1
|
Vermelho AB, Moreira JV, Akamine IT, Cardoso VS, Mansoldo FRP. Agricultural Pest Management: The Role of Microorganisms in Biopesticides and Soil Bioremediation. PLANTS (BASEL, SWITZERLAND) 2024; 13:2762. [PMID: 39409632 PMCID: PMC11479090 DOI: 10.3390/plants13192762] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/06/2024] [Revised: 08/28/2024] [Accepted: 09/27/2024] [Indexed: 10/20/2024]
Abstract
Pesticide use in crops is a severe problem in some countries. Each country has its legislation for use, but they differ in the degree of tolerance for these broadly toxic products. Several synthetic pesticides can cause air, soil, and water pollution, contaminating the human food chain and other living beings. In addition, some of them can accumulate in the environment for an indeterminate amount of time. The agriculture sector must guarantee healthy food with sustainable production using environmentally friendly methods. In this context, biological biopesticides from microbes and plants are a growing green solution for this segment. Several pests attack crops worldwide, including weeds, insects, nematodes, and microorganisms such as fungi, bacteria, and viruses, causing diseases and economic losses. The use of bioproducts from microorganisms, such as microbial biopesticides (MBPs) or microorganisms alone, is a practice and is growing due to the intense research in the world. Mainly, bacteria, fungi, and baculoviruses have been used as sources of biomolecules and secondary metabolites for biopesticide use. Different methods, such as direct soil application, spraying techniques with microorganisms, endotherapy, and seed treatment, are used. Adjuvants like surfactants, protective agents, and carriers improve the system in different formulations. In addition, microorganisms are a tool for the bioremediation of pesticides in the environment. This review summarizes these topics, focusing on the biopesticides of microbial origin.
Collapse
Affiliation(s)
- Alane Beatriz Vermelho
- Bioinovar Laboratory, General Microbiology Department, Institute of Microbiology Paulo de Goes, Federal University of Rio de Janeiro, Rio de Janeiro 21941-902, RJ, Brazil; (J.V.M.); (I.T.A.); (V.S.C.); (F.R.P.M.)
- Center of Excellence in Fertilizers and Plant Nutrition (Cefenp), SEDEICS, Rio de Janeiro 21941-850, RJ, Brazil
| | - Jean Vinícius Moreira
- Bioinovar Laboratory, General Microbiology Department, Institute of Microbiology Paulo de Goes, Federal University of Rio de Janeiro, Rio de Janeiro 21941-902, RJ, Brazil; (J.V.M.); (I.T.A.); (V.S.C.); (F.R.P.M.)
| | - Ingrid Teixeira Akamine
- Bioinovar Laboratory, General Microbiology Department, Institute of Microbiology Paulo de Goes, Federal University of Rio de Janeiro, Rio de Janeiro 21941-902, RJ, Brazil; (J.V.M.); (I.T.A.); (V.S.C.); (F.R.P.M.)
| | - Veronica S. Cardoso
- Bioinovar Laboratory, General Microbiology Department, Institute of Microbiology Paulo de Goes, Federal University of Rio de Janeiro, Rio de Janeiro 21941-902, RJ, Brazil; (J.V.M.); (I.T.A.); (V.S.C.); (F.R.P.M.)
| | - Felipe R. P. Mansoldo
- Bioinovar Laboratory, General Microbiology Department, Institute of Microbiology Paulo de Goes, Federal University of Rio de Janeiro, Rio de Janeiro 21941-902, RJ, Brazil; (J.V.M.); (I.T.A.); (V.S.C.); (F.R.P.M.)
| |
Collapse
|
2
|
Bosu S, Rajamohan N, Al Salti S, Rajasimman M, Das P. Biodegradation of chlorpyrifos pollution from contaminated environment - A review on operating variables and mechanism. ENVIRONMENTAL RESEARCH 2024; 248:118212. [PMID: 38272293 DOI: 10.1016/j.envres.2024.118212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Revised: 11/12/2023] [Accepted: 01/13/2024] [Indexed: 01/27/2024]
Abstract
Chlorpyrifos (CPF) is a highly toxic phosphate-rich organic pesticide (OP), identified as an emerging contaminant and used extensively in agricultural production. CPF persistence in the environment and its potential health hazards has become increasingly concerning worldwide in recent years due to exponential rise in food demand. Biodegradation of chlorpyrifos by microbial cultures is a promising approach to reclaiming contaminated soil and aquatic environments. The purpose of this review is to summarize the current understanding of microbiological aspects of xenobiotic chlorpyrifos biodegradation, including microbial diversity, metabolic pathways, and factors that modulate it. In both aerobic and anaerobic environments, CPF is biochemically broken down by a broad spectrum of bacteria and fungi. Hydrolysis, dehalogenation, and oxidation of chlorpyrifos are all enzymatic reactions that lead to its degradation. Biodegradation rate and efficiency are strongly influenced by parametric variables such as co-substrates abundance, pH, temperature, and initial chlorpyrifos concentration. The review provides evidence that microbial biodegradation is a viable method for remediating chlorpyrifos-contaminated sites in a sustainable and safe manner.
Collapse
Affiliation(s)
- Subrajit Bosu
- Department of Chemical and Materials Engineering, University of Kentucky, Lexington, KY 40506, USA
| | - Natarajan Rajamohan
- Chemical Engineering Section, Faculty of Engineering, Sohar University, Sohar, P C-311, Oman.
| | - Shatha Al Salti
- Chemical Engineering Section, Faculty of Engineering, Sohar University, Sohar, P C-311, Oman
| | | | - Papiya Das
- Chemical Engineering Section, Faculty of Engineering, Sohar University, Sohar, P C-311, Oman
| |
Collapse
|
3
|
Zhang G, Xue J, Zhang Y, Ye J, Zhang N, Fang L, Shi T, Ma X, Li H, Hua R. Significantly enhanced biodegradation of profenofos by Cupriavidus nantongensis X1 T mediated by walnut shell biochar. JOURNAL OF HAZARDOUS MATERIALS 2024; 468:133750. [PMID: 38368682 DOI: 10.1016/j.jhazmat.2024.133750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 01/27/2024] [Accepted: 02/06/2024] [Indexed: 02/20/2024]
Abstract
The feasibility of using walnut shell biochar to mediate biodegradation of Cupriavidus nantongensis X1T for profenofos was investigated. The results of scanning electron microscopy, classical DLVO theory and Fourier transform infrared spectroscopy indicated that strain X1T was stably immobilized on biochar by pore filling, van der Waals attraction, and hydrogen bonding. Profenofos degradation experiments showed that strain X1T immobilized on biochar significantly decomposed profenofos (shortened the half-life by 5.2 folds) by promoting the expression of the degradation gene opdB and the proliferation of strain X1T. The immobilized X1T showed stronger degradation ability than the free X1T at higher initial concentration, lower temperature and pH. The immobilized X1T could maintain 83% of removal efficiency for profenofos after 6 reuse cycles in paddy water. Thus, X1T immobilized using walnut shell biochar as a carrier could be practically applied to biodegradation of organophosphorus pesticides present in agricultural water.
Collapse
Affiliation(s)
- Genrong Zhang
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Jingfeng Xue
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Yufei Zhang
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Jia Ye
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Nan Zhang
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Liancheng Fang
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China; Institute for Green Development, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Taozhong Shi
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Xin Ma
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China
| | - Hui Li
- Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI 48824, USA
| | - Rimao Hua
- Anhui Provincial Key Laboratory for Quality and Safety of Agri-Products, School of Resource & Environment, Anhui Agricultural University, Hefei, Anhui 230036, China; Institute for Green Development, Anhui Agricultural University, Hefei, Anhui 230036, China.
| |
Collapse
|
4
|
Aziz K, Naz A, Raza N, Manzoor S, Kim KH. Reduced and modified graphene oxide with Ag/V 2O 5 as a ternary composite visible light photocatalyst against dyes and pesticides. ENVIRONMENTAL RESEARCH 2024; 247:118256. [PMID: 38266900 DOI: 10.1016/j.envres.2024.118256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 11/28/2023] [Accepted: 12/09/2023] [Indexed: 01/26/2024]
Abstract
Water pollution by dyes and pesticides poses significant threats to our ecosystem. In this research, a visible-light ternary composite photocatalytic system was fabricated using graphene oxide (GO) by reducing with N2H4, modifying with KOH, and decorating with Ag/V2O5. The fabricated photocatalysts were characterized through FTIR, SEM, XRD, BET, PL, EDX, ESR, UV-vis spectroscopy, TGA, ESI-MS, and Raman spectroscopy. The point zero charge of the reduced and modified GO (RMGO/Ag/V2O5) was measured to be 6.7 by the pH drift method. This ternary composite was able to achieve complete removal of methyl orange (MO) and chlorpyrifos (CP) in solutions in 80 min under the optimum operation conditions (e.g., in terms of pollutant/catalyst concentrations, pH effects, and contact time). The role of active species responsible for photocatalytic activity was confirmed by scavenger analysis and ESR investigations. The potential mechanism for photocatalytic activity was studied through a fragmentation process carried out by MS analysis. Through nonlinear fitting of the experimental data, MO and CP exhibited the best fit results with the pseudo 1st-order kinetics (quantum yields of 1.07 × 10-3 and 2.16 × 10-3 molecules photon-1 and space-time yields of 1.53 × 10-5 and 2.7 × 10-5 molecules photon-1 mg-1, respectively). The structure of the nanomaterials remained mostly intact to support increased stability and reusability of the prepared photocatalysts even after 10 successive regeneration cycles.
Collapse
Affiliation(s)
- Khalid Aziz
- Institute of Chemical Sciences, Bahauddin Zakariya University, Multan, Pakistan
| | - Asma Naz
- Institute of Chemical Sciences, Bahauddin Zakariya University, Multan, Pakistan.
| | - Nadeem Raza
- Department of Chemistry, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, 11623, Saudi Arabia
| | - Shamaila Manzoor
- Department of Experimental Physics, Faculty of Mathematics, Physics and Informatics, Comenius University, Mlynská Dolina, Bratislava, 842 48, Slovakia
| | - Ki-Hyun Kim
- Department of Civil and Environmental Engineering, Hanyang University, Seoul, 04763, Republic of Korea.
| |
Collapse
|
5
|
Thakar SP, Dabhi RC, Rathod SL, Patel UP, Rana A, Shrivastav PS, George LB, Highland H. In situ chlorpyrifos (CPF) degradation by Acrobeloides maximus: Insights from chromatographic analysis. J Chromatogr A 2024; 1714:464555. [PMID: 38091714 DOI: 10.1016/j.chroma.2023.464555] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Revised: 11/24/2023] [Accepted: 11/30/2023] [Indexed: 01/05/2024]
Abstract
The objective of this study was to evaluate the efficiency of nematodes in zooremediation of chlorpyrifos (CPF), an organophosphate pesticide. The nematode population Acrobeloides maximus (A. maximus) was employed for bioremediation, converting CPF into non-toxic residues. Optimal growth conditions for mass production of A. maximus were achieved by maintaining a temperature of 25 °C, pH 8, and supplementing the culture medium with plant nutrients. The nematodes were then immobilized within sodium alginate beads. The efficacy of the degradation process was assessed using various analytical techniques, including UV-Visible spectroscopy, HPTLC, FTIR, and LC-MS, confirming the successful breakdown of CPF. The bioreactor demonstrated a complete degradation efficiency of CPF exceeding 99%. Additionally, LC-MS analysis was conducted to elucidate the degradation pathway based on the formation of intermediates. These results underscore the potential of A. maximus as a sustainable organism for addressing environmental contamination arising from CPF pesticide.
Collapse
Affiliation(s)
- Shweta P Thakar
- Department of Zoology, Biomedical Technology, Human Genetics and Wildlife Conservation and Biology, University School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat 380009, India.
| | - Ranjitsinh C Dabhi
- Department of Chemistry, University School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat 380009, India
| | - Suryajit L Rathod
- Department of Chemistry, University School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat 380009, India
| | - Unnati P Patel
- Department of Chemistry, University School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat 380009, India
| | - Aasha Rana
- Department of Zoology, Faculty of Basic and Applied Sciences, Madhav University, Pindwara, Sirohi, Rajasthan 307026, India
| | - Pranav S Shrivastav
- Department of Chemistry, University School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat 380009, India
| | - Linz-Buoy George
- Department of Zoology, Biomedical Technology, Human Genetics and Wildlife Conservation and Biology, University School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat 380009, India
| | - Hyacinth Highland
- Department of Zoology, Biomedical Technology, Human Genetics and Wildlife Conservation and Biology, University School of Sciences, Gujarat University, Navrangpura, Ahmedabad, Gujarat 380009, India
| |
Collapse
|
6
|
Bhende RS, Bombaywala S, Dafale NA. Unleashing potential of Pseudomonas aeruginosa RNC3 and Stenotrophomonas maltophilia RNC7 for chlorpyrifos biodegradation by genome analysis and kinetic studies. JOURNAL OF HAZARDOUS MATERIALS 2024; 461:132668. [PMID: 37793258 DOI: 10.1016/j.jhazmat.2023.132668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Revised: 09/26/2023] [Accepted: 09/27/2023] [Indexed: 10/06/2023]
Abstract
Chlorpyrifos (CP) is an extensively used organophosphate (OP) pesticide that inhibits the biogeochemical cycle with subsequent loss of soil fertility. In this view, indigenous soil bacteria with significant CP degradation capacity were identified as Pseudomonas aeruginosa RNC3 and Stenotrophomonas maltophilia RNC7 through 16 S rRNA. The optimum values of independent variables for CP degradation were found to be 30 ℃, pH 7, 100 mgL-1 of CP, and 1 OD600 cell culture. RNC3 and RNC7 showed 82.5 mgL-1 and 77.1 mgL-1 CP degradation within 5 days. A Michaelis-Menten kinetic model estimated the degradation rate (Vmax) and substrate binding affinity (Ks) for RNC3 were 1.23 mgL-1h-1 and 123 mgL-1 whereas for RNC7 as 1.19 mgL-1h -1 and 124.3 mgL-1, respectively. The major metabolites 3,5,6-trichloro-2-pyridinol (TCP) and 2-hydroxy pyridine were identified during CP degradation by RNC3 whereas, only TCP by RNC7 using GC-MS. Key enzymes encoded by opd and opch2 genes were annotated in the genomes of RNC3 and RNC7 along with the set of putative degradation genes (tcp, yieH, pho, prp). Protein-ligand docking between OPCH2 and CP found - 7.9 kcal mol -1 as a high binding affinity with the conserved catalytic triad (Ser155-Asp251-His281) in the active site. The study suggests that RNC3 can completely mineralize CP, whereas both strains have shown robust degradation ability of OP group of pesticides. The potential of rapid acclimatization to natural soil environment and non-virulent nature of the selected strains are beneficial for in situ application. Thus, selected indigenous strains can be applied for the bioremediation of OP-contaminated soil.
Collapse
Affiliation(s)
- Rahul S Bhende
- Environmental Biotechnology & Genomics Division, CSIR-National Environmental Engineering Research Institute (NEERI), Nehru Marg, Nagpur 4400 20, India; Rashtrasant Tukadoji Maharaj Nagpur University, Nagpur, India
| | - Sakina Bombaywala
- Environmental Biotechnology & Genomics Division, CSIR-National Environmental Engineering Research Institute (NEERI), Nehru Marg, Nagpur 4400 20, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Nishant A Dafale
- Environmental Biotechnology & Genomics Division, CSIR-National Environmental Engineering Research Institute (NEERI), Nehru Marg, Nagpur 4400 20, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India; Rashtrasant Tukadoji Maharaj Nagpur University, Nagpur, India.
| |
Collapse
|
7
|
Zhang C, Li J, Wang L, Sun S, Chen C. The effect of neoadjuvant chemotherapy on surgical site wound infection after immediate breast reconstruction in patients with breast cancer: A meta-analysis. Int Wound J 2024; 21:e14337. [PMID: 37548134 PMCID: PMC10777744 DOI: 10.1111/iwj.14337] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2023] [Revised: 07/18/2023] [Accepted: 07/19/2023] [Indexed: 08/08/2023] Open
Abstract
Using a meta-analysis approach, we conducted a comprehensive evaluation of the effect of neoadjuvant chemotherapy (NACT) on the incidence of surgical site wound infection during immediate breast reconstruction (IBR) following breast cancer. The aim was to provide evidence-based support for the prevention of wound surgical site infection during IBR after breast cancer surgery. Relevant literature on the effects of NACT on IBR in patients with breast cancer published up until May 2023, was retrieved from various databases, including PubMed, Cochrane Library, EMBASE, China National Knowledge Infrastructure (CNKI), Wanfang databases, and China Biology Medicine Database. Two researchers performed the literature screening, data collection, and quality assessment of the included studies independently. The meta-analysis was conducted using Stata version 17.0. Fourteen studies involving 3401 patients (599 in the intervention group and 2802 in the control group) were included in the analysis. The incidence of surgical site infection in the NACT group was higher than that in the control group, but the difference between the two groups was not statistically significant (7.17% vs. 4.85%, odds ratio: 1.02, 95% confidence interval: 0.70-1.50, p = 0.902). These findings suggest that NACT does not increase the risk of surgical site infection during IBR. However, owing to the variation in sample size and literature quality among the included studies, randomised controlled trials are needed to confirm the safety of IBR in patients receiving neoadjuvant chemotherapy.
Collapse
Affiliation(s)
- Chao Zhang
- Department of Surgical OncologyThe First Affiliated Hospital of Bengbu Medical CollegeBengbuChina
| | - Juanjuan Li
- Department of GastroenterologySecond Affiliated Hospital of Bengbu Medical CollegeBengbuChina
| | - Lin Wang
- Department of Surgical OncologyThe First Affiliated Hospital of Bengbu Medical CollegeBengbuChina
| | - Siyu Sun
- Department of Surgical OncologyThe First Affiliated Hospital of Bengbu Medical CollegeBengbuChina
| | - Chunchun Chen
- Department of Surgical OncologyThe First Affiliated Hospital of Bengbu Medical CollegeBengbuChina
| |
Collapse
|
8
|
Liu C, Zhao C, Wang L, Du X, Zhu L, Wang J, Mo Kim Y, Wang J. Biodegradation mechanism of chlorpyrifos by Bacillus sp. H27: Degradation enzymes, products, pathways and whole genome sequencing analysis. ENVIRONMENTAL RESEARCH 2023; 239:117315. [PMID: 37805180 DOI: 10.1016/j.envres.2023.117315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 10/04/2023] [Accepted: 10/04/2023] [Indexed: 10/09/2023]
Abstract
Chlorpyrifos (CP) is a pesticide widely used in agricultural production. However, excessive use of CP is risky for human health and the ecological environment. Microbial remediation has become a research hotspot of environmental pollution control. In this study, the effective CP-degrading strain H27 (Bacillus cereus) was screened from farmland soil, and the degradation ratio was more than 80%. Then, the degradation mechanism was discussed in terms of enzymes, pathways, products and genes, and the mechanism was improved in terms of cell motility, secretory transport system and biofilm formation. The key CP-degrading enzymes were mainly intracellular enzymes (IE), and the degradation ratio reached 49.6% within 30 min. The optimal pH for IE was 7.0, and the optimal temperature was 25 °C. Using DFT and HPLC‒MS analysis, it was found that degradation mainly involved oxidation, hydrolysis and other reactions, and 3 degradation pathways and 14 products were identified, among which TCP (3,5,6-trichloro-2-pyridinol) was the main primary degradation product in addition to small molecules such as CO2 and H2O. Finally, the whole genome of strain H27 was sequenced, and the related degrading genes and enzymes were investigated to improve the metabolic pathways. Strain H27 had perfect genes related to flagellar assembly and chemotaxis and tended to tolerate CP. Moreover, it can secrete esterase, phosphatase and other substances, which can form biofilms and degrade CP in the environment. In addition, CP enters the cell under the action of permeases or transporters, and it is metabolized by IE. The degradation mechanism of CP by strain H27 is speculated in this study, which provided a theoretical basis for enriching CP-degrading bacteria resources, improving degradation metabolic pathways and mechanisms, and applying strain H27 to environmental pollution remediation.
Collapse
Affiliation(s)
- Changrui Liu
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Key Laboratory of Agricultural Environment in Universities of Shandong, College of Resources and Environment, Shandong Agricultural University, Taian, 271018, China.
| | - Changyu Zhao
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Key Laboratory of Agricultural Environment in Universities of Shandong, College of Resources and Environment, Shandong Agricultural University, Taian, 271018, China.
| | - Lanjun Wang
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Key Laboratory of Agricultural Environment in Universities of Shandong, College of Resources and Environment, Shandong Agricultural University, Taian, 271018, China.
| | - Xiaomin Du
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Key Laboratory of Agricultural Environment in Universities of Shandong, College of Resources and Environment, Shandong Agricultural University, Taian, 271018, China.
| | - Lusheng Zhu
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Key Laboratory of Agricultural Environment in Universities of Shandong, College of Resources and Environment, Shandong Agricultural University, Taian, 271018, China.
| | - Jun Wang
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Key Laboratory of Agricultural Environment in Universities of Shandong, College of Resources and Environment, Shandong Agricultural University, Taian, 271018, China.
| | - Young Mo Kim
- Department of Civil and Environmental Engineering, Hanyang University, Seongdong-gu, Seoul, 04763, Republic of Korea.
| | - Jinhua Wang
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Key Laboratory of Agricultural Environment in Universities of Shandong, College of Resources and Environment, Shandong Agricultural University, Taian, 271018, China.
| |
Collapse
|
9
|
Guerrero Ramírez JR, Ibarra Muñoz LA, Balagurusamy N, Frías Ramírez JE, Alfaro Hernández L, Carrillo Campos J. Microbiology and Biochemistry of Pesticides Biodegradation. Int J Mol Sci 2023; 24:15969. [PMID: 37958952 PMCID: PMC10649977 DOI: 10.3390/ijms242115969] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 10/17/2023] [Accepted: 10/20/2023] [Indexed: 11/15/2023] Open
Abstract
Pesticides are chemicals used in agriculture, forestry, and, to some extent, public health. As effective as they can be, due to the limited biodegradability and toxicity of some of them, they can also have negative environmental and health impacts. Pesticide biodegradation is important because it can help mitigate the negative effects of pesticides. Many types of microorganisms, including bacteria, fungi, and algae, can degrade pesticides; microorganisms are able to bioremediate pesticides using diverse metabolic pathways where enzymatic degradation plays a crucial role in achieving chemical transformation of the pesticides. The growing concern about the environmental and health impacts of pesticides is pushing the industry of these products to develop more sustainable alternatives, such as high biodegradable chemicals. The degradative properties of microorganisms could be fully exploited using the advances in genetic engineering and biotechnology, paving the way for more effective bioremediation strategies, new technologies, and novel applications. The purpose of the current review is to discuss the microorganisms that have demonstrated their capacity to degrade pesticides and those categorized by the World Health Organization as important for the impact they may have on human health. A comprehensive list of microorganisms is presented, and some metabolic pathways and enzymes for pesticide degradation and the genetics behind this process are discussed. Due to the high number of microorganisms known to be capable of degrading pesticides and the low number of metabolic pathways that are fully described for this purpose, more research must be conducted in this field, and more enzymes and genes are yet to be discovered with the possibility of finding more efficient metabolic pathways for pesticide biodegradation.
Collapse
Affiliation(s)
- José Roberto Guerrero Ramírez
- Instituto Tecnológico de Torreón, Tecnológico Nacional de México, Torreon 27170, Coahuila, Mexico; (J.R.G.R.); (J.E.F.R.); (L.A.H.)
| | - Lizbeth Alejandra Ibarra Muñoz
- Laboratorio de Biorremediación, Facultad de Ciencias Biológicas, Universidad Autónoma de Coahuila, Torreon 27275, Coahuila, Mexico; (L.A.I.M.); (N.B.)
| | - Nagamani Balagurusamy
- Laboratorio de Biorremediación, Facultad de Ciencias Biológicas, Universidad Autónoma de Coahuila, Torreon 27275, Coahuila, Mexico; (L.A.I.M.); (N.B.)
| | - José Ernesto Frías Ramírez
- Instituto Tecnológico de Torreón, Tecnológico Nacional de México, Torreon 27170, Coahuila, Mexico; (J.R.G.R.); (J.E.F.R.); (L.A.H.)
| | - Leticia Alfaro Hernández
- Instituto Tecnológico de Torreón, Tecnológico Nacional de México, Torreon 27170, Coahuila, Mexico; (J.R.G.R.); (J.E.F.R.); (L.A.H.)
| | - Javier Carrillo Campos
- Facultad de Zootecnia y Ecología, Universidad Autónoma de Chihuahua, Chihuahua 31453, Chihuahua, Mexico
| |
Collapse
|
10
|
Kumar P, Arshad M, Gacem A, Soni S, Singh S, Kumar M, Yadav VK, Tariq M, Kumar R, Shah D, Wanale SG, Al Mesfer MKM, Bhutto JK, Yadav KK. Insight into the environmental fate, hazard, detection, and sustainable degradation technologies of chlorpyrifos-an organophosphorus pesticide. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:108347-108369. [PMID: 37755596 DOI: 10.1007/s11356-023-30049-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 09/19/2023] [Indexed: 09/28/2023]
Abstract
Pesticides play a critical role in terms of agricultural output nowadays. On top of that, pesticides provide economic support to our farmers. However, the usage of pesticides has created a public health issue and environmental hazard. Chlorpyrifos (CPY), an organophosphate pesticide, is extensively applied as an insecticide, acaricide, and termiticide against pests in various applications. Environmental pollution has occurred because of the widespread usage of CPY, harming several ecosystems, including soil, sediment, water, air, and biogeochemical cycles. While residual levels in soil, water, vegetables, foodstuffs, and human fluids have been discovered, CPY has also been found in the sediment, soil, and water. The irrefutable pieces of evidence indicate that CPY exposure inhibits the choline esterase enzyme, which impairs the ability of the body to use choline. As a result, neurological, immunological, and psychological consequences are seen in people and the natural environment. Several research studies have been conducted worldwide to identify and develop CPY remediation approaches and its derivatives from the environment. Currently, many detoxification methods are available for pesticides, such as CPY. However, recent research has shown that the breakdown of CPY using bacteria is the most proficient, cost-effective, and sustainable. This current article aims to outline relevant research events, summarize the possible breakdown of CPY into various compounds, and discuss analytical summaries of current research findings on bacterial degradation of CPY and the potential degradation mechanism.
Collapse
Affiliation(s)
- Pankaj Kumar
- Department of Environmental Science, Parul Institute of Applied Sciences, Parul University, Vadodara, Gujarat, 391760, India
| | - Muhammad Arshad
- Department of Chemical Engineering, College of Engineering, King Khalid University, P.O. Box 960, Abha, 61421, Saudi Arabia
| | - Amel Gacem
- Department of Physics, Faculty of Sciences, University 20 Août 1955, Skikda, Algeria
| | - Sunil Soni
- School of Environment and Sustainable Development, Central University of Gujarat, Gandhinagar, Gujarat, 382030, India
| | - Snigdha Singh
- Department of Environmental Science, Parul Institute of Applied Sciences, Parul University, Vadodara, Gujarat, 391760, India
| | - Manoj Kumar
- Environment and Biofuel Research Laboratory, Department of Hydro and Renewable Energy, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, 247667, India
| | - Virendra Kumar Yadav
- Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, 384265, India
| | - Mohd Tariq
- Department of Life Science, Parul Institute of Applied Sciences, Parul University, Vadodara, Gujarat, 391760, India
| | - Ramesh Kumar
- Department of Environmental Science, School of Earth Sciences, Central University of Rajasthan, Ajmer, 305817, India
| | - Deepankshi Shah
- Department of Environmental Science, Parul Institute of Applied Sciences, Parul University, Vadodara, Gujarat, 391760, India
| | - Shivraj Gangadhar Wanale
- School of Chemical Sciences, Swami Ramanand Teerth Marathwada University, Nanded, Maharashtra, India
| | | | - Javed Khan Bhutto
- Department of Electrical Engineering, College of Engineering, King Khalid University, Abha, Saudi Arabia
| | - Krishna Kumar Yadav
- Faculty of Science and Technology, Madhyanchal Professional University, Ratibad, Bhopal, Madhya Pradesh, 462044, India.
- Environmental and Atmospheric Sciences Research Group, Scientific Research Center, Al-Ayen University, Thi-Qar, Nasiriyah, 64001, Iraq.
| |
Collapse
|
11
|
Wang B, Chen J, Wu S, Fang J, Li Q, Wang G. Reusable carboxylesterase immobilized in ZIF for efficient degradation of chlorpyrifos in enviromental water. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2023; 194:105519. [PMID: 37532333 DOI: 10.1016/j.pestbp.2023.105519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Revised: 07/03/2023] [Accepted: 07/05/2023] [Indexed: 08/04/2023]
Abstract
The past few decades have witnessed biodegradation of pesticides as a significant method in remediation of the environment for its specificity, efficiency and biocompatibility. However, the tolerability and recyclability of the enzymes in pesticide degradation and the development of enzymes that biodegrad pesticides are still urgent problems to be solved so far. Herein, a novel hyper-thermostable and chlorpyrifos-hydrolyzing carboxylesterase EstC was immobilized by biomineralization using zeolitic imidazolate framework (ZIF), one of the metal-organic frameworks (MOFs) with highly diverse structure and porosity. Compared with free enzyme, EstC@ZIF with a cruciate flower-like morphology presented scarcely variation in catalytic efficiency and generally improved the tolerance to organic solvents or detergents. Furthermore, there was scarcely decrease in the catalytic efficiency of EstC@ZIF and it also showed good reusability with about 50% residual activity after 12 continuous uses. Notably, EstC@ZIF could be used in actual water environment with an excellent value of degradation rate of 90.27% in 120 min, and the degradation efficiency remained about 50% after 9 repetitions. The present strategy of immobilizing carboxylesterase to treat pesticide-contaminated water broadens the method of immobilized enzymes on MOFs, and envisions its recyclable applicability in globe environmental remediation.
Collapse
Affiliation(s)
- Baojuan Wang
- Anhui Provincial Key Laboratory of Molecular Enzymology and Mechanism of Major Diseases and Key Laboratory of Biomedicine in Gene Diseases and Health of Anhui Higher Education Institutes, College of Life Sciences, Anhui Normal University, Wuhu 241000, Anhui, PR China.
| | - Jie Chen
- Anhui Provincial Key Laboratory of Molecular Enzymology and Mechanism of Major Diseases and Key Laboratory of Biomedicine in Gene Diseases and Health of Anhui Higher Education Institutes, College of Life Sciences, Anhui Normal University, Wuhu 241000, Anhui, PR China
| | - Shuang Wu
- Anhui Provincial Key Laboratory of Molecular Enzymology and Mechanism of Major Diseases and Key Laboratory of Biomedicine in Gene Diseases and Health of Anhui Higher Education Institutes, College of Life Sciences, Anhui Normal University, Wuhu 241000, Anhui, PR China
| | - Jinxin Fang
- Anhui Provincial Key Laboratory of Molecular Enzymology and Mechanism of Major Diseases and Key Laboratory of Biomedicine in Gene Diseases and Health of Anhui Higher Education Institutes, College of Life Sciences, Anhui Normal University, Wuhu 241000, Anhui, PR China
| | - Quanfa Li
- Anhui Provincial Key Laboratory of Molecular Enzymology and Mechanism of Major Diseases and Key Laboratory of Biomedicine in Gene Diseases and Health of Anhui Higher Education Institutes, College of Life Sciences, Anhui Normal University, Wuhu 241000, Anhui, PR China
| | - Guangfeng Wang
- Key Laboratory of Chem-Biosensing of Anhui Province, Key Laboratory of Functional Molecular Solids of Anhui Province, College of Chemistry and Materials Science, Anhui Normal University, Wuhu 241000, PR China.
| |
Collapse
|
12
|
Identification of two possible metabolic pathways responsible for the biodegradation of 3, 5, 6-trichloro-2-pyridinol in Micrococcus luteus ML. Biodegradation 2023; 34:371-381. [PMID: 36879077 DOI: 10.1007/s10532-023-10023-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2022] [Accepted: 02/06/2023] [Indexed: 03/08/2023]
Abstract
3, 5, 6-Trichloro-2-pyridinol (TCP) is a metabolite of the insecticide chlorpyrifos and the herbicide triclopyr, and it is higher toxic than the parent compounds. Microbially-mediated mineralization appears to be the primary degradative pathway and the important biological process of detoxification. However, little information is available on TCP complete metabolic pathways and mechanisms. In this study, the degradation of TCP was studied with a novel strain Micrococcus luteus ML isolated from a stable TCP degrading microbiota. Strain ML was capable of degrading 61.6% of TCP (50 mg/L) and 35.4% of chlorpyrifos (50 mg/L) at 24 h and 48 h under the optimal conditions (temperature: 35 °C; pH: 7.0), respectively. It could also degrade 3, 5-dichloro-2-pyridone, 6-chloropyridin-2-ol, 2-hydroxypyridine and phoxim when provided as sole carbon and energy sources. Seven TCP intermediate metabolites were detected in strain ML and two possible degradation pathways of TCP were proposed on the basis of LC-MS analysis. Both the hydrolytic-oxidative dechlorination pathway and the denitrification pathway might be involved in TCP biodegradation by strain ML. To the best of our knowledge, this is the first report on two different pathways responsible for TCP degradation in one strain, and this finding also provides novel information for studying the metabolic mechanism of TCP in pure culture.
Collapse
|
13
|
Li M, Li L, Sun Y, Ma H, Zhang H, Li F. Facile synthesis of dual-hydrolase encapsulated magnetic ZIF-8 composite for efficient removal of multi-pesticides induced pollution in water. CHEMOSPHERE 2023; 314:137673. [PMID: 36584821 DOI: 10.1016/j.chemosphere.2022.137673] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Revised: 12/12/2022] [Accepted: 12/25/2022] [Indexed: 06/17/2023]
Abstract
Multi-pesticides pollution induced by organophosphorus insecticides (OPs) and aryloxyphenoxypropionate herbicides (AOPPs) has become a significant challenge in bioremediation of water pollution due to their prolonged and over application. Though a number of physical, chemical, and biological approaches have been developed for different pesticides, the explorations usually focus on eliminating single pesticide pollution. Herein, a heterostructure nanocomposite OPH/QpeH@mZIF-8, encapsulating OPs hydrolase OPH and AOPPs hydrolase QpeH in the magnetic zeolitic imidazolate frameworks-8 (mZIF-8), was synthesized through a facile one-pot method in aqueous solution. The immobilized OPH and QpeH in mZIF-8 showed high activities towards the two most common OPs and AOPPs, i.e., chlorpyrifos and quizalofop-P-ethyl, which were hydrolyzed to 3,5,6-Trichloro-2-pyridino (TCP) and quizalofop acid, respectively. Moreover, the magnetic nanocatalyst possessed great tolerance towards broad pH range, high temperatures, and different chemical solvents and excellent recyclability. More importantly, compared to free OPH and QpeH, OPH/QpeH@mZIF-8, with significantly enhanced degradation capability, exhibited enormous potential for simultaneous removal of chlorpyrifos and quizalofop-p-ethyl from the surface and industrial wastewater. Overall, the study demonstrates the applicability of this strategy for utilizing magnetic nanocatalysts encapsulating multiple enzymes due to its simplicity, high efficiency, and economic benefits to removing pesticide compound pollution from various water resources.
Collapse
Affiliation(s)
- Mengya Li
- College of Life Sciences, Huaibei Normal University, Huaibei, 235000, China
| | - Lei Li
- College of Life Sciences, Huaibei Normal University, Huaibei, 235000, China
| | - Yue Sun
- College of Life Sciences, Huaibei Normal University, Huaibei, 235000, China
| | - Hengyan Ma
- College of Life Sciences, Huaibei Normal University, Huaibei, 235000, China
| | - Hui Zhang
- College of Life Sciences, Huaibei Normal University, Huaibei, 235000, China.
| | - Feng Li
- College of Life Sciences, Huaibei Normal University, Huaibei, 235000, China.
| |
Collapse
|
14
|
Raj A, Kumar A. Recent advances in assessment methods and mechanism of microbe-mediated chlorpyrifos remediation. ENVIRONMENTAL RESEARCH 2022; 214:114011. [PMID: 35985484 DOI: 10.1016/j.envres.2022.114011] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Revised: 07/25/2022] [Accepted: 07/26/2022] [Indexed: 06/15/2023]
Abstract
Chlorpyrifos (CP) is one of the Organophosphorus pesticides (OPs) primarily used in agriculture to safeguard crops from pests and diseases. The pervasive use of chlorpyrifos is hazardous to humans and the environment as it inhibits the receptor for acetylcholinesterase activity, leading to abnormalities linked to the central nervous system. Hence, there is an ardent need to develop an effective and sustainable approach to the on-site degradation of chlorpyrifos. The role of microbes in the remediation of pesticides is considered the most effective and eco-friendly approach, as they have strong degradative potential due to their gene and enzymes naturally adapted to these sites. Several reports have previously been published on exploring the role of microbes in the degradation of CP. However, detection of CP as an environmental contaminant is an essential prerequisite for developing an efficient microbial-mediated biodegradation method with less harmful intermediates. Most of the articles published to date discuss the fate and impact of CP in the environment along with its degradation mechanism but still fail to discuss the analytical portion. This review is focused on the latest developments in the field of bioremediation of CP along with its physicochemical properties, toxicity, fate, and conventional (UV-Visible spectrophotometer, FTIR, NMR, GC-MS, etc) and advanced detection methods (Biosensors and immunochromatography-based methods) from different environmental samples. Apart from it, this review explores the role of metagenomics, system biology, in-silico tools, and genetic engineering in facilitating the bioremediation of CP. One of the objectives of this review is to educate policymakers with scientific data that will enable the development of appropriate strategies to reduce pesticide exposure and the harmful health impacts on both Human and other environmental components. Moreover, this review provides up-to-date developments related to the sustainable remediation of CP.
Collapse
Affiliation(s)
- Aman Raj
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, 470003, MP, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, 470003, MP, India.
| |
Collapse
|
15
|
Malla MA, Dubey A, Kumar A, Vennapu DR, Upadhyay N, Pradhan D, Pradhan RC, Yadav S. Process optimization of cypermethrin biodegradation by regression analysis and parametric modeling along with biochemical degradation pathway. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:77418-77427. [PMID: 35678967 DOI: 10.1007/s11356-022-21191-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Accepted: 05/26/2022] [Indexed: 06/15/2023]
Abstract
Pyrethroid pesticides are of great environmental and health concern with regard to neurotoxicity and ubiquitous occurrence. Here, we reported a new bacterial strain identified as Bacillus cereus AKAD 3-1 that degraded 88.1% of 50 mg/l of cypermethrin in an aqueous medium. The biodegradation of cypermethrin was optimized by CCD (central composite design) and validated by ANN-GA (artificial neural network-genetic algorithm). Both the approaches proved to possess good performance in modeling and optimizing the growth conditions. Results indicated that the process variables have a significant (< 0.0001) impact on cypermethrin biodegradation. Moreover, the predicted CCD model had a "lack of fit p-value" of "0.9975." The optimum CCD and ANN model had an R2 value of 0.9703 and 0.9907, indicating that the two models' experimental and predicted values are closely fitted. The isolate successfully converted cypermethrin to CO2 and phenol without producing any toxic metabolite. Finally, a degradation pathway was proposed with the intermediate compounds identified by GC-MS. The present study highlights an important potential application of strain AKAD 3-1 for the in situ bioremediation of cypermethrin-contaminated environments.
Collapse
Affiliation(s)
- Muneer Ahmad Malla
- Department of Zoology, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India.
| | - Dushyanth Reddy Vennapu
- Department of Pharmaceutical Chemistry, KLE University College of Pharmacy, Belagavi, 590010, India
| | - Niraj Upadhyay
- Department of Chemistry, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Dileswar Pradhan
- Department of Food Process Engineering, National Institute of Technology, Rourkela, India
| | - Rama Chandra Pradhan
- Department of Food Process Engineering, National Institute of Technology, Rourkela, India
| | - Shweta Yadav
- Department of Zoology, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| |
Collapse
|
16
|
Maulida ZN, Azkiya NN, Zahro L, Handayani ASD, Rachmani TPD, Mukaromah AS. IDENTIFICATION OF POTENTIAL SOIL DEGRADING MICROBIALS CONTAMINATED WITH INSECTICIDES. BIOLINK (JURNAL BIOLOGI LINGKUNGAN INDUSTRI KESEHATAN) 2022. [DOI: 10.31289/biolink.v9i1.6364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
The high use of insecticides can cause soil contamination in the rice field environment, so a solution is needed to reduce the contamination and the negative impact on human health. One of the efforts that can be done to overcome this problem was by bioremediation. The bioremediation technique was chosen due to it is eco- friendly, efficient, and cost-effective in its application. However, bioremediation relies on the capacity of living organisms to absorb, accumulate, translocate and detoxify pollutants in a polluted environment. The objective of this study is to explore microbes that can be used as bioremediation agents in soil exposed to various types of insecticide contamination. The results of this study was as many as ±56 species of microbes can be used as bioremediation agents for various types of insecticides so that bioremediation needs to be carried out in order to avoid pesticide residues on soil and agricultural products.
Collapse
|
17
|
Mali H, Shah C, Rudakiya DM, Patel DH, Trivedi U, Subramanian RB. A novel organophosphate hydrolase from Arthrobacter sp. HM01: Characterization and applications. BIORESOURCE TECHNOLOGY 2022; 349:126870. [PMID: 35192947 DOI: 10.1016/j.biortech.2022.126870] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Revised: 02/14/2022] [Accepted: 02/16/2022] [Indexed: 06/14/2023]
Abstract
Bioremediation systems coupled to efficient microbial enzymes have emerged as an attractive approach for the in-situ removal of hazardous organophosphates (OPs) pesticides from the polluted environment. However, the role of engineered enzymes in OPs-degradation is rarely studied. In this study, the potential OPs-hydrolase (opdH) gene (Arthrobacter sp. HM01) was isolated, cloned, expressed, and purified. The recombinant organophosphate hydrolase (ropdH) was ∼29 kDa; which catalyzed a broad-range of OPs-pesticides in organic-solvent (∼99 % in 30 min), and was found to increase the catalytic efficiency by 10-folds over the native enzyme (kcat/Km: 107 M-1s-1). The degraded metabolites were analyzed using HPLC/GCMS. Through site-directed mutagenesis, it was confirmed that, conserved metal-bridged residue (Lys-127), plays a crucial role in OPs-degradation, which shows ∼18-folds decline in OPs-degradation. Furthermore, the catalytic activity and its stability has been enhanced by >2.0-fold through biochemical optimization. Thus, the study suggests that ropdH has all the required properties for OPs bioremediation.
Collapse
Affiliation(s)
- Himanshu Mali
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, Gujarat 388 315, India
| | - Chandni Shah
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, Gujarat 388 315, India
| | - Darshan M Rudakiya
- Synergy Cignpost Diagnostics, 3 Mills Studio, London, E3 3DU, United Kingdom
| | - Darshan H Patel
- Charotar Institute of Paramedical Sciences, Charotar University of Science and Technology, (CHARUSAT), Changa, Gujarat 388421, India
| | - Ujjval Trivedi
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, Gujarat 388 315, India
| | - R B Subramanian
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, Gujarat 388 315, India.
| |
Collapse
|
18
|
Mali H, Shah C, Patel DH, Trivedi U, Subramanian RB. Degradation insight of organophosphate pesticide chlorpyrifos through novel intermediate 2,6-dihydroxypyridine by Arthrobacter sp. HM01. BIORESOUR BIOPROCESS 2022; 9:31. [PMID: 38647761 PMCID: PMC10992969 DOI: 10.1186/s40643-022-00515-5] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Accepted: 03/07/2022] [Indexed: 02/05/2023] Open
Abstract
Organophosphates (OPs) are hazardous pesticides, but an indispensable part of modern agriculture; collaterally contaminating agricultural soil and surrounding water. They have raised serious food safety and environmental toxicity that adversely affect the terrestrial and aquatic ecosystems and therefore, it become essential to develop a rapid bioremediation technique for restoring the pristine environment. A newly OPs degrading Arthrobacter sp. HM01 was isolated from pesticide-contaminated soil and identified by a ribotyping (16S rRNA) method. Genus Arthrobacter has not been previously reported in chlorpyrifos (CP) degradation, which shows 99% CP (100 mg L-1) degradation within 10 h in mMSM medium and also shows tolerance to a high concentration (1000 mg L-1) of CP. HM01 utilized a broad range of OPs pesticides and other aromatic pollutants including intermediates of CP degradation as sole carbon sources. The maximum CP degradation was obtained at pH 7 and 32 °C. During the degradation, a newly identified intermediate 2,6-dihydroxypyridine was detected through TLC/HPLC/LCMS analysis and a putative pathway was proposed for its degradation. The study also revealed that the organophosphate hydrolase (opdH) gene was responsible for CP degradation, and the opdH-enzyme was located intracellularly. The opdH enzyme was characterized from cell free extract for its optimum pH and temperature requirement, which was 7.0 and 50 °C, respectively. Thus, the results revealed the true potential of HM01 for OPs-bioremediation. Moreover, the strain HM01 showed the fastest rate of CP degradation, among the reported Arthrobacter sp.
Collapse
Affiliation(s)
- Himanshu Mali
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, 388 315, Gujarat, India
| | - Chandni Shah
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, 388 315, Gujarat, India
| | - Darshan H Patel
- Charotar Institute of Paramedical Sciences, Charotar University of Science and Technology (CHARUSAT), Changa, 388421, Gujarat, India
| | - Ujjval Trivedi
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, 388 315, Gujarat, India
| | - R B Subramanian
- P. G. Department of Biosciences, UGC-Centre of Advanced Studies, Satellite Campus, Sardar Patel University, Sardar Patel Maidan, Bakrol-Vadtal Road, Bakrol, 388 315, Gujarat, India.
| |
Collapse
|
19
|
Environmental Distribution, Metabolic Fate, and Degradation Mechanism of Chlorpyrifos: Recent and Future Perspectives. Appl Biochem Biotechnol 2022; 194:2301-2335. [DOI: 10.1007/s12010-021-03713-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Accepted: 10/08/2021] [Indexed: 01/25/2023]
|
20
|
Conde-Avila V, Peña C, Pérez-Armendáriz B, Loera O, Martínez Valenzuela C, Leyva Morales JB, Jesús Bastidas Bastidas PD, Salgado-Lugo H, Ortega Martínez LD. Growth, respiratory activity and chlorpyrifos biodegradation in cultures of Azotobacter vinelandii ATCC 12837. AMB Express 2021; 11:177. [PMID: 34958440 PMCID: PMC8712287 DOI: 10.1186/s13568-021-01339-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2021] [Accepted: 12/15/2021] [Indexed: 11/24/2022] Open
Abstract
This study aimed to evaluate the growth, respiratory activity, and biodegradation of chlorpyrifos in cultures of Azotobacter vinelandii ATCC 12837. A strategy based on the modification of culture media and aeration conditions was carried out to increase the cell concentration of A. vinelandii, in order to favor and determine its tolerance to chlorpyrifos and its degradation ability. The culture in shaken flasks, using sucrose as a carbon source, significantly improved the growth compared to media with mannitol. When the strain was cultivated under oxygen-limited (5.5, 11.25 mmol L−1 h−1) and no-oxygen-limited conditions (22 mmol L−1 h−1), the growth parameters were not affected. In cultures in a liquid medium with chlorpyrifos, the bacteria tolerated a high pesticide concentration (500 ppm) and the growth parameters were improved even under conditions with a reduced carbon source (sucrose 2 g L−1). The strain degraded 99.6% of chlorpyrifos at 60 h of cultivation, in co-metabolism with sucrose; notably, A. vinelandii ATCC 12837 reduced by 50% the initial pesticide concentration in only 6 h (DT50). ![]()
Collapse
|
21
|
Bose S, Kumar PS, Vo DVN. A review on the microbial degradation of chlorpyrifos and its metabolite TCP. CHEMOSPHERE 2021; 283:131447. [PMID: 34467951 DOI: 10.1016/j.chemosphere.2021.131447] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2021] [Revised: 07/01/2021] [Accepted: 07/03/2021] [Indexed: 06/13/2023]
Abstract
Chlorpyrifos (CPF) falls under the category of organophosphorus pesticides which are in huge demand in the agricultural sector. Overuse of this pesticide has led to the degradation of the quality of terrestrial and aquatic life. The chemical is moderately persistent in the environment but its primary metabolite 3,5,6-trichloro-2-pyridinol (TCP) is comparatively highly persistent. Thus, it is important to degrade the chemical and there are many proposed techniques of degradation. Out of which bioremediation is considered to be highly cost-effective and efficient. Many previous studies have attempted to isolate appropriate microbial strains to degrade CPF which established the fact that chlorine atoms released while mineralising TCP inhibits further proliferation of microorganisms. Thus, it has been increasingly important to experiment with strains that can simultaneously degrade both CPF and TCP. In this review paper, the need for degrading CPF specifically the problems related to it has been discussed elaborately. Alongside these, the metabolism pathways undertaken by different kinds of microorganisms have been included. This paper also gives a detailed insight into the potential strains of microorganisms which has been confirmed through experiments conducted previously. It can be concluded that a wide range of microorganisms has to be studied to understand the possibility of applying bioremediation in wastewater treatment to remove pesticide residues. In addition to this, in the case of recalcitrant pesticides, options of treating it with hybrid techniques like bioremediation clubbed with photocatalytic biodegradation can be attempted.
Collapse
Affiliation(s)
- Sanchali Bose
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India
| | - P Senthil Kumar
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India.
| | - Dai-Viet N Vo
- Institute of Environmental Sciences, Nguyen Tat Thanh University, Ho Chi Minh City, Viet Nam
| |
Collapse
|
22
|
Nandhini AR, Harshiny M, Gummadi SN. Chlorpyrifos in environment and food: a critical review of detection methods and degradation pathways. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2021; 23:1255-1277. [PMID: 34553733 DOI: 10.1039/d1em00178g] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Chlorpyrifos (CP) is a class of organophosphorus (OP) pesticides, which find extensive applications as acaricide, insecticide and termiticide. The use of CP has been indicated in environmental contamination and disturbance in the biogeochemical cycles. CP has been reported to be neurotoxic and has a detrimental effect on immunological and psychological health. Therefore, it is necessary to design and develop effective degradation methods for the removal of CP from the environment. In the past few years, physicochemical (advanced oxidation process) and biological treatment approaches have been widely employed for the pesticide removal. However, the byproducts of this process are more toxic than the parent compound and along with an incomplete degradation of CP. This review focuses on the toxicity of CP, the sources of contamination, degradation pathways, physicochemical, biological, and nano-technology based methods employed for the degradation of CP. In addition, consolidated information on various detection methods and materials used for the detection have been provided in this review.
Collapse
Affiliation(s)
- A R Nandhini
- Department of Chemical Engineering, Alagappa College of Technology, Anna University, Chennai-600025, India
| | - M Harshiny
- Applied and Industrial Microbiology Lab, Department of Biotechnology, Indian Institute of Technology Madras, Chennai-600036, India.
| | - Sathyanarayana N Gummadi
- Applied and Industrial Microbiology Lab, Department of Biotechnology, Indian Institute of Technology Madras, Chennai-600036, India.
| |
Collapse
|
23
|
Huang Y, Zhang W, Pang S, Chen J, Bhatt P, Mishra S, Chen S. Insights into the microbial degradation and catalytic mechanisms of chlorpyrifos. ENVIRONMENTAL RESEARCH 2021; 194:110660. [PMID: 33387540 DOI: 10.1016/j.envres.2020.110660] [Citation(s) in RCA: 68] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Revised: 11/20/2020] [Accepted: 12/20/2020] [Indexed: 06/12/2023]
Abstract
Chlorpyrifos is extensively used worldwide as an insecticide to control various insect pests. Long-term and irregular applications of chlorpyrifos have resulted in large-scale soil, groundwater, sediment, and air pollution. Numerous studies have shown that chlorpyrifos and its major intermediate metabolite 3,5,6-trichloropyridinol (TCP) accumulate in non-target organisms through biomagnification and have a strong toxic effect on non-target organisms, including human beings. Bioremediation based on microbial metabolism is considered an eco-friendly and efficient strategy to remove chlorpyrifos residues. To date, a variety of bacterial and fungal species have been isolated and characterized for the biodegradation of chlorpyrifos and TCP. The metabolites and degradation pathways of chlorpyrifos have been investigated. In addition, the chlorpyrifos-degrading enzymes and functional genes in microbes have been reported. Hydrolases can catalyze the first step in ester-bond hydrolysis, and this initial regulatory metabolic reaction plays a key role in the degradation of chlorpyrifos. Previous studies have shown that the active site of hydrolase contains serine residues, which can initiate a catalytic reaction by nucleophilic attack on the P-atom of chlorpyrifos. However, few reviews have focused on the microbial degradation and catalytic mechanisms of chlorpyrifos. Therefore, this review discusses the deep understanding of chlorpyrifos degradation mechanisms with microbial strains, metabolic pathways, catalytic mechanisms, and their genetic basis in bioremediation.
Collapse
Affiliation(s)
- Yaohua Huang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 510642, China
| | - Wenping Zhang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 510642, China
| | - Shimei Pang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 510642, China
| | - Junmin Chen
- College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, China
| | - Pankaj Bhatt
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 510642, China
| | - Sandhya Mishra
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 510642, China
| | - Shaohua Chen
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 510642, China.
| |
Collapse
|