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For: Pinnell LJ, Reyes AA, Wolfe CA, Weinroth MD, Metcalf JL, Delmore RJ, Belk KE, Morley PS, Engle TE. Bacteroidetes and Firmicutes Drive Differing Microbial Diversity and Community Composition Among Micro-Environments in the Bovine Rumen. Front Vet Sci 2022;9:897996. [PMID: 35664853 PMCID: PMC9161295 DOI: 10.3389/fvets.2022.897996] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 04/28/2022] [Indexed: 01/04/2023]  Open
Number Cited by Other Article(s)
1
da Silva Pereira M, Alcantara LM, de Freitas LM, de Oliveira Ferreira AL, Leal PL. Microbial Rumen proteome analysis suggests Firmicutes and Bacteroidetes as key producers of lignocellulolytic enzymes and carbohydrate-binding modules. Braz J Microbiol 2025;56:817-833. [PMID: 39932663 PMCID: PMC12095108 DOI: 10.1007/s42770-025-01627-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2024] [Accepted: 01/21/2025] [Indexed: 02/12/2025]  Open
2
Zhu Y, Wang J, Zhang X, Cidan Y, Wang H, Pubu P, Ali M, Li K, Basang W. Traditional Chinese herbal formulas modulate inflammatory mediators, antioxidant enzyme levels, and ruminal microbiota composition in postpartum female Yaks. Sci Rep 2025;15:18610. [PMID: 40437008 PMCID: PMC12119836 DOI: 10.1038/s41598-025-91301-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2024] [Accepted: 02/19/2025] [Indexed: 06/01/2025]  Open
3
Li M, Wang Z, Ma Z, Wang Y, Jia H, Zhang L, Chen P, Mao Y, Yang Z. Metagenomic analysis reveals microbial drivers of heat resistance in dairy cattle. Anim Microbiome 2025;7:35. [PMID: 40205588 PMCID: PMC11984055 DOI: 10.1186/s42523-025-00399-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2024] [Accepted: 03/19/2025] [Indexed: 04/11/2025]  Open
4
Shen H, Wang M, Ning Y, Zhao Y, Danzeng B, Li K, Shi H, Li W. Effect of Dietary Addition of Lentinus edodes on Rumen Flora, Lactation, and Health of Dairy Goats. Animals (Basel) 2025;15:676. [PMID: 40075961 PMCID: PMC11899011 DOI: 10.3390/ani15050676] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Revised: 02/24/2025] [Accepted: 02/24/2025] [Indexed: 03/14/2025]  Open
5
Zhou Z, Yong K, Luo Z, Du Z, Zhou T, Li X, Yao X, Shen L, Yu S, Huang Y, Cao S. The Positive Regulatory Effect of DBT on Lipid Metabolism in Postpartum Dairy Cows. Metabolites 2025;15:58. [PMID: 39852401 PMCID: PMC11767874 DOI: 10.3390/metabo15010058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2024] [Revised: 01/08/2025] [Accepted: 01/13/2025] [Indexed: 01/26/2025]  Open
6
Wang Z, Wu W, Lv X, Xing W, Wang X, Tuo Y, Ma Y, He L, Zhang Z, Zheng W. Effect of differences in residual feed intake on gastrointestinal microbiota of Dexin fine-wool meat sheep. Front Microbiol 2024;15:1482017. [PMID: 39760076 PMCID: PMC11697150 DOI: 10.3389/fmicb.2024.1482017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2024] [Accepted: 12/06/2024] [Indexed: 01/07/2025]  Open
7
Wang S, Tang W, Jiang T, Wang R, Zhang R, Ou J, Wang Q, Cheng X, Ren C, Chen J, Huang Y, Zhang Z. Effect of Dietary Concentrate-to-Forage Ratios During the Cold Season on Slaughter Performance, Meat Quality, Rumen Fermentation and Gut Microbiota of Tibetan Sheep. Animals (Basel) 2024;14:3305. [PMID: 39595356 PMCID: PMC11591461 DOI: 10.3390/ani14223305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2024] [Revised: 11/13/2024] [Accepted: 11/14/2024] [Indexed: 11/28/2024]  Open
8
Lu ML, Yuan GH, Rehemujiang H, Li CC, Hu LH, Duan PP, Zhang LD, Diao QY, Deng KD, Xu GS. Effects of spent substrate of oyster mushroom (Pleurotus ostreatus) on ruminal fermentation, microbial community and growth performance in Hu sheep. Front Microbiol 2024;15:1425218. [PMID: 39507332 PMCID: PMC11538048 DOI: 10.3389/fmicb.2024.1425218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 10/11/2024] [Indexed: 11/08/2024]  Open
9
He H, Fang C, Liu L, Li M, Liu W. Environmental Driving of Adaptation Mechanism on Rumen Microorganisms of Sheep Based on Metagenomics and Metabolomics Data Analysis. Int J Mol Sci 2024;25:10957. [PMID: 39456741 PMCID: PMC11508146 DOI: 10.3390/ijms252010957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2024] [Revised: 10/04/2024] [Accepted: 10/05/2024] [Indexed: 10/28/2024]  Open
10
Zhao X, Zhang Y, Rahman A, Chen M, Li N, Wu T, Qi Y, Zheng N, Zhao S, Wang J. Rumen microbiota succession throughout the perinatal period and its association with postpartum production traits in dairy cows: A review. ANIMAL NUTRITION (ZHONGGUO XU MU SHOU YI XUE HUI) 2024;18:17-26. [PMID: 39022774 PMCID: PMC11253274 DOI: 10.1016/j.aninu.2024.04.013] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/07/2023] [Revised: 02/18/2024] [Accepted: 04/24/2024] [Indexed: 07/20/2024]
11
Duan P, Rehemujiang H, Zhang L, Lu M, Li C, Hu L, Wang Y, Diao Q, Xu G. Lycium barbarum (Wolfberry) Branches and Leaves Enhance the Growth Performance and Improve the Rumen Microbiota in Hu Sheep. Animals (Basel) 2024;14:1610. [PMID: 38891656 PMCID: PMC11171408 DOI: 10.3390/ani14111610] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Revised: 05/24/2024] [Accepted: 05/24/2024] [Indexed: 06/21/2024]  Open
12
Kang R, Lee H, Seon H, Park C, Song J, Park JK, Kim YK, Kim M, Park T. Effects of diets for three growing stages by rumen inocula donors on in vitro rumen fermentation and microbiome. JOURNAL OF ANIMAL SCIENCE AND TECHNOLOGY 2024;66:523-542. [PMID: 38975572 PMCID: PMC11222118 DOI: 10.5187/jast.2023.e109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 09/25/2023] [Accepted: 10/10/2023] [Indexed: 07/09/2024]
13
Wu Y, Gao N, Sun C, Feng T, Liu Q, Chen WH. A compendium of ruminant gastrointestinal phage genomes revealed a higher proportion of lytic phages than in any other environments. MICROBIOME 2024;12:69. [PMID: 38576042 PMCID: PMC10993611 DOI: 10.1186/s40168-024-01784-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Accepted: 02/29/2024] [Indexed: 04/06/2024]
14
Law SR, Mathes F, Paten AM, Alexandre PA, Regmi R, Reid C, Safarchi A, Shaktivesh S, Wang Y, Wilson A, Rice SA, Gupta VVSR. Life at the borderlands: microbiomes of interfaces critical to One Health. FEMS Microbiol Rev 2024;48:fuae008. [PMID: 38425054 PMCID: PMC10977922 DOI: 10.1093/femsre/fuae008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 02/12/2024] [Accepted: 02/27/2024] [Indexed: 03/02/2024]  Open
15
Dhakal R, Neves ALA, Sapkota R, Khanal P, Ellegaard-Jensen L, Winding A, Hansen HH. Temporal dynamics of volatile fatty acids profile, methane production, and prokaryotic community in an in vitro rumen fermentation system fed with maize silage. Front Microbiol 2024;15:1271599. [PMID: 38444805 PMCID: PMC10912478 DOI: 10.3389/fmicb.2024.1271599] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Accepted: 02/01/2024] [Indexed: 03/07/2024]  Open
16
Aschalew ND, Zhang L, Wang Z, Xia Y, Yin G, Dong J, Zhen Y, Zhang X, Wang T, Sun Z, Qin G. Effects of yeast culture and oxalic acid supplementation on in vitro nutrient disappearance, rumen fermentation, and bacterial community composition. Front Vet Sci 2024;10:1330841. [PMID: 38313769 PMCID: PMC10834634 DOI: 10.3389/fvets.2023.1330841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Accepted: 12/14/2023] [Indexed: 02/06/2024]  Open
17
Gu M, Liu H, Jiang X, Qiu S, Li K, Lu J, Zhang M, Qiu Y, Wang B, Ma Z, Gan Q. Analysis of Rumen Degradation Characteristics, Attached Microbial Community, and Cellulase Activity Changes of Garlic Skin and Artemisia argyi Stalk. Animals (Basel) 2024;14:169. [PMID: 38200900 PMCID: PMC10778316 DOI: 10.3390/ani14010169] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 12/28/2023] [Accepted: 12/29/2023] [Indexed: 01/12/2024]  Open
18
Pinnell LJ, Young JD, Thompson TW, Wolfe CA, Bryant TC, Nair MN, Richeson JT, Morley PS. Establishing the link between microbial communities in bovine liver abscesses and the gastrointestinal tract. Anim Microbiome 2023;5:58. [PMID: 37986094 PMCID: PMC10662489 DOI: 10.1186/s42523-023-00278-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 10/27/2023] [Indexed: 11/22/2023]  Open
19
Mao Y, Wang F, Kong W, Wang R, Liu X, Ding H, Ma Y, Guo Y. Dynamic changes of rumen bacteria and their fermentative ability in high-producing dairy cows during the late perinatal period. Front Microbiol 2023;14:1269123. [PMID: 37817752 PMCID: PMC10560760 DOI: 10.3389/fmicb.2023.1269123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2023] [Accepted: 08/31/2023] [Indexed: 10/12/2023]  Open
20
Liu L, Wu P, Guo A, Yang Y, Chen F, Zhang Q. Research progress on the regulation of production traits by gastrointestinal microbiota in dairy cows. Front Vet Sci 2023;10:1206346. [PMID: 37592942 PMCID: PMC10427726 DOI: 10.3389/fvets.2023.1206346] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2023] [Accepted: 07/20/2023] [Indexed: 08/19/2023]  Open
21
Freetly HC, Lindholm-Perry AK. Rumen and cecum bacteria of beef cattle that differ in feed efficiency fed a forage diet. J Anim Sci 2023;101:skad292. [PMID: 37666002 PMCID: PMC10552577 DOI: 10.1093/jas/skad292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Accepted: 08/31/2023] [Indexed: 09/06/2023]  Open
22
Betancur-Murillo CL, Aguilar-Marín SB, Jovel J. Prevotella: A Key Player in Ruminal Metabolism. Microorganisms 2022;11:microorganisms11010001. [PMID: 36677293 PMCID: PMC9866204 DOI: 10.3390/microorganisms11010001] [Citation(s) in RCA: 79] [Impact Index Per Article: 26.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 12/15/2022] [Accepted: 12/17/2022] [Indexed: 12/24/2022]  Open
23
The Microbial Ecology of Liver Abscesses in Cattle. Vet Clin North Am Food Anim Pract 2022;38:367-381. [DOI: 10.1016/j.cvfa.2022.08.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]  Open
24
Klassen L, Reintjes G, Li M, Jin L, Amundsen C, Xing X, Dridi L, Castagner B, Alexander TW, Abbott DW. Fluorescence activated cell sorting and fermentation analysis to study rumen microbiome responses to administered live microbials and yeast cell wall derived prebiotics. Front Microbiol 2022;13:1020250. [PMID: 36938132 PMCID: PMC10022430 DOI: 10.3389/fmicb.2022.1020250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Accepted: 12/12/2022] [Indexed: 03/06/2023]  Open
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