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Samarska A, Wiche O. Phytoextraction Options. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2024. [PMID: 39217584 DOI: 10.1007/10_2024_263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
Abstract
Wastewaters often contain an array of economically valuable elements, including elements considered critical raw materials and elements for fertilizer production. Plant-based treatment approaches in constructed wetlands, open ponds, or hydroponic systems represent an eco-friendly and economical way to remove potentially toxic metal(loid)s from wastewater (phytoextraction). Concomitantly, the element-enriched biomass represents an important secondary raw material for bioenergy generation and the recovery of raw materials from the harvested plant biomass (phytomining). At present, phytoextraction in constructed wetlands is still considered a nascent technology that still requires more fundamental and applied research before it can be commercially applied. This chapter discusses the different roles of plants in constructed wetlands during the phytoextraction of economically valuable elements. It sheds light on the utilization of plant biomass in the recovery of raw materials from wastewater streams. Here, we consider phytoextraction of the commonly studied water pollutants (N, P, Zn, Cd, Pb, Cr) and expand this concept to a group of rather exotic metal(loid)s (Ge, REE, PGM) highlighting the role of phytoextraction in the face of climate change and finite resources of high-tech metals.
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Affiliation(s)
- Alla Samarska
- Applied Geoecology Group, Faculty of Natural and Environmental Sciences, Zittau/Görlitz University of Applied Sciences, Zittau, Germany
| | - Oliver Wiche
- Applied Geoecology Group, Faculty of Natural and Environmental Sciences, Zittau/Görlitz University of Applied Sciences, Zittau, Germany.
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2
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Sarvepalli M, Velidandi A, Korrapati N. Optimization of Siderophore Production in Three Marine Bacterial Isolates along with Their Heavy-Metal Chelation and Seed Germination Potential Determination. Microorganisms 2023; 11:2873. [PMID: 38138017 PMCID: PMC10746010 DOI: 10.3390/microorganisms11122873] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 11/24/2023] [Accepted: 11/26/2023] [Indexed: 12/24/2023] Open
Abstract
Siderophores are low-molecular-weight and high-affinity molecules produced by bacteria under iron-limited conditions. Due to the low iron (III) (Fe+3) levels in surface waters in the marine environment, microbes produce a variety of siderophores. In the current study, halophilic bacteria Bacillus taeanensis SMI_1, Enterobacter sp., AABM_9, and Pseudomonas mendocina AMPPS_5 were isolated from marine surface water of Kalinga beach, Bay of Bengal (Visakhapatnam, Andhra Pradesh, India) and were investigated for siderophore production using the Chrome Azurol S (CAS) assay. The effect of various production parameters was also studied. The optimum production of siderophores for SMI_1 was 93.57% siderophore units (SU) (after 48 h of incubation at 30 °C, pH 8, sucrose as carbon source, sodium nitrate as nitrogen source, 0.4% succinic acid), and for AABM_9, it was 87.18 %SU (after 36 h of incubation period at 30 °C, pH 8, in the presence of sucrose, ammonium sulfate, 0.4% succinic acid). The maximum production of siderophores for AMPPS_5 was 91.17 %SU (after 36 h of incubation at 35 °C, pH 8.5, glucose, ammonium sulfate, 0.4% citric acid). The bacterial isolates SMI_1, AABM_9, and AMPPS_5 showed siderophore production at low Fe+3 concentrations of 0.10 µM, 0.01 µM, and 0.01 µM, respectively. The SMI_1 (73.09 %SU) and AMPPS_5 (68.26 %SU) isolates showed siderophore production in the presence of Zn+2 (10 µM), whereas AABM_9 (50.4 %SU) exhibited siderophore production in the presence of Cu+2 (10 µM). Additionally, these bacterial isolates showed better heavy-metal chelation ability and rapid development in seed germination experiments. Based on these results, the isolates of marine-derived bacteria effectively produced the maximum amount of siderophores, which could be employed in a variety of industrial and environmental applications.
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Affiliation(s)
| | | | - Narasimhulu Korrapati
- Department of Biotechnology, National Institute of Technology Warangal, Warangal 506004, Telangana, India; (M.S.); (A.V.)
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Fu D, Duan L, Li X, Jiang C, Zhang T, Chen W. Citrate-promoted dissolution of nanostructured manganese oxides: Implications for nano-enabled sustainable agriculture. J Environ Sci (China) 2023; 125:492-498. [PMID: 36375932 DOI: 10.1016/j.jes.2022.03.009] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2021] [Revised: 02/20/2022] [Accepted: 03/04/2022] [Indexed: 06/16/2023]
Abstract
Nanostructured manganese oxides (nano-MnOx) have shown great promises as versatile agrochemicals in nano-enabled sustainable agriculture, owing to the coupled benefits of controlled release of dissolved Mn2+, an essential nutrient needed by plants, and oxidative destruction of environmental organic pollutants. Here, we show that three δ-MnO2 nanomaterials consisting of nanosheet-assembled flower-like nanospheres not only exhibit greater kinetics in citrate-promoted dissolution, but also are less prone to passivation, compared with three α-MnO2 nanowire materials. The better performance of the δ-MnO2 nanomaterials can be attributed to their higher abundance of surface unsaturated Mn atoms-particularly Mn(III)-that is originated from their specific exposed facets and higher abundance of surface defects sites. Our results underline the great potential of modulating nanomaterial surface atomic configuration to improve their performance in sustainable agricultural applications.
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Affiliation(s)
- Di Fu
- Ministry of Education Key Laboratory of Pollution Processes and Environmental Criteria, Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Lin Duan
- Ministry of Education Key Laboratory of Pollution Processes and Environmental Criteria, Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
| | - Xiaoyan Li
- Ministry of Education Key Laboratory of Pollution Processes and Environmental Criteria, Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Chuanjia Jiang
- Ministry of Education Key Laboratory of Pollution Processes and Environmental Criteria, Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Tong Zhang
- Ministry of Education Key Laboratory of Pollution Processes and Environmental Criteria, Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Wei Chen
- Ministry of Education Key Laboratory of Pollution Processes and Environmental Criteria, Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
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Kong WL, Wen TY, Wang YH, Wu XQ. Physiological and Transcriptome Analyses Revealed the Mechanism by Which Deferoxamine Promotes Iron Absorption in Cinnamomum camphora. Int J Mol Sci 2022; 23:ijms23179854. [PMID: 36077250 PMCID: PMC9456238 DOI: 10.3390/ijms23179854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Revised: 08/26/2022] [Accepted: 08/29/2022] [Indexed: 11/29/2022] Open
Abstract
Iron deficiency causes chlorosis and growth inhibition in Cinnamomum camphora, an important landscaping tree species. Siderophores produced by plant growth-promoting rhizobacteria have been widely reported to play an indispensable role in plant iron nutrition. However, little to date has been determined about how microbial siderophores promote plant iron absorption. In this study, multidisciplinary approaches, including physiological, biochemical and transcriptome methods, were used to investigate the role of deferoxamine (DFO) in regulating Fe availability in C. camphora seedlings. Our results showed that DFO supplementation significantly increased the Fe2+ content, SPAD value and ferric-chelate reductase (FCR) activity in plants, suggesting its beneficial effect under Fe deficiency. This DFO-driven amelioration of Fe deficiency was further supported by the improvement of photosynthesis. Intriguingly, DFO treatment activated the metabolic pathway of glutathione (GSH) synthesis, and exogenous spraying reduced glutathione and also alleviated chlorosis in C. camphora. In addition, the expression of some Fe acquisition and transport-related genes, including CcbHLH, CcFRO6, CcIRT2, CcNramp5, CcOPT3 and CcVIT4, was significantly upregulated by DFO treatment. Collectively, our data demonstrated an effective, economical and feasible organic iron-complexing agent for iron-deficient camphor trees and provided new insights into the mechanism by which siderophores promote iron absorption in plants.
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Affiliation(s)
- Wei-Liang Kong
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University, Nanjing 210037, China
- Jiangsu Key Laboratory for Prevention and Management of Invasive Species, Nanjing Forestry University, Nanjing 210037, China
| | - Tong-Yue Wen
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University, Nanjing 210037, China
- Jiangsu Key Laboratory for Prevention and Management of Invasive Species, Nanjing Forestry University, Nanjing 210037, China
| | - Ya-Hui Wang
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University, Nanjing 210037, China
- Jiangsu Key Laboratory for Prevention and Management of Invasive Species, Nanjing Forestry University, Nanjing 210037, China
| | - Xiao-Qin Wu
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University, Nanjing 210037, China
- Jiangsu Key Laboratory for Prevention and Management of Invasive Species, Nanjing Forestry University, Nanjing 210037, China
- Correspondence: ; Tel./Fax: +86-25-8542-7427
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Monei N, Hitch M, Heim J, Pourret O, Heilmeier H, Wiche O. Effect of substrate properties and phosphorus supply on facilitating the uptake of rare earth elements (REE) in mixed culture cropping systems of Hordeum vulgare, Lupinus albus and Lupinus angustifolius. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:57172-57189. [PMID: 35349058 PMCID: PMC9395493 DOI: 10.1007/s11356-022-19775-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2021] [Accepted: 03/13/2022] [Indexed: 05/13/2023]
Abstract
This study presents how phosphate (P) availability and intercropping may influence the migration of rare earth elements (REEs) in legume-grass associations. In a replacement model, Hordeum vulgare was intercropped with 11% Lupinus albus and 11% Lupinus angustifolius. They were cultivated on two substrates, A (pH = 7.8) and B (pH = 6.6), and treated with 1.5 g P m-2 or 3 g P m-2. Simultaneously, a greenhouse experiment was conducted to quantify carboxylate release. There, one group of L. albus and L. angustifolius was supplied with either 200 µmol L-1 P or 20 µmol L-1 P. L. albus released higher amounts of carboxylates at low P supply than L. angustifolius, while L. angustifolius showed the opposite response. Plants cultivated on substrate B accumulated substantially higher amounts of nutrients and REE, compared to substrate A. Higher P supply did not influence the leaf and stem P concentrations of H. vulgare. Addition of P decreased REE accumulation in barley monocultures on alkaline soil A. However, when H. vulgare was cultivated in mixed culture with L. angustifolius on alkaline substrate A with high P supply, the accumulation of REE in H. vulgare significantly increased. Conversely, on acidic substrate B, intercropping with L. albus decreased REE accumulation in H. vulgare. Our findings suggest a predominant effect of soil properties on the soil-plant transfer of REEs. However, in plant communities and within a certain soil environment, interspecific root interactions determined by species-specific strategies related to P acquisition in concert with the plant's nutrient supply impact REE fluxes between neighbouring plants.
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Affiliation(s)
- Nthati Monei
- Institute of Geology, Tallinn University of Technology, Tallinn, Estonia
- Biology/Ecology Unit, Institute of Biosciences, Technische Universität Bergakademie Freiberg, Freiberg, Germany
| | - Michael Hitch
- Institute of Geology, Tallinn University of Technology, Tallinn, Estonia
- Western Australian School of Mines, Curtin University, Bentley, Australia
| | - Juliane Heim
- Environmental Microbiology Group, Institute of Biosciences, Technische Universität Bergakademie Freiberg, Freiberg, Germany
| | | | - Hermann Heilmeier
- Biology/Ecology Unit, Institute of Biosciences, Technische Universität Bergakademie Freiberg, Freiberg, Germany
| | - Oliver Wiche
- Biology/Ecology Unit, Institute of Biosciences, Technische Universität Bergakademie Freiberg, Freiberg, Germany.
- AGHYLE, UniLaSalle, Beauvais, France.
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Okoroafor PU, Ogunkunle CO, Heilmeier H, Wiche O. Phytoaccumulation potential of nine plant species for selected nutrients, rare earth elements (REEs), germanium (Ge), and potentially toxic elements (PTEs) in soil. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION 2022; 24:1310-1320. [PMID: 35014898 DOI: 10.1080/15226514.2021.2025207] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Given the possible benefits of phytoextraction, this study evaluated the potential of nine plant species for phytoaccumulation/co-accumulation of selected nutrients, rare earth elements, germanium, and potentially toxic elements. Plants were grown on 2 kg potted soils for 12 weeks in a greenhouse, followed by a measurement of dry shoot biomass. Subsequently, elemental concentrations were determined using inductively coupled mass spectrometry, followed by the determination of amounts of each element accumulated by the plant species. Results show varying accumulation behavior among plants for the different elements. Fagopyrum esculentum and Cannabis sativa were better accumulators of most elements investigated except for chromium, germanium, and silicon that were better accumulated by Zea mays, the only grass species. F. esculentum accumulated 9, 24, and 10% of Copper, Chromium, and Rare Earth Elements in the mobile/exchangeable element fraction of the soils while Z. mays and C. sativa accumulated amounts of Cr and Ge ∼58 and 17% (for Z. mays) and 20 and 9% (for C. sativa) of the mobile/exchangeable element fraction of the soils. Results revealed co-accumulation potential for some elements e.g., (1) Si, Ge, and Cr, (2) Cu and Pb, (3) P, Ca, Co, and REEs based on chemical similarities/sources of origin.
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Affiliation(s)
- Precious Uchenna Okoroafor
- Institute of Biosciences/Interdisciplinary Environmental Research Centre, Technische Universität Bergakademie Freiberg, Freiberg, Germany
| | | | - Hermann Heilmeier
- Institute of Biosciences/Interdisciplinary Environmental Research Centre, Technische Universität Bergakademie Freiberg, Freiberg, Germany
| | - Oliver Wiche
- Institute of Biosciences/Interdisciplinary Environmental Research Centre, Technische Universität Bergakademie Freiberg, Freiberg, Germany
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7
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Schwabe R, Dittrich C, Kadner J, Rudi Senges CH, Bandow JE, Tischler D, Schlömann M, Levicán G, Wiche O. Secondary metabolites released by the rhizosphere bacteria Arthrobacter oxydans and Kocuria rosea enhance plant availability and soil-plant transfer of germanium (Ge) and rare earth elements (REEs). CHEMOSPHERE 2021; 285:131466. [PMID: 34271468 DOI: 10.1016/j.chemosphere.2021.131466] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 07/05/2021] [Accepted: 07/06/2021] [Indexed: 05/02/2023]
Abstract
Here, we explore effects of metallophore-producing rhizobacteria on the plant availability of germanium (Ge) and rare earth elements (REEs). Five isolates of the four species Rhodococcus erythropolis, Arthrobacter oxydans, Kocuria rosea and Chryseobacterium koreense were characterized regarding their production of element-chelators using genome-mining, LC-MS/MS analysis and solid CAS-assay. Additionally, a soil elution experiment was conducted in order to identify isolates that increase solubility of Ge and REEs in soil solution. A. oxydans ATW2 and K. rosea ATW4 released desferrioxamine-, bacillibactin- and surfactin-like compounds that mobilized Ge and REEs as well as P, Fe, Si and Ca in soil. Subsequently, oat, rapeseed and reed canary grass were cultivated on soil and sand and treated with cells and iron depleted culture supernatants of A. oxydans ATW2 and K. rosea ATW4. Inoculation increased plant yield and shoot phosphorus (P), manganese (Mn), Ge and REE concentrations. However, effects of the inoculation varied substantially between the growth substrates and plant species. On sand, A. oxydans ATW2 increased accumulation of REEs in all plant species and root-shoot translocation in rapeseed, while K. rosea ATW4 enhanced REE accumulation in rapeseed only, without effects on other plant species. Sand-cultured oat plants showed increased Ge accumulation and root-shoot translocation in presence of A. oxydans ATW2 cells and K. rosea ATW4 supernatant; however, there was no effect on other plant species, irrespective the growth substrate used. In contrast, soil-cultured rapeseed showed enhanced REE accumulation in presence of cells of A. oxydans ATW2 while there were no effects on other plant species and Ge. The processes involved are not yet fully understood. Nevertheless, we demonstrated that chemical microbe-soil-plant relationships influence plant availability of nutrients together with Ge and REEs, which has major implications on our understanding of biogeochemical element cycling and development of sustainable bioremediation and biomining technologies.
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Affiliation(s)
- Ringo Schwabe
- Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany; Laboratorio de Microbiología Básica y Aplicada, Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Av. Libertador Bernardo ÒHiggins, 3363, Santiago, Chile
| | - Christine Dittrich
- Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany
| | - Julian Kadner
- Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany
| | | | - Julia Elisabeth Bandow
- Applied Microbiology, Ruhr University Bochum, Universitätsstraße 150, 44780, Bochum, Germany
| | - Dirk Tischler
- Microbial Biotechnology, Ruhr University Bochum, Universitätsstraße 150, 44780, Bochum, Germany
| | - Michael Schlömann
- Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany
| | - Gloria Levicán
- Laboratorio de Microbiología Básica y Aplicada, Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Av. Libertador Bernardo ÒHiggins, 3363, Santiago, Chile
| | - Oliver Wiche
- Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany.
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8
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Fan B, Tang M, Yao L, Zhang A, Yin H, Yang W, Ma Z, Xiang W, Bao Z. Germanium fractions in typical paddy soil and its interaction with humic substances. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:9670-9681. [PMID: 33151494 DOI: 10.1007/s11356-020-11482-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Accepted: 10/29/2020] [Indexed: 06/11/2023]
Abstract
Ge and Si differ strongly in their biogeochemical behavior due to the differences in binding capacity to organic matter. The mechanisms of soil organic matter affecting the mobility and bioavailability of Ge in soil-plant system remain unclear. This work aimed to investigate the soil Ge fractions and Ge binding to humic substances in paddy soil. Paddy soil samples taken from Changxing County, Zhejiang Province, China, were investigated by the sequential extraction method. Humic acid (HA) and fulvic acid (FA) isolated from paddy soils were characterized by Fourier transform infrared spectrometry (FT-IR) and 3-dimensional excitation-emission matrix (3D-EEM). The effect of humic substances on the binding of Ge was studied by fluorescence-quenching titration. Results showed that residual Ge was the dominant fraction in soil (up to 85%). The mobile Ge, organic matter bound Ge and easily reduceable compounds bound Ge accounted for approximately 10% of soil TGe and may represented critical labile pools of soil Ge. Organic matter bound Ge significantly correlated (r = 0.56, p < 0.01) with rice Ge concentrations. The fluorescence of HA and FA was markedly quenched by the addition of Ge. The conditional stability constant of HA-Ge complexes was larger than that of FA-Ge complexes, and the complexation capacity of HA-Ge complexes was lower than that of FA-Ge complexes. Humic substances played a dual role in affecting the behavior of dissolved Ge in paddy soil. HA formed stable complexes with Ge and tended to sequester Ge, while FA formed soluble and unstable complexes with Ge and tended to act as a Ge carrier in soil-plant system.
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Affiliation(s)
- Bolun Fan
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan, 430074, Hubei, China
| | - Molan Tang
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan, 430074, Hubei, China
| | - Lingyang Yao
- Zhejiang Institute, China University of Geosciences, Zhejiang, 311305, Hangzhou, China
| | - Aobo Zhang
- Zhejiang Institute of Geological Survey, Zhejiang, 311203, Hangzhou, China
| | - Hanqin Yin
- Zhejiang Institute of Geological Survey, Zhejiang, 311203, Hangzhou, China
| | - Weilin Yang
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan, 430074, Hubei, China
| | - Zhenzhen Ma
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan, 430074, Hubei, China
| | - Wu Xiang
- School of Earth Sciences, China University of Geosciences, Wuhan, 430074, Hubei, China
| | - Zhengyu Bao
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan, 430074, Hubei, China.
- Zhejiang Institute, China University of Geosciences, Zhejiang, 311305, Hangzhou, China.
- Ankang Se-Resources Hi-Tech Co., Ltd, Ankang, 725000, Shaanxi, China.
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Hofmann M, Heine T, Malik L, Hofmann S, Joffroy K, Senges CHR, Bandow JE, Tischler D. Screening for Microbial Metal-Chelating Siderophores for the Removal of Metal Ions from Solutions. Microorganisms 2021; 9:microorganisms9010111. [PMID: 33466508 PMCID: PMC7824959 DOI: 10.3390/microorganisms9010111] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Accepted: 12/30/2020] [Indexed: 11/17/2022] Open
Abstract
To guarantee the supply of critical elements in the future, the development of new technologies is essential. Siderophores have high potential in the recovery and recycling of valuable metals due to their metal-chelating properties. Using the Chrome azurol S assay, 75 bacterial strains were screened to obtain a high-yield siderophore with the ability to complex valuable critical metal ions. The siderophore production of the four selected strains Nocardioides simplex 3E, Pseudomonas chlororaphis DSM 50083, Variovorax paradoxus EPS, and Rhodococcus erythropolis B7g was optimized, resulting in significantly increased siderophore production of N. simplex and R. erythropolis. Produced siderophore amounts and velocities were highly dependent on the carbon source. The genomes of N. simplex and P. chlororaphis were sequenced. Bioinformatical analyses revealed the occurrence of an achromobactin and a pyoverdine gene cluster in P. chlororaphis, a heterobactin and a requichelin gene cluster in R. erythropolis, and a desferrioxamine gene cluster in N. simplex. Finally, the results of the previous metal-binding screening were validated by a proof-of-concept development for the recovery of metal ions from aqueous solutions utilizing C18 columns functionalized with siderophores. We demonstrated the recovery of the critical metal ions V(III), Ga(III), and In(III) from mixed metal solutions with immobilized siderophores of N. simplex and R. erythropolis.
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Affiliation(s)
- Marika Hofmann
- Institute of Biosciences, TU Bergakademie Freiberg, 09599 Freiberg, Germany; (T.H.); (L.M.); (S.H.); (K.J.)
- Correspondence: (M.H.); (D.T.)
| | - Thomas Heine
- Institute of Biosciences, TU Bergakademie Freiberg, 09599 Freiberg, Germany; (T.H.); (L.M.); (S.H.); (K.J.)
| | - Luise Malik
- Institute of Biosciences, TU Bergakademie Freiberg, 09599 Freiberg, Germany; (T.H.); (L.M.); (S.H.); (K.J.)
| | - Sarah Hofmann
- Institute of Biosciences, TU Bergakademie Freiberg, 09599 Freiberg, Germany; (T.H.); (L.M.); (S.H.); (K.J.)
| | - Kristin Joffroy
- Institute of Biosciences, TU Bergakademie Freiberg, 09599 Freiberg, Germany; (T.H.); (L.M.); (S.H.); (K.J.)
| | - Christoph Helmut Rudi Senges
- Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, 44780 Bochum, Germany; (C.H.R.S.); (J.E.B.)
| | - Julia Elisabeth Bandow
- Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, 44780 Bochum, Germany; (C.H.R.S.); (J.E.B.)
| | - Dirk Tischler
- Microbial Biotechnology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, 44780 Bochum, Germany
- Correspondence: (M.H.); (D.T.)
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10
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Cultivation dependent formation of siderophores by Gordonia rubripertincta CWB2. Microbiol Res 2020; 238:126481. [DOI: 10.1016/j.micres.2020.126481] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 03/31/2020] [Accepted: 04/15/2020] [Indexed: 11/24/2022]
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11
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Schwabe R, Senges CHR, Bandow JE, Heine T, Lehmann H, Wiche O, Schlömann M, Levicán G, Tischler D. Data on metal-chelating, -immobilisation and biosorption properties by Gordonia rubripertincta CWB2 in dependency on rare earth adaptation. Data Brief 2020; 31:105739. [PMID: 32490092 PMCID: PMC7262544 DOI: 10.1016/j.dib.2020.105739] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Accepted: 05/15/2020] [Indexed: 12/04/2022] Open
Abstract
Recent studies have shown that the metal adaptation of Actinobacteria offers a rich source of metal inducible environmentally relevant bio-compounds and molecules. These interact through biosorption towards the unique cell walls or via metal chelating activity of metallophors with trace elements, heavy metals and even with lanthanides to overcome limitations and toxic concentrations. Herein, the purpose is to investigate the adaptation potential of Gordonia rubripertincta CWB2 in dependence of the rare earths and to determine if we can utilize promising metallophore metal affinities for metal separation from aquatic solutions. For details on data interpretation and applicability of siderophores we refer to the related article entitled "Cultivation dependent formation of siderophores by Gordonia rubripertincta CWB2" [1]. The respective workflow comprises a metal adaptation method to demonstrate effects on bacterial growth, pH, metallophore production, and metabolic change. All this was evaluated by LC-MS/MS and effects on biosorption of rare earths was verified by ICP-MS. Furthermore, we were able to carry out batch metal adsorption and desorption studies of metallophores entrapped in inorganic polymers of tetramethoxysilane (TMOS) to determine metal chelating capacities and selective enrichment effects from model solutions. The adaptation potential of strain CWB2 at increased erbium and manganese concentrations was verified by increased chelating activity on agar plates, in liquid assays and demonstrated by the successful enrichment of erbium by metallophore-functionalized TMOS-polymers from an aquatic model solution. Furthermore, the number of detected compounds in dependency of rare earths differ in spectral counts and diversity compared to the wild type. Finally, the biosorption of rare earths for the selected adaptation was increased significantly up to 2-fold compared to the wild-type. Overall a holistic approach to metal stress was utilised, integrating a bacterial erbium adaptation, metal chelating, biosorption of lanthanides and immobilization as well as enrichment of metals using metallophore functionalized inorganic TMOS polymers for separation of metals from aquatic model solutions.
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Affiliation(s)
- Ringo Schwabe
- Institute of Biosciences, Environmental Microbiology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599 Freiberg, Germany
- Institute of Biosciences, Biology and Ecology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599 Freiberg, Germany
| | - Christoph Helmut Rudi Senges
- Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Universitätsstraße 150, 44801 Bochum, Germany
| | - Julia Elisabeth Bandow
- Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Universitätsstraße 150, 44801 Bochum, Germany
| | - Thomas Heine
- Institute of Biosciences, Environmental Microbiology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599 Freiberg, Germany
| | - Henry Lehmann
- Institute of Informatic, TU Bergakademie Freiberg, Bernhard-von-Cotta Straße 2, 09599 Freiberg, Germany
| | - Oliver Wiche
- Institute of Biosciences, Biology and Ecology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599 Freiberg, Germany
| | - Michael Schlömann
- Institute of Biosciences, Environmental Microbiology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599 Freiberg, Germany
| | - Gloria Levicán
- Laboratorio de Microbiología Básica y Aplicada, Facultad de Química y Biología, Universidad de Santiago, Chile
| | - Dirk Tischler
- Institute of Biosciences, Environmental Microbiology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599 Freiberg, Germany
- Microbial Biotechnology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, Universitätsstraße 150, 44780 Bochum, Germany
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Hofmann M, Retamal-Morales G, Tischler D. Metal binding ability of microbial natural metal chelators and potential applications. Nat Prod Rep 2020; 37:1262-1283. [DOI: 10.1039/c9np00058e] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Metallophores can chelate many different metal and metalloid ions next to iron, make them valuable for many applications.
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Affiliation(s)
- Marika Hofmann
- Institute of Biosciences
- Chemistry and Physics Faculty
- TU Bergakademie Freiberg
- 09599 Freiberg
- Germany
| | - Gerardo Retamal-Morales
- Laboratorio de Microbiología Básica y Aplicada
- Facultad de Química y Biología
- Universidad de Santiago de Chile
- Santiago
- Chile
| | - Dirk Tischler
- Microbial Biotechnology
- Ruhr-Universität Bochum
- 44780 Bochum
- Germany
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Proença DN, Heine T, Senges CHR, Bandow JE, Morais PV, Tischler D. Bacterial Metabolites Produced Under Iron Limitation Kill Pinewood Nematode and Attract Caenorhabditis elegans. Front Microbiol 2019; 10:2166. [PMID: 31608025 PMCID: PMC6761702 DOI: 10.3389/fmicb.2019.02166] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2019] [Accepted: 09/03/2019] [Indexed: 11/19/2022] Open
Abstract
Pine Wilt Disease (PWD) is caused by Bursaphelenchus xylophilus, the pinewood nematode, and affects several species of pine trees worldwide. The ecosystem of the Pinus pinaster trees was investigated as a source of bacteria producing metabolites affecting this ecosystem: P. pinaster trees as target-plant, nematode as disease effector and its insect-vector as shuttle. For example, metals and metal-carrying compounds contribute to the complex tree-ecosystems. This work aimed to detect novel secondary metabolites like metallophores and related molecules produced under iron limitation by PWD-associated bacteria and to test their activity on nematodes. After screening 357 bacterial strains from Portugal and United States, two promising metallophore-producing strains Erwinia sp. A41C3 and Rouxiella sp. Arv20#4.1 were chosen and investigated in more detail. The genomes of these strains were sequenced, analyzed, and used to detect genetic potential for secondary metabolite production. A combinatorial approach of liquid chromatography-coupled tandem mass spectrometry (LC-MS) linked to molecular networking was used to describe these compounds. Two major metabolites were detected by HPLC analyses and described. One HPLC fraction of strain Arv20#4.1 showed to be a hydroxamate-type siderophore with higher affinity for chelation of Cu. The HPLC fraction of strain A41C3 with highest metal affinity showed to be a catecholate-type siderophore with higher affinity for chelation of Fe. LC-MS allowed the identification of several desferrioxamines from strain Arv20#4.1, in special desferrioxamine E, but no hit was obtained in case of strain A41C3 which might indicate that it is something new. Bacteria and their culture supernatants showed ability to attract C. elegans. HPLC fractions of those supernatant-extracts of Erwinia strain A41C3, enriched with secondary metabolites such as siderophores, were able to kill pinewood nematode. These results suggest that metabolites secreted under iron limitation have potential to biocontrol B. xylophilus and for management of Pine Wilt Disease.
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Affiliation(s)
- Diogo Neves Proença
- Department of Life Sciences and Laboratory of Environmental Microbiology of CEMMPRE, University of Coimbra, Coimbra, Portugal
| | - Thomas Heine
- Environmental Microbiology, TU Bergakademie Freiberg, Freiberg, Germany
| | - Christoph H. R. Senges
- Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany
| | - Julia E. Bandow
- Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany
| | - Paula V. Morais
- Department of Life Sciences and Laboratory of Environmental Microbiology of CEMMPRE, University of Coimbra, Coimbra, Portugal
| | - Dirk Tischler
- Environmental Microbiology, TU Bergakademie Freiberg, Freiberg, Germany
- Microbial Biotechnology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany
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Mandal SK, Ray R, González AG, Mavromatis V, Pokrovsky OS, Jana TK. State of rare earth elements in the sediment and their bioaccumulation by mangroves: a case study in pristine islands of Indian Sundarban. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019; 26:9146-9160. [PMID: 30715704 DOI: 10.1007/s11356-019-04222-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2018] [Accepted: 01/10/2019] [Indexed: 06/09/2023]
Abstract
The mangrove ecosystems are known to efficiently sequester trace metals both in sediments and plant biomass. However, less is known about the chemistry of rare earth elements (REE) in the coastal environments, especially in the world's largest mangrove province, the Sundarban. Here, the concentration of REE in the sediment and plant organs of eight dominant mangrove species (mainly Avicennia sp.) in the Indian Sundarban was measured to assess REE sources, distribution, and bioaccumulation state. Results revealed that light REE (LREE) were more concentrated than the heavy REE (HREE) (128-144 mg kg-1 and 12-15 mg kg-1, respectively) in the mangrove sediments, with a relatively weak positive europium anomaly (Eu/Eu* = 1.03-1.14) with respect to North American shale composite. The primary source of REE was most likely linked to aluminosilicate weathering of crustal materials, and the resultant increase in LREE in the detritus. Vertical distribution of REE in one of the long cores from Lothian Island was altered by mangrove root activity and dependent on various physicochemical properties in the sediment (e.g., Eh, pH, organic carbon, and phosphate). REE uptake by plants was higher in the below-ground parts than in the above-ground plant tissues (root = 3.3 mg kg-1, leaf + wood = 1.7 mg kg-1); however, their total concentration was much lower than in the sediment (149.5 mg kg-1). Species-specific variability in bioaccumulation factor and translocation factor was observed indicating different REE partitioning and varying degree of mangrove uptake efficiency. Total REE stock in plant (above + live below ground) was estimated to be 168 g ha-1 with LREE contributing ~ 90% of the stock. This study highlighted the efficiency of using REE as a biological proxy in determining the degree of bioaccumulation within the mangrove environment.
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Affiliation(s)
- Sanjay K Mandal
- Department of Marine Science, Calcutta University, Kolkata, 70019, India
- Department of Chemistry, Sundarban Hazi Desarat College, South 24 Parganas, Pathankhali, 743611, India
| | - Raghab Ray
- LEMAR (Laboratoire des Sciences de l'Environnement Marin), UMR 6539, (CNRS-UBO-IRD- IFREMER), 29280, Plouzané, France.
- Department of Chemical Oceanography, Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, 277-8564, Japan.
| | - Aridane G González
- LEMAR (Laboratoire des Sciences de l'Environnement Marin), UMR 6539, (CNRS-UBO-IRD- IFREMER), 29280, Plouzané, France
- Instituto de Oceanografía y Cambio Global, IOCAG, Universidad de Las Palmas de Gran Canaria, ULPGC, 35017, Las Palmas de Gran Canaria, Spain
| | | | - Oleg S Pokrovsky
- GET (Géosciences Environnement Toulouse) UMR 5563 CNRS, 31400, Toulouse, France
- BIO-GEO-CLIM Laboratory, Tomsk State University, Tomsk, Russia, 634050
- N. Laverov Federal Center for Integrated Arctic Research, IEPS, Russian Academy of Sciences, Arkhangelsk, Russia, 163000
| | - Tapan K Jana
- Department of Marine Science, Calcutta University, Kolkata, 70019, India
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Wiche O, Székely B, Moschner C, Heilmeier H. Germanium in the soil-plant system-a review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018; 25:31938-31956. [PMID: 30218330 DOI: 10.1007/s11356-018-3172-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2018] [Accepted: 09/06/2018] [Indexed: 04/15/2023]
Abstract
Germanium (Ge) is widespread in the Earth's crust. As a cognate element to silicon (Si), Ge shows very similar chemical characteristics. Recent use of Ge/Si to trace Si cycles and changes in weathering over time, growing demand for Ge as raw material, and consequently an increasing interest in Ge phytomining have contributed to a growing interest in this previously rather scarcely considered element in geochemical studies. This review deals with the distribution of Ge in primary minerals and surface soils as well as the factors influencing the mobility of Ge in soils including the sequestration of Ge in secondary mineral phases and soil organic matter. Furthermore, the uptake and accumulation of Ge in plants and effects of plant-soil relationships on the availability of Ge in soils and the biogeochemical cycling of Ge are discussed. The formation of secondary soil minerals and soil organic matter are of particular importance for the concentration of Ge in plant-available forms. The transfer from soil to plant is usually low and shows clear differences between species belonging to the functional groups of grasses and forbs. Possible uptake mechanisms in the rhizosphere are discussed. However, the processes that are involved in the formation of plant-available Ge pools in soils and consequently its biogeochemical cycling are not yet well understood. There is, therefore, a need for future studies on the uptake mechanisms and stoichiometry of Ge uptake under field conditions and plant-soil-microbe interactions in the rhizosphere as well as the chemical speciation in different plant parts.
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Affiliation(s)
- Oliver Wiche
- Institute for Biosciences, Biology/Ecology Group, TU Bergakademie Freiberg, Freiberg, Germany.
- Interdisciplinary Environmental Centre, TU Bergakademie Freiberg, Freiberg, Germany.
| | - Balázs Székely
- Interdisciplinary Environmental Centre, TU Bergakademie Freiberg, Freiberg, Germany
- Department of Geophysics and Space Science, Eötvös University, Budapest, Hungary
- Department of Geodesy and Geoinformation, Vienna University of Technology, Vienna, Austria
| | - Christin Moschner
- Institute for Biosciences, Biology/Ecology Group, TU Bergakademie Freiberg, Freiberg, Germany
| | - Hermann Heilmeier
- Institute for Biosciences, Biology/Ecology Group, TU Bergakademie Freiberg, Freiberg, Germany
- Interdisciplinary Environmental Centre, TU Bergakademie Freiberg, Freiberg, Germany
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Biodegradation of High Concentrations of Aliphatic Hydrocarbons in Soil from a Petroleum Refinery: Implications for Applicability of New Actinobacterial Strains. APPLIED SCIENCES-BASEL 2018. [DOI: 10.3390/app8101855] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
At present, there is great demand for new resistant and metabolically active strains of biodegrading bacteria capable of degrading high concentrations of petroleum pollutants. In this study, we undertook a series of pot-based biodegradation experiments on soil from a petroleum refinery lagoon heavily polluted with aliphatic hydrocarbons (81.6 ± 2.5 g·kg−1 dry weight) and metals. Periodical bioaugmentation with either a mixture of isolated degraders identified as Bacillus sp. and Ochrobactrum sp. or biostimulation with nutrient medium, singly or in combination, did not produce any significant decrease in hydrocarbons, even after 455 days. Inoculation with Gordonia rubripertincta CWB2 and Rhodococcus erythropolis S43 in iron-limited media, however, resulted in a significant decrease in hydrocarbons 45 days after bioaugmentation. These actinobacterial strains, therefore, show significant potential for bioremediation of such highly polluted soils.
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Schwabe R, Anke MK, Szymańska K, Wiche O, Tischler D. Analysis of desferrioxamine-like siderophores and their capability to selectively bind metals and metalloids: development of a robust analytical RP-HPLC method. Res Microbiol 2018; 169:598-607. [PMID: 30138722 DOI: 10.1016/j.resmic.2018.08.002] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2018] [Revised: 08/06/2018] [Accepted: 08/08/2018] [Indexed: 10/28/2022]
Abstract
The Actinobacterium Gordonia rubripertincta CWB2 (DSM 46758) produces hydroxamate-type siderophores (188 mg L-1) under iron limitation. Analytical reversed-phase HPLC allowed determining a single peak of ferric iron chelating compounds from culture broth which was confirmed by the Fe-CAS assay. Elution profile and its absorbance spectrum were similar to those of commercial (des)ferrioxamine B which was used as reference compound. This confirms previously made assumptions and shows for the first time that the genus Gordonia produces desferrioxamine-like siderophores. The reversed-phase HPLC protocol was optimized to separate metal-free and -loaded oxamines. This allowed to determine siderophore concentrations in solutions as well as metal affinity. The metal loading of oxamines was confirmed by ICP-MS. As a result, it was demonstrated that desferrioxamine prefers trivalent metal ions (Fe3+ > Ga3+ > V3+ > Al3+) over divalent ones. In addition, we aimed to show the applicability of the newly established reversed-phase HPLC protocol and to increase the re-usability of desferrioxamines as metal chelators by immobilization on mesocellular silica foam carriers. The siderophores obtained from strain CWB2 and commercial desferrioxamine B were successfully linked to the carrier with a high yield (up to 95%) which was verified by the HPLC method. Metal binding studies demonstrated that metals can be bound to non-immobilized and to the covalently linked desferrioxamines, but also to the carrier material itself. The latter was found to be unspecific and, therefore, the effect of the carrier material remains a field of future research. By means of a reversed CAS assay for various elements (Nd, Gd, La, Er, Al, Ga, V, Au, Fe, As) it was possible to demonstrate improved Ga3+- and Nd3+-binding to desferrioxamine loaded mesoporous silica carriers. The combination of the robust reversed-phase HPLC method and various CAS assays provides new avenues to screen for siderophore producing strains, and to control purification and immobilization of siderophores.
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Affiliation(s)
- Ringo Schwabe
- Institute of Biological Sciences, Environmental Microbiology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany.
| | - Marlene Kirstin Anke
- Institute of Biological Sciences, Environmental Microbiology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany.
| | - Katarzyna Szymańska
- Department of Chemical Engineering and Process Design, Silesian University of Technology, Ks. M. Strzody 7, 44-100, Gliwice, Poland.
| | - Oliver Wiche
- Institute of Biological Sciences, Biology and Ecology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany.
| | - Dirk Tischler
- Institute of Biological Sciences, Environmental Microbiology Group, TU Bergakademie Freiberg, Leipziger Straße 29, 09599, Freiberg, Germany; Microbial Biotechnology, Ruhr University Bochum, Universitätsstr. 150, 44801, Bochum, Germany.
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18
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Mleczek P, Borowiak K, Budka A, Niedzielski P. Relationship between concentration of rare earth elements in soil and their distribution in plants growing near a frequented road. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018; 25:23695-23711. [PMID: 29872986 PMCID: PMC6096544 DOI: 10.1007/s11356-018-2428-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Accepted: 05/28/2018] [Indexed: 04/16/2023]
Abstract
Rare earth elements (REEs) are a group of elements whose concentration in numerous environmental matrices continues to increase; therefore, the use of biological methods for their removal from soil would seem to be a safe and reasonable approach. The aim of this study was to estimate the phytoextraction efficiency and distribution of light and heavy (LREEs and HREEs) rare earth elements by three herbaceous plant species: Artemisia vulgaris L., Taraxacum officinale F.H. Wigg. and Trifolium repens L., growing at a distance of 1, 10, and 25 m from the edge of a frequented road in Poland. The concentration of REEs in soil and plants was highly correlated (r > 0.9300), which indicates the high potential of the studied plant species to phytoextraction of these elements. The largest proportion of REEs was from the group of LREEs, whereas HREEs comprised only an inconsiderable portion of the REEs group. The dominant elements in the group of LREEs were Nd and Ce, while Er was dominant in the HREEs group. Differences in the amounts of these elements influenced the total concentration of LREEs, HREEs, and finally REEs and their quantities which decreased with distance from the road. According to the Friedman rank sum test, significant differences in REEs concentration, mainly between A. vulgaris L., and T. repens L. were observed for plants growing at all three distances from the road. The same relation between A. vulgaris L. and T. officinale was observed. The efficiency of LREEs and REEs phytoextraction in the whole biomass of plants growing at all distances from the road was A. vulgaris L. > T. officinale L. > T. repens L. For HREEs, the same relationship was recorded only for plants growing at the distance 1 m from the road. Bioconcentration factor (BCF) values for LREEs and HREEs were respectively higher and lower than 1 for all studied plant species regardless of the distance from the road. The studied herbaceous plant species were able to effectively phytoextract LREEs only (BCF > 1); therefore, these plants, which are commonly present near roads, could be a useful tool for removing this group of REEs from contaminated soil.
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Affiliation(s)
- Patrycja Mleczek
- Department of Ecology and Environmental Protection, Poznan University of Life Sciences, Piątkowska 94C, 60-649, Poznań, Poland.
| | - Klaudia Borowiak
- Department of Ecology and Environmental Protection, Poznan University of Life Sciences, Piątkowska 94C, 60-649, Poznań, Poland
| | - Anna Budka
- Department of Mathematical and Statistical Methods, Poznan University of Life Sciences, Poznań, Poland
| | - Przemysław Niedzielski
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Umultowska 89B, 61-614, Poznań, Poland
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Abstract
INTRODUCTION The emergence of multidrug-resistant bacterial pathogens has led to a global public health emergency and novel therapeutic options and drug-delivery systems are urgently needed. Cefiderocol is a siderophore cephalosporin antibiotic that has recently been developed to combat a variety of bacterial pathogens, including β-lactam- and carbapenem-resistant organisms. AREAS COVERED This paper provides an overview of the mutational and plasmid-mediated mechanisms of β-lactam and carbapenem resistance, the biochemical pathways of siderophores in bacterial iron metabolism, and how cefiderocol may be able to provide better targeted antimicrobial therapy that escape these drug-resistant mechanisms. We also explore the pharmacokinetics of this new compound as well as results from preclinical and clinical studies. EXPERT OPINION There is an urgent need for novel antimicrobial agents to address the emergence of multidrug-resistant pathogens, which are an increasing cause of morbidity and mortality worldwide. Our understanding of multidrug-resistance and bacterial biochemical pathways continues to expand, and the development of cefiderocol specifically targeting siderophore-mediated iron transport shows potential in escaping mechanisms of drug resistance. Cefiderocol, which demonstrates a favorable side effect profile, has the potential to become first-line therapy for our most aggressive and lethal multidrug-resistant Gram-negative pathogens.
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Affiliation(s)
- Justin J Choi
- a Department of Medicine , Weill Cornell Medical College , New York , NY , USA
| | - Matthew W McCarthy
- b Division of General Internal Medicine , New York-Presbyterian Hospital , New York , NY , USA
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