common approaches and established methodologies, while evaluating resource availability and capabilities, to outline a globally applicable best practice framework for designing and implementing research and monitoring initiatives on plastic ingestion impacts to marine turtles.

Blood and cloacal microbiome profile of captive green turtles (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata): Water quality and conservation implications

In this study, we studied the environment factors such as plastics and heavy metals affecting the blood and cloacal microbiome of green (Chelonia mydas) and hawksbill (Eretmochelys imbricata) in captivity. By non-metric multidimensional scaling analysis, data has shown that the environment factors (p = 0.02), rather than species differences (p = 0.06), significantly influenced the composition of the cloacal microbiota of green and hawksbill turtles. The cloacal microbiota of both captive green and hawksbill turtles was dominated by several similar dominant phyla at differential abundance. Green turtles' cloacal microbiome was made up of 46% of Proteobacteria, 31% of Bacteroidota, 11% of Campylobacterota and 4% of Firmicutes, while the hawksbill turtles' cloacal microbiome was made up of 33% of Bacteroidota, 18% of Firmicutes, 17% of Proteobacteria, and 2% of Campylobacterota. Water conductivity, salinity, microplastic polymers (polycarbonate, polyethylene terephthalate, polystyrene), and copper are positively associated (p < 0.05) with blood urea nitrogen. Hematocrit and hemoglobin were found also negatively correlated (p < 0.05) with water pH, polyethylene terephthalate, iron, lead and zinc. The correlations established in this study shed light on the intricate interplay between water quality and the physiological responses of sea turtles. Recognizing these relationships is pivotal for monitoring and preserving the well-being of sea turtles in their natural habitats.

Comparing acoustic and satellite telemetry: an analysis quantifying the space use of Chelonia mydas in Bimini, Bahamas

Passive acoustic and Argos satellite telemetry are common methods for tracking marine species and are often used similarly to quantify space use. However, data-driven comparisons of these methods and their associated ecological inferences are limited. To address this, we compared temporal durations, spatial resolutions, financial costs and estimates of occurrence and range distributions for each tracking approach using nine juvenile green turtles (Chelonia mydas) in Bimini, Bahamas. Tracking durations were similar, although acoustic tracking provided higher spatiotemporal resolution than satellite tracking. Occurrence distributions (95%) estimated from satellite telemetry were 12 times larger than those from acoustic telemetry, while satellite range distributions (95%) were 89 times larger. While individuals generally remained within the extent of the acoustic receiver array, gaps in coverage were identified. These gaps, combined with the lower accuracy of satellite telemetry, were likely drivers for the larger satellite distributions. Costs differed between telemetry methods, with acoustic telemetry being less expensive at larger sample sizes with a previously established array. Our results suggest that acoustic and satellite telemetry may not provide similar inferences of individual space use. As such, we provide recommendations to identify telemetry methods appropriate for specific study objectives and provide discussion on the biases of each.

Photo-identification shows the spatio-temporal distribution of two sea turtle species in a Brazilian developmental foraging ground

Sea turtles spend most of their life cycle in foraging grounds. Research in developmental habitats is crucial to understanding individual dynamics and to support conservation strategies. One approach to gather information in foraging grounds is the use of cost-effective and non-invasive techniques that allow public participation. The present study aimed to use photographic-identification (photo-ID) to investigate the spatio-temporal distribution of Chelonia mydas and Eretmochelys imbricata. Furthermore, we describe fibropapillomatosis occurrence. This work was carried out at subtropical rocky reefs of the Brazilian coast in Arraial do Cabo (22°57'S, 42°01'W), within a sustainable conservation unit. A total of 641 images were obtained through social media screening (n = 447), citizen science (n = 168), or intentional capture (n = 26) dated between 2006 and 2021. Additionally, 19 diving forms (between 2019 and 2021) were received from citizen scientists. All diving forms presented at least one turtle. Photo-ID identified 174 individuals of C. mydas, with 45 being resighted, while E. imbricata had 32 individuals, with 7 individuals resighted. The median interval between the first and last individual sighting was 1.7 years for C. mydas and 2.4 years for E. imbricata. Fibropapillomatosis was only observed in C. mydas, with a prevalence of 13.99% (20 of 143 individuals) and regression in 2 individuals (10.00%). Our results indicated that Arraial do Cabo is an important development area with individuals residing for at least 6 years. This study demonstrated that social media, along with photo-ID, can be useful to provide sea turtle estimates in a foraging ground using a non-invasive, low-cost method.

Supplementary Information

The online version contains supplementary material available at 10.1007/s00227-023-04226-z.

Natal Origin and Spatiotemporal Distribution of Leatherback Turtle (Dermochelys coriacea) Strandings at a Foraging Hotspot in Temperate Waters of the Southwest Atlantic Ocean

Leatherback turtles migrate long distances between nesting beaches and distant foraging areas worldwide. This study analyzes the genetic diversity, life history stage, spatiotemporal distribution, and associated threats of a foraging aggregation in the Southwest Atlantic Ocean. A total of 242 leatherbacks stranded or bycaught by artisanal fisheries were recorded from 1997 to 2021 in Uruguay, with sizes ranging from 110.0 to 170.0 cm carapace lengths, indicating that the aggregation is composed of large juveniles and adults. Results of Bayesian mixed-stock analysis show that leatherbacks come primarily from the West African rookeries, based on mitochondrial DNA sequences obtained from 59 of the turtles representing seven haplotypes, including a novel one (Dc1.7). The main threat identified in the area is the fisheries bycatch but most of the carcasses observed were badly decomposed. There was significant seasonal and interannual variability in strandings that is likely associated with the availability of prey and the intensity of the fishing effort. Taken together, these findings reinforce the importance of these South American foraging areas for leatherbacks and the need to determine regional habitat use and migratory routes across the broader Atlantic region, in order to develop effective conservation measures to mitigate threats both at nesting beaches and foraging areas.

Size-Mediated Sea Turtle Behavioral Responses at Artificial Habitats in the Northern Gulf of Mexico

Our understanding of size-specific sea turtle behavior has lagged due to methodological limitations. However, stereo-video cameras (SVC) are an in-water approach that can link body-size and allow for relatively undisturbed behavioral observations. In this study, we conducted SVC dive surveys at local artificial reefs, piers, and jetties in the northern Gulf of Mexico (nGOM) from May 2019 to August 2021. Using SVCs, we measured sea turtle straight carapace length, documented behaviors, and quantified wariness by assessing minimum approach distance (MAD). In green sea turtles (Chelonia mydas), the observed MAD ranged from 0.72 to 5.99 m (mean 2.10 m ± 1.10 standard deviation (SD), n = 73). For loggerhead sea turtles (Caretta caretta), the MAD ranged between 0.93 and 3.80 m (mean 2.12 m ± 0.99 SD, n = 16). Kemp's ridley sea turtles (Lepidochelys kempii) were similar to loggerheads, and MAD ranged from 0.78 to 3.63 m (mean 2.35 m ± 0.99 SD, n = 8). We then evaluated what biological factors could impact the MAD observed by species, but we excluded Kemp's ridleys as the sample size was small. Using a linear mixed model and model selection based on AICc, the top ranked model for both green and loggerhead sea turtles included SCL as the most important factor influencing MAD. MAD did not vary with habitat type for either species. Our results showed that larger individuals, regardless of species, have a greater wariness response, becoming startled at greater distances than smaller individuals. The findings of our study support the use of SVC as an accessible, non-invasive tool to conduct ecologically relevant in-water surveys of sea turtles to link behavioral observations to body size.

Design and fabrication of a stereo-video camera equipped unoccupied aerial vehicle for measuring sea turtles, sharks, and other marine fauna

The recent commercialization of unoccupied aerial vehicles (UAVs) has facilitated their incorporation into a variety of ecological studies. While UAVs are able to provide accurate visual data of marine species from an aerial perspective, these devices have some limitations that make measuring marine animals below the surface challenging. Many marine organisms are often visible from the air, but are deeper in the water column, and current methods cannot measure animals below the surface. Here, we developed and tested a stereo-video camera (SVC) system that was mounted onto a commercially-available UAV. We used the SVC-UAV to conduct remote body-size measurements for two marine species: the green sea turtle (Chelonia mydas) and the nurse shark (Ginglymostoma cirratum). When comparing SVC measurements to those taken by hand, the SVC-UAV had a mean absolute error (MAE) of 4.44 cm (n = 6; mean percent error (MPE) = 10.6%) for green sea turtles and 7.16 cm absolute error (n = 1; PE = 3.6%) for the nurse shark. Using a linear model, we estimated the slope of the SVC versus hand measurements for green sea turtles to be 1.085 (±0.099 SE), and accounting for the standard error, a measurement bias was not apparent. Using model selection, based on a global model predicting MAE from animal distance to the SVC and body size, the top ranked model was the intercept-only model. This indicates that neither animal distance nor body size strongly influenced measurement error. Incorporating SVC systems into UAVs can allow for relatively accurate measurements of near surface-dwelling marine species. To our knowledge, there is no other stand-alone SVC for UAVs available that offers similar accuracy and utility.

Global challenges and priorities for interventions addressing illegal harvest, use and trade of marine turtles

Worldwide, conservation initiatives have attempted to curb illegal harvest, use and trade of marine turtles at least since the 1950s. Despite some declines in local trade and consumption, these illegal activities are still often reported as a key threat to marine turtle populations. Reassessing and refining global conservation priorities for marine turtles allows us to formulate evidence-based strategies and effective interventions to address this threat. We surveyed a total of 103 marine turtle conservation researchers and practitioners globally to understand how conservation efforts can be better allocated to curb illegal harvest, use and trade. We explored the characteristics of these illegal activities, conservation priorities, challenges and lessons learnt. According to participants’ perceptions, progress has been achieved, but illegal harvest, use and trade remain pressing threats globally. Current challenges to addressing illegal activities relate to fisheries management, enforcement and legislation. Recommended priority actions include law and penalty enforcement, enhancing environmental literacy, awareness and stakeholder participation, and improving local conservation leadership and onshore/maritime management based on research. Based on participants' perceptions, we identify priorities for marine turtle conservation interventions that aim to curb illegal harvest, use and trade. Given the challenges of obtaining reliable information on sensitive topics such as illegal harvest, use and trade, further work should seek to validate our findings through empirical research. Further work could also seek to comprehend better how expert elicitation in conservation is influenced by individual experience, perspectives and goals.

Fishers' Ecological Knowledge and Stable Isotope Analysis Reveal Mangrove Estuaries as Key Developmental Habitats for Critically Endangered Sea Turtles

Successful conservation of endangered, migratory species requires an understanding of habitat use throughout life stages. When dedicated scientific studies are difficult to conduct, local expert knowledge can provide crucial baseline data to guide study design and aid data interpretation. In 2008, fishers in El Salvador demonstrated that eastern Pacific hawksbill sea turtles (Eretmochelys imbricata)—a population conservation biologists considered virtually extirpated—use mangrove estuaries as nesting habitat rather than open-coast beaches used by hawksbills in other regions. We confirmed and amplified this observation by using fishers' ecological knowledge to guide biological sampling for stable isotope analysis to assess if eastern Pacific hawskbills use mangrove-dominated estuaries as developmental habitats. We found that immature hawksbills experience a pelagic stage and then recruit to estuaries at ~37 cm curved carapace length, where they increase reliance on estuarine resources until they approach adult sizes. This life history strategy makes them especially vulnerable to in-water nearshore threats, and necessitates targeted expansion of conservation efforts throughout the eastern Pacific. Our analysis also provides a model for integrating traditional scientific approaches with local knowledge—a model that could yield crucial advances in other understudied regions.

Multiple haplotypes of Chelonia mydas juveniles in a threatened hotspot area in Southern Brazil

Mixed stocks are described for Chelonia mydas and the frequency of haplotypes in feeding areas can aid understanding of the genetic and ecological diversity, since with this information it is possible to identify the origin of the individuals. The current study aims to characterize and compare genetic diversity along the coast of Paraná with 17 other feeding areas in the Atlantic Ocean. A total of 285 samples from juveniles were DNA sequenced in the control region, resulting in the identification of 12 haplotypes, with a predominance of the CMA8 haplotype (69%) and the first registration of CMA23. For the study subjects, haplotypic and nucleotide diversity were 0.469 ± 0.032 and 0.00189 ± 0.00020, respectively, and comparisons with other feeding areas presented significant values for the majority of FST and ΦST. The results point to the importance of this region and provide evidence that over the years a mixed stock has used the region as a feeding area. This variation could be related to sea currents, climatic changes, and oceanographic characteristics that may alter the availability of food, water temperature, and the presence of turtles. The current results can be considered in conservation plans for Chelonia mydas.

Selectivity of marine-debris ingestion by juvenile green turtles (Chelonia mydas) at a South American World Heritage Listed area

Beaches in southern Brazil have substantial marine debris and strandings of dead juvenile green turtles (Chelonia mydas). This study investigates associations by quantifying marine debris (1) ingested among new (<40 cm curved carapace length; CCL) and older (≥40 cm CCL) juvenile C. mydas recruits; (2) concentrations on beach transects; and then (3) selective ingestion by C. mydas. Among 40 C. mydas (2014-2015), 93% had ingested debris, with smaller individuals having proportionally more. Sheet-like and hard plastics were the most frequently ingested, and commonly concentrated on beach transects. Estuarine beach transects had more debris than those facing the ocean. Selectivity analyses revealed all C. mydas avoided white miscellaneous debris and straws, while smaller conspecifics selected clear sheet-like plastics and avoided coloured ones. The results reiterate a need for long-term reforms to regional waste disposal and short-term initiatives encouraging social awareness to avoid key plastics and reduce ingestion by C. mydas.

First Atlantic satellite tracks of 'lost years' green turtles support the importance of the Sargasso Sea as a sea turtle nursery

In-water behaviour and long-term movements of oceanic-stage juvenile sea turtles are not well described or quantified. This is owing to technological or logistical limitations of tracking small, fast-growing animals across long distances and time periods within marine habitats. Here, we present, to our knowledge, the first long-term offshore tracks of oceanic green turtles (Chelonia mydas) in western North Atlantic waters. Using a tag attachment technique developed specifically for young (less than 1 year old) green turtles, we satellite-tracked 21 oceanic-stage green turtles (less than 19 cm straight carapace length) up to 152 days using small, solar-powered transmitters. We verify that oceanic-stage green turtles: (i) travel to and remain within oceanic waters; (ii) often depart the Gulf Stream and North Atlantic Subtropical Gyre currents, orienting towards waters associated with the Sargasso Sea; (iii) remain at the sea surface, using thermally beneficial habitats that promote growth and survival of young turtles; and (iv) green turtles orient differently compared to same stage loggerhead turtles (Caretta caretta). Combined with satellite tracks of oceanic-stage loggerhead turtles, our work identifies the Sargasso Sea as an important nursery habitat for North Atlantic sea turtles, supporting a growing body of research that suggests oceanic-stage sea turtles are behaviourally more complex than previously assumed.

Quantifying local ecological knowledge to model historical abundance of long-lived, heavily-exploited fauna

Deriving robust historical population trends for long-lived species subject to human exploitation is challenging in scenarios where long-term scientific data are scarce or unavailable, as often occurs for species affected by small-scale fisheries and subsistence hunting. The importance of Local Ecological Knowledge (LEK) in data-poor scenarios is increasingly recognized in conservation, both in terms of uncovering historical trends and for engaging community stewardship of historic information. Building on previous work in marine historical ecology and local ecological knowledge, we propose a mixed socio-ecological framework to reliably document and quantify LEK to reconstruct historical population trends. Our method can be adapted by interdisciplinary teams to study various long-lived taxa with a history of human use. We demonstrate the validity of our approach by reconstructing long-term abundance data for the heavily-exploited East Pacific green turtle (Chelonia mydas) in Baja California, Mexico, which was driven to near extinction by a largely unregulated fishery from the early 1950s to the 1980s. No scientific baseline abundance data were available for this time-frame because recent biological surveys started in 1995 after all green turtle fisheries in the area were closed. To fill this data gap, we documented LEK among local fishers using ethnographic methods and obtained verified, qualitative data to understand the socio-environmental complexity of the green turtle fishery. We then established an iterative framework to synthesize and quantify LEK using generalized linear models (GLMs) and nonlinear regression (NLR) to generate a standardized, LEK-derived catch-per-unit-effort (CPUE) time-series. CPUE is an index of abundance that is compatible with contemporary scientific survey data. We confirmed the accuracy of LEK-derived CPUE estimates via comparisons with fisheries statistics available for 1962–1982. We then modeled LEK-derived abundance trends prior to 1995 using NLR. Our model established baseline abundance and described historical declines, revealing that the most critical (exponential) decline occurred between 1960 and 1980. This robust integration of LEK data with ecological science is of critical value for conservation and management, as it contributes to a holistic view of a species’ historic and contemporary conservation status.

Conservation and Enforcement Capacity index (CECi): Integrating human development, economy, and marine turtle status

Human societies are closely linked to their ecological environments. Natural ecosystems and wildlife populations are often in better condition in countries with healthy, educated and economically prosperous populations compared to countries with lower health and literacy conditions, and depressed economies. In the latter countries, these socio-economic factors can compromise government's capacity to manage their natural resources. Thus, the conservation capacity of a government is likely to play key role in the protection of threatened species, such as marine turtles. This paper aims: (1) to evaluate the conservation capacity and enforcement within the 58 Regional Management Units (RMUs) of the seven species of marine turtles throughout the world, and (2) to develop a proxy that predicts the conservation status of RMUs. We developed a Conservation and Enforcement Capacity index (CECi) by integrating the following indices: (a) the economic level and, (b) the Human Development Index (HDI) of each country, plus (c) the risks and threats in the RMUs. We used the conservation status of 15 RMUs recently assessed by the International Union for Conservation of Nature - IUCN to predict the conservation status of the 43 RMUs without updated IUCN categorisation. CECi values ranged from 0 to 1, where lower values represent a better capacity for implementation of conservation initiatives. We found that using our multi-index model, we predicted the status of 33 of 58 RMUs, 57% of which may be of threatened conservation status due to their high CECi values. This study highlighted how socio-economic aspects may impact conservation of endangered species.

Multiple-threats analysis for loggerhead sea turtles in the southwest Atlantic Ocean

Priority-setting approaches for widely distributed and long-lived species can be challenging. This is especially true for sea turtles, which are species of conservation concern. The aim of this study was to conduct a detailed analysis of threats to identify, quantify and prioritize the main impacts to the loggerhead Caretta caretta population in the southwest Atlantic (SWA) region. A matrix of relative threats was constructed. Threats were identified and classified for 8 different life stages (nesting females, eggs, hatchlings, swim-frenzy transitional stage, juveniles-neritic, juveniles-oceanic, adults-neritic, adults-oceanic) and for 3 ecosystems inhabited by sea turtles (terrestrial, neritic and oceanic). Results indicated that fisheries bycatch represents a major threat for loggerheads in the SWA. The trawl fishery was identified as the main source of mortality for neritic juvenile and adult turtles, whereas juveniles in oceanic areas are mostly impacted by surface longlines. In terrestrial environments, eggs and hatchlings are mainly affected by habitat alteration and by native and exotic predators. Loggerheads have shown a positive nesting trend at their main nesting beaches in the SWA, probably due to long-term conservation efforts to reduce mortality of the different life stages within the terrestrial zone. However, the high mortality rates of juveniles and sub-adults documented at some known foraging grounds represent a reason for concern, as this may affect the overall population trend in the future. This threat analysis provides a tool to review the goals of national action plans, prioritize actions and optimize the allocation of management resources.

Tracking foraging green turtles in the Republic of the Congo: insights into spatial ecology from a data poor region

Globally, marine turtles are considered threatened throughout their range, and therefore conservation practitioners are increasingly investing resources in marine protected areas to protect key life history stages and critical habitats, including foraging grounds, nesting beaches and inter-nesting areas. Empirical data on the distribution of these habitats and/or the spatial ecology and behaviour of individuals of many marine turtle populations are often lacking, undermining conservation efforts, particularly along the Atlantic coast of Africa. Here we contribute to the knowledge base in this region by describing patterns of habitat use for nine green turtles Chelonia mydas tagged with satellite platform transmitter terminals at a foraging ground in Loango Bay, Republic of the Congo, one of only a few documented mainland foraging grounds for marine turtles in Central Africa. Analyses of these data revealed that core areas of habitat use and occupancy for a wide range of size/age classes were restricted to shallow waters adjacent to Pointe Indienne in Loango Bay, with most individuals showing periods of high fidelity to this area. These data are timely given the Congolese government recently announced its intention to create a marine conservation zone to protect marine turtles in Loango Bay. Despite the small sample size of this study, these data exemplify the need for comprehensive strategies that span national jurisdictions, as we provide the first documented evidence of linkages between green turtle foraging sites in Central Africa (Loango Bay, Republic of the Congo) and Southern Africa (Mussulo Bay, Angola).