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Nikolova C, Morris G, Ellis D, Bowler B, Jones M, Mulloy B, Gutierrez T. Characterization of the surface-active exopolysaccharide produced by Halomonas sp TGOS-10: Understanding its role in the formation of marine oil snow. PLoS One 2024; 19:e0299235. [PMID: 38805414 PMCID: PMC11132480 DOI: 10.1371/journal.pone.0299235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Accepted: 02/06/2024] [Indexed: 05/30/2024] Open
Abstract
In this study, we characterize the exopolymer produced by Halomonas sp. strain TGOS-10 -one of the organisms found enriched in sea surface oil slicks during the Deepwater Horizon oil spill. The polymer was produced during the early stationary phase of growth in Zobell's 2216 marine medium amended with glucose. Chemical and proton NMR analysis showed it to be a relatively monodisperse, high-molecular-mass (6,440,000 g/mol) glycoprotein composed largely of protein (46.6% of total dry weight of polymer). The monosaccharide composition of the polymer is typical to that of other marine bacterial exopolymers which are generally rich in hexoses, with the notable exception that it contained mannose (commonly found in yeast) as a major monosaccharide. The polymer was found to act as an oil dispersant based on its ability to effectively emulsify pure and complex oils into stable oil emulsions-a function we suspect to be conferred by the high protein content and high ratio of total hydrophobic nonpolar to polar amino acids (52.7:11.2) of the polymer. The polymer's chemical composition, which is akin to that of other marine exopolymers also having a high protein-to-carbohydrate (P/C) content, and which have been shown to effect the rapid and non-ionic aggregation of marine gels, appears indicative of effecting marine oil snow (MOS) formation. We previously reported the strain capable of utilising aromatic hydrocarbons when supplied as single carbon sources. However, here we did not detect biodegradation of these chemicals within a complex (surrogate Macondo) oil, suggesting that the observed enrichment of this organism during the Deepwater Horizon spill may be explained by factors related to substrate availability and competition within the complex and dynamic microbial communities that were continuously evolving during that spill.
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Affiliation(s)
- Christina Nikolova
- Institute of Mechanical, Process, and Energy Engineering, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, United Kingdom
| | - Gordon Morris
- Department of Chemical Sciences, School of Applied Sciences, University of Huddersfield, Huddersfield, United Kingdom
| | - David Ellis
- Department of Chemical Sciences, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, United Kingdom
| | - Bernard Bowler
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle upon Tyne, United Kingdom
| | - Martin Jones
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle upon Tyne, United Kingdom
| | - Barbara Mulloy
- Institute of Pharmaceutical Sciences, King’s College London, London, United Kingdom
| | - Tony Gutierrez
- Institute of Mechanical, Process, and Energy Engineering, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, United Kingdom
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2
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Gan L, Huang X, He Z, He T. Exopolysaccharide production by salt-tolerant bacteria: Recent advances, current challenges, and future prospects. Int J Biol Macromol 2024; 264:130731. [PMID: 38471615 DOI: 10.1016/j.ijbiomac.2024.130731] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Revised: 01/27/2024] [Accepted: 03/06/2024] [Indexed: 03/14/2024]
Abstract
Natural biopolymers derived from exopolysaccharides (EPSs) are considered eco-friendly and sustainable alternatives to available traditional synthetic counterparts. Salt-tolerant bacteria inhabiting harsh ecological niches have evolved a number of unique adaptation strategies allowing them to maintain cellular integrity and assuring their long-term survival; among these, producing EPSs can be adopted as an effective strategy to thrive under high-salt conditions. A great diversity of EPSs from salt-tolerant bacteria have attracted widespread attention recently. Because of factors such as their unique structural, physicochemical, and functional characteristics, EPSs are commercially valuable for the global market and their application potential in various sectors is promising. However, large-scale production and industrial development of these biopolymers are hindered by their low yields and high costs. Consequently, the research progress and future prospects of salt-tolerant bacterial EPSs must be systematically reviewed to further promote their application and commercialization. In this review, the structure and properties of EPSs produced by a variety of salt-tolerant bacterial strains isolated from different sources are summarized. Further, feasible strategies for solving production bottlenecks are discussed, which provides a scientific basis and direct reference for more scientific and rational EPS development.
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Affiliation(s)
- Longzhan Gan
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), College of Life Sciences, Guizhou University, Guiyang 550025, Guizhou Province, China.
| | - Xin Huang
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), College of Life Sciences, Guizhou University, Guiyang 550025, Guizhou Province, China
| | - Zhicheng He
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), College of Life Sciences, Guizhou University, Guiyang 550025, Guizhou Province, China
| | - Tengxia He
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), College of Life Sciences, Guizhou University, Guiyang 550025, Guizhou Province, China.
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Banerjee S, Cabrera-Barjas G, Tapia J, Fabi JP, Delattre C, Banerjee A. Characterization of Chilean hot spring-origin Staphylococcus sp. BSP3 produced exopolysaccharide as biological additive. NATURAL PRODUCTS AND BIOPROSPECTING 2024; 14:15. [PMID: 38310179 PMCID: PMC10838260 DOI: 10.1007/s13659-024-00436-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Accepted: 01/28/2024] [Indexed: 02/05/2024]
Abstract
A type of high molecular weight bioactive polymers called exopolysaccharides (EPS) are produced by thermophiles, the extremophilic microbes that thrive in acidic environmental conditions of hot springs with excessively warm temperatures. Over time, EPS became important as natural biotechnological additives because of their noncytotoxic, emulsifying, antioxidant, or immunostimulant activities. In this article, we unravelled a new EPS produced by Staphylococcus sp. BSP3 from an acidic (pH 6.03) San Pedro hot spring (38.1 °C) located in the central Andean mountains in Chile. Several physicochemical techniques were performed to characterize the EPS structure including Scanning electron microscopy-energy dispersive X-ray spectroscopy (SEM-EDS), Atomic Force Microscopy (AFM), High-Performance Liquid Chromatography (HPLC), Gel permeation chromatography (GPC), Fourier Transform Infrared Spectroscopy (FTIR), 1D Nuclear Magnetic Resonance (NMR), and Thermogravimetric analysis (TGA). It was confirmed that the amorphous surface of the BSP3 EPS, composed of rough pillar-like nanostructures, is evenly distributed. The main EPS monosaccharide constituents were mannose (72%), glucose (24%) and galactose (4%). Also, it is a medium molecular weight (43.7 kDa) heteropolysaccharide. NMR spectroscopy demonstrated the presence of a [→ 6)-⍺-D-Manp-(1 → 6)-⍺-D-Manp-(1 →] backbone 2-O substituted with 1-⍺-D-Manp. A high thermal stability of EPS (287 °C) was confirmed by TGA analysis. Emulsification, antioxidant, flocculation, water-holding (WHC), and oil-holding (OHC) capacities are also studied for biotechnological industry applications. The results demonstrated that BSP3 EPS could be used as a biodegradable material for different purposes, like flocculation and natural additives in product formulation.
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Affiliation(s)
- Srijan Banerjee
- Instituto de Química de Recursos Naturales, Universidad de Talca, CP 3460000, Talca, Chile
| | - Gustavo Cabrera-Barjas
- Universidad San Sebastián Campus Las Tres Pascualas, Facultad de Ciencias Para el Cuidado de la Salud, Lientur 1457, CP 4080871, Concepción, Chile
| | - Jaime Tapia
- Instituto de Química de Recursos Naturales, Universidad de Talca, CP 3460000, Talca, Chile
| | - João Paulo Fabi
- Department of Food Science and Experimental Nutrition, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, SP, Brazil
- Food Research Center (FoRC), CePID-FAPESP (Research, Innovation and Dissemination Centers, São Paulo Research Foundation), São Paulo, SP, Brazil
| | - Cedric Delattre
- Université Clermont Auvergne, Clermont Auvergne INP, CNRS, Institut Pascal, 63000, Clermont-Ferrand, France
- Institut Universitaire de France (IUF), 1 Rue Descartes, 75005, Paris, France
| | - Aparna Banerjee
- Instituto de Ciencias Aplicadas, Facultad de Ingeniería, Universidad Autónoma de Chile, CP 3467987, Talca, Chile.
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Yaşar Yıldız S, Radchenkova N. Exploring Extremophiles from Bulgaria: Biodiversity, Biopolymer Synthesis, Functional Properties, Applications. Polymers (Basel) 2023; 16:69. [PMID: 38201734 PMCID: PMC10780585 DOI: 10.3390/polym16010069] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 12/10/2023] [Accepted: 12/18/2023] [Indexed: 01/12/2024] Open
Abstract
Bulgaria stands out as a country rich in diverse extreme environments, boasting a remarkable abundance of mineral hot waters, which positions it as the second-largest source of such natural resources in Europe. Notably, several thermal and coastal solar salterns within its territory serve as thriving habitats for thermophilic and halophilic microorganisms, which offer promising bioactive compounds, including exopolysaccharides (EPSs). Multiple thermophilic EPS producers were isolated, along with a selection from several saltern environments, revealing an impressive taxonomic and bacterial diversity. Four isolates from three different thermophilic species, Geobacillus tepidamans V264, Aeribacillus pallidus 418, Brevibacillus thermoruber 423, and Brevibacillus thermoruber 438, along with the halophilic strain Chromohalobacter canadensis 28, emerged as promising candidates for further exploration. Optimization of cultivation media and conditions was conducted for each EPS producer. Additionally, investigations into the influence of aeration and stirring in laboratory bioreactors provided valuable insights into growth dynamics and polymer synthesis. The synthesized biopolymers showed excellent emulsifying properties, emulsion stability, and synergistic interaction with other hydrocolloids. Demonstrated biological activities and functional properties pave the way for potential future applications in diverse fields, with particular emphasis on cosmetics and medicine. The remarkable versatility and efficacy of biopolymers offer opportunities for innovation and development in different industrial sectors.
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Affiliation(s)
- Songül Yaşar Yıldız
- Department of Bioengineering, Istanbul Medeniyet University, 34720 Istanbul, Turkey;
| | - Nadja Radchenkova
- The Stephan Angeloff Institute of Microbiology, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
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Ahmad E, Sharma SK, Kashyap AS, Manzar N, Sahu PK, Singh UB, Singh HV, Sharma PK. Evaluation of Osmotolerant Potential of Halomonas sulfidaeris MV-19 Isolated from a Mud Volcano. Curr Microbiol 2023; 80:102. [PMID: 36773109 DOI: 10.1007/s00284-023-03202-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Accepted: 01/25/2023] [Indexed: 02/12/2023]
Abstract
Salinity is one of the major challenges for cultivation of crops in a sustainable way because it severely affects plant growth and yield. Keeping this challenge in view, in the current study, a salt-tolerant Halomonas MV-19 was isolated from an extreme niche of mud volcano of Andaman Nicobar Island, India and identified on the basis of standard morphological, biochemical, and physiological tests and identified as Halomonas sulfidaeris strain MV-19 by 16S rRNA gene sequencing. The bacterium can grow on nutrient agar and nutrient broth supplemented with 3.5 M (≥ 20%) sodium chloride (NaCl). Sugar utilization assay revealed that H. sulfidaeris MV-19 utilizes only three sugars (dextrose, fructose, and mannose) from among twenty four tested sugars. The best growth of H. sulfidaeris MV-19 was observed in nutrient broth supplemented with 8% NaCl. When the broth was supplemented with dextrose, fructose, and mannose, the H. sulfidaeris MV-19 grew maximally in nutrient broth supplemented with 8% NaCl and 5% fructose. This strain produced exopolysaccharides (EPS) in nutrient broth supplemented with 8% NaCl and sugars (dextrose, fructose, and mannose). The EPS production was increased by 350% (three and half time) after addition of 5% fructose in nutrient broth compare with the EPS production in nutrient broth without supplemented with sugars. H. sulfidaeris MV-19 strain can produce EPS, which can help aggregate soil particle and reduced osmotic potential in soil, thus, be useful in alleviation of salinity stress in different crops cultivated in saline soils. The findings of the current investigation are expected to contribute towards effective abiotic stress management.
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Affiliation(s)
- Ees Ahmad
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Uttar Pradesh, 275103, India
| | - Sushil K Sharma
- ICAR-National Institute of Biotic Stress Management, Baronda, Raipur, Chhattisgarh, 493 225, India
| | - Abhijeet S Kashyap
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Uttar Pradesh, 275103, India
| | - Nazia Manzar
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Uttar Pradesh, 275103, India
| | - Pramod K Sahu
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Uttar Pradesh, 275103, India
| | - Udai B Singh
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Uttar Pradesh, 275103, India
| | - Harsh V Singh
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Uttar Pradesh, 275103, India
| | - Pawan K Sharma
- ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Uttar Pradesh, 275103, India.
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El Halmouch Y, Ibrahim HA, Dofdaa NM, Mabrouk ME, El-Metwally MM, Nehira T, Ferji K, Ishihara Y, Matsuo K, Ibrahim MI. Complementary spectroscopy studies and potential activities of levan-type fructan produced by Bacillus paralicheniformis ND2. Carbohydr Polym 2023; 311:120743. [PMID: 37028872 DOI: 10.1016/j.carbpol.2023.120743] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2022] [Revised: 02/19/2023] [Accepted: 02/21/2023] [Indexed: 02/27/2023]
Abstract
This study aimed at the production of marine bacterial exopolysaccharides (EPS) as biodegradable and nontoxic biopolymers, competing the synthetic derivatives, with detailed structural and conformational analyses using spectroscopy techniques. Twelve marine bacterial bacilli were isolated from the seawater of Mediterranean Sea, Egypt, then screened for EPS production. The most potent isolate was identified genetically as Bacillus paralicheniformis ND2 by16S rRNA gene sequence of ~99 % similarity. Plackett-Burman (PB) design identified the optimization conditions of EPS production, which yielded the maximum EPS (14.57 g L-1) with 1.26-fold increase when compared to the basal conditions. Two purified EPSs namely NRF1 and NRF2 with average molecular weights (Mw¯) of 15.98 and 9.70 kDa, respectively, were obtained and subjected for subsequent analyses. FTIR and UV-Vis reflected their purity and high carbohydrate contents while EDX emphasized their neutral type. NMR identified the EPSs as levan-type fructan composed of β-(2-6)-glycosidic linkage as a main backbone, and HPLC explained that the EPSs composed of fructose. Circular dichroism (CD) suggested that NRF1 and NRF2 had identical structuration with a little variation from the EPS-NR. The EPS-NR showed antibacterial activity with the maximum inhibition against S. aureus ATCC 25923. Furthermore, all the EPSs revealed a proinflammatory action through dose-dependent increment of expression of proinflammatory cytokine mRNAs, IL-6, IL-1β and TNFα.
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7
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Maulana A, Adiandri RS, Boopathy R, Setiadi T. Extraction, characterization, and biosurfactant properties of extracellular polymeric substance from textile wastewater activated sludge. J Biosci Bioeng 2022; 134:508-512. [PMID: 36224066 DOI: 10.1016/j.jbiosc.2022.08.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 07/14/2022] [Accepted: 08/16/2022] [Indexed: 11/16/2022]
Abstract
Textile wastewater treatment generates sludge that needs to be disposed of safely. The cost of sludge management is 50% of the total treatment cost of the wastewater. To reduce the expense, the sludge can be repurposed as a valuable resource by extracting extracellular polymeric substance (EPS). EPS contains polysaccharides, proteins, and humic substances, which are surface-active substances that act as potential biosurfactants. In this study, we investigated sludges (sludge 1 and sludge 2) from two different textile industries for EPS production. The results showed a maximum EPS yield of 179 mg/g-activated sludge from the wastewater from sludge 2. The EPS from textile wastewater activated sludge had a protein/carbohydrate ratio of 0.27-0.56, lower than that of municipal activated sludge. This difference is due to variations in nitrogen/carbon ratio in these wastewaters. Based on the biosurfactant activity test, EPS from both textile wastewaters could lower the water surface tension to around 60 mN/m and emulsify olive oil better than Tween 20 and 80. However, only EPS from sludge 2 showed better xylene emulsification than EPS from sludge 1 due to the difference in humic acid content.
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Affiliation(s)
- Aulia Maulana
- Department of Chemical Engineering, Faculty of Industrial Engineering, Institut Teknologi Bandung, Jl. Ganesa 10, Bandung 40116, Indonesia
| | - Resa Setia Adiandri
- Department of Chemical Engineering, Faculty of Industrial Engineering, Institut Teknologi Bandung, Jl. Ganesa 10, Bandung 40116, Indonesia; Indonesian Center for Agricultural Postharvest Research and Development, Jl. Tentara Pelajar 12, Bogor 16124, Indonesia.
| | - Ramaraj Boopathy
- Department of Biological Sciences, Nicholls State University, Thibodaux, LA 70310, USA
| | - Tjandra Setiadi
- Department of Chemical Engineering, Faculty of Industrial Engineering, Institut Teknologi Bandung, Jl. Ganesa 10, Bandung 40116, Indonesia
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Saravanaraj A, Sivanesh N, Anusha S, Surianarayanan M. Metabolic behaviour of Halomanas variabilis in a bio-reaction calorimeter during batch production of extracellular polymeric substances. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2022.108684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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9
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Biswas J, Jana SK, Mandal S. Biotechnological impacts of Halomonas: a promising cell factory for industrially relevant biomolecules. Biotechnol Genet Eng Rev 2022:1-30. [PMID: 36253947 DOI: 10.1080/02648725.2022.2131961] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Accepted: 09/27/2022] [Indexed: 11/02/2022]
Abstract
Extremophiles are the most fascinating life forms for their special adaptations and ability to offer unique extremozymes or bioactive molecules. Halophiles, the natural inhabitants of hypersaline environments, are one among them. Halomonas are the common genus of halophilic bacteria. To support growth in unusual environments, Halomonas produces various hydrolytic enzymes, compatible solutes, biopolymers like extracellular polysaccharides (EPS) and polyhydroxy alkaloates (PHA), antibiotics, biosurfactants, pigments, etc. Many of such molecules are being produced in large-scale bioreactors for commercial use. However, the prospect of the remaining bioactive molecules with industrial relevance is far from their application. Furthermore, the genetic engineering of the respective gene clusters could open up a new path to bio-prospect these molecules by overproducing their products through heterologous expression. The present survey on Halomonas highlights their ecological diversity, application potential of the their various industrially relevant biomolecules and impact of these biomolecules on respective fields.
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Affiliation(s)
- Jhuma Biswas
- Laboratory of Molecular Bacteriology, Department of Microbiology, University of Calcutta, Kolkata, India
| | - Santosh Kumar Jana
- Laboratory of Molecular Bacteriology, Department of Microbiology, University of Calcutta, Kolkata, India
| | - Sukhendu Mandal
- Laboratory of Molecular Bacteriology, Department of Microbiology, University of Calcutta, Kolkata, India
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Gurav R, Bhatia SK, Choi TR, Hyun Cho D, Chan Kim B, Hyun Kim S, Ju Jung H, Joong Kim H, Jeon JM, Yoon JJ, Yun J, Yang YH. Lignocellulosic hydrolysate based biorefinery for marine exopolysaccharide production and application of the produced biopolymer in environmental clean-up. BIORESOURCE TECHNOLOGY 2022; 359:127499. [PMID: 35718248 DOI: 10.1016/j.biortech.2022.127499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Revised: 06/11/2022] [Accepted: 06/15/2022] [Indexed: 06/15/2023]
Abstract
The present study deals with the utilization of lignocellulosic hydrolysate-based carbon source for exopolysaccharide (EPS) production using newly reported marine Echinicola sediminis BBL-M-12. This bacterium produced 7.56 g L-1 and 5.32 g L-1 of EPS on supplementing 30 g L-1 glucose and 10 g L-1 xylose as the sole carbon source, respectively. Whereas on feeding Miscanthus hydrolysate (MCH) with glucose content adjusting to 20 g L-1, E. sediminis BBL-M-12 produced 6.18 g L-1 of EPS. The inhibitors study showed bacterium could tolerate higher concentrations of fermentation inhibitors include furfural (0.05%), 5-hydroxymethylfurfural (0.1%), vanillin (0.1%) and acetate (0.5%). Moreover, the EPS composition was greatly altered with the type and concentration of carbon source supplied, although β-D-Glucopyranose, β-D-Galactopyranose, and β-D-Xylopyranose were the dominant monomers detected. Interestingly, E. sediminis BBL-M-12 EPS revealed excellent environmental applications like clay flocculation, oil emulsification, and removal of humic acid, textile dye, and heavy metal from the aqueous phase.
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Affiliation(s)
- Ranjit Gurav
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Shashi Kant Bhatia
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Tae-Rim Choi
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Do Hyun Cho
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Byung Chan Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Su Hyun Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Hee Ju Jung
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Hyun Joong Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Jong-Min Jeon
- Green & Sustainable Materials R&D Department, Research Institute of Clean Manufacturing System, Korea Institute of Industrial Technology (KITECH), Chungnam 31056, Republic of Korea
| | - Jeong-Jun Yoon
- Green & Sustainable Materials R&D Department, Research Institute of Clean Manufacturing System, Korea Institute of Industrial Technology (KITECH), Chungnam 31056, Republic of Korea
| | - Jeonghee Yun
- Department of Forest Products and Biotechnology, Kookmin University, Seoul 02707, Republic of Korea
| | - Yung-Hun Yang
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea.
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Vandana, Das S. Genetic regulation, biosynthesis and applications of extracellular polysaccharides of the biofilm matrix of bacteria. Carbohydr Polym 2022; 291:119536. [DOI: 10.1016/j.carbpol.2022.119536] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 04/22/2022] [Accepted: 04/22/2022] [Indexed: 11/02/2022]
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12
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The role of microplastics biofilm in accumulation of trace metals in aquatic environments. World J Microbiol Biotechnol 2022; 38:117. [PMID: 35597812 DOI: 10.1007/s11274-022-03293-6] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Accepted: 04/22/2022] [Indexed: 12/11/2022]
Abstract
Microplastics are one of the major contaminants of aquatic nature where they can interact with organic and inorganic pollutants, including trace metals, and adsorb them. At the same time, after the microplastics have entered the aquatic environments, they are quickly covered with a biofilm - microorganisms which are able to produce extracellular polymeric substances (EPS) that can facilitate sorption of trace metals from surrounding water. The microbial community of biofilm contains bacteria which synthesizes EPS with antimicrobial activity making them more competitive than other microbial inhabitants. The trace metal trapping by bacterial EPS can inhibit the development of certain microorganisms, therefore, a single microparticle participates in complex interactions of the diverse elements surrounding it. The presented review aims to consider the variety of interactions associated with the adsorption of trace metal ions on the surface of microplastics covered with biofilm, the fate of such microplastics and the ever-increasing risk to the environment caused by the combination of these large-scale pollutants - microplastics and trace metals. Since aquatic pollution problems affect the entire planet, strict regulation of the production, use, and disposal of plastic materials is needed to mitigate the effects of this emerging pollutant and its complexes could have on the environment and human health.
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Joulak I, Concórdio-Reis P, Torres CAV, Sevrin C, Grandfils C, Attia H, Freitas F, Reis MAM, Azabou S. Sustainable use of agro-industrial wastes as potential feedstocks for exopolysaccharide production by selected Halomonas strains. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:22043-22055. [PMID: 34773587 DOI: 10.1007/s11356-021-17207-w] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Accepted: 10/21/2021] [Indexed: 06/13/2023]
Abstract
Large quantities of waste biomass are generated annually worldwide by many industries and are vastly underutilized. However, these wastes contain sugars and other dissolved organic matter and therefore can be exploited to produce microbial biopolymers. In this study, four selected Halomonas strains, namely, Halomonas caseinilytica K1, Halomonas elongata K4, Halomonas smyrnensis S3, and Halomonas halophila S4, were investigated for the production of exopolysaccharides (EPS) using low-cost agro-industrial wastes as the sole carbon source: cheese whey, grape pomace, and glycerol. Interestingly, both yield and monosaccharide composition of EPS were affected by the carbon source. Glucose, mannose, galactose, and rhamnose were the predominant monomers, but their relative molar ratio was different. Similarly, the average molecular weight of the synthesized EPS was affected, ranging from 54.5 to 4480 kDa. The highest EPS concentration (446 mg/L) was obtained for H. caseinilytica K1 grown on cheese whey that produced an EPS composed mostly of galactose, rhamnose, glucose, and mannose, with lower contents of galacturonic acid, ribose, and arabinose and with a molecular weight of 54.5 kDa. Henceforth, the ability of Halomonas strains to use cost-effective substrates, especially cheese whey, is a promising approach for the production of EPS with distinct physicochemical properties suitable for various applications.
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Affiliation(s)
- Ichrak Joulak
- Laboratoire Analyse, Valorisation Et Sécurité Des Aliments, Université de Sfax, ENIS, 3038, Sfax, Tunisia
| | - Patrícia Concórdio-Reis
- Associate Laboratory i4HB - Institute for Health and Bioeconomy, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
- UCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
| | - Cristiana A V Torres
- Associate Laboratory i4HB - Institute for Health and Bioeconomy, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
- UCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
| | - Chantal Sevrin
- Interfaculty Research Centre of Biomaterials (CEIB), University of Liège, Liège, Belgium
| | - Christian Grandfils
- Interfaculty Research Centre of Biomaterials (CEIB), University of Liège, Liège, Belgium
| | - Hamadi Attia
- Laboratoire Analyse, Valorisation Et Sécurité Des Aliments, Université de Sfax, ENIS, 3038, Sfax, Tunisia
| | - Filomena Freitas
- Associate Laboratory i4HB - Institute for Health and Bioeconomy, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
- UCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
| | - Maria A M Reis
- Associate Laboratory i4HB - Institute for Health and Bioeconomy, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
- UCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, School of Science and Technology, NOVA University Lisbon, Caparica, Lisbon, Portugal
| | - Samia Azabou
- Laboratoire Analyse, Valorisation Et Sécurité Des Aliments, Université de Sfax, ENIS, 3038, Sfax, Tunisia.
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14
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Effect of Gamma Irradiation on Enhanced Biological Activities of Exopolysaccharide from Halomonas desertis G11: Biochemical and Genomic Insights. Polymers (Basel) 2021; 13:polym13213798. [PMID: 34771355 PMCID: PMC8588121 DOI: 10.3390/polym13213798] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 10/11/2021] [Accepted: 10/12/2021] [Indexed: 02/07/2023] Open
Abstract
In this work, a native exopolysaccharide (nEPS) produced by Halomonas desertis G11 isolated from a Tunisian extreme environment was modified by gamma irradiation. Characterization as well as the antioxidant and antitumor activities of nEPS and its gamma-irradiated derivatives (iEPSs) were comparatively evaluated. In vitro and in vivo antioxidant potentials were determined by using different methods and through different antioxidant enzymes. The antitumor activity was checked against a human colon cancer cell line. Analyses of the complete genome sequence were carried out to identify genes implicated in the production of nEPS. Thus, the genomic biosynthesis pathway and the export mechanism of nEPS were proposed. Analyses of irradiation data showed that iEPSs acquired new functional groups, lower molecular weights, and gained significantly (p < 0.05) higher antioxidant and antitumor abilities compared with nEPS. These findings provide a basis for using iEPSs as novel pharmaceutical agents for human therapies.
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15
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Roychowdhury R, Srivastava N, Kumari S, Pinnaka AK, Roy Choudhury A. Isolation of an exopolysaccharide from a novel marine bacterium Neorhizobium urealyticum sp. nov. and its utilization in nanoemulsion formation for encapsulation and stabilization of astaxanthin. Lebensm Wiss Technol 2021. [DOI: 10.1016/j.lwt.2021.112105] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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16
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Lach J, Jęcz P, Strapagiel D, Matera-Witkiewicz A, Stączek P. The Methods of Digging for "Gold" within the Salt: Characterization of Halophilic Prokaryotes and Identification of Their Valuable Biological Products Using Sequencing and Genome Mining Tools. Genes (Basel) 2021; 12:genes12111756. [PMID: 34828362 PMCID: PMC8619533 DOI: 10.3390/genes12111756] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 10/18/2021] [Accepted: 10/30/2021] [Indexed: 02/06/2023] Open
Abstract
Halophiles, the salt-loving organisms, have been investigated for at least a hundred years. They are found in all three domains of life, namely Archaea, Bacteria, and Eukarya, and occur in saline and hypersaline environments worldwide. They are already a valuable source of various biomolecules for biotechnological, pharmaceutical, cosmetological and industrial applications. In the present era of multidrug-resistant bacteria, cancer expansion, and extreme environmental pollution, the demand for new, effective compounds is higher and more urgent than ever before. Thus, the unique metabolism of halophilic microorganisms, their low nutritional requirements and their ability to adapt to harsh conditions (high salinity, high pressure and UV radiation, low oxygen concentration, hydrophobic conditions, extreme temperatures and pH, toxic compounds and heavy metals) make them promising candidates as a fruitful source of bioactive compounds. The main aim of this review is to highlight the nucleic acid sequencing experimental strategies used in halophile studies in concert with the presentation of recent examples of bioproducts and functions discovered in silico in the halophile's genomes. We point out methodological gaps and solutions based on in silico methods that are helpful in the identification of valuable bioproducts synthesized by halophiles. We also show the potential of an increasing number of publicly available genomic and metagenomic data for halophilic organisms that can be analysed to identify such new bioproducts and their producers.
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Affiliation(s)
- Jakub Lach
- Department of Molecular Microbiology, Faculty of Biology and Environmental Protection, University of Lodz, 93-338 Lodz, Poland; (P.J.); (P.S.)
- Biobank Lab, Department of Molecular Biophysics, Faculty of Environmental Protection, University of Lodz, 93-338 Lodz, Poland;
- Correspondence:
| | - Paulina Jęcz
- Department of Molecular Microbiology, Faculty of Biology and Environmental Protection, University of Lodz, 93-338 Lodz, Poland; (P.J.); (P.S.)
| | - Dominik Strapagiel
- Biobank Lab, Department of Molecular Biophysics, Faculty of Environmental Protection, University of Lodz, 93-338 Lodz, Poland;
| | - Agnieszka Matera-Witkiewicz
- Screening Laboratory of Biological Activity Tests and Collection of Biological Material, Faculty of Pharmacy, Wroclaw Medical University, 50-368 Wroclaw, Poland;
| | - Paweł Stączek
- Department of Molecular Microbiology, Faculty of Biology and Environmental Protection, University of Lodz, 93-338 Lodz, Poland; (P.J.); (P.S.)
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17
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Banerjee A, Sarkar S, Govil T, González-Faune P, Cabrera-Barjas G, Bandopadhyay R, Salem DR, Sani RK. Extremophilic Exopolysaccharides: Biotechnologies and Wastewater Remediation. Front Microbiol 2021; 12:721365. [PMID: 34489911 PMCID: PMC8417407 DOI: 10.3389/fmicb.2021.721365] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2021] [Accepted: 07/26/2021] [Indexed: 01/18/2023] Open
Abstract
Various microorganisms thrive under extreme environments, like hot springs, hydrothermal vents, deep marine ecosystems, hyperacid lakes, acid mine drainage, high UV exposure, and more. To survive against the deleterious effect of these extreme circumstances, they form a network of biofilm where exopolysaccharides (EPSs) comprise a substantial part. The EPSs are often polyanionic due to different functional groups in their structural backbone, including uronic acids, sulfated units, and phosphate groups. Altogether, these chemical groups provide EPSs with a negative charge allowing them to (a) act as ligands toward dissolved cations as well as trace, and toxic metals; (b) be tolerant to the presence of salts, surfactants, and alpha-hydroxyl acids; and (c) interface the solubilization of hydrocarbons. Owing to their unique structural and functional characteristics, EPSs are anticipated to be utilized industrially to remediation of metals, crude oil, and hydrocarbons from contaminated wastewaters, mines, and oil spills. The biotechnological advantages of extremophilic EPSs are more diverse than traditional biopolymers. The present review aims at discussing the mechanisms and strategies for using EPSs from extremophiles in industries and environment bioremediation. Additionally, the potential of EPSs as fascinating biomaterials to mediate biogenic nanoparticles synthesis and treat multicomponent water contaminants is discussed.
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Affiliation(s)
- Aparna Banerjee
- Centro de investigación en Estudios Avanzados del Maule (CIEAM), Vicerrectoría de Investigación Y Posgrado, Universidad Católica del Maule, Talca, Chile
- Centro de Biotecnología de los Recursos Naturales (CENBio), Facultad de Ciencias Agrarias Y Forestales, Universidad Católica del Maule, Talca, Chile
| | - Shrabana Sarkar
- Department of Botany, UGC-Center of Advanced Study, The University of Burdwan, Golapbag, Burdwan, India
| | - Tanvi Govil
- Department of Chemical and Biological Engineering, South Dakota Mines, Rapid City, SD, United States
- Composite and Nanocomposite Advanced Manufacturing – Biomaterials Center, Rapid City, SD, United States
| | - Patricio González-Faune
- Escuela Ingeniería en Biotecnología, Facultad de Ciencias Agrarias Y Forestales, Universidad Católica del Maule, Talca, Chile
| | | | - Rajib Bandopadhyay
- Department of Botany, UGC-Center of Advanced Study, The University of Burdwan, Golapbag, Burdwan, India
| | - David R. Salem
- Department of Botany, UGC-Center of Advanced Study, The University of Burdwan, Golapbag, Burdwan, India
- Department of Chemical and Biological Engineering, South Dakota Mines, Rapid City, SD, United States
- Department of Materials and Metallurgical Engineering, South Dakota Mines, Rapid City, SD, United States
| | - Rajesh K. Sani
- Department of Botany, UGC-Center of Advanced Study, The University of Burdwan, Golapbag, Burdwan, India
- Department of Chemical and Biological Engineering, South Dakota Mines, Rapid City, SD, United States
- BuGReMeDEE Consortium, South Dakota School of Mines and Technology, Rapid City, SD, United States
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18
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Environmentally friendly antibiofilm strategy based on cationized phytoglycogen nanoparticles. Colloids Surf B Biointerfaces 2021; 207:111975. [PMID: 34371317 DOI: 10.1016/j.colsurfb.2021.111975] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 07/10/2021] [Accepted: 07/12/2021] [Indexed: 11/23/2022]
Abstract
Biofilm tolerance to antibiotics has led to the search for new alternatives in treating biofilms. The use of metallic nanoparticles has been a suggested strategy against biofilms, but their potential environmental toxicity and high cost of synthesizing have limited their applications. In this study, we investigate the potential of polysaccharidic phytoglycogen nanoparticles extracted from corn, in treating cyanobacterial biofilms, which are the source of toxins and pollution in aquatic environments. Our results revealed that the surface of cyanobacterial cells was dominated by the negatively charged functional groups such as carboxylic and phosphoric groups. The native phytoglycogen (PhX) nanoparticles were dominated with non-charged groups, such as hydroxyl groups, and the cationized phytoglycogen (PhXC) nanoparticles showed positively charged surfaces due to the presence of quaternary ammonium cations. Our results indicated that, as opposed to PhX, PhXC strongly inhibited biofilm formation when dispersed in the culture medium. PhXC also eradicated the already grown cyanobacterial biofilms. The antibiofilm properties of PhXC were attributed to its strong electrostatic interactions with the cyanobacterial cells, which could inhibit cell/cell and cell/substrate interactions and nutrient exchange with the media. This class of antibacterial polysaccharide nanoparticles may provide a novel cost-effective and environment-friendly strategy for treating biofilm formation by a broad spectrum of bacteria.
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Halophilic Prokaryotes in Urmia Salt Lake, a Hypersaline Environment in Iran. Curr Microbiol 2021; 78:3230-3238. [PMID: 34216240 DOI: 10.1007/s00284-021-02583-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Accepted: 04/14/2021] [Indexed: 10/20/2022]
Abstract
In this study, fluorescence in situ hybridization (FISH) and PCR-amplified fragments of the 16SrDNA gene were used to determine prokaryotes diversity in Urmia Salt Lake. Prokaryote cell population in Urmia lake range from 3.1 ± 0.3 × 106, 2 ± 0.2 × 108, 4 ± 0.3 × 108, and 1.8 ± 0.2 × 108 cells ml-1 for water, soil, sediment, and salt samples by DAPI (4́, 6-diamidino-2-phenylindole) direct count, respectively. The proportion of bacteria and archaea in the samples determinable by FISH ranged between 36.1 and 55% and 48.5 and 55.5%, respectively. According to the DGGE method, some bands were selected and separated from the gel, then amplified and sequenced. The results of sequences were related to two phyla Proteobacteria (16.6%) and Bacteroidetes (83.3%), which belonged to four genera Salinibacter, Mangroviflexus, Pseudomonas, and Cesiribacter, and the archaeal sequences were related to Euryarchaeota phyla and three genera Halonotius, Haloquadratum, and Halorubrum. According to our results, it seems that prokaryotic populations in this hypersaline environment are more diverse than expected, and bacteria are so abundant and diverse and form the metabolically active part of the microbial population inhabiting this extreme environment. Molecular dependent and independent approaches revealed a different aspect of this environment microbiota.
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20
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Aavani F, Biazar E, Heshmatipour Z, Arabameri N, Kamalvand M, Nazbar A. Applications of bacteria and their derived biomaterials for repair and tissue regeneration. Regen Med 2021; 16:581-605. [PMID: 34030458 DOI: 10.2217/rme-2020-0116] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Microorganisms such as bacteria and their derived biopolymers can be used in biomaterials and tissue regeneration. Various methods have been applied to regenerate damaged tissues, but using probiotics and biomaterials derived from bacteria with improved economic-production efficiency and highly applicable properties can be a new solution in tissue regeneration. Bacteria can synthesize numerous types of biopolymers. These biopolymers possess many desirable properties such as biocompatibility and biodegradability, making them good candidates for tissue regeneration. Here, we reviewed different types of bacterial-derived biopolymers and highlight their applications for tissue regeneration.
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Affiliation(s)
- Farzaneh Aavani
- Biomedical Engineering Faculty, Amirkabir University of Technology (Tehran Polytechnic), 15916-34311 Tehran, Iran
| | - Esmaeil Biazar
- Department of Biomedical Engineering, Tissue Engineering Group, Tonekabon Branch, Islamic Azad University, 46841-61167 Tonekabon, Iran
| | - Zoheir Heshmatipour
- Department of Microbiology, Tonekabon Branch, Islamic Azad University, 46841-61167 Tonekabon, Iran
| | - Nasibeh Arabameri
- Department of Microbiology, Tonekabon Branch, Islamic Azad University, 46841-61167 Tonekabon, Iran
| | - Mahshad Kamalvand
- Department of Biomedical Engineering, Tissue Engineering Group, Tonekabon Branch, Islamic Azad University, 46841-61167 Tonekabon, Iran
| | - Abolfazl Nazbar
- National Cell Bank, Pasteur Institute of Iran, 13169-43551 Tehran, Iran
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21
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Nikolova C, Gutierrez T. Biosurfactants and Their Applications in the Oil and Gas Industry: Current State of Knowledge and Future Perspectives. Front Bioeng Biotechnol 2021; 9:626639. [PMID: 33659240 PMCID: PMC7917263 DOI: 10.3389/fbioe.2021.626639] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Accepted: 01/13/2021] [Indexed: 11/13/2022] Open
Abstract
Surfactants are a group of amphiphilic chemical compounds (i.e., having both hydrophobic and hydrophilic domains) that form an indispensable component in almost every sector of modern industry. Their significance is evidenced from the enormous volumes that are used and wide diversity of applications they are used in, ranging from food and beverage, agriculture, public health, healthcare/medicine, textiles, and bioremediation. A major drive in recent decades has been toward the discovery of surfactants from biological/natural sources-namely bio-surfactants-as most surfactants that are used today for industrial applications are synthetically-manufactured via organo-chemical synthesis using petrochemicals as precursors. This is problematic, not only because they are derived from non-renewable resources, but also because of their environmental incompatibility and potential toxicological effects to humans and other organisms. This is timely as one of today's key challenges is to reduce our reliance on fossil fuels (oil, coal, gas) and to move toward using renewable and sustainable sources. Considering the enormous genetic diversity that microorganisms possess, they offer considerable promise in producing novel types of biosurfactants for replacing those that are produced from organo-chemical synthesis, and the marine environment offers enormous potential in this respect. In this review, we begin with an overview of the different types of microbial-produced biosurfactants and their applications. The remainder of this review discusses the current state of knowledge and trends in the usage of biosurfactants by the Oil and Gas industry for enhancing oil recovery from exhausted oil fields and as dispersants for combatting oil spills.
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Affiliation(s)
| | - Tony Gutierrez
- School of Engineering and Physical Sciences, Institute of Mechanical, Process and Energy Engineering, Heriot-Watt University, Edinburgh, United Kingdom
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22
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Production and Characterization of Extracellular Polymeric Substances by marine Halomonas sp. NASH isolated from Wadi El-Natroun. JOURNAL OF PURE AND APPLIED MICROBIOLOGY 2020. [DOI: 10.22207/jpam.14.4.51] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Halophilic micro-organisms often synthesize and produce extracellular polysaccharides (EPS), whose physical, chemical properties and material properties vary greatly from each other. The extracellular polysaccharide (EPS) development of Halomonas sp. MN795630 strain type halophilic bacterium (NASH) was investigated and whether biotechnological applications were feasible. After 168 hours of incubation, 4 g/L of EPS was produced and all elements from the medium were completely used during the growth. Sucrose has been identified as the most favorable carbon source for production of EPS and maximum production (6 g/l). Beef extract level was shown to be the best for EPS production among different nitrogen sources. Optimum production of EPS (10 g/L) were achieved by supplementing the medium with 4M NaCl, pH adjusted at 9 and the medium was inoculated with 7% initial inoculum. The purified EPS were characterized chemically. Fourier transform infrared (FTIR) spectrophotometer was observed in several functional groups. EPS also demonstrated an significant inhibitor of Candida albicans ATCC 10231 and Pseudomonas aeruginosa ATCC 9027 (20.4 and 14.7 mm), respectively. EPS show satisfactory results when applied as anti-oxidant, anti-inflammatory and emulsifier.
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23
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Lukhele T, Nyoni H, Mamba BB, Msagati TAM. Unraveling bacterial diversity in oil refinery effluents. Arch Microbiol 2020; 203:1231-1240. [PMID: 33079208 DOI: 10.1007/s00203-020-02062-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2020] [Revised: 09/01/2020] [Accepted: 09/30/2020] [Indexed: 11/30/2022]
Abstract
Oil refinery effluents are among stressful environments, and they are characterized by alkaline pH, high concentrations of dissolved solids, electrical conductivity, and metals (mainly Fe, Al, B, Sr, Mn, Cu, Ni). In this study, bacterial diversity in these habitats was inferred from full-length 16S rRNA gene sequences obtained from the PacBio® sequencing platform. The results have shown low bacterial diversity in both raw and treated effluents, with sequences representing only two phyla: Firmicutes and Proteobacteria. Sequences from the raw effluents represent four major genera: Bacillus, Wenzhouxiangella, Rhodabaculum, and Halomonas. Whilst bacterial communities from the treated effluents are relatively more diverse as sequences represent five dominant genera: Pseudoxanthomonas, Brevundimonas, Pseudomonas, Rhodobaculum and Rhizobium. Most of the genera represented in the dataset are halophilic or halotolerant microbes known to have the competency to catabolize a broad spectrum of organic and inorganic pollutants. Hypothetically, these bacteria may be relevant for biotechnological and industrial applications, particularly for the remediation of saline industrial wastes.
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Affiliation(s)
- Thabile Lukhele
- Institute of Nanotechnology and Water Sustainability (iNanoWS), College of Science Engineering and Technology, University of South Africa, Florida Science Campus, Johannesburg, South Africa
| | - Hlengilizwe Nyoni
- Institute of Nanotechnology and Water Sustainability (iNanoWS), College of Science Engineering and Technology, University of South Africa, Florida Science Campus, Johannesburg, South Africa
| | - Bhekie Brilliance Mamba
- Institute of Nanotechnology and Water Sustainability (iNanoWS), College of Science Engineering and Technology, University of South Africa, Florida Science Campus, Johannesburg, South Africa.,State Key Laboratory of Separation and Membranes, Membrane Processes, National Center for International Joint Research on Membrane Science and Technology, Tianjin, 300387, People's Republic of China
| | - Titus Alfred Makudali Msagati
- Institute of Nanotechnology and Water Sustainability (iNanoWS), College of Science Engineering and Technology, University of South Africa, Florida Science Campus, Johannesburg, South Africa. .,School of Life Sciences and Bio-Engineering, The Nelson Mandela African Institution of Science and Technology, Tengeru, P O Box 447, Arusha, United Republic of Tanzania.
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24
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Joulak I, Finore I, Poli A, Abid Y, Bkhairia I, Nicolaus B, Di Donato P, Dal Poggetto G, Gharsallaoui A, Attia H, Azabou S. Hetero-exopolysaccharide from the extremely halophilic Halomonas smyrnensis K2: production, characterization and functional properties in vitro. 3 Biotech 2020; 10:395. [PMID: 32832343 PMCID: PMC7431504 DOI: 10.1007/s13205-020-02356-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Accepted: 07/23/2020] [Indexed: 12/27/2022] Open
Abstract
In this study, we firstly reported the production and the structural characterization of a novel hetero-exopolysaccharide namely EPS-K2 from the extremely halophilc Halomonas smyrnensis K2. Results revealed that EPS-K2 was mainly composed of three monosaccharides including mannose (66.69%), glucose (19.54%) and galactose (13.77%). EPS-K2 showed high thermostability with a degradation temperature around 260 °C, which could make it a suitable candidate for application in thermal processes. Moreover, EPS-K2 showed attractive functional properties. In fact, it exhibited potent antioxidant activity in a dose-dependent manner as assessed in analyses of 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging, iron chelating and DNA protection ability. Furthermore, EPS-K2 showed strong adhesion inhibition activity against Enterococcus faecalis (75.52 ± 3.35%) and Escherichia coli (61.95 ± 2.48%) at 1 g/l concentration, as well as a high biofilm disruption activity especially against E. coli (70.73 ± 2.78%), at 2 g/l concentration. According to its biotechnological properties, EPS-K2 could be exploited as functional ingredient in food, biomedicine, and pharmaceutical industries.
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Affiliation(s)
- Ichrak Joulak
- Laboratoire Analyse, Valorisation et Sécurité des Aliments, Université de Sfax, ENIS, Sfax, 3038 Tunisia
| | - Ilaria Finore
- Consiglio Nazionale delle Ricerche (C.N.R.), Institute of Biomolecular Chemistry (ICB), via Campi Flegrei 34, 80078 Pozzuoli, Italy
| | - Annarita Poli
- Consiglio Nazionale delle Ricerche (C.N.R.), Institute of Biomolecular Chemistry (ICB), via Campi Flegrei 34, 80078 Pozzuoli, Italy
| | - Yousra Abid
- Laboratoire Analyse, Valorisation et Sécurité des Aliments, Université de Sfax, ENIS, Sfax, 3038 Tunisia
| | - Intidhar Bkhairia
- Laboratoire de Génie Enzymatique et de Microbiologie, Université de Sfax, Ecole Nationale d’Ingénieurs de Sfax, B.P. 1173-3038 Sfax, Tunisia
| | - Barbara Nicolaus
- Consiglio Nazionale delle Ricerche (C.N.R.), Institute of Biomolecular Chemistry (ICB), via Campi Flegrei 34, 80078 Pozzuoli, Italy
| | - Paola Di Donato
- Consiglio Nazionale delle Ricerche (C.N.R.), Institute of Biomolecular Chemistry (ICB), via Campi Flegrei 34, 80078 Pozzuoli, Italy
- Department of Science and Technology, Parthenope University of Naples, Centro Direzionale-Isola C4, 80143 Naples, Italy
| | - Giovanni Dal Poggetto
- Consiglio Nazionale delle Ricerche (C.N.R.), Institute for Polymers, Composites and Biomaterials (IPCB), via Campi Flegrei 34, 80078 Pozzuoli, Italy
| | - Adem Gharsallaoui
- University of Lyon, Université Claude Bernard Lyon 1, CNRS, LAGEPP UMR 5007, 43 Bd 11 Novembre 1918, 69622 Villeurbanne, France
| | - Hamadi Attia
- Laboratoire Analyse, Valorisation et Sécurité des Aliments, Université de Sfax, ENIS, Sfax, 3038 Tunisia
| | - Samia Azabou
- Laboratoire Analyse, Valorisation et Sécurité des Aliments, Université de Sfax, ENIS, Sfax, 3038 Tunisia
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25
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Structural characterization and functional properties of novel exopolysaccharide from the extremely halotolerant Halomonas elongata S6. Int J Biol Macromol 2020; 164:95-104. [PMID: 32673722 DOI: 10.1016/j.ijbiomac.2020.07.088] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2020] [Revised: 06/21/2020] [Accepted: 07/09/2020] [Indexed: 12/19/2022]
Abstract
Production of extracellular polysaccharides by halophilic Archaea and Bacteria has been widely reported and the members of the genus Halomonas have been identified as the most potential producers. In the present work, a novel exopolysaccharide (EPS-S6) produced by the extremely halotolerant newly isolated Halomonas elongata strain S6, was characterized. According to the HPAE-PAD results, EPS-S6 was mainly composed of glucosamine, mannose, rhamnose and glucose (1:0.9:0.7:0.3). EPS-S6 was highly negatively charged and its molecular weight was about 270 kDa. Studies on its functional properties showed that EPS-S6 had several potential features. It has noticeable antioxidant activities on 2,2-diphenyl-1-picrylhydrazyl (DPPH•) inhibition and DNA protection, good ability to inhibit and to disrupt pathogenic biofilms, excellent flocculation of kaolin suspension and interesting emulsifying properties at acidic, neutral and basic pH. Therefore, EPS-S6 could have potential biotechnological concern in several fields such as in food, cosmetic and environmental industries.
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26
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Gan L, Li X, Wang H, Peng B, Tian Y. Structural characterization and functional evaluation of a novel exopolysaccharide from the moderate halophile Gracilibacillus sp. SCU50. Int J Biol Macromol 2020; 154:1140-1148. [DOI: 10.1016/j.ijbiomac.2019.11.143] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2019] [Revised: 11/06/2019] [Accepted: 11/18/2019] [Indexed: 12/20/2022]
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Asgher M, Urooj Y, Qamar SA, Khalid N. Improved exopolysaccharide production from Bacillus licheniformis MS3: Optimization and structural/functional characterization. Int J Biol Macromol 2020; 151:984-992. [DOI: 10.1016/j.ijbiomac.2019.11.094] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2019] [Revised: 10/28/2019] [Accepted: 11/10/2019] [Indexed: 10/25/2022]
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28
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Rajan R, Chunduri AR, Lima A, Mamillapalli A. 16S rRNA sequence data of Bombyx mori gut bacteriome after spermidine supplementation. BMC Res Notes 2020; 13:94. [PMID: 32093782 PMCID: PMC7038597 DOI: 10.1186/s13104-020-04958-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Accepted: 02/17/2020] [Indexed: 12/17/2022] Open
Abstract
OBJECTIVES The silkworm Bombyx mori (B. mori) is an important domesticated lepidopteran model for basic and applied research. They produce silk fibres that have great economic value. The gut microbiome plays an important role in the growth of organisms. Spermidine (Spd) is shown to be important for the growth of all living cells. The effect of spermidine feeding on the gut microbiome of 5th instar B. mori larvae was checked. The B. mori gut samples from control and spermidine fed larvae were subjected to next-generation sequencing analysis to unravel changes in the bacterial community upon spermidine supplementation. DATA DESCRIPTION The changes in gut bacteriota after spermidine feeding is not studied before. B. mori larvae were divided into two groups of 50 worms each and were fed with normal mulberry leaves and mulberry leaves fortified with 50 µM spermidine. The gut tissues were isolated aseptically and total genomic DNA was extracted, 16S rRNA region amplified and sequenced using Illumina platform. The spermidine fed gut samples were shown to have abundance and diversity of the phyla Proteobacteria, Firmicutes, Bacteroidetes, and Actinobacteria.
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Affiliation(s)
- Resma Rajan
- Department of Biotechnology, Institute of Science, GITAM (Deemed to be University), Visakhapatnam, 530 045, India
| | - Alekhya Rani Chunduri
- Department of Biotechnology, Institute of Science, GITAM (Deemed to be University), Visakhapatnam, 530 045, India
| | - Anugata Lima
- Department of Biotechnology, Institute of Science, GITAM (Deemed to be University), Visakhapatnam, 530 045, India
| | - Anitha Mamillapalli
- Department of Biotechnology, Institute of Science, GITAM (Deemed to be University), Visakhapatnam, 530 045, India.
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Extreme environments: a source of biosurfactants for biotechnological applications. Extremophiles 2019; 24:189-206. [PMID: 31823065 DOI: 10.1007/s00792-019-01151-2] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2018] [Accepted: 12/03/2019] [Indexed: 02/07/2023]
Abstract
The surfactant industry moves billions of dollars a year and consists of chemically synthesized molecules usually derived from petroleum. Surfactant is a versatile molecule that is widely used in different industrial areas, with an emphasis on the petroleum, biomedical and detergent industries. Recently, interest in environmentally friendly surfactants that are resistant to extreme conditions has increased because of consumers' appeal for sustainable products and industrial processes that often require these characteristics. With this context, the need arises to search for surfactants produced by microorganisms coming from extreme environments and to mine their unique biotechnological potential. The production of biosurfactants is still incipient and presents challenges regarding economic viability due to the high costs of cultivation, production, recovery and purification. Advances can be made by exploring the extreme biosphere and bioinformatics tools. This review focuses on biosurfactants produced by microorganisms from different extreme environments, presenting a complete overview of what information is available in the literature, including the advances, challenges and future perspectives, as well as showing the possible applications of extreme biosurfactants.
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Gutierrez T, Morris G, Ellis D, Mulloy B, Aitken MD. Production and characterisation of a marine Halomonas surface-active exopolymer. Appl Microbiol Biotechnol 2019; 104:1063-1076. [PMID: 31813048 PMCID: PMC6962145 DOI: 10.1007/s00253-019-10270-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Revised: 11/13/2019] [Accepted: 11/22/2019] [Indexed: 11/26/2022]
Abstract
During screening for novel emulsifiers and surfactants, a marine gammaproteobacterium, Halomonas sp. MCTG39a, was isolated and selected for its production of an extracellular emulsifying agent, P39a. This polymer was produced by the new isolate during growth in a modified Zobell’s 2216 medium amended with 1% glucose, and was extractable by cold ethanol precipitation. Chemical, chromatographic and nuclear magnetic resonance spectroscopic analysis confirmed P39a to be a high-molecular-weight (~ 261,000 g/mol) glycoprotein composed of carbohydrate (17.2%) and protein (36.4%). The polymer exhibited high emulsifying activities against a range of oil substrates that included straight-chain aliphatics, mono- and alkyl- aromatics and cycloparaffins. In general, higher emulsification values were measured under low (0.1 M PBS) compared to high (synthetic seawater) ionic strength conditions, indicating that low ionic strength is more favourable for emulsification by the P39a polymer. However, as observed with other bacterial emulsifying agents, the polymer emulsified some aromatic hydrocarbon species, as well as refined and crude oils, more effectively under high ionic strength conditions, which we posit could be due to steric adsorption to these substrates as may be conferred by the protein fraction of the polymer. Furthermore, the polymer effected a positive influence on the degradation of phenanthrene by other marine bacteria, such as the specialist PAH-degrader Polycyclovorans algicola. Collectively, based on the ability of this Halomonas high-molecular-weight glycoprotein to emulsify a range of pure hydrocarbon species, as well as refined and crude oils, it shows promise for the bioremediation of contaminated sites.
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Affiliation(s)
- Tony Gutierrez
- Institute of Mechanical, Process and Energy Engineering (IMPEE), School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, UK. .,Department of Environmental Sciences and Engineering, Gillings School of Global Public Health,, University of North Carolina, Chapel Hill, NC, USA.
| | - Gordon Morris
- Department of Chemical Sciences, School of Applied Sciences, University of Huddersfield, Huddersfield, UK
| | - Dave Ellis
- Institute of Chemical Sciences (ICS), School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, UK
| | - Barbara Mulloy
- Institute of Pharmaceutical Science, King's College London, London, UK
| | - Michael D Aitken
- Department of Environmental Sciences and Engineering, Gillings School of Global Public Health,, University of North Carolina, Chapel Hill, NC, USA
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Joulak I, Finore I, Nicolaus B, Leone L, Moriello AS, Attia H, Poli A, Azabou S. Evaluation of the production of exopolysaccharides by newly isolated Halomonas strains from Tunisian hypersaline environments. Int J Biol Macromol 2019; 138:658-666. [DOI: 10.1016/j.ijbiomac.2019.07.128] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2019] [Revised: 07/17/2019] [Accepted: 07/21/2019] [Indexed: 01/01/2023]
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Sengupta D, Datta S, Biswas D. Exploring two contrasting surface‐active exopolysaccharides from a single strain of
Ochrobactrum
utilizing different hydrocarbon substrates. J Basic Microbiol 2019; 59:820-833. [DOI: 10.1002/jobm.201900080] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Revised: 04/30/2019] [Accepted: 05/21/2019] [Indexed: 12/26/2022]
Affiliation(s)
- Dipanjan Sengupta
- Department of Chemical Technology, Rajabazar Science College University of Calcutta Kolkata India
| | - Sriparna Datta
- Department of Chemical Technology, Rajabazar Science College University of Calcutta Kolkata India
| | - Dipa Biswas
- Department of Chemical Technology, Rajabazar Science College University of Calcutta Kolkata India
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Torres M, Dessaux Y, Llamas I. Saline Environments as a Source of Potential Quorum Sensing Disruptors to Control Bacterial Infections: A Review. Mar Drugs 2019; 17:md17030191. [PMID: 30934619 PMCID: PMC6471967 DOI: 10.3390/md17030191] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Revised: 03/19/2019] [Accepted: 03/20/2019] [Indexed: 12/12/2022] Open
Abstract
Saline environments, such as marine and hypersaline habitats, are widely distributed around the world. They include sea waters, saline lakes, solar salterns, or hypersaline soils. The bacteria that live in these habitats produce and develop unique bioactive molecules and physiological pathways to cope with the stress conditions generated by these environments. They have been described to produce compounds with properties that differ from those found in non-saline habitats. In the last decades, the ability to disrupt quorum-sensing (QS) intercellular communication systems has been identified in many marine organisms, including bacteria. The two main mechanisms of QS interference, i.e., quorum sensing inhibition (QSI) and quorum quenching (QQ), appear to be a more frequent phenomenon in marine aquatic environments than in soils. However, data concerning bacteria from hypersaline habitats is scarce. Salt-tolerant QSI compounds and QQ enzymes may be of interest to interfere with QS-regulated bacterial functions, including virulence, in sectors such as aquaculture or agriculture where salinity is a serious environmental issue. This review provides a global overview of the main works related to QS interruption in saline environments as well as the derived biotechnological applications.
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Affiliation(s)
- Marta Torres
- Department of Microbiology, Faculty of Pharmacy, University of Granada, 18071 Granada, Spain.
- Institute of Biotechnology, Biomedical Research Center (CIBM), University of Granada, 18100 Granada, Spain.
- Institute for Integrative Biology of the Cell (I2BC), CEA/CNRS/University Paris-Sud, University Paris-Saclay, 91198 Gif-sur-Yvette, France.
| | - Yves Dessaux
- Institute for Integrative Biology of the Cell (I2BC), CEA/CNRS/University Paris-Sud, University Paris-Saclay, 91198 Gif-sur-Yvette, France.
| | - Inmaculada Llamas
- Department of Microbiology, Faculty of Pharmacy, University of Granada, 18071 Granada, Spain.
- Institute of Biotechnology, Biomedical Research Center (CIBM), University of Granada, 18100 Granada, Spain.
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Sahana TG, Rekha PD. A bioactive exopolysaccharide from marine bacteria Alteromonas sp. PRIM-28 and its role in cell proliferation and wound healing in vitro. Int J Biol Macromol 2019; 131:10-18. [PMID: 30851325 DOI: 10.1016/j.ijbiomac.2019.03.048] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Revised: 03/06/2019] [Accepted: 03/06/2019] [Indexed: 02/07/2023]
Abstract
Marine bacteria secrete exopolysaccharides (EPS) with unique structural and functional properties and serve as a source of newer bioactive biopolymers. This study reports an EPS produced by a marine bacterium identified as Alteromonas sp. PRIM-28 for its bioactivities. The EPS was characterised using standard methods and tested for its bioactivities using in vitro models. EPS-A28 is an anionic heteropolysaccharide with a molecular weight of 780 kDa and exists as triple helical structure in aqueous solution. Monosaccharide composition is mannuronic acid, glucose and N-acetyl glucosamine repeating units in the ratio 1:3.67:0.93. The FT-IR spectra showed the presence of sulphate, phosphate and uronic acid residues. The thermal analysis showed partial degradation of the EPS-A28 at 190 °C and 40% of residues were stable up to 800 °C. It showed biocompatibility and induced proliferation and migration of dermal fibroblasts (HDF) and keratinocytes. EPS-A28 could increase the S-phase of cell cycle. The proliferative property of the EPS-A28 was established by the increased expression of fibroblast proliferation marker (Ki-67) also its capability of binding to cell surface. It also induced nitric oxide and arginase synthesis in macrophages. These findings suggest that EPS-A28 can be potentially used as a multifunctional bioactive polymer in wound care.
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Affiliation(s)
- T G Sahana
- Yenepoya Research Centre, Yenepoya University, University Road, Deralakatte, Mangalore, India.
| | - P D Rekha
- Yenepoya Research Centre, Yenepoya University, University Road, Deralakatte, Mangalore, India.
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Exopolysaccharides production by Lactobacillus acidophilus LA5 and Bifidobacterium animalis subsp. lactis BB12: Optimization of fermentation variables and characterization of structure and bioactivities. Int J Biol Macromol 2019; 123:752-765. [DOI: 10.1016/j.ijbiomac.2018.11.084] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Revised: 10/05/2018] [Accepted: 11/12/2018] [Indexed: 01/05/2023]
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Extremophilic exopolysaccharides: A review and new perspectives on engineering strategies and applications. Carbohydr Polym 2019; 205:8-26. [DOI: 10.1016/j.carbpol.2018.10.011] [Citation(s) in RCA: 70] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Revised: 09/20/2018] [Accepted: 10/04/2018] [Indexed: 12/16/2022]
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37
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Hamidi M, Mirzaei R, Delattre C, Khanaki K, Pierre G, Gardarin C, Petit E, Karimitabar F, Faezi S. Characterization of a new exopolysaccharide produced by Halorubrum sp. TBZ112 and evaluation of its anti-proliferative effect on gastric cancer cells. 3 Biotech 2019; 9:1. [PMID: 30555767 DOI: 10.1007/s13205-018-1515-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2018] [Accepted: 11/13/2018] [Indexed: 11/28/2022] Open
Abstract
In the present study, we aimed to extract, purify, analyze monosaccharide composition of exopolysaccharide (EPS) produced by Halorubrum sp. TBZ112 (KCTC 4203 and IBRC-M 10773) and also to evaluate its possible antiproliferative activity against human gastric cancer (MKN-45) cell line and its biocompatibility effect on normal cells using human dermal fibroblast (HDF) cell line. Average molecular weight and monosaccharide composition were determined by high-pressure size exclusion chromatography (HPSEC) with multi-angle laser light scattering (MALLS) and high-pressure anion exchange chromatography (HPAEC), respectively. Fourier transform infrared (FTIR) spectroscopy was used for the partial characterization of the EPS. The EPS effect on the cell proliferation and viability of MKN-45 and HDF cells was assessed using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay and trypan blue dye exclusion, respectively. Strain TBZ112 excreted 480 mg.l-1 of the EPS under optimal growth conditions. The EPS had a molecular weight of 5.052 kDa and was a heteropolysaccharide containing ten moieties mainly composed of mannose (19.95%), glucosamine (15.55%), galacturonic acid (15.43%), arabinose (12.24%), and glucuronic acid (12.05%). No significant difference of the EPS treatments on the proliferation activity of MKN-45 and HDF cells were observed (P > 0.05). For the first time, the EPS from Halorubrum sp. TBZ112, an extremely halophilic archaeon related to Halorubrum genus, was isolated and chemically characterized. The EPS from Halorubrum sp. TBZ112 possesses a relatively low molecular weight and might be applied as a biocompatible compound. More investigations are needed to determine other biological activities of the EPS along with further details of its chemical structure.
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Affiliation(s)
- Masoud Hamidi
- 1Medical Biotechnology Research Center, School of Paramedicine, Guilan University of Medical Sciences, Rasht, Iran
| | - Rasool Mirzaei
- 1Medical Biotechnology Research Center, School of Paramedicine, Guilan University of Medical Sciences, Rasht, Iran
| | - Cédric Delattre
- 2Institut Pascal UMR CNRS 6602, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France
| | - Korosh Khanaki
- 1Medical Biotechnology Research Center, School of Paramedicine, Guilan University of Medical Sciences, Rasht, Iran
| | - Guillaume Pierre
- 2Institut Pascal UMR CNRS 6602, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France
| | - Christine Gardarin
- 2Institut Pascal UMR CNRS 6602, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France
| | - Emmanuel Petit
- 3EA3900 BIOPI, Université de Picardie Jules Verne, Avenue des facultés, Le Bailly, 80025 Amiens cedex, France
| | - Fatemeh Karimitabar
- 1Medical Biotechnology Research Center, School of Paramedicine, Guilan University of Medical Sciences, Rasht, Iran
| | - Sobhan Faezi
- 1Medical Biotechnology Research Center, School of Paramedicine, Guilan University of Medical Sciences, Rasht, Iran
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Fella-Temzi S, Yalaoui-Guellal D, Rodriguez-Carvajal MA, Belhadi D, Madani K, Kaci Y. Removal of lead by exopolysaccharides from Paenibacillus peoriae strainTS7 isolated from rhizosphere of durum wheat. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2018. [DOI: 10.1016/j.bcab.2018.09.016] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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39
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Isolation and characterization of halophilic bacteria producing exopolymers with emulsifying and antioxidant activities. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2018. [DOI: 10.1016/j.bcab.2018.10.015] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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40
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41
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Szewczuk-Karpisz K, Wiśniewska M. Flocculation efficiency of the Sinorhizobium meliloti 1021 exopolysaccharide relative to mineral oxide suspensions – A preliminary study for wastewater treatment. Sep Purif Technol 2018. [DOI: 10.1016/j.seppur.2018.02.028] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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42
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Chatterjee S, Mukhopadhyay SK, Gauri SS, Dey S. Sphingobactan, a new α-mannan exopolysaccharide from Arctic Sphingobacterium sp. IITKGP-BTPF3 capable of biological response modification. Int Immunopharmacol 2018; 60:84-95. [DOI: 10.1016/j.intimp.2018.04.039] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2017] [Revised: 04/21/2018] [Accepted: 04/23/2018] [Indexed: 01/17/2023]
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43
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Abid Y, Joulak I, Ben Amara C, Casillo A, Attia H, Gharsallaoui A, Azabou S. Study of interactions between anionic exopolysaccharides produced by newly isolated probiotic bacteria and sodium caseinate. Colloids Surf B Biointerfaces 2018; 167:516-523. [DOI: 10.1016/j.colsurfb.2018.04.046] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2018] [Revised: 04/07/2018] [Accepted: 04/24/2018] [Indexed: 01/26/2023]
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Yik LY, Chin GJWL, Budiman C, Joseph CG, Musta B, Rodrigues KF. Adaptive Strategies of Bacillus thuringiensis Isolated from Acid Mine Drainage Site in Sabah, Malaysia. Indian J Microbiol 2018; 58:165-173. [PMID: 29651175 DOI: 10.1007/s12088-017-0701-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 12/26/2017] [Indexed: 11/29/2022] Open
Abstract
The adaptive process in bacteria is driven by specific genetic elements which regulate phenotypic characteristics such as tolerance to high metal ion concentrations and the secretion of protective biofilms. Extreme environments such as those associated with heavy metal pollution and extremes of acidity offer opportunities to study the adaptive mechanisms of microorganisms. This study focused on the genome analysis of Bacillus thuringiensis (Bt MCMY1), a gram positive rod shaped bacterium isolated from an acid mine drainage site in Sabah, Malaysia by using a combination of Single Molecule Real Time DNA Sequencing, Scanning Electron Microscopy (SEM) and Fourier Transform Infrared Spectroscopy (FTIR). The genome size of Bt MCMY1 was determined to be 5,458,152 bases which was encoded on a single chromosome. Analysis of the genome revealed genes associated with resistance to Copper, Mercury, Arsenic, Cobalt, Zinc, Cadmium and Aluminum. Evidence from SEM and FTIR indicated that the bacterial colonies form distinct films which bear the signature of polyhydroxyalkanoates (PHA) and this finding was supported by the genome data indicating the presence of a genetic pathway associated with the biosynthesis of PHAs. This is the first report of a Bacillus sp. isolated from an acid mine drainage site in Sabah, Malaysia and the genome sequence will provide insights into the manner in which B. thuringiensis adapts to acid mine drainage.
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Affiliation(s)
- Low Yi Yik
- 1Biotechnology Research Institute, Universiti Malaysia Sabah, Kota Kinabalu, Malaysia
| | | | - Cahyo Budiman
- 1Biotechnology Research Institute, Universiti Malaysia Sabah, Kota Kinabalu, Malaysia
| | - Collin Glenn Joseph
- 2Faculty of Science and Natural Resources, Universiti Malaysia Sabah, Kota Kinabalu, Malaysia
| | - Baba Musta
- 2Faculty of Science and Natural Resources, Universiti Malaysia Sabah, Kota Kinabalu, Malaysia
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Radchenkova N, Boyadzhieva I, Atanasova N, Poli A, Finore I, Di Donato P, Nicolaus B, Panchev I, Kuncheva M, Kambourova M. Extracellular polymer substance synthesized by a halophilic bacterium Chromohalobacter canadensis 28. Appl Microbiol Biotechnol 2018; 102:4937-4949. [DOI: 10.1007/s00253-018-8901-0] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Revised: 02/26/2018] [Accepted: 02/28/2018] [Indexed: 12/27/2022]
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Das KR, Kowshik M, Praveen Kumar MK, Kerkar S, Shyama SK, Mishra S. Native hypersaline sulphate reducing bacteria contributes to iron nanoparticle formation in saltpan sediment: A concern for aquaculture. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2018; 206:556-564. [PMID: 29127928 DOI: 10.1016/j.jenvman.2017.10.078] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Revised: 10/31/2017] [Accepted: 10/31/2017] [Indexed: 06/07/2023]
Abstract
A hypersaline dissimilatory sulphate reducing bacterium, strain LS4, isolated from the sediments of Ribander saltpan, Goa, India was found to produce (Fe2O3) maghemite nanoparticles. The presence of maghemite nanoparticles was also detected in the same sediment. Strain LS4 was isolated anaerobically on modified Hatchikian's media at 300 psu, growing optimally at 30 °C, 150 psu salinity and pH 7.8. Based on biochemical characteristics and 16S rRNA sequence analysis, the strain LS4 belongs to genus Desulfovibrio. This isolate synthesized iron oxide nanoparticles in vitro when challenged with FeCl3 & FeSO4 in the growth medium. The biological nanoparticles were characterized to be Fe2O3 nanoparticle of 19 nm size by X-ray diffraction, transmission electron microscopy, fourier transform infrared spectroscopy, scanning electron microscopy and energy-dispersive x-ray spectroscopy. Maghemite nanoparticles (5.63 mg g-1) were isolated from the saltpan sediment by magnetic separation which showed similar characteristic features to the Fe2O3 nanoparticle produced by strain LS4 with an average size of 18 nm. Traditionally Goan saltpans were used for aquaculture during the non-salt making season, thus effects of these nanoparticles on Zebra fish embryo development were checked, which resulted in developmental abnormalities and DNA damage in a dose dependent manner. With the increasing nanoparticle concentration (0.1 mg.L-1 to100 mg.L-1), the mortality rate increased with a decrease in the hatching rate (93.05 ± 2.4 to 25 ± 4.16%) and heart rate (150-120 beats per minute). The nanoparticle exposed embryos developed malformed larvae with a characteristic of pericardial edema, curved body, curved notochord, curved tail and curved tail tip. These results suggest that strain LS4 might be playing a role as a contributor in the formation of iron oxide nanoparticle in the Ribander saltpan sediment, however; its high concentration will have a negative impact on aquaculture in these saltpans.
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Affiliation(s)
- Kirti Ranjan Das
- Department of Biotechnology, Goa University, Taleigao Plateau, Goa, 403206, India
| | - Meenal Kowshik
- Department of Biological Sciences, BITS Pilani K K Birla Goa Campus, Goa, India
| | - M K Praveen Kumar
- Department of Zoology, Goa University, Taleigao Plateau, Goa, 403206, India
| | - Savita Kerkar
- Department of Biotechnology, Goa University, Taleigao Plateau, Goa, 403206, India.
| | - S K Shyama
- Department of Zoology, Goa University, Taleigao Plateau, Goa, 403206, India
| | - Samir Mishra
- Environmental Biotechnology Laboratory, School of Biotechnology, KIIT University, Odisha, 751024, India
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Characterization, genetic regulation and production of cyanobacterial exopolysaccharides and its applicability for heavy metal removal. Carbohydr Polym 2018; 179:228-243. [DOI: 10.1016/j.carbpol.2017.09.091] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2017] [Revised: 09/15/2017] [Accepted: 09/26/2017] [Indexed: 11/18/2022]
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48
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Sasikumar K, Kozhummal Vaikkath D, Devendra L, Nampoothiri KM. An exopolysaccharide (EPS) from a Lactobacillus plantarum BR2 with potential benefits for making functional foods. BIORESOURCE TECHNOLOGY 2017; 241:1152-1156. [PMID: 28579175 DOI: 10.1016/j.biortech.2017.05.075] [Citation(s) in RCA: 91] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2017] [Revised: 05/12/2017] [Accepted: 05/14/2017] [Indexed: 06/07/2023]
Abstract
A high molecular weight EPS of glucomannan nature was recovered and purified to get an yield of 2.8±0.5g/L from Lb. plantarum BR2 and it displayed potent antioxidant activity with 29.8% radical scavenging activity and 19% total antioxidant capacity. At 100µg/ml concentration, it is capable of inhibiting the alpha amylase activity by 10% and at 300µg/ml, it drastically inhibited the alpha-glucosidase activity by 67% which indicates its antidiabetic potential. More interestingly, at a concentration level of 0.1%, it reduced the cholesterol level by a margin of 45% in an in vitro assay. The sample didn't reveal any cytotoxicity against H9C2 normal cells indicating its potential for safe use as a food additive.
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Affiliation(s)
- Keerthi Sasikumar
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST), Trivandrum 695019, Kerala, India
| | - Deepti Kozhummal Vaikkath
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST), Trivandrum 695019, Kerala, India
| | - Leena Devendra
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST), Trivandrum 695019, Kerala, India
| | - K Madhavan Nampoothiri
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST), Trivandrum 695019, Kerala, India.
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Malick A, Khodaei N, Benkerroum N, Karboune S. Production of exopolysaccharides by selected Bacillus strains: Optimization of media composition to maximize the yield and structural characterization. Int J Biol Macromol 2017; 102:539-549. [DOI: 10.1016/j.ijbiomac.2017.03.151] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2017] [Revised: 03/20/2017] [Accepted: 03/21/2017] [Indexed: 12/23/2022]
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Biswas J, Paul AK. Optimization of factors influencing exopolysaccharide production by Halomonas xianhensis SUR308 under batch culture. AIMS Microbiol 2017; 3:564-579. [PMID: 31294176 PMCID: PMC6604991 DOI: 10.3934/microbiol.2017.3.564] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Accepted: 06/28/2017] [Indexed: 11/18/2022] Open
Abstract
A moderately halophilic bacterium, Halomonas xianhensis SUR308 (GenBank Accession No. KJ933394) was isolated from multi-pond solar salterns of Odisha, India. Exopolysaccharide (EPS) production by this strain in malt extract yeast extract (MY) medium has been optimized under batch culture system. Among the different media tested, MY medium showed an EPS production of 2.55 g/L, which increased to 2.85 g/L under optimized aeration. An initial pH of 7.5 and incubation temperature of 32 °C were found to be most suitable for EPS production by the isolate under aerobic condition. An EPS production of 3.85 g/L was achieved when the growth medium was supplemented with 2.5% NaCl. Glucose was the most favourable carbon source for EPS production and maximum production (5.70 g/L) was recorded with 3% glucose. However, growth as well as production of EPS was remarkably affected when the growth medium was supplemented with hydrocarbons as sole source of carbon. Among different nitrogen sources, casein hydrolysate at 0.5% level was proved to be the best for EPS production and an initial inoculum dose of 7% (v/v) enhanced the EPS production to 7.78 g/L, while the divalent metal ions were in general toxic to growth and EPS production, EPS synthesis by SUR308 was enhanced with Cr (VI) supplementation.
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Affiliation(s)
- Jhuma Biswas
- Microbiology Laboratory, Department of Botany, University of Calcutta, Kolkata-700019, West Bengal, India
| | - Amal K Paul
- Microbiology Laboratory, Department of Botany, University of Calcutta, Kolkata-700019, West Bengal, India
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