The synergistic effects for the co-cultivation of oleaginous yeast-Rhodotorula glutinis and microalgae-Scenedesmus obliquus on the biomass and total lipids accumulation

Utilization strategy for algal bloom waste through co-digestion with kitchen waste: Comprehensive kinetic and metagenomic analysis

Anaerobic co-digestion (AcoD) with kitchen waste (KW) is an alternative utilization strategy for algal bloom waste (AW). However, the kinetic characteristic and metabolic pathway during this process need to be explored further. This study conducted a comprehensive kinetic and metagenomic analysis for AcoD of AW and KW. A maximum co-digestion performance index (CPI) of 1.13 was achieved under the 12% AW addition. Co-digestion improved the total volatile fatty acids generation and the organic matter transformation efficiency. Kinetic analysis showed that the Superimposed model fit optimally (R2Adj = 0.9988-0.9995). The improvement of the kinetic process by co-digestion was mainly reflected in the increase of the methane production from slowly biodegradable components. Co-digestion enriched the cellulolytic bacterium Clostridium and the hydrogenotrophic methanogenic archaea Methanobacterium. Furthermore, for metagenome analysis, the abundance of key genes concerned in cellulose and lipid hydrolysis, pyruvate and methane metabolism were both increased in co-digestion process. This study provided a feasible process for the utilization of AW produced seasonally and a deeper understanding of the AcoD synergistic mechanism from kinetic and metagenomic perspectives.

Combined zeolite-based ammonia slow-release and algae-yeast consortia to treat piggery wastewater: Improved nitrogen and carbon migration

Integration of zeolite-based ammonia adsorption and algae-yeast consortia was developed to remediate piggery wastewater (PW) containing high concentrations of total ammonia nitrogen (TAN) and total organic carbon (TOC). After optimizing the conditions of ammonia adsorption in the PW. Zeolite addition mitigated ammonia toxicity, allowing zeolites to gradually release ammonia while effectively attenuating algal oxidative stress caused by high TAN concentration. Coupling zeolite-based adsorption and yeast co-incubation further increased TOC degradation and available C/N ratio, thus improving biomass (4.51 g/L), oil yield (2.11 g/L), and nutrient removal (84.18%-99.14%). The integrated microalgae-based PW treatment exhibited higher carbon migration into biomass (46.14%) and reduced treatment costs than conventional approaches. Simultaneously, the lowest carbon migration to wastewater also meant the smallest carbon emission into water bodies. These findings demonstrate that this novel strategy can remove nutrients in raw PW effectively and produce high oil-rich biomass in a sustainable and environmentally-friendly manner.

Microalgal co-cultivation -recent methods, trends in omic-studies, applications, and future challenges

The burgeoning human population has resulted in an augmented demand for raw materials and energy sources, which in turn has led to a deleterious environmental impact marked by elevated greenhouse gas (GHG) emissions, acidification of water bodies, and escalating global temperatures. Therefore, it is imperative that modern society develop sustainable technologies to avert future environmental degradation and generate alternative bioproduct-producing technologies. A promising approach to tackling this challenge involves utilizing natural microbial consortia or designing synthetic communities of microorganisms as a foundation to develop diverse and sustainable applications for bioproduct production, wastewater treatment, GHG emission reduction, energy crisis alleviation, and soil fertility enhancement. Microalgae, which are photosynthetic microorganisms that inhabit aquatic environments and exhibit a high capacity for CO2 fixation, are particularly appealing in this context. They can convert light energy and atmospheric CO2 or industrial flue gases into valuable biomass and organic chemicals, thereby contributing to GHG emission reduction. To date, most microalgae cultivation studies have focused on monoculture systems. However, maintaining a microalgae monoculture system can be challenging due to contamination by other microorganisms (e.g., yeasts, fungi, bacteria, and other microalgae species), which can lead to low productivity, culture collapse, and low-quality biomass. Co-culture systems, which produce robust microorganism consortia or communities, present a compelling strategy for addressing contamination problems. In recent years, research and development of innovative co-cultivation techniques have substantially increased. Nevertheless, many microalgae co-culturing technologies remain in the developmental phase and have yet to be scaled and commercialized. Accordingly, this review presents a thorough literature review of research conducted in the last few decades, exploring the advantages and disadvantages of microalgae co-cultivation systems that involve microalgae-bacteria, microalgae-fungi, and microalgae-microalgae/algae systems. The manuscript also addresses diverse uses of co-culture systems, and growing methods, and includes one of the most exciting research areas in co-culturing systems, which are omic studies that elucidate different interaction mechanisms among microbial communities. Finally, the manuscript discusses the economic viability, future challenges, and prospects of microalgal co-cultivation methods.

Pollutants removal, microbial community shift and oleic acid production in symbiotic microalgae-bacteria system

The functional interaction between microorganisms is key in symbiotic microalga-bacteria systems; however, evaluations of fungi and pathogenic microorganisms are not clear. In this study, the roles of three groups (i.e., microalgae-activated sludge (MAS), Microalgae, and activated sludge) in pollutant removal and biomass recovery were comparatively studied. The data implied that microalgal assimilation and bacterial heterotrophic degradation were the major approaches for degradation of nutrients and organic matter, respectively. According to 16S rRNA and internal transcribed spacer sequencing, the relative abundance of Rhodotorula increased remarkably, favoring nutrient exchange between the microalgae and bacteria. The abundances of two types of pathogenic genes (human pathogens and animal parasites) were reduced in the MAS system. The oleic acid content in the MAS system (51.2 mg/g) was 1.7 times higher than that in the Microalgae system. The results can provide a basis for practical application and resource utilization of symbiotic microalgae-bacteria systems.

Artificial microbial consortia for bioproduction processes

The application of artificial microbial consortia for biotechnological production processes is an emerging field in research as it offers great potential for the improvement of established as well as the development of novel processes. In this review, we summarize recent highlights in the usage of various microbial consortia for the production of, for example, platform chemicals, biofuels, or pharmaceutical compounds. It aims to demonstrate the great potential of co-cultures by employing different organisms and interaction mechanisms and exploiting their respective advantages. Bacteria and yeasts often offer a broad spectrum of possible products, fungi enable the utilization of complex lignocellulosic substrates via enzyme secretion and hydrolysis, and microalgae can feature their abilities to fixate CO2 through photosynthesis for other organisms as well as to form lipids as potential fuelstocks. However, the complexity of interactions between microbes require methods for observing population dynamics within the process and modern approaches such as modeling or automation for process development. After shortly discussing these interaction mechanisms, we aim to present a broad variety of successfully established co-culture processes to display the potential of artificial microbial consortia for the production of biotechnological products.

Recent advances on microalgae cultivation for simultaneous biomass production and removal of wastewater pollutants to achieve circular economy

Microalgae are known for containing high value compounds and its significant role in sequestering carbon dioxide. This review mainly focuses on the emerging microalgae cultivation technologies such as nanomaterials technology that can improve light distribution during microalgae cultivation, attached cultivation and co-cultivation approaches that can improve growth and proliferation of algal cells, biomass yield and lipid accumulation in microalgal. This review includes a comprehensive discussion on the use of microbubbles technology to enhance aerated bubble capacity in photobioreactor to improve microalgal growth. This is followed by discussion on the role of microalgae as phycoremediation agent in removal of contaminants from wastewater, leading to better water quality and high productivity of shellfish. The review also includes techno-economic assessment of microalgae biorefinery technology, which is useful for scaling up the microalgal biofuel production system or integrated microalgae-shellfish cultivation system to support circular economy.

Enhanced biomass and lipid production by light exposure with mixed culture of Rhodotorula glutinis and Chlorella vulgaris using acetate as sole carbon source

Microbial biomass and lipid production with mixed-culture of Rhodotorula glutinis and Chlorella vulgaris using acetate as sole carbon source was investigated. Synergistic effect of mixed-culture using 20 g/L acetate significantly promoted cell growth and acetate utilization efficiency. Increasing the proportion of algae in co-culture was beneficial for biomass and lipid accumulation and the optimal ratio of yeast/algae was 1:2. Light exposure further enhanced biomass and lipid titer with 6.9 g/L biomass and 2.6 g/L lipid (38.3 % lipid content) obtained in a 5L bioreactor. The results of lipid classes and fatty acid profiles moreover indicated that more neutral lipids and linolenic acid were synthesized in mixed-culture under light exposure condition, suggesting the great potential in applications of biofuels production. This study provided new insight and strategy for economical microbial biomass and lipid production by light-exposed mixed-culture using inexpensive acetate as carbon source.

Coculturing of Mucor plumbeus and Bacillus subtilis bacterium as an efficient fermentation strategy to enhance fungal lipid and gamma-linolenic acid (GLA) production

This study aimed to improve lipid and gamma-linolenic acid (GLA) production of an oleaginous fungus, Mucor plumbeus, through coculturing with Bacillus subtilis bacteria, optimising the environmental and nutritional culture conditions, and scaling them for batch fermentation. The maximum levels of biomass, lipid, fatty acid, and GLA in a 5 L bioreactor containing cellobiose and ammonium sulfate as the optimal carbon and nitrogen sources, respectively, achieved during the coculturing processes were 14.5 ± 0.4 g/L, 41.5 ± 1.3, 24 ± 0.8, and 20 ± 0.5%, respectively. This strategy uses cellobiose in place of glucose, decreasing production costs. The nutritional and abiotic factor results suggest that the highest production efficiency is achieved at 6.5 pH, 30 °C temperature, 10% (v/v) inoculum composition, 200 rpm agitation speed, and a 5-day incubation period. Interestingly, the GLA concentration of cocultures (20.0 ± 0.5%) was twofold higher than that of monocultures (8.27 ± 0.11%). More importantly, the GC chromatograms of cocultures indicated the presence of one additional peak corresponding to decanoic acid (5.32 ± 0.20%) that is absent in monocultures, indicating activation of silent gene clusters via cocultivation with bacteria. This study is the first to show that coculturing of Mucor plumbeus with Bacillus subtilis is a promising strategy with industrialisation potential for the production of GLA-rich microbial lipids and prospective biosynthesis of new products.

A review on contemporary approaches in enhancing the innate lipid content of yeast cell

For the past few decades, industrialization has made a huge environmental hazard to the world with its waste. The approach of waste to wealth in the recent era has made many Eco-economical suggestions for the industries. The valuable products in biorefinery aspects of the eco-economical suggestions include; energy products, high-value drugs and novel materials. Bio-lipids are found to be the major influencing eco-economical products in the process. Production of bio-lipid from microbial sources has paved the way for future research on lipid-bioproducts. The yeast cell is a unique organism with a large unicellular structure capable of accumulating a high amount of lipids. It constitutes 90% of neutral lipids. Various strategies enhance the lipid profile of yeast cells: usage of oleaginous yeast, usage of low cost (or) alternative substrates, developing stress conditions in the growth medium, using genetically modified yeast, altering metabolic pathways of yeast and by using the symbiotic cultures of yeast with other microbes. The metabolic alterations of lipid pathways such as lipid biosynthesis, lipid elongation, lipid accumulation and lipid degradation have been a striking feature of research in lipid-based microbial work. The lipid-bioproducts have also made a strong footprint in the history of alternative energy products. It includes partial acyl glycerol, oleochemicals, phospholipids and biofuels. This report comprises the recent approaches carried out in the yeast cell for enhancing its lipid content. The limitations, challenges and future scope of individual strategies were also highlighted in this article.

Co-cultivation of Phaeodactylum tricornutum and Aurantiochytrium limacinum for polyunsaturated omega-3 fatty acids production

Marine protist Aurantiochytrium limacinum produces docosahexaenoic acid (DHA) as main polyunsaturated fatty acid (PUFA) and lacks any monounsaturated fatty acids (MUFA), while eicosapentaenoic acid (EPA) and MUFA's are produced by Phaeodactylum tricornutum. The marine diatom P. tricornutum was co-cultured with A.limacinum to match the EPA:DHA ratio of fish oil. Modulation in initial cell density ratio overcame the dominance of A.limacinum during co-cultivation and led to regulated proliferation of both species. Media engineering with nitrate and glycerol concentration yielded 2:1 (56.44: 30.11) mg g^-1 and 1:1 (47.43: 49.61) mg g^-1 EPA: DHA ratio. The oil and biomass obtained from co-cultivation comprised of MUFA's such as palmitoleic acid (2.65 mg g^-1) and oleic acid (1.25 mg g^-1) along with pigments like fucoxanthin (367.18 µg g^-1), β-carotene (8.98 µg g^-1) and astaxanthin (0.77 µg g^-1). Thus, co-cultivation of P. tricornutum with A. limacinum represented a unique strategy towards achieving desired fatty acid composition.

A review on co-culturing of microalgae: A greener strategy towards sustainable biofuels production

There is a growing global recognition that microalgae-based biofuel are environment-friendly and economically feasible options because they incur several advantages over traditional fossil fuels. Also, the microalgae can be manipulated for extraction of value-added compounds such as lipids (triacylglycerols), carbohydrates, polyunsaturated fatty acids, proteins, pigments, antioxidants, various antimicrobial compounds, etc. Recently, there is an increasing focus on the co-cultivation practices of microalgae with other microorganisms to enhance biomass and lipid productivity. In a co-cultivation strategy, microalgae grow symbiotically with other heterotrophic microbes such as bacteria, yeast, fungi, and other algae/microalgae. They exchange nutrients and metabolites; this helps to increase the productivity, therefore facilitating the commercialization of microalgal-based fuel. Co-cultivation also facilitates biomass harvesting and waste valorization, thereby help to build an algal biorefinery platform for bioenergy production along with multivariate high value bioproducts and simultaneous waste bioremediation. This article comprehensively reviews various microalgae cultivation practices utilizing co-culture approaches with other algae, fungi, bacteria, and yeast. The review mainly focuses on the impact of several binary culture strategies on biomass and lipid yield. The advantages and challenges associated with the procedure along with their respective cultivation modes have also been presented and discussed in detail.

Screening and application of Chlorella strains on biosequestration of the power plant exhaust gas evolutions of biomass growth and accumulation of toxic agents

To use microalgae for the biosequestration of carbon dioxide (CO₂) emitted from the coal-fired power plants, the screening of high CO₂ tolerant microalgae and their accumulation of toxic agents have attracted significant research attention. This study evaluated 10 Chlorella strains for high CO₂ tolerance using combined growth rates and growth periods subjected to logistic parameters. We selected LAMB 31 with high r (0.89 ± 0.10 day^-1), high k (6.51 ± 0.19), and medium Tp (5.17 ± 0.15 day) as a candidate for CO₂ biosequestration. Correspondingly, six genes involving carbon fixation and metabolism processes were upregulated in LAMB 31 under high CO₂ conditions, verifying its high CO₂ tolerant ability. LAMB 31 cultures exposed to exhaust gas of power plant under different flow rates grew well, but the high flow rate (0.6 L/h) showed inhibition effects compared with low flow rates (0.2 and 0.3 L/h) at the end of the culturing period. The toxic agents in the exhaust gas including sulfur, arsenic, and mercury accumulated in LAMB 31 biomass but were deemed safe for use in the production of both human food and animal feed based on the National Food Safety Standard in China. This study showed a complete process involving high CO₂ tolerant microalgae screening, high CO₂ tolerant verification, and in situ application in a power plant. Data results provide valuable information as the basis for future research studies in microalgae application on CO₂ mitigation at emission sources.

Recent progress in flocculation, dewatering, and drying technologies for microalgae utilization: Scalable and low-cost harvesting process development

Microalgal research has made significant progress in terms of the high-value-added industrial application of microalgal biomass and its derivatives. However, cost-effective techniques for producing, harvesting, and processing microalgal biomass on a large scale still need to be fully explored in order to optimize their performance and achieve commercial robustness. In particular, technologies for harvesting microalgae are critical in the practical process as they require excessive energy and equipment costs. This review focuses on microalgal flocculation, dewatering, and drying techniques and specifically covers the traditional approaches and recent technological progress in harvesting microalgal biomass. Several aspects, including the characteristics of the target microalgae and the type of final value-added products, must be considered when selecting the appropriate harvesting technique. Furthermore, considerable aspects and possible future directions in flocculation, dewatering, and drying steps are proposed to develop scalable and low-cost microalgal harvesting systems.

Optimising nutrients in the culture medium of Rhodosporidium toruloides enhances lipids production

Rhodosporidium toruloides is a useful oleaginous yeast, but lipids production is affected by various factors including nutrients in the culture medium. Herein, the R-ZL2 high-yield mutant strain was used to investigate the effects of different carbon sources (sucrose, glucose, xylose), nitrogen sources (ammonium sulphate, ammonium nitrate), and C/N ratio on lipids production capacity, get the following conclusion (1) Compared with glucose and xylose, sucrose was a superior carbon source for lipids production; (2) When using ammonium sulphate as the nitrogen source, a C/N ratio of 200:1 achieved the highest biomass, lipids production and lipids content (10.7 g/L, 6.32 g/L and 59%, respectively), and lipids produced under different C/N conditions have potential for biodiesel production (except for C/N = 40 and C/N = 80); (3) When using ammonium nitrate as the nitrogen source, a C/N ratio of 200:1 achieved the highest biomass, lipids production and lipids content (12.1 g/L, 8.25 g/L and 65%, respectively), and lipids produced under different C/N ratio conditions have potential for biodiesel production. Thus, a combination of sucrose and ammonium nitrate was optimal for the lipid accumulation in R-ZL2. The findings will lay a foundation for further improving lipids yields.

Enhanced production of microalgal biomass and lipid as an environmentally friendly biodiesel feedstock through actinomycete co-culture in biogas digestate effluent

In this study, an innovative approach to enhance the production of microalgal biomass and lipid as a promising sustainable feedstock for biodiesel was proposed using an actinomycetes co-culture with microalgae in the biogas digestate effluent (BDE) that can be employed as an environmentally friendly and cost-effective strategy. Among tested actinomycete isolates, Piscicocus intestinalis WA3 produced indole-3-acetic acid and siderophores as algal growth promoting agents and showed effective lipid accumulation with satisfying fatty acids composition. During co-cultivation of P. intestinalis WA3 with microalga Tetradesmus obliquus AARL G022 in the BDE, biomass production, chlorophyll a content, and lipid productivity were significantly increased by 1.30 folds, 1.39 folds, and 1.55 folds, respectively, compared to microalgae monoculture. The accumulated lipids contained long-chain fatty acids with better fuel properties that could potentially be used as biodiesel feedstock. The overall results evidenced that actinomycete co-culture would contribute greatly to the cost-effective production of environmental-friendly microbial-based biofuel.

Enhancement of Lipid Productivity and Self-flocculation by Cocultivating Monoraphidium sp. FXY-10 and Heveochlorella sp. Yu Under Mixotrophic Mode

To maintain high microalgae lipid productivity and flocculation efficiency simultaneously and reduce the production cost of microalgae lipids, Monoraphidium sp. FXY-10 with high lipid-producing capacity and Heveochlorella sp. Yu with strong self-flocculation ability were cocultivated and studied. Cocultivated microalgae lipid productivity and flocculation efficiency were increased to 203.8 mg L^-1 day^-1 and 70.55%, respectively, which is potentially related to the excessive competitive depletion of nitrogen sources and the upregulation of correlative key genes in lipid anabolic metabolism. Under cocultivation conditions, microalgae cells could enter the stationary phase 2 days earlier than that under monocultivation conditions, thus reducing the culture time. Relative expression of the accD, ME, and rbcL genes was upregulated to varying degrees, and the enzyme activities of ACCase, ME, and RuBisCO were also significantly increased compared with those in monocultivation. Moreover, fatty acid composition showed that microalgae lipids in cocultivation exhibited potential as a feedstock for biodiesel.

Co-cultivation of microalga and xylanolytic bacterium by a continuous two-step strategy to enhance algal lipid production

To enhance microalgal lipid production, canonical two-step cultivation strategy that by transferring the microalgal cells grown in nutrient-replete medium to nutrient-depleted medium is widely used. However, the harvesting step during the transfer raises the production cost. To avoid the harvesting step, this study developed a continuous two-step (CTS) cultivation strategy. In the strategy, Chlorella sacchrarophila was grown in bioreactor while a xylanolytic bacterium Cellvibrio pealriver grown in an inner bag that embedded in the bioreactor; after the first-step co-cultivation, the inner bag is removed which then start the second-step cultivation of C. sacchrarophila. Based on the strategy, the lipid production was determined as 825.34-929.79 mg·L^-1, which were 1.7-1.9 times higher than that of cultivation in canonical two-step strategy using glucose as feedstock. During the CTS strategy, the co-cultivation using xylan as feedstock promotes the microalgal growth and the removal of inner bag produces nutrient-depleted condition for enhancing microalgal lipid production.

Bioreactor Co-Cultivation of High Lipid and Carotenoid Producing Yeast Rhodotorula kratochvilovae and Several Microalgae under Stress

The co-cultivation of red yeasts and microalgae works with the idea of the natural transport of gases. The microalgae produce oxygen, which stimulates yeast growth, while CO₂ produced by yeast is beneficial for algae growth. Both microorganisms can then produce lipids. The present pilot study aimed to evaluate the ability of selected microalgae and carotenogenic yeast strains to grow and metabolize in co-culture. The effect of media composition on growth and metabolic activity of red yeast strains was assessed simultaneously with microalgae mixotrophy. Cultivation was transferred from small-scale co-cultivation in Erlenmeyer flasks to aerated bottles with different inoculation ratios and, finally, to a 3L bioreactor. Among red yeasts, the strain R. kratochvilovae CCY 20-2-26 was selected because of the highest biomass production on BBM medium. Glycerol is a more suitable carbon source in the BBM medium and urea was proposed as a compromise. From the tested microalgae, Desmodesmus sp. were found as the most suitable for co-cultivations with R. kratochvilovae. In all co-cultures, linear biomass growth was found (144 h), and the yield was in the range of 8.78–11.12 g/L of dry biomass. Lipids increased to a final value of 29.62–31.61%. The FA profile was quite stable with the UFA portion at about 80%. Around 1.98–2.49 mg/g CDW of carotenoids with torularhodine as the major pigment were produced, ubiquinone production reached 5.41–6.09 mg/g, and ergosterol yield was 6.69 mg/g. Chlorophyll production was very low at 2.11 mg/g. Pilot experiments have confirmed that carotenogenic yeasts and microalgae are capable of symbiotic co-existence with a positive impact om biomass growth and lipid metabolites yields.

Co-culturing microbial consortia: approaches for applications in biomanufacturing and bioprocessing

The application of microbial co-cultures is now recognized in the fields of biotechnology, ecology, and medicine. Understanding the biological interactions that govern the association of microorganisms would shape the way in which artificial/synthetic co-cultures or consortia are developed. The ability to accurately predict and control cell-to-cell interactions fully would be a significant enabler in synthetic biology. Co-culturing method development holds the key to strategically engineer environments in which the co-cultured microorganism can be monitored. Various approaches have been employed which aim to emulate the natural environment and gain access to the untapped natural resources emerging from cross-talk between partners. Amongst these methods are the use of a communal liquid medium for growth, use of a solid-liquid interface, membrane separation, spatial separation, and use of microfluidics systems. Maximizing the information content of interactions monitored is one of the major challenges that needs to be addressed by these designs. This review critically evaluates the significance and drawbacks of the co-culturing approaches used to this day in biotechnological applications, relevant to biomanufacturing. It is recommended that experimental results for a co-cultured species should be validated with different co-culture approaches due to variations in interactions that could exist as a result of the culturing method selected.

Co-Cultivation of Leptolyngbya tenuis (Cyanobacteria) and Chlorella ellipsoidea (Green alga) for Biodiesel Production, Carbon Sequestration, and Cadmium Accumulation

The co-cultivation approach using cyanobacteria-Leptolyngbya tenuis and green alga-Chlorella ellipsoidea demonstrated in the present study showed additive and synergistic effects on biomass yield, biomass productivity, lipid yield, lipid productivity, CO₂ fixation, and cadmium bioremediation efficiency. The results of co-culture in batch mode revealed about 2-3 times increase in biomass and two times increase in total lipid, when compared to the pure culture batches. The results revealed that co-cultures exhibited significantly high CO₂ fixation rate of 2.63  ±  0.09 g/L/d, which is 1.5-2 times better than monocultures (P < 0.05). To explore the bioaccumulation of cadmium by co-cultures and pure cultures, different concentrations of cadmium nitrate was used in flask trials. Cadmium accumulation was observed in the order: co-culture (74%, 0.37 mg/L) > Chlorella (58%, 0.29 mg/L) > Leptolyngbya (50%, 0.25 mg/L) (P < 0.05). In addition, fatty acid composition, CHNS analysis, biodiesel characterization, and biochemical compositions were also determined using co-culture method. The maximum biomass yield, productivity, lipid content, and CO₂ fixation rate in cadmium induced co-culture were 3.95  ±  0.13 g/L, 258.88  ±  15.75 mg/L/d, 41.43  ±  0.71%, and 3.21  ±  0.20 g/L/d, respectively which is 1.2, 1.3, 2.3, and 1.2 times higher than the control (P < 0.05). Cadmium induced changes in growth and lipid yield using co-culture suggests cost-effective and eco-friendly production of biodiesel and carbon mitigation.

Microbial co-culturing strategies for the production high value compounds, a reliable framework towards sustainable biorefinery implementation - an overview

The microbial co-cultures or consortia are a natural set of microorganisms formed from different species or the same species but different strains, in which members can interact with each other. The co-culture systems have wide variety of technological applications such as the production of foods, treatment of wastewater, removal of toxic substances, environmental recovery, and all these without the need to work in sterile conditions. Therefore, the need of understanding communication mechanisms between cell-to-cell within co-culture will allow to construct and to program their biological behavior from the use of complex substrates to produce biocompounds. The technology of co-culture systems enables the development of biorefinery platforms to obtain biofuels, and high value compounds through biomass transformation by sustainable process. This review focuses on understanding the roles of consortia microbial to design and built co-culture systems to produce high value compounds in terms a sustainable biorefinery.

Microbial biodiesel production from industrial organic wastes by oleaginous microorganisms: Current status and prospects

This review aims to encourage the technical development of microbial biodiesel production from industrial-organic-wastes-derived volatile fatty acids (VFAs). To this end, this article summarizes the current status of several key technical steps during microbial biodiesel production, including (1) acidogenic fermentation of bio-wastes for VFA collection, (2) lipid accumulation in oleaginous microorganisms, (3) microbial lipid extraction, (4) transesterification of microbial lipids into crude biodiesel, and (5) crude biodiesel purification. The emerging membrane-based bioprocesses such as electrodialysis, forward osmosis and membrane distillation, are promising approaches as they could help tackle technical challenges related to the separation and recovery of VFAs from the fermentation broth. The genetic engineering and metabolic engineering approaches could be applied to design microbial species with higher lipid productivity and rapid growth rate for enhanced fatty acids synthesis. The enhanced in situ transesterification technologies aided by microwave, ultrasound and supercritical solvents are also recommended for future research. Technical limitations and cost-effectiveness of microbial biodiesel production from bio-wastes are also discussed, in regard to its potential industrial development. Based on the overview on microbial biodiesel technologies, an integrated biodiesel production line incorporating all the critical technical steps is proposed for unified management and continuous optimization for highly efficient biodiesel production.

Effect of mixed culture of yeast and microalgae on acetyl-CoA carboxylase and Glycerol-3-phosphate acyltransferase expression

In recent years, some studies have reported that co-culturing green algae and yeast improve lipid and biomass concentration. In this study, a co-culture of the oleaginous yeast Rhodotorula glutinis and the microalgae Chlorella vulgaris was consequently conducted with inoculation of microalga and yeast in growth and stationary phases, respectively. For the first time, the expression of two pivotal enzymes in fatty acids synthetic pathway, acetyl-CoA carboxylase and Glycerol-3-phosphate acyltransferase, was evaluated. To evaluate the synergistic impacts of the mixed culture on the enzymes expression, several co-culture models were designed, including the use of different ratio of microalgae to yeast or the use of residual cell-free medium of yeast; a positive impact on enzymes overexpression was shown in the case of the co-culture of the two microorganisms, and when the remaining cell-free medium of yeast was added to the microalgal culture. The results of in vitro co-culture demonstrated increased 6- and 5-fold of nervonic acid (C24:1) and behenic acid (C22:0) concentrations, respectively, in 2:1 microalgae to yeast co-culture as compared to the monoculture batches. Addition of yeast residual cell-free medium in the 2:1 ratio to the microalgal culture enhanced 9 and 6 times nervonic acid (C24:1) and behenic acid (C22:0) amounts, respectively.

Phototrophic Co-cultures From Extreme Environments: Community Structure and Potential Value for Fundamental and Applied Research

Cyanobacteria are found in most illuminated environments and are key players in global carbon and nitrogen cycling. Although significant efforts have been made to advance our understanding of this important phylum, still little is known about how members of the cyanobacteria affect and respond to changes in complex biological systems. This lack of knowledge is in part due to our dependence on pure cultures when determining the metabolism and function of a microorganism. We took advantage of the Culture Collection of Microorganisms from Extreme Environments (CCMEE), a collection of more than 1,000 publicly available photosynthetic co-cultures maintained at the Pacific Northwest National Laboratory, and assessed via 16S rRNA amplicon sequencing if samples readily available from public culture collection could be used in the future to generate new insights into the role of microbial communities in global and local carbon and nitrogen cycling. Results from this work support the existing notion that culture depositories in general hold the potential to advance fundamental and applied research. Although it remains to be seen if co-cultures can be used at large scale to infer roles of individual organisms, samples that are publicly available from existing co-cultures depositories, such as the CCMEE, might be an economical starting point for such studies. Access to archived biological samples, without the need for costly field work, might in some circumstances be one of the few remaining ways to advance the field and to generate new insights into the biology of ecosystems that are not easily accessible. The current COVID-19 pandemic, which makes sampling expeditions almost impossible without putting the health of the participating scientists on the line, is a very timely example.

Methane yield enhancement of mesophilic and thermophilic anaerobic co-digestion of algal biomass and food waste using algal biochar: Semi-continuous operation and microbial community analysis

The impact of algal biochar addition on mesophilic and thermophilic anaerobic co-digestion of algal biomass and food waste was investigated with a focus on semi-continuous operations and functional microbial communities. Under batch co-digestion, the highest co-digestion synergy was observed for a mixture of 25% food waste and 75% algal biomass. During semi-continuous co-digestion of 25% food waste-75% algal biomass mixture, biochar amended digesters exhibited a 12-54% increase in average methane yield (275.8-394.6 mL/gVS) compared to the controls. Elevated temperature induced narrow distributions of volatile fatty acids (VFAs) by inhibiting the production of branched VFAs. Genus Proteiniphilum was selectively enriched by 3.2 folds in mesophilic digesters with biochar amendment while genus Defluviitoga was selectively enriched in thermophilic digesters due to elevated temperature. Methanogenic communities were significantly different in mesophilic and thermophilic digesters. Biochar amendment contributed to shifts in the predominant methanogens leading to a more balanced state of two methanogenic pathways.

Synergy of biofuel production with waste remediation along with value-added co-products recovery through microalgae cultivation: A review of membrane-integrated green approach

Development of advanced biofuels such as bioethanol and biodiesel from renewable resources is critical for the earth's sustainable management and to slow down the global climate change by partial replacement of gasoline and diesel in the transport sector. Being a diverse group of aquatic micro-organisms, algae are the most prominent resources on the planet, distributed in an aquatic system, a potential source of bioenergy, biomass and secondary metabolites. Microalgae-based biofuel production is widely accepted as non-food fuel sources and better choice for achieving goals of incorporation of a clean fuel source into the transportation sector. The present review article provides a comprehensive literature survey as well as a novel approach on the application of microalgae for their simultaneous cultivation and bioremediation of high nutrient containing wastewater. In addition to that, merits and demerits of different existing conventional techniques for microalgae culture reactors, harvesting of algal biomass, oil recovery, use of different catalysts for transesterification reactions and other by-products recovery have been discussed and compared with the membrane-based system to find out the best optimal conditions for higher biomass as well as lipid yield. This article also deals with the use of a tailor-made membrane in an appropriate module that can be used in upstream and downstream processes during algal-based biofuels production. Such membrane-integrated system has the potential of low-cost and eco-friendly separation, purification and concentration enrichment of biodiesel as well as other valuable algal by-products which can bring the high degree of process intensification for scale-up at the industrial stage.

Volatile fatty acids as novel building blocks for oil-based chemistry via oleaginous yeast fermentation

Microbial oils are proposed as a suitable alternative to petroleum-based chemistry in terms of environmental preservation. These oils have traditionally been studied using sugar-based feedstock, which implies high costs, substrate limitation, and high contamination risks. In this sense, low-cost carbon sources such as volatile fatty acids (VFAs) are envisaged as promising building blocks for lipid biosynthesis to produce oil-based bioproducts. VFAs can be generated from a wide variety of organic wastes through anaerobic digestion and further converted into lipids by oleaginous yeasts (OYs) in a fermentation process. These microorganisms can accumulate in the form of lipid bodies, lipids of up to 60% wt/wt of their biomass. In this context, OY is a promising biotechnological tool for biofuel and bioproduct generation using low-cost VFA media as substrates. This review covers recent advances in microbial oil production from VFAs. Production of VFAs via anaerobic digestion processes and the involved metabolic pathways are reviewed. The main challenges as well as recent approaches for lipid overproduction are also discussed.

Optimal integration of microalgae production with photovoltaic panels: environmental impacts and energy balance

BACKGROUND

Microalgae are 10 to 20 times more productive than the current agricultural biodiesel producing oleaginous crops. However, they require larger energy supplies, so that their environmental impacts remain uncertain, as illustrated by the contradictory results in the literature. Besides, solar radiation is often too high relative to the photosynthetic capacity of microalgae. This leads to photosaturation, photoinhibition, overheating and eventually induces mortality. Shadowing microalgae with solar panels would, therefore, be a promising solution for both increasing productivity during hotter periods and producing local electricity for the process. The main objective of this study is to measure, via LCA framework, the energy performance and environmental impact of microalgae biodiesel produced in a solar greenhouse, alternating optimal microalgae species and photovoltaic panel (PV) coverage. A mathematical model is simulated to investigate the microalgae productivity in raceways under meteorological conditions in Sophia Antipolis (south of France) at variable coverture percentages (0% to 90%) of CIGS solar panels on greenhouses constructed with low-emissivity (low-E) glass.

RESULTS

A trade-off must be met between electricity and biomass production, as a larger photovoltaic coverture would limit microalgae production. From an energetic point of view, the optimal configuration lies between 10 and 20% of PV coverage. Nevertheless, from an environmental point of view, the best option is 50% PV coverage. However, the difference between impact assessments obtained for 20% and 50% PV is negligible, while the NER is 48% higher for 20% PV than for 50% PV coverage. Hence, a 20% coverture of photovoltaic panels is the best scenario from an energetic and environmental point of view.

CONCLUSIONS

In comparison with the cultivation of microalgae without PV, the use of photovoltaic panels triggers a synergetic effect, sourcing local electricity and reducing climate change impacts. Considering an economic approach, low photovoltaic panel coverage would probably be more attractive. However, even with a 10% area of photovoltaic panels, the environmental footprint would already significantly decrease. It is expected that significant improvements in microalgae productivity or more advanced production processes should rapidly enhance these performances.

Flocculation Harvesting Techniques for Microalgae: A Review

Microalgae have been considered as one of the most promising biomass feedstocks for various industrial applications such as biofuels, animal/aquaculture feeds, food supplements, nutraceuticals, and pharmaceuticals. Several biotechnological challenges associated with algae cultivation, including the small size and negative surface charge of algal cells as well as the dilution of its cultures, need to be circumvented, which increases the cost and labor. Therefore, efficient biomass recovery or harvesting of diverse algal species represents a critical bottleneck for large-scale algal biorefinery process. Among different algae harvesting techniques (e.g., centrifugation, gravity sedimentation, screening, filtration, and air flotation), the flocculation-based processes have acquired much attention due to their promising efficiency and scalability. This review covers the basics and recent research trends of various flocculation techniques, such as auto-flocculation, bio-flocculation, chemical flocculation, particle-based flocculation, and electrochemical flocculation, and also discusses their advantages and disadvantages. The challenges and prospects for the development of eco-friendly and economical algae harvesting processes have also been outlined here.

Recent advances of biofuels and biochemicals production from sustainable resources using co-cultivation systems

Microbial communities are ubiquitous in nature and exhibit several attractive features, such as sophisticated metabolic capabilities and strong environment robustness. Inspired by the advantages of natural microbial consortia, diverse artificial co-cultivation systems have been metabolically constructed for biofuels, chemicals and natural products production. In these co-cultivation systems, especially genetic engineering ones can reduce the metabolic burden caused by the complex of metabolic pathway through labor division, and improve the target product production significantly. This review summarized the most up-to-dated co-cultivation systems used for biofuels, chemicals and nature products production. In addition, major challenges associated with co-cultivation systems are also presented and discussed for meeting further industrial demands.

Co-culturing of oleaginous microalgae and yeast: paradigm shift towards enhanced lipid productivity

Oleaginous microalgae and yeast are the two major propitious factories which are sustainable sources for biodiesel production, as they can accumulate high quantities of lipids inside their bodies. To date, various microalgal and yeast species have been exploited singly for biodiesel production. However, despite the ongoing efforts, their low lipid productivity and the high cost of cultivation are still the major bottlenecks hindering their large-scale deployment. Co-culturing of microalgae and yeast has the potential to increase the overall lipid productivity by minimizing its production cost as both these organisms can utilize each other's by-products. Microalgae act as an O₂ generator for yeast while consuming the CO₂ and organic acids released by the yeast cells. Further, yeast can break complex sugars in the medium, which can then be utilized by microalgae thereby opening new options for copious and low-cost feedstocks such as agricultural residues. The current review provides a historical and technical overview of the existing studies on co-culturing of yeast and microalgae and elucidates the crucial factors that affect the symbiotic relationship between these two organisms. Furthermore, the review also highlighted the advantages and the future perspectives for paving a path towards a sustainable biodiesel product.

Characterization of a Microalgal UV Mutant for CO2 Biofixation and Biomass Production

The mutagenesis is an emerging strategy for screening microalgal candidates for CO₂ biofixation and biomass production. In this study, by 96-well microplates-UV mutagenesis, a mutant stemmed from Scenedesmus obliquus was screened and named as SDEC-1M. To characterize SDEC-1M, it was cultivated under air and high level CO₂ (15% v/v), and its parental strain (PS) was considered as control. Growth characterizations showed that SDEC-1M grew best in high level CO₂. It indicated that the mutant had high CO₂ tolerance (HCT) and growth potential under high level CO₂. Richer total carbohydrate content (37.26%) and lipid content (24.80%) demonstrated that, compared to its parental strain, SDEC-1M was apt to synthesize energy storage materials, especially under high CO₂ level. Meanwhile, the highest light conversion efficiency (approximately 18 %) was also obtained. Thus, the highest overall biomass productivities were achieved in SDEC-1M under high level CO₂, largely attributed to that the highest productivities of total lipid, total carbohydrate, and crude protein were also achieved in the meantime. By modified UV, therefore, mutagenized SDEC-1M was the better candidate for CO₂ biofixation and biofuel production than its parental strain.

Co-cultivation of Rhodotorula glutinis and Chlorella pyrenoidosa to improve nutrient removal and protein content by their synergistic relationship

With the continuous development of the livestock breeding industry, the amount of piggery wastewater discharged increases year by year, and the pressure of controlling environmental pollution continuously increases. A novel method using a co-culture of Chlorella pyrenoidosa and Rhodotorula glutinis in piggery wastewater was proposed in this study, which was aimed at treating piggery wastewater and producing useful products. The results showed that the optimal inoculum ratio of algae to yeast was 3 : 1 in the wastewater, which achieved the removal efficiencies of 58.53%, 36.07%, 33.20% and 56.25% for ammoniacal nitrogen (NH₃-N), total nitrogen (TN), total protein (TP) and chemical oxygen demand (COD), respectively, after 6 d. The synergistic relationship of C. pyrenoidosa and R. glutinis was preliminarily validated using the oxygen/carbon dioxide exchange balance and scanning electron microscopy images. The co-cultivation system gained 59.8% (w/w) protein within 5 d which can be used as a feed additive, and produces aquatic animals with better growth and quality. Thus, the 1000 litre pilot scale bioreactor was used indoors and removed 82.65% of TN, 53.51% of TP, 93.48% of NH₃-N and 85.44% of COD in 21 d which gave a better performance for TN (p < 0.05) than the bench scale results. This system improves the nutrition removal and protein production efficiencies, and is a promising method for piggery wastewater treatment and the pig breeding industry.

Aiming at treating piggery wastewater and producing useful products, a novel method using a co-culture of Chlorella pyrenoidosa and Rhodotorula glutinis in piggery wastewater was proposed in this study to improve nutrient removal and the protein content in the feed produced.

A new combined approach to improved lipid production using a strictly aerobic and oleaginous yeast

Microbial lipids have potential applications in energy, and food industry, because most of those lipids are triacylglycerol with long-chain fatty-acids that are comparable to conventional vegetable oils and can be obtained without arable land requirement. Rhodosporidium toruloides is a strictly aerobic strain, where oxygen plays a crucial role in growth, maintenance, and metabolite production, such as lipids and carotenoids. Dissolved oxygen concentration is one of the major factors affecting yeast physiological and biochemical characteristics. In this context, different approaches have been developed to increase available oxygen by the increasing the aeration and the addition of an oxygen-vector. The growth of R. toruloides in 2-L mechanical stirred tank reactor equipped with 1 or 2 porous spargers and a 70 C/N ratio, revealed a lipid content of 0.47 and 0.52 g/g and a lipidic productivity of 0.16 and 0.17 g/L day, respectively. The oxygen-vector addition, increased the lipidic productivity for 0.20 g/L day and a lipid contend of 0.51 g of lipids/g of biomass. The combined approach, combining high aeration (AA), and 1% of n-dodecane addition (DA), produced a significant improvement in the lipid accumulation (62%, w/w), when compared with the DA (51%, w/w) and the AA (52%, w/w) approaches. The increasing of lipids accumulation and smaller culture time are key factors for the success of scale-up and profitability of a bioprocess.

Efficient resource recycling from liquid digestate by microalgae-yeast mixed culture and the assessment of key gene transcription related to nitrogen assimilation in microalgae

To determine the feasibility of microalgae-yeast mixed culture using the liquid digestate of dairy wastewater (LDDW) for biofuels and single cell protein (SCP) production, the cell growth, nutrient removal and outputs evaluation of the mono and mixed culture of Chlorella vulgaris and Yarrowia lipolytica in LDDW were investigated by adding glycerol as carbon source. The results showed that the mixed culture could enhance the biological utilization efficiency of nitrogen and phosphorus, and obtain higher yield of biomass (1.62 g/L), lipid (0.31 g/L), protein (0.51 g/L), and higher heating value (34.06 KJ/L). Compared with the mono culture of C. vulgaris, a decline of the transcription level in nitrate reductase and glutamine synthetase II genes in C. vulgaris was observed in the mixed culture when ammonia was sufficient. The results suggest the possibility of using the mixed culture for the efficient treatment of LDDW and resources recycling.

Binary culture of microalgae as an integrated approach for enhanced biomass and metabolites productivity, wastewater treatment, and bioflocculation

Ecological studies of microalgae have revealed their potential to co-exist in the natural environment. It provides an evidence of the symbiotic relationship of microalgae with other microorganisms. The symbiosis potential of microalgae is inherited with distinct advantages, providing a venue for their scale-up applications. The deployment of large-scale microalgae applications is limited due to the technical challenges such as slow growth rate, low metabolites yield, and high risk of biomass contamination by unwanted bacteria. However, these challenges can be overcome by exploring symbiotic potential of microalgae. In a symbiotic system, photosynthetic microalgae co-exist with bacteria, fungi, as well as heterotrophic microalgae. In this consortium, they can exchange nutrients and metabolites, transfer gene, and interact with each other through complex metabolic mechanism. Microalgae in this system, termed as a binary culture, are reported to exhibit high growth rate, enhanced bio-flocculation, and biochemical productivity without experiencing contamination. Binary culture also offers interesting applications in other biotechnological processes including bioremediation, wastewater treatment, and production of high-value metabolites. The focus of the study is to provide a perspective to enhance the understanding about microalgae binary culture. In this review, the mechanism of binary culture, its potential, and limitations are briefly discussed. A number of queries are evolved through this study, which needs to be answered by executing future research to assess the real potential of binary culture.

Combined yeast and microalgal cultivation in a pilot-scale raceway pond for urban wastewater treatment and potential biodiesel production

A mixed culture of oleaginous yeast Lipomyces starkeyi and wastewater native microalgae (mostly Scenedesmus sp. and Chlorella sp.) was performed to enhance lipid and biomass production from urban wastewaters. A 400 L raceway pond, operating outdoors, was designed and used for biomass cultivation. Microalgae and yeast were inoculated into the cultivation pond with a 2:1 inoculum ratio. Their concentrations were monitored for 14 continuous days of batch cultivation. Microalgal growth presented a 3-day initial lag-phase, while yeast growth occurred in the first few days. Yeast activity during the microalgal lag-phase enhanced microalgal biomass productivity, corresponding to 31.4 mgTSS m^-2 d^-1. Yeast growth was limited by low concentrations in wastewater of easily assimilated organic substrates. Organic carbon was absorbed in the first 3 days with a 3.7 mgC L^-1 d^-1 removal rate. Complete nutrient removal occurred during microalgal linear growth with 2.9 mgN L^-1 d^-1 and 0.96 mgP L^-1 d^-1 removal rates. Microalgal photosynthetic activity induced high pH and dissolved oxygen values resulted in natural bactericidal and antifungal activity. A 15% lipid/dry weight was measured at the end of the cultivation time. Fatty acid methyl ester (FAME) analysis indicated that the lipids were mainly composed of arachidic acid.

Heterotrophic culture of Chlorella pyrenoidosa using sucrose as the sole carbon source by co-culture with immobilized yeast

Glucose is normally used as the carbon source for heterotrophic cultivation of algal cells, whereas sucrose is difficult to be heterotrophicly utilized by them. In this study, a new co-culture system was developed through mixed culture of Chlorella pyrenoidosa with immobilized Saccharomyces cerevisiae in the dark to effectively obtain pure algal suspension using sucrose as only carbon source. In this system, a pure algal suspension with a concentration of 2.08g/L was obtained. The lipid content reached 29%, which was higher than that obtained in glucose contained system. In addition, the immobilized yeast beads were repeatedly used for at least three times. Through immobilization, the choice for the yeast strains that are able to hydrolyze sucrose was not limited by its product and pure algal suspension was efficiently obtained. This strategy may effectively decrease the cost of carbon source in the heterotrophic cultivation of microalgae.

Microbial consortia: a critical look at microalgae co-cultures for enhanced biomanufacturing

Monocultures have been the preferred production route in the bio-industry, where contamination has been a major bottleneck. In nature, microorganisms usually exist as part of organized communities and consortia, gaining benefits from co-habitation, keeping invaders at bay. There is increasing interest in the use of co-cultures to tackle contamination issues, and simultaneously increase productivity and product diversity. The feasibility of extending the natural phenomenon of co-habitation to the biomanufacturing industry in the form of co-cultures requires careful and systematic consideration of several aspects. This article will critically examine and review current work on microbial co-cultures, with the intent of examining the concept and proposing a design pipeline that can be developed in a biomanufacturing context.

From low-cost substrates to Single Cell Oils synthesized by oleaginous yeasts

As new feedstock for biofuels, microbial oils have received worldwide attentions due to their environmentally-friendly characters. Microbial oil production based on low-cost raw materials is significantly attractive to the current biodiesel refinery industry. In terms of SCOs production, oleaginous yeast has numerous advantages over bacteria, molds and microalgae based on their high growth rate and lipid yield. Numerous efforts have been made on the competitive lipid production combining the use of cheap raw materials as substrates by yeasts. In this paper, we provided an overview of lipid metabolism in yeast cells. New advances using oleaginous yeast as a cell factory for high-value lipid production from various low-cost substrates are also reviewed, and the enhanced strategies based on synergistic effects of oleaginous yeast and microalgae in co-culture are discussed in details.