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Babaee S, Sepehrmansourie H, Zarei M, Zolfigol MA, Hosseinifard M. Synthesis of picolinates via a cooperative vinylogous anomeric-based oxidation using UiO-66(Zr)-N(CH 2PO 3H 2) 2 as a catalyst. RSC Adv 2023; 13:22503-22511. [PMID: 37497088 PMCID: PMC10368083 DOI: 10.1039/d3ra03438k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 07/18/2023] [Indexed: 07/28/2023] Open
Abstract
The anomeric effect highlights the significant influence of the functional group and reaction conditions on oxidation-reduction. This article successfully investigates the anomeric effect in the synthesis of picolinate and picolinic acid derivatives through a multi-component reaction involving 2-oxopropanoic acid or ethyl 2-oxopropanoate, ammonium acetate, malononitrile, and various aldehydes. To facilitate this process, we employed UiO-66(Zr)-N(CH2PO3H2)2 as a novel nanoporous heterogeneous catalyst. The inclusion of phosphorous acid tags on the UiO-66(Zr)-N(CH2PO3H2)2 offers the potential for synthesizing picolinates at ambient temperature.
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Affiliation(s)
- Saeed Babaee
- Department of Organic Chemistry, Faculty of Chemistry, Bu-Ali Sina University Hamedan 6517838683 Iran +988138380709 +988138282807
| | - Hassan Sepehrmansourie
- Department of Organic Chemistry, Faculty of Chemistry, Bu-Ali Sina University Hamedan 6517838683 Iran +988138380709 +988138282807
| | - Mahmoud Zarei
- Department of Chemistry, Faculty of Science, University of Qom Qom 37185-359 Iran
| | - Mohammad Ali Zolfigol
- Department of Organic Chemistry, Faculty of Chemistry, Bu-Ali Sina University Hamedan 6517838683 Iran +988138380709 +988138282807
| | - Mojtaba Hosseinifard
- Department of Energy, Materials and Energy Research Center P.O. Box 31787-316 Karaj Iran
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Selvakumari S, Venkataraju C, Muthu S, Irfan A, Shanthi D. Donor acceptor groups effect, polar protic solvents influence on electronic properties and reactivity of 2-Chloropyridine-4-carboxylic acid. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Leonova E, Shvirksts K, Borisovs V, Smelovs E, Sokolovska J, Bisenieks E, Duburs G, Grube M, Sjakste N. Spectroscopic and electrochemical study of interactions between DNA and different salts of 1,4-dihydropyridine AV-153. PeerJ 2020; 8:e10061. [PMID: 33240591 PMCID: PMC7664466 DOI: 10.7717/peerj.10061] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Accepted: 09/08/2020] [Indexed: 01/28/2023] Open
Abstract
1,4-dihydropyridines (1,4-DHP) possess important biochemical and pharmacological properties, including antimutagenic and DNA-binding activity. The latter activity was first described for water-soluble 1,4-DHP with carboxylic group in position 4, the sodium salt of the 1,4-DHP derivative AV-153 among others. Some data show the modification of physicochemical properties and biological activities of organic compounds by metal ions that form the salts. We demonstrated the different affinity to DNA and DNA-protecting capacity of AV-153 salts, depending on the salt-forming ion (Na, K, Li, Rb, Ca, Mg). This study aimed to use different approaches to collate data on the DNA-binding mode of AV-153-Na and five other AV-153 salts. All the AV-153 salts in this study quenched the ethidium bromide and DNA complex fluorescence, which points to an intercalation binding mode. For some of them, the intercalation binding was confirmed using cyclic voltammetry and circular dichroism spectroscopy. It was shown that in vitro all AV-153 salts can interact with four DNA bases. The FTIR spectroscopy data showed the interaction of AV-153 salts with both DNA bases and phosphate groups. A preference for base interaction was observed as the AV-153 salts interacted mostly with G and C bases. However, the highest differences were detected in the spectral region assigned to phosphate groups, which might indicate either conformational changes of DNA molecule (B form to A or H form) or partial denaturation of the molecule. According to the UV/VIS spectroscopy data, the salts also interact with the human telomere repeat, both in guanine quadruplex (G4) and single-stranded form; Na and K salts manifested higher affinity to G4, Li and Rb -to single-stranded DNA.
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Affiliation(s)
- Elina Leonova
- Faculty of Medicine, University of Latvia, Riga, Latvia
| | - Karlis Shvirksts
- Institute of Microbiology and Biotechnology, University of Latvia, Riga, Latvia
| | - Vitalijs Borisovs
- Faculty of Medicine, University of Latvia, Riga, Latvia.,Latvian Institute of Organic Synthesis, Riga, Latvia
| | | | | | | | - Gunars Duburs
- Latvian Institute of Organic Synthesis, Riga, Latvia
| | - Mara Grube
- Institute of Microbiology and Biotechnology, University of Latvia, Riga, Latvia
| | - Nikolajs Sjakste
- Faculty of Medicine, University of Latvia, Riga, Latvia.,Latvian Institute of Organic Synthesis, Riga, Latvia
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Mora Vargas JA, Ortega JO, Dos Santos MBC, Metzker G, Gomes E, Boscolo M. A new synthetic methodology for pyridinic sucrose esters and their antibacterial effects against Gram-positive and Gram-negative strains. Carbohydr Res 2020; 489:107957. [PMID: 32109775 DOI: 10.1016/j.carres.2020.107957] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2019] [Revised: 02/04/2020] [Accepted: 02/18/2020] [Indexed: 02/06/2023]
Abstract
Described are the development of a new synthetic method using ultrasonic irradiation and sodium methoxide as catalyst for a series of pyridinic sucrose esters (py-SEs), derived from transesterification of sucrose with picolinic, nicotinic and isonicotinic methyl esters. The reaction was optimized using a 32 x 2 experimental design, the reaction time, temperature and sucrose: methyl ester molar ratio being evaluated. The method proved to be efficient for obtaining monosubstituted esters (≥83%) with high methyl ester consumption (≥79%). The monosubstituted py-SEs were isolated by semipreparative HPLC, characterized by high-resolution mass spectrometry, calorimetry, vibrational spectroscopy, and 1H and 13C NMR. The py-SEs were tested against E. coli, S. aureos, and P. aeruginosa bacteria with minimum inhibitory concentration values equal or inferior to the reference drugs for both E. coli and P. aeruginosa.
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Affiliation(s)
- Jorge Andrés Mora Vargas
- Sao Paulo State University (UNESP), Institute of Biosciences, Humanities and Exact Sciences, Sao Jose do Rio Preto, SP, Brazil.
| | - Julieth Orduña Ortega
- Sao Paulo State University (UNESP), Institute of Biosciences, Humanities and Exact Sciences, Sao Jose do Rio Preto, SP, Brazil; Universidad Santiago de Cali, Facultad de Ciencias Basicas, Campus Pampalinda, Santiago de Cali, Colombia.
| | | | - Gustavo Metzker
- Sao Paulo State University (UNESP), Institute of Biosciences, Humanities and Exact Sciences, Sao Jose do Rio Preto, SP, Brazil.
| | - Eleni Gomes
- Sao Paulo State University (UNESP), Institute of Biosciences, Humanities and Exact Sciences, Sao Jose do Rio Preto, SP, Brazil.
| | - Mauricio Boscolo
- Sao Paulo State University (UNESP), Institute of Biosciences, Humanities and Exact Sciences, Sao Jose do Rio Preto, SP, Brazil.
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Świderski G, Wojtulewski S, Kalinowska M, Świsłocka R, Wilczewska AZ, Pietryczuk A, Cudowski A, Lewandowski W. The influence of selected transition metal ions on the structure, thermal and microbiological properties of pyrazine-2-carboxylic acid. Polyhedron 2020; 175:114173. [DOI: 10.1016/j.poly.2019.114173] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Leonova E, Ošiņa K, Duburs G, Bisenieks E, Germini D, Vassetzky Y, Sjakste N. Metal ions modify DNA-protecting and mutagen-scavenging capacities of the AV-153 1,4-dihydropyridine. Mutat Res Genet Toxicol Environ Mutagen 2019; 845:403077. [PMID: 31561891 DOI: 10.1016/j.mrgentox.2019.06.007] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2018] [Revised: 06/19/2019] [Accepted: 06/28/2019] [Indexed: 11/30/2022]
Abstract
1,4-Dihydropyridines (1,4-DHP) possess important biochemical and pharmacological properties, including antioxidant and antimutagenic activities. AV-153-Na, an antimutagenic and DNA-repair enhancing compound was shown to interact with DNA by intercalation. Here we studied DNA binding of several AV-153 salts to evaluate the impact of AV-153 modifications on its DNA binding capacity, the ability to scavenge the peroxynitrite, to protect HeLa and B-cells cells against DNA damage. Affinity of the AV-153 salts to DNA measured by a fluorescence assay was dependent on the metal ion forming a salt in position 4 of the 1,4-DHP, and it decreased as follows: Mg > Na > Ca > Li > Rb > K. AV-153-K and AV-153-Rb could not react chemically with peroxynitrite as opposed to AV-153-Mg and AV-153-Ca, the latter increased the decomposition rate of peroxynitrite. AV-153-Na and AV-153-Ca effectively reduced DNA damage induced by peroxynitrite in HeLa cells, while AV-153-K and AV-153-Rb were less effective, AV-153-Li did not protect the DNA, and AV-153-Mg even caused DNA damage itself. The Na, K, Ca and Mg AV-153 salts were also shown to reduce the level of DNA damage in human B-cells from healthy donors. Thus, metal ions modify both DNA-binding and DNA-protecting effects of the AV-153 salts.
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Affiliation(s)
- Elina Leonova
- University of Latvia, Jelgavas Street 1, Riga, LV1004, Latvia; Latvian Institute of Organic Synthesis, No. 21 Aizkraukles Street, Riga LV-1006, Latvia.
| | - Kristīne Ošiņa
- University of Latvia, Jelgavas Street 1, Riga, LV1004, Latvia.
| | - Gunars Duburs
- Latvian Institute of Organic Synthesis, No. 21 Aizkraukles Street, Riga LV-1006, Latvia.
| | - Egils Bisenieks
- Latvian Institute of Organic Synthesis, No. 21 Aizkraukles Street, Riga LV-1006, Latvia.
| | - Diego Germini
- Nuclear Organization and Pathologies, CNRS UMR-8126, Institut Gustave Roussy, 39, rue Camille-Desmoulins, 94805 Villejuif, France.
| | - Yegor Vassetzky
- Nuclear Organization and Pathologies, CNRS UMR-8126, Institut Gustave Roussy, 39, rue Camille-Desmoulins, 94805 Villejuif, France.
| | - Nikolajs Sjakste
- University of Latvia, Jelgavas Street 1, Riga, LV1004, Latvia; Latvian Institute of Organic Synthesis, No. 21 Aizkraukles Street, Riga LV-1006, Latvia.
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Świderski G, Wilczewska AZ, Świsłocka R, Markiewicz KH, Lewandowski W. Thermal and spectroscopic study of zinc, manganese, copper, cobalt and nickel 2,3-pyrazinedicarboxylate. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.01.071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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El-Habeeb AA, Refat MS. Metal-Drug Interactions: Synthesis and Spectroscopic Characteristics, Surface Morphology, and Pharmacological Activity of Ephedrine–HCl Complexes with Mo(V), Nb(V), Ga(III), and Ge(IV). RUSS J GEN CHEM+ 2018. [DOI: 10.1134/s1070363218100225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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9
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Świsłocka R, Regulska E, Jarońko P, Lewandowski W. Spectroscopic and theoretical investigations of alkali metal linoleates and oleinates. J Mol Struct 2017; 1148:40-56. [DOI: 10.1016/j.molstruc.2017.07.024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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10
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Azócar MI, Aldabaldetrecu M, levin P, Tamayo L, Guerrero J, Páez MA. Correlating light and thermal stability of silver carboxylate complexes by infrared and 13C NMR spectroscopy. J COORD CHEM 2016. [DOI: 10.1080/00958972.2016.1234610] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Manuel I. Azócar
- Facultad de química y biología, Universidad de Santiago, Santiago, Chile
| | | | - Pedro levin
- Facultad de química y biología, Universidad de Santiago, Santiago, Chile
| | - Laura Tamayo
- Facultad de química y biología, Universidad de Santiago, Santiago, Chile
| | - Juan Guerrero
- Facultad de química y biología, Universidad de Santiago, Santiago, Chile
| | - Maritza A. Páez
- Facultad de química y biología, Universidad de Santiago, Santiago, Chile
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Karabacak M, Calisir Z, Kurt M, Kose E, Atac A. The spectroscopic (FT-IR, FT-Raman, dispersive Raman and NMR) study of ethyl-6-chloronicotinate molecule by combined density functional theory. Spectrochim Acta A Mol Biomol Spectrosc 2016; 153:754-770. [PMID: 26483317 DOI: 10.1016/j.saa.2015.09.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2014] [Revised: 09/03/2015] [Accepted: 09/10/2015] [Indexed: 06/05/2023]
Abstract
In this study, ethyl-6-chloronicotinate (E-6-ClN) molecule is recorded in the region 4000-400 cm(-1) and 3500-100 cm(-1) (FT-IR, FT-Raman and dispersive Raman, respectively) in the solid phase. ((1))H and ((13))C nuclear magnetic resonance (NMR) spectra are recorded in DMSO solution. The structural and spectroscopic data of the molecule are obtained for two possible isomers (S1 and S2) from DFT (B3LYP) with 6-311++G(d,p) basis set calculations. The geometry of the molecule is fully optimized, vibrational spectra are calculated and fundamental vibrations are assigned on the basis of the potential energy distribution (PED) of the vibrational modes. ((1))H and ((13))C NMR chemical shifts are calculated by using the gauge-invariant atomic orbital (GIAO) method. The electronic properties, such as excitation energies, oscillator strengths, wavelengths, HOMO and LUMO energies, are performed by time-dependent density functional theory (TD-DFT). Total and partial density of state and overlap population density of state diagrams analysis are presented for E-6-ClN molecule. Furthermore, frontier molecular orbitals (FMO), molecular electrostatic potential, and thermodynamic features are performed. In addition to these, reduced density gradient of the molecule is performed and discussed. As a conclusion, the calculated results are compared with the experimental spectra of the title compound. The results of the calculations are applied to simulate the vibrational spectra of the molecule, which show excellent agreement with the observed ones. The theoretical and tentative results will give us a detailed description of the structural and physicochemical properties of the molecule. Natural bond orbital analysis is done to have more information stability of the molecule arising from charge delocalization, and to reveal the information regarding charge transfer within the molecules.
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Affiliation(s)
- Mehmet Karabacak
- Department of Mechatronics Engineering, H.F.T. Technology Faculty, Celal Bayar University, Turgutlu, Manisa, Turkey
| | - Zuhre Calisir
- Department of Physics, Ahi Evran University, Kırsehir, Turkey
| | - Mustafa Kurt
- Department of Physics, Ahi Evran University, Kırsehir, Turkey
| | - Etem Kose
- Department of Physics, Celal Bayar University, Manisa, Turkey
| | - Ahmet Atac
- Department of Physics, Celal Bayar University, Manisa, Turkey
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Kowczyk-Sadowy M, Świsłocka R, Lewandowska H, Piekut J, Lewandowski W. Spectroscopic (FT-IR, FT-Raman, 1H- and 13C-NMR), theoretical and microbiological study of trans o-coumaric acid and alkali metal o-coumarates. Molecules 2015; 20:3146-69. [PMID: 25689641 DOI: 10.3390/molecules20023146] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2014] [Revised: 12/29/2014] [Accepted: 01/19/2015] [Indexed: 11/17/2022] Open
Abstract
This work is a continuation of research on a correlation between the molecular structure and electronic charge distribution of phenolic compounds and their biological activity. The influence of lithium, sodium, potassium, rubidium and cesium cations on the electronic system of trans o-coumaric (2-hydroxy-cinnamic) acid was studied. We investigated the relationship between the molecular structure of the tested compounds and their antimicrobial activity. Complementary molecular spectroscopic techniques such as infrared (FT-IR), Raman (FT-Raman), ultraviolet-visible (UV-VIS) and nuclear magnetic resonance (1H- and 13C-NMR) were applied. Structures of the molecules were optimized and their structural characteristics were calculated by the density functional theory (DFT) using the B3LYP method with 6-311++G** as a basis set. Geometric and magnetic aromaticity indices, atomic charges, dipole moments and energies were also calculated. Theoretical parameters were compared to the experimental characteristics of investigated compounds. Correlations between certain vibrational bands and some metal parameters, such as electronegativity, ionization energy, atomic and ionic radius, were found. The microbial activity of studied compounds was tested against Escherichia coli, Bacillus subtilis, Pseudomonas aeruginosa, Staphylococcus aureus, Proteus vulgaris and Candida albicans.
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Masternak J, Barszcz B, Hodorowicz M, Khavryuchenko OV, Majka A. Synthesis and physicochemical characterization of two lead(II) complexes with O-, N-donor ligands. Lone pair functionality and crystal structure. Spectrochim Acta A Mol Biomol Spectrosc 2015; 136:1998-2007. [PMID: 25168002 DOI: 10.1016/j.saa.2014.07.084] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2013] [Revised: 07/25/2014] [Accepted: 07/30/2014] [Indexed: 06/03/2023]
Abstract
A dinuclear [Pb2(4-CHO-5-MeIm)6(NO3)2](NO3)2 (1) and a polynuclear [Pb(2-pzc)2(H2O)]n (2) complexes (where 5(4)-carbaldehyde-4(5)-methylimidazole (5(4)-CHO-4(5)-MeIm) and pyrazine-2-carboxylic acid (2-pzcH)) have been synthesized and characterized by elemental analysis, IR spectroscopy and X-ray crystallography. Structural determination for complex 1 reveals a cationic species [Pb(4-CHO-5-MeIm)3]2+ connected through bridging nitrate(V) ions. There are also an uncoordinated nitrate ions as counterions. Complex 2 is a three-dimensional architecture consisting of Pb6O12 building units. The pyrazine-2-carboxylato ligand behaves as a chelating agent and a bi-connective bridge. The coordination polyhedra around lead(II) ion could be described as a distorted docecahedron (1) or monocapped trigonal prism (2). The luminescent properties of 1 and 2 investigated in the solid state at room temperature indicate structure-dependent photoluminescent properties. The DFT calculations and the X-ray structural data point on rather hemidirected type of coordination around Pb(II) ions of 1 and 2.
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Affiliation(s)
- Joanna Masternak
- Institute of Chemistry, Jan Kochanowski University, 15G Świętokrzyska Str., 25-406 Kielce, Poland.
| | - Barbara Barszcz
- Institute of Chemistry, Jan Kochanowski University, 15G Świętokrzyska Str., 25-406 Kielce, Poland
| | - Maciej Hodorowicz
- Faculty of Chemistry, Jagiellonian University, 3 Ingardena Str., 30-060 Kraków, Poland
| | - Oleksiy V Khavryuchenko
- Chemistry Department, Taras Shevchenko National University of Kyiv, 64 Volodymyrska Str., Kyiv UA-01601, Ukraine
| | - Alina Majka
- Institute of Physical Chemistry, Polish Academy of Sciences, 44/52 Kasprzaka Str., 01-224 Warsaw, Poland
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Affiliation(s)
- M. Ignacio Azócar
- Facultad de Química y Biología, Departamento de Química de los Materiales, Universidad de Santiago de Chile, Santiago, Chile
| | - Grace Gómez
- Facultad de Química y Biología, Departamento de Química de los Materiales, Universidad de Santiago de Chile, Santiago, Chile
| | - Pedro Levín
- Facultad de Química y Biología, Departamento de Química de los Materiales, Universidad de Santiago de Chile, Santiago, Chile
| | - Maritza Paez
- Facultad de Química y Biología, Departamento de Química de los Materiales, Universidad de Santiago de Chile, Santiago, Chile
| | - Hugo Muñoz
- Facultad de Química y Biología, Departamento de Química de los Materiales, Universidad de Santiago de Chile, Santiago, Chile
| | - Nicole Dinamarca
- Facultad de Química y Biología, Departamento de Química de los Materiales, Universidad de Santiago de Chile, Santiago, Chile
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15
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Azócar MI, Gómez G, Velásquez C, Abarca R, Kogan MJ, Páez M. Antibacterial, kinetics and bacteriolytic properties of silver(I) pyridinedicarboxylate compounds. Materials Science and Engineering: C 2014; 37:356-62. [DOI: 10.1016/j.msec.2014.01.033] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2013] [Revised: 12/18/2013] [Accepted: 01/19/2014] [Indexed: 11/18/2022]
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Barszcz B, Masternak J, Hodorowicz M, Matczak-jon E, Jabłońska-wawrzycka A, Stadnicka K, Zienkiewicz M, Królewska K, Kaźmierczak-barańska J. Synthesis, crystal structure and NMR investigation of novel Ca(II) complexes with heterocyclic alcohol, aldehyde and carboxylate ligands. Evaluation of Ca(II) and Cd(II) analogues for anticancer activity. Inorganica Chim Acta 2013; 399:85-94. [DOI: 10.1016/j.ica.2013.01.004] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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17
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Świsłocka R, Piekut J, Lewandowski W. The relationship between molecular structure and biological activity of alkali metal salts of vanillic acid: spectroscopic, theoretical and microbiological studies. Spectrochim Acta A Mol Biomol Spectrosc 2013; 100:31-40. [PMID: 22341494 DOI: 10.1016/j.saa.2012.01.044] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2011] [Revised: 01/04/2012] [Accepted: 01/18/2012] [Indexed: 05/31/2023]
Abstract
In this paper we investigate the relationship between molecular structure of alkali metal vanillate molecules and their antimicrobial activity. To this end FT-IR, FT-Raman, UV absorption and (1)H, (13)C NMR spectra for lithium, sodium, potassium, rubidium and caesium vanillates in solid state were registered, assigned and analyzed. Microbial activity of studied compounds was tested against Escherichia coli, Pseudomonas aeruginosa, Staphylococcus aureus, Proteus vulgaris, Bacillus subtilis and Candida albicans. In order to evaluate the dependence between chemical structure and biological activity of alkali metal vanillates the statistical analysis was performed for selected wavenumbers from FT-IR spectra and parameters describing microbial activity of vanillates. The geometrical structures of the compounds studied were optimized and the structural characteristics were determined by density functional theory (DFT) using at B3LYP method with 6-311++G** as basis set. The obtained statistical equations show the existence of correlation between molecular structure of vanillates and their biological properties.
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Affiliation(s)
- Renata Świsłocka
- Division of Chemistry, Bialystok University of Technology, Zamenhofa 29, 15-435 Białystok, Poland
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18
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Abarca R, Gomez G, Velasquez C, Paez MA, Gulppi M, Arrieta A, Azocar MI. Antibacterial Behavior of Pyridinecarboxylatesilver(I) Complexes. CHINESE J CHEM 2012. [DOI: 10.1002/cjoc.201100666] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Romina Abarca
- Laboratory of Bioinorganic Chemistry, Faculty of Chemistry and Biology, University of Santiago of Chile, Av. Bernardo O'Higgins 3363, Santiago, Chile
| | - Grace Gomez
- Laboratory of Bioinorganic Chemistry, Faculty of Chemistry and Biology, University of Santiago of Chile, Av. Bernardo O'Higgins 3363, Santiago, Chile
| | - Carla Velasquez
- Laboratory of Bioinorganic Chemistry, Faculty of Chemistry and Biology, University of Santiago of Chile, Av. Bernardo O'Higgins 3363, Santiago, Chile
| | - Maritza A. Paez
- Laboratory of Bioinorganic Chemistry, Faculty of Chemistry and Biology, University of Santiago of Chile, Av. Bernardo O'Higgins 3363, Santiago, Chile
| | - Miguel Gulppi
- Laboratory of Bioinorganic Chemistry, Faculty of Chemistry and Biology, University of Santiago of Chile, Av. Bernardo O'Higgins 3363, Santiago, Chile
| | - Abel Arrieta
- Laboratory of Bioinorganic Chemistry, Faculty of Chemistry and Biology, University of Santiago of Chile, Av. Bernardo O'Higgins 3363, Santiago, Chile
| | - Manuel I. Azocar
- Laboratory of Bioinorganic Chemistry, Faculty of Chemistry and Biology, University of Santiago of Chile, Av. Bernardo O'Higgins 3363, Santiago, Chile
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Alparone A, Librando V. Raman DFT study of dimethylnaphthalenes: isomer identification and prediction of biodegradation rate coefficients. Struct Chem 2012; 23:1467-74. [DOI: 10.1007/s11224-012-9951-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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Świsłocka R, Regulska E, Samsonowicz M, Lewandowski W. Experimental (FT-IR, FT-Raman, 1H, 13C NMR) and theoretical study of alkali metal 2-aminonicotinates. Polyhedron 2009. [DOI: 10.1016/j.poly.2009.07.048] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Borawska M, Koczoń P, Piekut J, Świsłocka R, Lewandowski W. Vibrational spectra and antimicrobial activity of selected bivalent cation benzoates. J Mol Struct 2009. [DOI: 10.1016/j.molstruc.2008.09.018] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Segl’a P, Miklovič J, Mikloš D, Mrázová V, Krupková L, Hudecová D, Ondrušová Z, Švorec J, Moncol J, Melník M. Synthesis, spectroscopic properties, crystal structure and biological activities of copper(II) 2-methylthionicotinate complexes with furopyridines. TRANSIT METAL CHEM 2008. [DOI: 10.1007/s11243-008-9151-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Segl’a P, Miklovič J, Mikloš D, Titiš J, Herchel R, Moncol J, Kaliňáková B, Hudecová D, Mrázová V, Lis T, Melník M. Crystal structure, spectroscopic and magnetic properties, and antimicrobial activities of cobalt(II) 2-methylthionicotinate complexes with N-heterocyclic ligands. TRANSIT METAL CHEM 2008; 33:967-74. [DOI: 10.1007/s11243-008-9137-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Kalinowska M, Swisłocka R, Borawska M, Piekut J, Lewandowski W. Spectroscopic (FT-IR, FT-Raman, UV) and microbiological studies of di-substituted benzoates of alkali metals. Spectrochim Acta A Mol Biomol Spectrosc 2008; 70:126-35. [PMID: 17890143 DOI: 10.1016/j.saa.2007.07.060] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2007] [Revised: 07/11/2007] [Accepted: 07/15/2007] [Indexed: 05/17/2023]
Abstract
The FT-IR, FT-Raman and UV spectra of 3,5-dihydroxybenzoic and 3,5-dichlorobenzoic acids as well as lithium, sodium, potassium, rubidium, caesium 3,5-dihydroxy- and 3,5-dichlorobenzoates were recorded, assigned and compared. The theoretical geometries, Mulliken atomic charges, IR wavenumbers were obtained in B3LYP/6-311++G** level. On the basis of the gathered experimental and theoretical data the effect of metals and substituents on the electronic system of studied compounds were investigated. Moreover, the antimicrobiological activity of studied compounds against two species of bacteria: Bacillus subtilis, Staphylococus aureus and one species of yeast: Candida albicans were studied after 24 and 48 h of incubation. The attempt was made, to find out whether there is any correlation between the first principal component and the degree of growth inhibition exhibited by studied compounds in relation to selected microorganisms.
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Affiliation(s)
- M Kalinowska
- Department of Chemistry, Białystok Technical University, Zamenhofa 29, 15-435 Białystok, Poland
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Kalinowska M, Borawska M, Świsłocka R, Piekut J, Lewandowski W. Spectroscopic (IR, Raman, UV, 1H and 13C NMR) and microbiological studies of Fe(III), Ni(II), Cu(II), Zn(II) and Ag(I) picolinates. J Mol Struct 2007; 834-836:419-25. [DOI: 10.1016/j.molstruc.2006.11.045] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Zelenák V, Vargová Z, Györyová K. Correlation of infrared spectra of zinc(II) carboxylates with their structures. Spectrochim Acta A Mol Biomol Spectrosc 2007; 66:262-72. [PMID: 16829167 DOI: 10.1016/j.saa.2006.02.050] [Citation(s) in RCA: 234] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2005] [Revised: 02/22/2006] [Accepted: 02/22/2006] [Indexed: 05/10/2023]
Abstract
The correlation of the infrared spectra of zinc(II) carboxylates with their structures was investigated in the paper. The complexes with different modes of the carboxylate binding, from chelating, through bridging (syn-syn, syn-anti, monatomic), ionic to monodentate were used for the study, namely [Zn(C6H5CHCHCOO)2(H2O)2] (I) with chelating carboxylate group (C6H5CHCHCOO=cinnamate), [Zn2(C6H5COO)4(pap)2] (II) with syn-syn bridging carboxylate (C6H5COO=benzoate; pap=papaverine), [Zn(C6H5CHCHCOO)2(mpcm)]n (III) with syn-anti carboxylate bridge (mpcm=methyl-3-pyridylcarbamate), [Zn(C5H4NCOO)2(H2O)4] (IV) with ionic carboxylate group (C5H4NCOO=nicotinate), [Zn(C6H5COO)2(pcb)2]n (V) with monodentate carboxylate coordination (pcb=3-pyridylcarbinol) and [Zn3(C6H5COO)6(nia)2] (VI) with syn-syn and monatomic carboxylate bridges (nia=nicotinamide). First, the mode of the carboxylate binding was assigned from the infrared spectra using the magnitude of the separation between the carboxylate stretches, Deltaexp=nuas(COO-)-nus(COO-). Then the values Deltaexp were compared with those calculated from structural data of the carboxylate anion (Deltacalc). The conclusions about the carboxylate binding which resulted from the Delta values, were confronted with the crystal structure of the complexes. The limitations and recommendations were formulated to assign the mode of the carboxylate binding from the infrared spectra. The dependence of the Deltaexp values on the magnitudes of Zn-O-C angles in bidentate carboxylate coordination was observed.
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Affiliation(s)
- V Zelenák
- Department of Inorganic Chemistry, Faculty of Science, P.J. Safárik University, Moyzesova 11, 041 54 Kosice, Slovak Republic.
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Kalinowska M, Świsłocka R, Lewandowski W. The spectroscopic (FT-IR, FT-Raman, UV and 1H, 13C NMR) and theoretical studies of alkali metal o-methoxybenzoates. J Mol Struct 2006; 792-793:130-8. [DOI: 10.1016/j.molstruc.2005.10.062] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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