Ecology. Aquaculture--a gateway for exotic species

Taming the terminological tempest in invasion science

Standardised terminology in science is important for clarity of interpretation and communication. In invasion science - a dynamic and rapidly evolving discipline - the proliferation of technical terminology has lacked a standardised framework for its development. The result is a convoluted and inconsistent usage of terminology, with various discrepancies in descriptions of damage and interventions. A standardised framework is therefore needed for a clear, universally applicable, and consistent terminology to promote more effective communication across researchers, stakeholders, and policymakers. Inconsistencies in terminology stem from the exponential increase in scientific publications on the patterns and processes of biological invasions authored by experts from various disciplines and countries since the 1990s, as well as publications by legislators and policymakers focusing on practical applications, regulations, and management of resources. Aligning and standardising terminology across stakeholders remains a challenge in invasion science. Here, we review and evaluate the multiple terms used in invasion science (e.g. 'non-native', 'alien', 'invasive' or 'invader', 'exotic', 'non-indigenous', 'naturalised', 'pest') to propose a more simplified and standardised terminology. The streamlined framework we propose and translate into 28 other languages is based on the terms (i) 'non-native', denoting species transported beyond their natural biogeographic range, (ii) 'established non-native', i.e. those non-native species that have established self-sustaining populations in their new location(s) in the wild, and (iii) 'invasive non-native' - populations of established non-native species that have recently spread or are spreading rapidly in their invaded range actively or passively with or without human mediation. We also highlight the importance of conceptualising 'spread' for classifying invasiveness and 'impact' for management. Finally, we propose a protocol for classifying populations based on (i) dispersal mechanism, (ii) species origin, (iii) population status, and (iv) impact. Collectively and without introducing new terminology, the framework that we present aims to facilitate effective communication and collaboration in invasion science and management of non-native species.

Anthropogenic Vector Ecology and Management to Combat Disease Spread in Aquaculture

Anthropogenic vectors (transfer mechanisms) can facilitate the introduction and spread of aquatic disease in marine farming regions. Preventing or interrupting pathogen transfers associated with movements of these vectors is key to ensuring productivity and profitability of aquaculture operations. However, practical methods to identify and manage vector risks are lacking. We developed a risk analysis framework to identify disease risks and management gaps associated with anthropogenic vector movements in New Zealand's main aquaculture sectors - Chinook salmon (Oncorhynchus tshawytscha), green-lipped mussels (Perna canaliculus), and Pacific oysters (Crassostrea gigas). Vectors within each sector were identified and assigned categorical risk scores for (i) movement characteristics (size, frequency, likelihood of return to sea), (ii) biological association with pathogens (entrainment potential, contribution to previous aquaculture disease outbreaks) and (iii) available best practice biosecurity methods and tools, to inform unmitigated and mitigated risk rankings. Thirty-one vectors were identified to operate within the national network and association with livestock was found to be a primary driver of vector risk rankings. Movements of live growing stock and culture substrates (e.g., mussel ropes) in shellfish farming had high-risk vector profiles that are logistically challenging to address, while vessel vectors were identified as the salmon farming sector's priority. The framework and rankings can be used to inform both research and management priorities in aquaculture and other primary production systems, including risk validation, vector roles in disease epidemiology, compliance with permit conditions, policy development, and treatment options.

Environmental DNA reveals patterns of biological invasion in an inland sea

Non-native species have the potential to cause ecological and economic harm to coastal and estuarine ecosystems. Understanding which habitat types are most vulnerable to biological invasions, where invasions originate, and the vectors by which they arrive can help direct limited resources to prevent or mitigate ecological and socio-economic harm. Information about the occurrence of non-native species can help guide interventions at all stages of invasion, from first introduction, to naturalization and invasion. However, monitoring at relevant scales requires considerable investment of time, resources, and taxonomic expertise. Environmental DNA (eDNA) metabarcoding methods sample coastal ecosystems at broad spatial and temporal scales to augment established monitoring methods. We use COI mtDNA eDNA sampling to survey a diverse assemblage of species across distinct habitats in the Salish Sea in Washington State, USA, and classify each as non-native, native, or indeterminate in origin. The non-native species detected include both well-documented invaders and species not previously reported within the Salish Sea. We find a non-native assemblage dominated by shellfish and algae with native ranges in the temperate western Pacific, and find more-retentive estuarine habitats to be invaded at far higher levels than better-flushed rocky shores. Furthermore, we find an increase in invasion level with higher water temperatures in spring and summer across habitat types. This analysis contributes to a growing understanding of the biotic and abiotic factors that influence invasion level, and underscores the utility of eDNA surveys to monitor biological invasions and to better understand the factors that drive these invasions.

Complex drivers of invasive macroalgae boom and bust in Kāne'ohe Bay, Hawai'i

Invasive macroalgae Eucheuma sp. and Kappaphycus spp. (E/K) became a dominant benthic feature in Kāne'ohe Bay throughout the past four decades - occurring on up to 74 ha of reef area and growing up to three meters thick, which prompted intensive management action. In 2013, E/K cover began decreasing at managed and unmanaged sites. This study examined the extent and timing of the E/K decline and evaluated environmental and ecological drivers beyond management contributing to the decline. E/K continued to recede into 2017 and remains sparse in Kāne'ohe Bay today. Increasing over the sampling period, herbivore biomass was negatively correlated with E/K cover, and other significant, non-linear relationships emerged between E/K cover and coral cover, sea surface temperature, wind, and rainfall. This study uncovers several possible mechanisms explaining a boom and bust in E/K abundance, emphasizes the importance of herbivory, and highlights the resilience of coral reefs in Kāne'ohe Bay.

New Record of Dendronephthya sp. (Family: Nephtheidae) from Mediterranean Israel: Evidence for Tropicalization?

Bio-invasions have the potential to provoke cascade effects that can disrupt natural ecosystems and cause ecological regime shifts. The Mediterranean Sea is particularly prone to bio-invasions as the changing water conditions, evoked by climate change, are creating advantageous conditions for Lessepsian migrants from the Red Sea. Recently, in May 2023, a new alien species was documented in the Mediterranean Sea-a soft coral of the genus Dendronephthya. This discovery was made by divers conducting 'Long-Term Ecological Research' surveys, along the coast of Israel, at a depth of 42 m. Genetic and morphological testing suggest that the species identity may be Dendronepthya hemprichi, an Indo-Pacific coral, common in the Red Sea. According to life history traits of this species, such as accelerated attachment to available surfaces and fast growth, we expect it to rapidly expand its distribution and abundance across the Mediterranean Sea.

Searching for a Home Port in a Polyvectic World: Molecular Analysis and Global Biogeography of the Marine Worm Polydora hoplura (Annelida: Spionidae)

The spionid polychaete Polydora hoplura Claparède, 1868 is a shell borer widely occurring across the world and considered introduced in many areas. It was originally described in the Gulf of Naples, Italy. Adult diagnostic features are the palps with black bands, prostomium weakly incised anteriorly, caruncle extending to the end of chaetiger 3, short occipital antenna, and heavy sickle-shaped spines in the posterior notopodia. The Bayesian inference analysis of sequence data of four gene fragments (2369 bp in total) of the mitochondrial 16S rDNA, nuclear 18S, 28S rDNA and Histone 3 has shown that worms with these morphological features from the Mediterranean, northern Europe, Brazil, South Africa, Australia, Republic of Korea, Japan and California are genetically identical, form a well-supported clade, and can be considered conspecific. The genetic analysis of a 16S dataset detected 15 haplotypes of this species, 10 of which occur only in South Africa. Despite the high genetic diversity of P. hoplura in South Africa, we tentatively propose the Northwest Pacific, or at the most the Indo-West Pacific, as its home region, not the Atlantic Ocean or the Eastern Pacific Ocean. The history of the discovery of P. hoplura around the world appears to be intimately linked to global shipping commencing in the mid-19th century, followed by the advent of the global movement of commercial shellfish (especially the Pacific oyster Magallana gigas) in the 20th century, interlaced with continued, complex dispersal by vessels and aquaculture. Given that P. hoplura has been detected in only a few of the 17 countries where Pacific oysters have been established, we predict that it may already be present in many more regions. As global connectivity through world trade continues to increase, it is likely that novel populations of P. hoplura will continue to emerge.

On the wrong track: Sustainable and low-emission blue food diets to mitigate climate change

Seafood and other aquatic food (blue food) are often advocated as sustainable protein sources crucial to meeting global food demand. Consumption choices allow citizens to take actions that reduce the environmental burden of food production and tackle the climate crisis. Here we used a high-resolution Spanish national-level dataset collected from 12,500 households between 1999 and 2021 as a study case to assess trends in blue food consumption concerning sources, types and stressors resulting from their production. By aggregating species groups according to source, we found an overall reduction in the consumption of most wild species. For farmed species, we found a pronounced increase in the consumption of carnivorous fish and an overall decrease in low trophic-level species consumption, such as bivalves. Using published studies, we estimated greenhouse gases, nitrogen, and phosphorus emissions to assess trends in environmental footprint. Low performance was associated with the consumption of high trophic-level species intensively farmed in distant regions, such as carnivorous fish, due to high stressor emissions related to their production and transport. Across all groups, consumption of locally farmed bivalves conduced to the lowest stressor emissions, providing an example of ‘net-zero' blue food. Our analysis identified historical trends in the environmental footprint of blue food consumption and consumers' choices that promote environmentally sustainable diets. It also highlights vast differences in the ecological footprint associated with the consumption of aquaculture-sourced protein. Based on our assessment, we recommend refocusing consumption patterns toward farmed species with small environmental footprints, such as locally produced low trophic-level species, and implementing policies that increase consumers' environmental awareness and minimize food production systems' footprints. Considering global blue food demand is predicted to nearly double by mid-century, consumers' choices can significantly impact sustainable production practices and mitigate climate change.

Toward integrated pest management in bivalve aquaculture

Pests of bivalve aquaculture are a challenging problem that can reduce productivity, profitability and sustainability. A range of pest management approaches have been developed for bivalve aquaculture, but a general absence of guiding frameworks has limited the scale and permanency of implementation. Applying principles of 'integrated pest management' (IPM) could change this paradigm to improve economic and environmental outcomes. We reviewed existing research and tools for pest management in bivalve aquaculture, with studies grouped under five pillars of IPM: pest ecology (25 studies), bioeconomic cost-benefits (4 studies), continual monitoring (17 studies), proactive prevention (32 studies) and reactive control (65 studies). This body of knowledge, along with insights from terrestrial agriculture, provide a strong foundation for developing and implementing IPM in bivalve aquaculture. For example, IPM principles have been applied by a regional collective of oyster farmers in the US Pacific Northwest to optimize pesticide application and search for other options to control problematic burrowing shrimps. However, IPM has not yet been broadly applied in aquaculture, and data gaps and barriers to implementation need to be addressed. Priorities include establishing meaningful pest-crop bioeconomic relationships for various bivalve farming systems and improving the efficacy and operational scale of treatment approaches. An IPM framework also could guide potential step-change improvements through directing selective breeding for resistance to pests, development of bespoke chemical control agents, applying emerging technologies for remote surveillance and farm management, and regional alignment of management interventions. © 2022 Society of Chemical Industry.

Harbours as unique environmental sites of multiple anthropogenic stressors on fish hormonal systems

Fish development and acclimation to environmental conditions are strongly mediated by the hormonal endocrine system. In environments contaminated by anthropogenic stressors, hormonal pathway alterations can be detrimental for growth, survival, fitness, and at a larger scale for population maintenance. In the context of increasingly contaminated marine environments worldwide, numerous laboratory studies have confirmed the effect of one or a combination of pollutants on fish hormonal systems. However, this has not been confirmed in situ. In this review, we explore the body of knowledge related to the influence of anthropogenic stressors disrupting fish endocrine systems, recent advances (focusing on thyroid hormones and stress hormones such as cortisol), and potential research perspectives. Through this review, we highlight how harbours can be used as "in situ laboratories" given the variety of anthropogenic stressors (such as plastic, chemical, sound, light pollution, and invasive species) that can be simultaneously investigated in harbours over long periods of time.

Mosaic or melting pot: The use of monogeneans as a biological tag and magnifying glass to discriminate introduced populations of Nile tilapia in sub-Saharan Africa

The origin of introduced Nile tilapia stocks in sub-Saharan Africa is largely unknown. In this study, the potential of monogeneans as a biological tag and magnifying glass is tested to reveal their hosts' stocking history. The monogenean gill community of different Nile tilapia populations in sub-Saharan Africa was explored, and a phylogeographic analysis was performed based on the mitogenomes of four dactylogyrid species (Cichlidogyrus halli, C. sclerosus, C. thurstonae, and Scutogyrus longicornis). Our results encourage the use of dactylogyrids as biological tags. The magnifying glass hypothesis is only confirmed for C. thurstonae, highlighting the importance of the absence of other potential hosts as prerequisites for a parasite to act as a magnifying glass. With the data generated here, we are the first to extract mitogenomes from individual monogeneans and to perform an upscaled survey of the comparative phylogeography of several monogenean species with unprecedented diagnostic resolution.

Population genomics of introduced Nile tilapia Oreochromis niloticus (Linnaeus, 1758) in the Democratic Republic of the Congo: Repeated introductions since colonial times with multiple sources

During colonial times, Nile tilapia Oreochromis niloticus (Linnaeus, 1758) was introduced into non-native parts of the Congo Basin (Democratic Republic of the Congo, DRC) for the first time. Currently, it is the most farmed cichlid in the DRC, and is present throughout the Congo Basin. Although Nile tilapia has been reported as an invasive species, documentation of historical introductions into this basin and its consequences are scant. Here, we study the genetic consequences of these introductions by genotyping 213 Nile tilapia from native and introduced regions, focusing on the Congo Basin. Additionally, 48 specimens from 16 other tilapia species were included to test for hybridization. Using RAD sequencing (27,611 single nucleotide polymorphisms), we discovered genetic admixture with other tilapia species in several morphologically identified Nile tilapia from the Congo Basin, reflecting their ability to interbreed and the potential threat they pose to the genetic integrity of native tilapias. Nile tilapia populations from the Upper Congo and those from the Middle-Lower Congo are strongly differentiated. The former show genetic similarity to Nile tilapia from the White Nile, while specimens from the Benue Basin and Lake Kariba are similar to Nile tilapia from the Middle-Lower Congo, suggesting independent introductions using different sources. We conclude that the presence of Nile tilapia in the Congo Basin results from independent introductions, reflecting the dynamic aquaculture history, and that their introduction probably leads to genetic interactions with native tilapias, which could lower their fitness. We therefore urge avoiding further introductions of Nile tilapia in non-native regions and to use native tilapias in future aquaculture efforts.

Advantage of Species Diversification to Facilitate Sustainable Development of Aquaculture Sector

Simple Summary

The aquaculture sector must be well-founded to undergo robust growth and sustainable development in the years ahead. Species diversity must reflect species compatibility and complementarity to manage the complexity in polyculture systems. There is a need for the implementation of innovative strategies that facilitate sustainable aquaculture development, enhance profitability, improve resilience, and support conservation and environmental protection. An aquaculture development scenario must look beyond the economic profitability and strategize aquatic food production systems to attain food and nutrition security and benefits for all stakeholders.

Abstract

Intensified agrochemical-based monoculture systems worldwide are under adoption to meet the challenge of human population growth and the ever-growing global demand for food. However, this path has been opposed and criticized because it involves overexploitation of land, monoculture of few species, excessive input of agrochemicals, and adverse impacts on human health and the environment. The wide diversity among polyculture systems practiced across the globe has created confusion over the priority of a single strategy towards sustainable aquaculture development and safer products. Herein, we highlight the significance of polyculture and integrated aquaculture practices in conveying the successful transition of the aquaculture industry towards sustainable development. So far, the established thought is that the precise selection of aquatic species and a focus on compatible and complementary species combinations are supposed to facilitate rapid progress in food production with more profitability and sustainability. Therefore, the advantages of species diversification are discussed from an ecological perspective to enforce aquaculture expansion. This account asserts that a diverse range of aquaculture practices can promote synergies among farmed species, enhance system resilience, enable conservation, decrease ecological footprints, and provide social benefits such as diversified income and local food security.

Biosecurity and the ornamental fish trade: A stakeholder perspective in England

The freshwater and marine ornamental fish industry is a primary route of hazard introduction and emergence, including aquatic animal diseases and non-native species. Prevention measures are key to reducing the risk of hazard incursion and establishment, but there is currently little understanding of the biosecurity practices and hazard responses implemented at post-border stages of the ornamental fish supply chain. This study addresses this knowledge gap, using questionnaires to collate information on actual biosecurity behaviours and hazard responses practised by ornamental fish retailers and hobbyist communities in England. Actual behaviours varied considerably within retailers and hobbyists, suggesting that reliance on preventative practices by individuals in the post-border stages of the ornamental fish supply chain is likely to be ineffective in minimizing the risk of hazard incursion and establishment. Resources should be allocated towards improving and enforcing robust pre- and at-border control measures, such as risk-based surveillance of ornamental fish imports at border controls. In addition, these findings should be used to implement targeted awareness-raising campaigns and help create directed training on biosecurity practices for individuals involved in the post-border stages of the ornamental supply chain.

Three reasons why expanded use of natural enemy solutions may offer sustainable control of human infections

1. Many infectious pathogens spend a significant portion of their life cycles in the environment or in animal hosts, where ecological interactions with natural enemies may influence pathogen transmission to people. Yet, our understanding of natural enemy opportunities for human disease control is lacking, despite widespread uptake and success of natural enemy solutions for pest and parasite management in agriculture. 2. Here we explore three reasons why conserving, restoring, or augmenting specific natural enemies in the environment could offer a promising complement to conventional clinical strategies to fight environmentally mediated pathogens and parasites. (1) Natural enemies of human infections abound in nature, largely understudied and undiscovered. (2) Natural enemy solutions could provide ecological options for infectious disease control where conventional interventions are lacking. And, (3) Many natural enemy solutions could provide important co-benefits for conservation and human well-being. 3. We illustrate these three arguments with a broad set of examples whereby natural enemies of human infections have been used or proposed to curb human disease burden, with some clear successes. However, the evidence base for most proposed solutions is sparse, and many opportunities likely remain undiscovered, highlighting opportunities for future research.

Introgression from farmed escapees affects the full life cycle of wild Atlantic salmon

After a half a century of salmon farming, we have yet to understand how the influx of genes from farmed escapees affects the full life history of Atlantic salmon (Salmo salar L.) in the wild. Using scale samples of over 6900 wild adult salmon from 105 rivers, we document that increased farmed genetic ancestry is associated with increased growth throughout life and a younger age at both seaward migration and sexual maturity. There was large among-population variation in the effects of introgression. Most saliently, the increased growth at sea following introgression declined with the population’s average growth potential. Variation at two major-effect loci associated with age at maturity was little affected by farmed genetic ancestry and could not explain the observed phenotypic effects of introgression. Our study provides knowledge crucial for predicting the ecological and evolutionary consequences of increased aquaculture production worldwide.

Non-Indigenous Species on Artificial Coastal Environments: Experimental Comparison between Aquaculture Farms and Recreational Marinas

Globally, there is growing concern regarding the effects of the increasing anthropogenic pressures in marine communities. Artificial structures such as marinas and aquaculture facilities serve as invasion hotspots; hence, monitoring fouling communities on these structures can be valuable for detecting new invasions. In the current study, 24 settlement PVC plates were deployed for three months to compare the recruitment ability of these two artificial environments along the south coast of the offshore island of Madeira (NE Atlantic). The results showed higher variations in the species richness between regions (SW vs. SE) than between artificial habitats (sea-cages vs. marinas), although the community composition differed. Cnidaria and Bryozoa were the most representative groups in the aquaculture systems, while Bryozoa and Chordata were in the marinas. A sum of 18 NIS was recorded for the study, accounting for between 21.88% and 54.84% of the total number of species in the aquaculture facilities and marinas, respectively. The higher NIS percentage from the marinas was even more explicit in the SE coast, where Cradoscrupocellaria bertholletii, Parasmittina alba, and Botrylloides niger distinctly dominated fouling populations. The results suggest that at least some particular NIS previously reported in the studied marinas successfully colonized sea-cages. Future assessments need to address the potential role of aquaculture facilities as drivers for the secondary spread of NIS. Additionally, two new records are considered for Madeira: Eudendrium capillare and Ericthonius punctatus.

Are non-indigenous species hitchhiking offshore farmed mussels? A biogeographic and functional approach

The epifauna associated to farmed mussels in southern Portugal coast was analysed, aiming at identifying the species with spreading potential through commercial transport. The presence of a relevant number of the species here found is not reported to at least one of the common mussel export/transposition countries. Indeed, important species biogeographic dissimilarities between the mussel farm area and the Greater North Sea and Western Mediterranean Sea sub-regions were detected, suggesting the potential transport of non-indigenous species (NIS) into other countries. Among them, fouling species such as the anemones Paractinia striata and Urticina felina, the acorn barnacles Balanus glandula and Balanus trigonus or the bryozoans Bugulina stolonifera and Schizoporella errata exhibit functional attributes that allow them to colonise and spread in new areas. This combined biogeographic and functional approach may contribute to clarify the role of aquaculture on the transport of NIS and to predict and prevent their spreading worldwide.

Expanded host and geographic range of tadpole associations with the Severe Perkinsea Infection group

Severe Perkinsea infection is an emerging disease of amphibians, specifically tadpoles. Disease presentation correlates with liver infections of a subclade of Perkinsea (Alveolata) protists, named Pathogenic Perkinsea Clade (PPC). Tadpole mortality events associated with PPC infections have been reported across North America, from Alaska to Florida. Here, we investigate the geographic and host range of PPC associations in seemingly healthy tadpoles sampled from Panama, a biogeographic provenance critically affected by amphibian decline. To complement this work, we also investigate a mortality event among Hyla arborea tadpoles in captive-bred UK specimens. PPC SSU rDNA was detected in 10 of 81 Panama tadpoles tested, and H. arborea tadpoles from the UK. Phylogenies of the Perkinsea SSU rDNA sequences demonstrate they are highly similar to PPC sequences sampled from mortality events in the USA, and phylogenetic analysis of tadpole mitochondrial SSU rDNA demonstrates, for the first time, PPC associations in diverse hylids. These data provide further understanding of the biogeography and host range of this putative pathogenic group, factors likely to be important for conservation planning.

The impact of aquaculture on the genetics and distribution of the onuphid annelid Diopatra biscayensis

AIM

Evolutionary history of natural populations can be confounded by human intervention such as the case of decorator worm species Diopatra (Onuphidae), which have a history of being transported through anthropogenic activities. Because they build tubes and act as ecosystem engineers, they can have a large impact on the overall ecosystem in which they occur. One conspicuous member, Diopatra biscayensis, which was only described in 2012, has a fragmented distribution that includes the Bay of Biscay and the Normanno-Breton Gulf in the English Channel. This study explores the origin of these worms in the Normanno-Breton region, which has been debated to either be the result of a historic range contraction from a relic continuous population or a more recent introduction.

LOCATION

Northeastern Atlantic, the Bay of Biscay, and the Normanno-Breton Gulf.

METHODS

We utilized a RAD-tag-based SNP approach to create a reduced genomic data set to recover fine-scale population structure and infer which hypothesis best describes the D. biscayensis biogeographic distribution. The reduced genomic data set was used to calculate standard genetic diversities and genetic differentiation statistics, and utilized various clustering analyses, including PCAs, DAPC, and admixture.

RESULTS

Clustering analyses were consistent with D. biscayensis as a single population spanning the Bay of Biscay to the Normanno-Breton Gulf in the English Channel, although unexpected genetic substructure was recovered from Arcachon Bay, in the middle of its geographic range. Consistent with a hypothesized introduction, the isolated Sainte-Anne locality in the Normanno-Breton Gulf was recovered to be a subset of the diversity found in the rest of the Bay of Biscay.

MAIN CONCLUSIONS

These results are congruent with previous simulations that did not support connectivity from the Bay of Biscay to the Normanno-Breton Gulf by natural dispersal. These genomic findings, with support from previous climatic studies, further support the hypothesis that D. biscayensis phylogeographic connectivity is the result of introductions, likely through the regions' rich shellfish aquaculture, and not of a historically held range contraction.

-Blue mussel (Mytilus spp.) cultivation in mesohaline eutrophied inner coastal waters: mitigation potential, threats and cost effectiveness

The EU-water framework directive (WFD) focuses on nutrient reductions to return coastal waters to the good ecological status. As of today, many coastal waters have reached a steady state of insufficient water quality due to continuous external nutrient inputs and internal loadings. This study focuses first on the current environmental status of mesohaline inner coastal waters to illustrate their needs of internal measures to reach demanded nutrient reductions and secondly, if mussel cultivation can be a suitable strategy to improve water quality. Therefore, nitrogen, phosphorus, chlorophyll a, and Secchi depth of nine mesohaline inner coastal waters in north east Germany were analyzed from 1990 to 2018. Two pilot mussel farms were used to evaluate their effectiveness as a mitigation measure and to estimate potential environmental risks, including the interactions with pathogenic vibrio bacteria. Further, estimated production and mitigation potential were used to assess economic profitability based on the sale of small sized mussels for animal feed and a compensation for nutrient mitigation. The compensation costs were derived from nutrient removal costs of a waste water treatment plant (WWTP). Results show that currently all nine water bodies do not reach the nutrient thresholds demanded by the WFD. However, coastal waters differ in nutrient pollution, indicating that some can reach the desired threshold values if internal measures are applied. The mitigation potential of mussel cultivation depends on the amount of biomass that is cultivated and harvested. However, since mussel growth is closely coupled to the salinity level, mussel cultivation in low saline environments leads to lower biomass production and inevitably to larger cultivation areas. If 50% of the case study area Greifswald Bay was covered with mussel farms the resulting nitrogen reduction would increase Secchi depth by 7.8 cm. However, high chlorophyll a values can hamper clearance rates (<20 mg m⁻³ = 0.43 l h⁻¹ dry weight g⁻¹) and therefore the mitigation potential. Also, the risk of mussel stock loss due to high summer water temperatures might affect the mitigation potential. The pilot farms had no significant effect on the total organic content of sediments beneath. However, increased values of Vibrio spp. in bio deposits within the pilot farm (1.43 10⁶ ± 1.10 10⁶CFU 100 ml⁻¹ (reference site: 1.04 10⁶ ± 1.45 10⁶ CFU 100 ml⁻¹) were measured with sediment traps. Hence, mussel farms might act as a sink for Vibrio spp. in systems with already high vibrio concentrations. However, more research is required to investigate the risks of Vibrio occurrence coupled to mussel farming. The economic model showed that mussel cultivation in environments below 12 PSU cannot be economic at current market prices for small size mussels and compensations based on nutrient removal cost of WWTPs.

Network connectivity of Minnesota waterbodies and implications for aquatic invasive species prevention

Connectivity between waterbodies influences the risk of aquatic invasive species (AIS) invasion. Understanding and characterizing the connectivity between waterbodies through high-risk pathways, such as recreational boats, is essential to develop economical and effective prevention intervention to control the spread of AIS. Fortunately, state and local watercraft inspection programs are collecting significant data that can be used to quantify boater connectivity. We created a series of predictive models to capture the patterns of boater movements across all lakes in Minnesota, USA. Informed by more than 1.3 million watercraft inspection surveys from 2014–2017, we simulated boater movements connecting 9182 lakes with a high degree of accuracy. Our predictive model accurately predicted 97.36% of the lake pairs known to be connected and predicted 91.01% of the lake pairs known not to be connected. Lakes with high degree and betweenness centrality were more likely to be infested with an AIS than lakes with low degree (p < 0.001) and centrality (p < 0.001). On average, infested lakes were connected to 1200 more lakes than uninfested lakes. In addition, boaters that visited infested lakes were more likely to visit other lakes, increasing the risk of AIS spread to uninfested lakes. The use of the simulated boater networks can be helpful for determining the risk of AIS invasion for each lake and for developing management tools to assist decision makers to develop intervention strategies.

Selection against individuals from genetic introgression of escaped farmed salmon in a natural population of Atlantic salmon

The viability of wild Atlantic salmon populations is threatened by genetic introgression from escaped farmed salmon. Farmed Atlantic salmon are genetically improved for important commercial traits and a life in captivity but are poorly adapted to the natural environment. The rate of gene flow from escaped farmed to wild salmon depends on their spawning success and on offspring survival at various life stages. We here investigate relative survival of introgressed juvenile Atlantic salmon (parr) in a river in northern Norway. The studied population has experienced genetic introgression from farmed salmon for about four generations (20 years). We followed two cohorts of parr from the year of hatching (0+) to the age of 2 years (2+). Farmed genetic introgression was quantified at the individual level and on a continuous scale using diagnostic SNPs. Population-level genetic introgression decreased from 0+ to 2+ by 64% (2011 cohort) and 37% (2013 cohort). This change was driven by a 70% (2011 cohort) and 49% (2013 cohort) lower survival from age 0+ to 2+ in introgressed parr compared to parr of wild origin. Our observations show that there is natural selection against genetic introgression with a potential cost of lower productivity.

Animal Harms and Food Production: Informing Ethical Choices

Simple Summary

Consideration of animal welfare in food choices has become an influential contemporary theme. Traditional animal welfare views about food have been largely restricted to direct and intentional harms to livestock in intensive animal agriculture settings. However, many harms to animals arising from diverse food production practices in the world are exerted indirectly and unintentionally and often affect wildlife. Here we apply a qualitative analysis of food production by considering the breadth of harms caused by different food production systems to wild as well as domestic animals. Production systems are identified that produce relatively few and relatively many harms. The ethical implications of these findings are discussed for consumers concerned with the broad animal welfare impacts of their food choices.

Abstract

Ethical food choices have become an important societal theme in post-industrial countries. Many consumers are particularly interested in the animal welfare implications of the various foods they may choose to consume. However, concepts in animal welfare are rapidly evolving towards consideration of all animals (including wildlife) in contemporary approaches such as “One Welfare”. This approach requires recognition that negative impacts (harms) may be intentional and obvious (e.g., slaughter of livestock) but also include the under-appreciated indirect or unintentional harms that often impact wildlife (e.g., land clearing). This is especially true in the Anthropocene, where impacts on non-human life are almost ubiquitous across all human activities. We applied the “harms” model of animal welfare assessment to several common food production systems and provide a framework for assessing the breadth (not intensity) of harms imposed. We considered all harms caused to wild as well as domestic animals, both direct effects and indirect effects. We described 21 forms of harm and considered how they applied to 16 forms of food production. Our analysis suggests that all food production systems harm animals to some degree and that the majority of these harms affect wildlife, not livestock. We conclude that the food production systems likely to impose the greatest overall breadth of harms to animals are intensive animal agriculture industries (e.g., dairy) that rely on a secondary food production system (e.g., cropping), while harvesting of locally available wild plants, mushrooms or seaweed is likely to impose the least harms. We present this conceptual analysis as a resource for those who want to begin considering the complex animal welfare trade-offs involved in their food choices.

Non-indigenous macroalgal species in coralligenous habitats of the Marine Protected Area Isole Ciclopi (Sicily, Italy)

Biological invasions are considered one of the main threats for biodiversity. In the last decades, more than 60 macroalgae have been introduced in the Mediterranean Sea, causing serious problems in coastal areas. Nevertheless, the impacts of alien macroalgae in deep subtidal systems have been poorly studied, especially in the coralligenous habitats of the eastern coast of Sicily (Italy). Therefore, within the framework of the programme “Progetto Operativo di Monitoraggio (P.O.M.)” of the EU Marine Strategy Framework Directive (MSFD), the aim of the present study was to gain knowledge on the alien macroalgae present in coralligenous habitats of the Marine Protected Area (MPA) Isole Ciclopi, along the Ionian coast of Sicily. By Remotely Operated Vehicle (ROV) videos and destructive samples analysed in the laboratory, five alien species were identified: Caulerpa cylindracea, Antithamnion amphigeneum, Asparagopsis armata, Bonnemaisonia hamifera, and Lophocladia lallemandii. Since A. amphigeneum was previously reported only in the western Mediterranean and Adriatic Sea, the present report represents the first record of this species in the eastern Mediterranean. The ROV surveys showed that the alien species do not have a high coverage and do not appear to be invasive in the coralligenous area of the MPA. Since ocean temperatures are predicted to increase as climate change continues and alien species are favoured by warming of the Mediterranean Sea, the risk of biotic homogenisation caused by the spread of alien species is realistic. Therefore, further studies are needed to assess the incidence and invasiveness of alien species in phytobenthic assemblages of coralligenous in the MPA.

Non-indigenous species in marine and coastal habitats of the South China Sea

The South China Sea (SCS) sustains and is a regional center of high marine and coastal biodiversity. It is also one of the most important mariculture and marine fisheries regions in the world. Many non-indigenous species (NIS) were introduced into the SCS as artifacts of increasing mariculture production and fishery harvests. Little information exists about NIS in the SCS. In this study, research examining NIS and their threats in the SCS are reviewed. Current NIS conditions assessed include their status, threat to native biodiversity, contribution to mariculture and fisheries harvest, management, and the need for future research in specific areas are identified. A total of 90 NIS including 17 algae, 6 vascular plants, 3 bryozoans, 23 molluscs, 6 crustacea, 3 ascidians, and 32 fishes were introduced into the SCS from 1600 to the present. The primary pathways of introduction are through aquaculture, followed by shipping, ecological restoration, and biocontrol. The main introduced country is China. Some NIS have caused negative impacts on the environment and economy. Some NIS are potential threats to humans as well as biodiversity in the SCS. More research focused upon monitoring and managing NIS in the SCS is needed.

A multiregional assessment of transnational pathways of introduction

Information on the pathways by which alien taxa are introduced to new regions is vital for prioritising policy and management responses to invasions. However, available datasets are often compiled using disparate methods, making comparison and collation of pathway data difficult. Using a standardised framework for recording and categorising pathway data can help to rectify this problem and provide the information necessary to develop indicators for reporting on alien introductions. We combine the Convention on Biological Diversity’s Pathways Categorisation Scheme (CPC) with data compiled by the Invasive Species Specialist Group (ISSG) to report on multiregional trends on alien introduction pathways over the past 200+ years. We found a significant increase in the documented number of multiregional alien introduction events across all pathways of the CPC’s three hierarchical levels. The ‘escape’ pathway is the most common documented pathway used by alien taxa. Transport stowaways via shipping-related pathways are a rapidly increasing contribution to alien introductions. Most alien introduction events were of unknown pathway origin, highlighting the challenge of information gaps in pathway data and reiterating the need for standardised information-gathering practices. Combining the CPC framework with alien introduction pathways data will standardise pathway information and facilitate the development of global indicators of trends in alien introductions and the pathways they use. These indicators have the potential to inform policy and management strategies for preventing future biological invasions and can be downscaled to national and regional levels that are applicable across taxa and ecosystems.

Intentions to Consume Sustainably Produced Fish: The Moderator Effects of Involvement and Environmental Awareness

The purpose of this study is to apply the conceptual framework of the theory of planned behavior (TPB) to explain the consumption of sustainable produced fish in Sweden. We seek to understand the moderating role of food product involvement and environmental awareness as extensions of traditional constructs such as attitudes, social norms, and perceived behavioral control. The data were derived from a representative sample of 1974 Swedish consumers. Structural equation modeling was applied to test the relationships between constructs and evaluate the reliability and the validity of the constructs. Attitudes had a significantly positive effect on intention to consume fish in general and sustainably produced fish in particular. Social norms had significantly positive effect on intention to consume fish in general, but no effect on intention to consume sustainably produced fish. Behavioral control had no effect on behavioral intention. Interestingly, involvement negatively moderated the effect of attitudes on both intention to consume more fish and to consume more sustainably produced fish. Environmental awareness also negatively moderated the effect of attitudes on intention to consume more sustainably produced fish. It seems that attempts to create food product involvement and environmental awareness among consumers may have the opposite effect—a boomerang effect—than what conventional wisdom and much of the research on fish consumption indicates. Theoretical and practical implications of the findings are discussed.

Microbiome Variability across the Native and Invasive Ranges of the Ascidian Clavelina oblonga

Ascidians are prolific colonizers of new environments and possess a range of well-studied features that contribute to their successful spread, but the role of their symbiotic microbial communities in their long-term establishment is mostly unknown. In this study, we utilized next-generation amplicon sequencing to provide a comprehensive description of the microbiome in the colonial ascidian Clavelina oblonga and examined differences in the composition, diversity, and structure of symbiont communities in the host's native and invasive ranges. To identify host haplotypes, we sequenced a fragment of the mitochondrial gene cytochrome c oxidase subunit I (COI). C. oblonga harbored a diverse microbiome spanning 42 bacterial and three archaeal phyla. Colonies in the invasive range hosted significantly less diverse symbiont communities and exhibited lower COI haplotype diversity than colonies in the native range. Differences in microbiome structure were also detected across colonies in the native and invasive range, driven largely by novel bacteria representing symbiont lineages with putative roles in nitrogen cycling. Variability in symbiont composition was also observed among sites within each range. Together, these data suggest that C. oblonga hosts a dynamic microbiome resulting from (i) reductions in symbiont diversity due to founder effects in host populations and (ii) environmental selection of symbiont taxa in response to new habitats within a range. Further investigation is required to document the mechanisms behind these changes and to determine how changes in microbiome structure relate to holobiont function and the successful establishment of C. oblonga worldwide.IMPORTANCE Nonnative species destabilize coastal ecosystems and microbial symbionts may facilitate their spread by enhancing host survival and fitness. However, we know little of the microorganisms that live inside invasive species and whether they change as the host spreads to new areas. In this study, we investigated the microbial communities of an introduced ascidian (Clavelina oblonga) and tracked symbiont changes across locations within the host's native and invasive ranges. Ascidians in the invasive range had less-diverse microbiomes, as well as lower host haplotype diversity, suggesting that specific colonies reach new locations and carry select symbionts from native populations (i.e., founder effects). Further, ascidians in the invasive range hosted a different composition of symbionts, including microbes with the potential to aid in processes related to invasion success (e.g., nutrient cycling). We conclude that the putative functionality and observed flexibility of this introduced ascidian microbiome may represent an underappreciated factor in the successful establishment of nonnative species in new environments.

Efficiency of growth biostimulators in production of planting material of northern white cedar

An assessment of the efficacy of preparations (Kornevin, SP; Albit, TPS; Epin-extra) in the production of planting material of Northern white cedar by vegetative propagation with wood cuttings under the conditions of the Central Black Earth Region of the Russian Federation is given on the example of the Orel region. All the studied preparations had a significant effect on the rooting process of cuttings. The obtained and analyzed data of phenological observations showed that the greatest effect on the acceleration of the onset of the of root formation phase had preparation “Albit, TPS”, 3-4 weeks earlier than the control. The number of formed cuttings and their length were also mainly influenced by “Albit, TPS”, which increased the average number of roots by 3 pcs., and their average length by 44 mm, in comparison with the control. The effect of the use of the biostimulator “Albit, TPS” had a significant influence on the number of established cuttings, providing 20 rooted cuttings or 28% more than in the control.

When more is more: taking advantage of species diversity to move towards sustainable aquaculture

Human population growth has increased demand for food products, which is expected to double in coming decades. Until recently, this demand has been met by expanding agricultural area and intensifying agrochemical-based monoculture of a few species. However, this development pathway has been criticised due to its negative impacts on the environment and other human activities. Therefore, new production practices are needed to meet human food requirements sustainably in the future. Herein, we assert that polyculture practices can ensure the transition of aquaculture towards sustainable development. We review traditional and recent polyculture practices (ponds, recirculated aquaculture systems, integrated multi-trophic aquaculture, aquaponics, integrated agriculture-aquaculture) to highlight how they improve aquaculture through the coexistence and interactions of species. This overview highlights the importance of species compatibility (i.e. species that can live in the same farming environment without detrimental interactions) and complementarity (i.e. complementary use of available resources and/or commensalism/mutualism) to achieve efficient and ethical aquaculture. Overall, polyculture combines aspects of productivity, environmental protection, resource sharing, and animal welfare. However, several challenges must be addressed to facilitate polyculture development across the world. We developed a four-step conceptual framework for designing innovative polyculture systems. This framework highlights the importance of (i) using prospective approaches to consider which species to combine, (ii) performing integrated assessment of rearing environments to determine in which farming system a particular combination of species is the most relevant, (iii) developing new tools and strategies to facilitate polyculture system management, and (iv) implementing polyculture innovation for relevant stakeholders involved in aquaculture transitions.

Ecological Engineering for the Optimisation of the Land-Based Marine Aquaculture of Coastal Shellfish

Whilst the demand for nutritious and sustainable seafood is increasing, fishing yields are declining due to overfishing and climate change. The inshore aquaculture of marine molluscs-e.g., the suspension-feeding cockle Cerastoderma edule for NW Europe-might be an alternative practice if cost-effective and nature-based technology enhances growth and survival. Our inshore experiments revealed that increasing the seawater residence time resulted in improved water quality. The reduction in sediment loads and stimulation of pelagic microalgal growth resulted in enhanced shell growth and meat content of the wild cockles seeded into the system. Shorter residence times resulted also in an increase in benthic microalgae, but the concurrent increase in silt content of the sediment appeared to hamper effective filtration by cockles. The growth conditions (with respect to the water and sediment quality) for the inshore cultivation of cockles can indeed be improved by means of ecological engineering, suggesting that the inshore aquaculture of marine shellfish can provide sustainable food and income for coastal communities, in particular when the shellfish farms are located in low-lying salinized coastal areas where common agriculture practices are no longer profitable. The involvement of the shellfishery industry was and will be crucial for studying and understanding the complex practice of cockle cultivation.

Chemical assessment of marine sediments in vicinity of Norwegian fish farms - A pilot study

While aquaculture is growing rapidly all over the world and generating many economic benefits, so have the environmental concerns about the externalities posed by the fish-farming industry. The distribution profiles of organic compounds and inorganic elements were explored in marine surface sediments collected in proximity of two active Norwegian fish farms, Hestøya and Nørholmen (<200-1100 m from the perimeter edge of the installations). Overall, the sediment organic matter (SOM) content was 7.3 ± 4.9%, with 7.9 ± 5.1% and 4.0 ± 0.5% for Hestøya and Nørholmen, respectively. A non-targeted analysis was performed for screening organic compounds in marine sediments, and the presence of 60 compounds was detected. Among suspect compounds were alkanes, alkenes, aromatics, aldehydes, ketones, esters, alcohols, diols, polycyclic aromatic hydrocarbons (PAHs), terpenes and terpenoids. Heptanal, benzaldehyde, 4-oxoisophorone, 1,7-dimethylnaphthalene and 3-bromophenol were the most abundant compounds in marine sediments. In total, concentrations of 47 elements were measured, concentrations of As, Cd, Cr, Cu, Hg, Mo, Ni, Sn and Zn were strongly influenced by anthropogenic inputs, while concentrations of Ce, Co, Al, Fe and Ti were related to the geology of the local bedrock. The chemical composition of marine sediments was different at Hestøya and Nørholmen, indicating different anthropogenic inputs in these areas. In general, concentrations of toxic elements were below the proposed guidelines for Norwegian marine sediment quality and can be characterised as background pollution. Overall, fish-farming activities had only a minor or negligible influence on marine sediments and are unlikely to cause any harm to local aquatic life in the studied area.

Multi-taxa inventory of naturalized species in Chile

Here we present a multi-taxa inventory of naturalized alien species recorded on continental Chile and adjacent marine habitats, including eight taxonomic groups. We identified 1,122 species. These comprise 790 vascular plants (terrestrial and aquatic); 31 nonvascular plants [Bryophyta (mosses), Marchantiophyta (liverworts) and Anthocerotophyta (hornworts)]; 18 marine and freshwater macro and micro algae; 71 fungi; 39 terrestrial vertebrates (amphibians, reptiles, mammals and birds); 108 insects; 37 marine and freshwater invertebrates and vertebrates (6 polychaetes, 3 mollusks and 28 Pisces); and 28 terrestrial gastropods. For all taxonomic groups, naturalized species were found to mainly be distributed in regions with Mediterranean and temperate climates, with few at either extreme of the country. The invasion curves show that naturalized species first underwent a positive increment, followed by an apparent plateau phase, mainly in vascular plants, insects and vertebrates. In fungi, marine and freshwater macro and microalgae, vertebrates and invertebrates, the cumulative number of naturalized species increased sharply starting in the early 20th century; the lack of collections before 1900 is also evident. When considering naturalized species as a whole, this inventory highlights that the rate of new naturalizations consistently increased after 1950, especially for some taxonomic groups such as insects, fungi, and vascular plants. This multi-taxa inventory of naturalized species provides a platform for national reporting on biodiversity indicators and highlights areas where Chile must invest resources to manage biological invasions.

Determinants of establishment success: Comparing alien and native freshwater fishes in Taiwan

Many parts of Asia, including Taiwan, have suffered severely from freshwater fish invasions. However, few studies using an assemblage approach have been conducted in the region so far that would help to prioritize suitable preventive actions. In this study, we focused on the invasion process from the import stage to the establishment stage, and defined establishment success as the success during this predefined process. We used datasets of freshwater fish assemblages in Taiwan to (1) compare established versus non-established alien species to distinguish the determinants of establishment success, and (2) to use these determinants to test a life history hypothesis which predicts that the magnitudes of the determinants should be significantly different between established alien species and native species. We collated a dataset for freshwater fish species which were imported into Taiwan (n = 118) of which some successfully established (n = 26), and another dataset for freshwater fish species native to Taiwan (n = 77). For each imported species, we collected data for 17 variables, including two phylogenetic, two human-use, two invasion history, and 11 life history variables. We then used decision tree methods, which have advantages in analyzing datasets with many variables of mixed types without the need to make assumptions about data distributions and input data for missing values. Our results showed that aquaculture use and maximum body length were the most important determinants for predicting establishment success of alien freshwater fish in Taiwan. Comparing five important determinants between established alien versus native species showed that the established alien species were significantly more often used in aquaculture, were associated with a higher number of established countries, and had a larger body length and greater highest water temperature tolerance than the native species. We thus conclude that our results provided evidence to support our stated hypothesis. We suggest that aquaculture use, measures of body size, and the number of previously invaded countries may alert researchers and conservation managers to species with a high establishment potential, especially for countries with similar conditions as those in Taiwan.

Patterns of association of native and exotic boring polychaetes on the southeastern Pacific coast of Chile: the combined importance of negative, positive and random interactions

BACKGROUND

Studies of biological invasions focus on negative interactions between exotic and native biotas, emphasizing niche overlap between species and competitive exclusion. However, the effects of positive interactions and coexistence are poorly known. In this study we evaluate the importance of positive, negative, or random species associations in explaining the coexistence of native and exotic boring polychaetes inhabiting invertebrate hosts, on the southeastern Pacific coast of Chile. We assess three hypotheses to explain the observed patterns: positive species interactions, weak competitive interactions, and competitive intransitivity.

METHODOLOGY

To assess the potential effect of competition between native and exotic polychaetes we analyzed patterns of co-occurrence of species pairs in northern and southern regions, using the metric of the probabilistic model. Since biotic interactions can affect not only native species, we also evaluated correlations between native and exotic polychaete abundance, using reduced major axis regression linear models. To assess the transitivity of competitive hierarchies we used metrics and analytical methods based on abundance matrices to estimate species competition and patch transition matrices.

RESULTS

On average 50% of the species pairs presented significant weak negative associations, all associated with the exotic species Polydora rickettsi; the remaining 50% had random associations, and none showed positive associations. However, the relationship of abundance between native and exotic boring polychates supports a tendency towards coexistence. At local and regional scales, we observed the presence of a transitive network competition structure, where the exotic boring polychaete, P. rickettsi was generally the dominant species.

CONCLUSIONS

Our results support that native and exotic boring polychaete species coexist through weak competitive interactions. Nevertheless, the large number of random interactions observed indicates that species coexistence can be accounted for by stochastic processes, as proposed by neutral theory. Coexistence may be a frequent result of interactions between native and exotic species, although less apparent than competitive exclusion. Thus, the probabilistic point-of-view used here provides a statistical tool for evaluating coexistence as a result of exotic and native species' interactions, an idea which has been proposed in invasion ecology, but largely lacks empirical support and methodologies for detecting underlying mechanisms. Finally, we found evidence that P. rickettsi is a successful invader by being competitively dominant, but not excluding other species.

Cleaning up seas using blue growth initiatives: Mussel farming for eutrophication control in the Baltic Sea

Eutrophication is a serious threat to aquatic ecosystems globally with pronounced negative effects in the Baltic and other semi-enclosed estuaries and regional seas, where algal growth associated with excess nutrients causes widespread oxygen free "dead zones" and other threats to sustainability. Decades of policy initiatives to reduce external (land-based and atmospheric) nutrient loads have so far failed to control Baltic Sea eutrophication, which is compounded by significant internal release of legacy phosphorus (P) and biological nitrogen (N) fixation. Farming and harvesting of the native mussel species (Mytilus edulis/trossulus) is a promising internal measure for eutrophication control in the brackish Baltic Sea. Mussels from the more saline outer Baltic had higher N and P content than those from either the inner or central Baltic. Despite their relatively low nutrient content, harvesting farmed mussels from the central Baltic can be a cost-effective complement to land-based measures needed to reach eutrophication status targets and is an important contributor to circularity. Cost effectiveness of nutrient removal is more dependent on farm type than mussel nutrient content, suggesting the need for additional development of farm technology. Furthermore, current regulations are not sufficiently conducive to implementation of internal measures, and may constitute a bottleneck for reaching eutrophication status targets in the Baltic Sea and elsewhere.

Predicting impacts of future climate change and hydropower development towards habitats of native and non-native fishes

Climate change and hydropower development are two primary stressors affecting riverine ecosystems and both stressors facilitate invasions by non-native species. However, little study has focused on how habitats of native and non-native fishes may be affected by independent or combined impacts of such stressors. Here we used the Jinsha River as an example to predict habitat change and distributional shift of native and non-native fishes with species distribution models. The Jinsha River Basin has nearly 40 cascade dams constructed or planned and located in the Tibetan Plateau, which is sensitive to future climate change. Two climate change scenarios and future hydropower development were combined to produce five scenarios of future changes. Under the impacts of independent extreme climate change or hydropower development, non-native fishes showed greater habitat gain in total, while native fishes shifted their distribution into tributaries and higher elevations, and impacts were stronger in combined scenarios. Habitat overlap between the two groups also increased in future scenarios. Certain fish traits correlated with stressors in habitat change prediction. River basins with hydropower development were shown to face higher risk of non-native fishes invasion under future climate change. As the most biodiverse river basins globally are threatened by hydropower development, our results emphasize the importance of regulating non-native fish introduction in reservoirs. Our approaches are also applicable to other systems globally to better understand how hydropower development and climate change may increase invasion risk, and therefore help conserve native species effectively.

Marine seafood production via intense exploitation and cultivation in China: Costs, benefits, and risks

Identifying strategies to maintain seafood supply is central to global food supply. China is the world's largest producer of seafood and has used a variety of production methods in the ocean including domestic capture fisheries, aquaculture (both freshwater and marine), stock enhancement, artificial reef building, and distant water fisheries. Here we survey the outcomes of China's marine seafood production strategies, with particular attention paid to the associated costs, benefits, and risks. Benefits identified include high production, low management costs, and high employment, but significant costs and risks were also identified. For example, a majority of fish in China's catches are one year-old, ecosystem and catch composition has changed relative to the past, wild and farmed stocks can interact both negatively and positively, distant water fisheries are a potential source of conflict, and disease has caused crashes in mariculture farms. Reforming China's wild capture fisheries management toward strategies used by developed nations would continue to shift the burden of production to aquaculture and could have negative social impacts due to differences in fishing fleet size and behavior, ecosystem structure, and markets. Consequently, China may need to develop novel management methods in reform efforts, rather than rely on examples from other large seafood producing countries. Improved accounting of production from fisheries and aquaculture, harmonization and centralization of historical data sets and systematic scientific surveys would improve the knowledge base for planning and evaluating future reform.

Discrimination of Spatial Distribution of Aquatic Organisms in a Coastal Ecosystem Using eDNA

The nonlinearity and complexity of coastal ecosystems often cause difficulties when analyzing spatial and temporal patterns of ecological traits. Environmental DNA (eDNA) monitoring has provided an alternative to overcoming the aforementioned issues associated with classical monitoring. We determined aquatic community taxonomic composition using eDNA based on a meta-barcoding approach that characterizes the general ecological features in the Gwangyang Bay coastal ecosystem. We selected the V9 region of the 18S rDNA gene (18S V9), primarily because of its broad range among eukaryotes. Our results produced more detailed spatial patterns in the study area previously categorized (inner bay, main channel of the bay and outer bay) by Kim et al. (2019). Specifically, the outer bay zone was clearly identified by CCA using genus-level identification of aquatic organisms based on meta-barcoding data. We also found significant relationships between environmental factors. Therefore, eDNA monitoring based on meta-barcoding approach holds great potential as a complemental monitoring tool to identify spatial taxonomic distribution patterns in coastal areas.