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Lex JR, Entezari B, Toor J, Abbas A, Nousiainen M, Rahman C, Whyne C, Ravi B. Intraoperative scrub nurse turnover in orthopaedic surgery procedures: An opportunity for improved operating room efficiency. J Healthc Qual Res 2024; 39:155-162. [PMID: 38580507 DOI: 10.1016/j.jhqr.2024.03.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2023] [Revised: 02/08/2024] [Accepted: 03/15/2024] [Indexed: 04/07/2024]
Abstract
BACKGROUND Scrub nurses play a crucial role in facilitating orthopaedic surgeries, and thus intraoperative scrub nurse turnover may disrupt the workflow of the surgical team and prolong duration of surgery (DOS). The purpose of this study was to quantify the impact of intraoperative scrub nurse turnover on operative time of orthopaedic surgeries lasting less than 3h in duration. METHODS Prospectively collected databases from two institutions were retrospectively queried to identify all orthopaedic procedures of maximum mean duration of 180min from March 4th, 2018 to August 31st, 2022. Cases were divided into two groups, those with scrub nurse turnover and those without. Propensity score matching was conducted to match groups by surgeon, hospital, patient age, gender, and ASA classification. Unpaired t-tests were used to compare mean DOS for each surgical procedure. Average treatment effect on treated (ATET) with 95% confidence intervals (CIs) were calculated. RESULTS Scrub nurse turnover significantly prolonged DOS for both bone forearm facture open reduction and internal fixation (ORIF) (ATET=21.08, p=0.001), ankle ORIF (ATET=21.26, p<0.001), clavicle ORIF (ATET=16.16, p=0.028), femur intramedullary nail (ATET=11.52, p=0.003), rotator cuff repair (ATET=16.88, p<0.001), partial discectomy (ATET=10.52, p=0.001), total knee arthroplasty (TKA) (ATET=5.69, p<0.001), anterior total hip arthroplasty (THA) (ATET=8.80, p<0.001), lateral THA (ATET=7.02, p<0.001), and uncemented hip hemiarthroplasty (ATET=16.79, p=0.049). CONCLUSION Intraoperative scrub nurse turnover significantly prolongs surgical times in orthopaedic surgeries lasting up to 3h in duration. This highlights the importance of developing strategies to prevent intraoperative scrub nurse turnover to improve OR efficiency and decrease healthcare costs.
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Affiliation(s)
- J R Lex
- Orthopaedic Biomechanics Lab, Sunnybrook Research Institute, Toronto, ON, Canada; Division of Orthopaedic Surgery, Temerty Faculty of Medicine, University of Toronto, Toronto, ON, Canada
| | - B Entezari
- Granovsky Gluskin Division of Orthopaedics, Mount Sinai Hospital, Toronto, ON, Canada; Queen's University School of Medicine, Kingston, ON, Canada.
| | - J Toor
- Division of Orthopaedic Surgery, Temerty Faculty of Medicine, University of Toronto, Toronto, ON, Canada
| | - A Abbas
- Temerty Faculty of Medicine, University of Toronto, Toronto, ON, Canada
| | - M Nousiainen
- Division of Orthopaedic Surgery, Temerty Faculty of Medicine, University of Toronto, Toronto, ON, Canada; Division of Orthopaedic Surgery, Sunnybrook Health Sciences Centre, Toronto, ON, Canada
| | - C Rahman
- Division of Orthopaedic Surgery, Sunnybrook Health Sciences Centre, Toronto, ON, Canada
| | - C Whyne
- Orthopaedic Biomechanics Lab, Sunnybrook Research Institute, Toronto, ON, Canada; Division of Orthopaedic Surgery, Temerty Faculty of Medicine, University of Toronto, Toronto, ON, Canada
| | - B Ravi
- Division of Orthopaedic Surgery, Temerty Faculty of Medicine, University of Toronto, Toronto, ON, Canada; Division of Orthopaedic Surgery, Sunnybrook Health Sciences Centre, Toronto, ON, Canada
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Jaffari ZH, Na S, Abbas A, Park KY, Cho KH. Digital imaging-in-flow (FlowCAM) and probabilistic machine learning to assess the sonolytic disinfection of cyanobacteria in sewage wastewater. J Hazard Mater 2024; 468:133762. [PMID: 38402678 DOI: 10.1016/j.jhazmat.2024.133762] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 01/25/2024] [Accepted: 02/08/2024] [Indexed: 02/27/2024]
Abstract
Assessing the cyanobacteria disinfection in sewage and its compliance with international-standards requires determining the concentration and viability, which can be achieve using Imaging Flow Cytometry device called FlowCAM. The objective is to thoroughly investigate the sonolytic morphological changes and disinfection-performance towards toxic cyanobacteria existing in sewage using the FlowCAM. After optimizing the process conditions, over 80% decline in cyanobacterial cell counts was observed, accompanied by an additional 10-15% of cells exhibiting injuries, as confirmed through morphological investigation. Moreover, for the first time, the experimentally collected data was utilized to build deep-learning probabilistic-neural-networks (PNN) and natural-gradient-boosting (NGBoost) models for predicting disinfection efficiency and ABD area as target outputs. The findings suggest that the NGBoost model exhibited superior prediction performance for both targets, with high test coefficient of determination (R2 > 0.87) and lower test errors (RMSE < 7.10, MAE < 4.14). The confidence interval examination in NGBoost prediction performance showed a minute variation from the experimentally calculated values, suggesting a high accuracy in model prediction. Finally, SHAP analysis suggests the sonolytic time alone contributes around 50% to the cyanobacteria disinfection. Overall, the findings demonstrate the effectiveness of the FlowCAM device and the potential of machine-learning modeling in predicting disinfection outcomes.
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Affiliation(s)
- Zeeshan Haider Jaffari
- Department of Civil and Environmental Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Seongyeon Na
- Department of Civil, Urban, Earth and Environmental Engineering, Ulsan National Institute of Science and Tehchnology (UNIST), UNIST-gil 50, Ulsan 44919, Republic of Korea
| | - Ather Abbas
- Physical Science and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal, Mecca, Saudi Arabia
| | - Ki Young Park
- Department of Civil and Environmental Engineering, Konkuk University, Seoul 05029, Republic of Korea.
| | - Kyung Hwa Cho
- School of Civil, Environmental, and Architectural Engineering, Korea University, Seoul 02841, South Korea.
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Kim CM, Jaffari ZH, Abbas A, Chowdhury MF, Cho KH. Machine learning analysis to interpret the effect of the photocatalytic reaction rate constant (k) of semiconductor-based photocatalysts on dye removal. J Hazard Mater 2024; 465:132995. [PMID: 38039815 DOI: 10.1016/j.jhazmat.2023.132995] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Revised: 11/02/2023] [Accepted: 11/10/2023] [Indexed: 12/03/2023]
Abstract
Photocatalytic reactions with semiconductor-based photocatalysts have been investigated extensively for application to wastewater treatment, especially dye degradation, yet the interactions between different process parameters have rarely been reported due to their complicated reaction mechanisms. Hence, this study aims to discern the impact of each factor, and each interaction between multiple factors on reaction rate constant (k) using a decision tree model. The dyes selected as target pollutants were indigo and malachite green, and 5 different semiconductor-based photocatalysts with 17 different compositions were tested, which generated 34 input features and 1527 data points. The Boruta Shapley Additive exPlanations (SHAP) feature selection for the 34 inputs found that 11 inputs were significantly important. The decision tree model exhibited for 11 input features with an R2 value of 0.94. The SHAP feature importance analysis suggested that photocatalytic experimental conditions, with an importance of 59%, was the most important input category, followed by atomic composition (39%) and physicochemical properties (2%). Additionally, the effects on k of the synergy between the metal cocatalysts and important experimental conditions were confirmed by two feature SHAP dependence plots, regardless of importance order. This work provides insight into the single and multiple factors that affect reaction rate and mechanism.
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Affiliation(s)
- Chang-Min Kim
- Future and Fusion Lab of Architectural, Civil and Environmental Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Zeeshan Haider Jaffari
- Department of Civil and Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea
| | - Ather Abbas
- Physical Science and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal, Mecca Province, Saudi Arabia
| | - Mir Ferdous Chowdhury
- Department of Global Smart City, Sungkyunkwan University (SKKU), 2066, Seobu-ro, Jangan-gu, Suwon, Gyeonggi-do 16419, Republic of Korea
| | - Kyung Hwa Cho
- School of Civil, Environmental, and Architectural Engineering, Korea University, Seoul 02841, Republic of Korea.
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Jaffari ZH, Abbas A, Kim CM, Shin J, Kwak J, Son C, Lee YG, Kim S, Chon K, Cho KH. Transformer-based deep learning models for adsorption capacity prediction of heavy metal ions toward biochar-based adsorbents. J Hazard Mater 2024; 462:132773. [PMID: 37866140 DOI: 10.1016/j.jhazmat.2023.132773] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 08/24/2023] [Accepted: 10/10/2023] [Indexed: 10/24/2023]
Abstract
Biochar adsorbents synthesized from food and agricultural wastes are commonly applied to eliminate heavy metal (HM) ions from wastewater. However, biochar's diverse characteristics and varied experimental conditions make the accurate estimation of their adsorption capacity (qe) challenging. Herein, various machine-learning (ML) and three deep learning (DL) models were built using 1518 data points to predict the qe of HM on various biochars. The recursive feature elimination technique with 28 inputs suggested that 14 inputs were significant for model building. FT-transformer with the highest test R2 (0.98) and lowest root mean square error (RMSE) (0.296) and mean absolute error (MAE) (0.145) outperformed various ML and DL models. The SHAP feature importance analysis of the FT-transformer model predicted that the adsorption conditions (72.12%) were more important than the pyrolysis conditions (25.73%), elemental composition (1.39%), and biochar's physical properties (0.73%). The two-feature SHAP analysis proposed the optimized process conditions including adsorbent loading of 0.25 g, initial concentration of 12 mg/L, and solution pH of 9 using phosphoric-acid pre-treated biochar synthesized from banana-peel with a higher O/C ratio. The t-SNE technique was applied to transform the 14-input matrix of the FT-Transformer into two-dimensional data. Finally, we outlined the study's environmental implications.
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Affiliation(s)
- Zeeshan Haider Jaffari
- Department of Civil and Environmental Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Ather Abbas
- School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology (UNIST), UNIST-gil 50, Ulsan 44919, Republic of Korea
| | - Chang-Min Kim
- School of Civil, Environmental, and Architectural Engineering, Korea University, Seoul 02841, South Korea
| | - Jaegwan Shin
- Department of Integrated Energy and Infra system, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea
| | - Jinwoo Kwak
- Department of Integrated Energy and Infra system, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea
| | - Changgil Son
- Department of Integrated Energy and Infra system, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea
| | - Yong-Gu Lee
- Department of Environmental Engineering, College of Engineering, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea
| | - Sangwon Kim
- Department of Integrated Energy and Infra system, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea
| | - Kangmin Chon
- Department of Integrated Energy and Infra system, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea; Department of Environmental Engineering, College of Engineering, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea.
| | - Kyung Hwa Cho
- School of Civil, Environmental, and Architectural Engineering, Korea University, Seoul 02841, South Korea.
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Abbas A, Okpapi JU, Njoku CH, Abba AA. Impact of Seasonal Changes on Asthma Control in North-Western Nigeria. West Afr J Med 2023; 40:1304-1310. [PMID: 38261305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
BACKGROUND Asthma control is poor worldwide and is often affected by changes in environmental conditions. Effort to determine the cause of this heavy burden on patients and the healthcare system is crucial. AIM To determine the role of seasonal changes on asthma control in Sokoto, North-Western Nigeria. METHODS One hundred and one (101) patients with physician diagnosed asthma were consecutively recruited after obtaining informed consent. A structured researcher administered questionnaire was used as instrument of data collection and asthma control test questionnaire was also used to assess level of asthma control in each participant. Five items with a 4-week recall were assessed. Data for temperature, humidity, wind and rain was obtained from the Nigerian Meteorological Agency (NIMET), Sokoto. We computed frequency and level of asthma control with seasons of the year and weather variables. RESULTS One hundred and one patients comprising 71 females and 30 males with a mean age of 32.14 ± 10.68 years participated in the study. Level of asthma control was found to be poor among the participants with 41(40.6%) having very poorly controlled asthma, 30(29.7%) with not well controlled and 30(24.8%) well controlled asthma respectively. Among patients with very poorly controlled asthma, 22(48.9%) occurred during harmattan season and 14(31.1%) during rainy season. Weather parameters such as humidity shows significant relationship with asthma control (B= -0.504, P= 0.031, 95% CI [-0.012, -0.0253]). CONCLUSION The study shows that asthma control is poor among the participants and presentation with poor asthma control is more during harmattan season.
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Affiliation(s)
- A Abbas
- Department of Medicine, Usmanu Danfodiyo University Teaching Hospital, Sokoto, Nigeria.
| | - J U Okpapi
- Department of Medicine, Ahmadu Bello University Teaching Hospital, Zaria, Nigeria
| | - C H Njoku
- Department of Medicine, University of Calabar Teaching Hospital, Calabar Nigeria
| | - A A Abba
- Department of Medicine, Ahmadu Bello University Teaching Hospital, Zaria, Nigeria
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Pyo J, Pachepsky Y, Kim S, Abbas A, Kim M, Kwon YS, Ligaray M, Cho KH. Long short-term memory models of water quality in inland water environments. Water Res X 2023; 21:100207. [PMID: 38098887 PMCID: PMC10719578 DOI: 10.1016/j.wroa.2023.100207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Revised: 11/08/2023] [Accepted: 11/14/2023] [Indexed: 12/17/2023]
Abstract
Water quality is substantially influenced by a multitude of dynamic and interrelated variables, including climate conditions, landuse and seasonal changes. Deep learning models have demonstrated predictive power of water quality due to the superior ability to automatically learn complex patterns and relationships from variables. Long short-term memory (LSTM), one of deep learning models for water quality prediction, is a type of recurrent neural network that can account for longer-term traits of time-dependent data. It is the most widely applied network used to predict the time series of water quality variables. First, we reviewed applications of a standalone LSTM and discussed its calculation time, prediction accuracy, and good robustness with process-driven numerical models and the other machine learning. This review was expanded into the LSTM model with data pre-processing techniques, including the Complete Ensemble Empirical Mode Decomposition with Adaptive Noise method and Synchrosqueezed Wavelet Transform. The review then focused on the coupling of LSTM with a convolutional neural network, attention network, and transfer learning. The coupled networks demonstrated their performance over the standalone LSTM model. We also emphasized the influence of the static variables in the model and used the transformation method on the dataset. Outlook and further challenges were addressed. The outlook for research and application of LSTM in hydrology concludes the review.
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Affiliation(s)
- JongCheol Pyo
- Department for Environmental Engineering, Pusan National University, Busan 46241, Republic of Korea
| | - Yakov Pachepsky
- Environmental Microbial and Food Safety Laboratory, USDA-ARS, Beltsville, MD, USA
| | - Soobin Kim
- School of Civil, Urban, Earth, and Environmental Engineering, Ulsan National Institute of Science and Technology, 50 UNIST-gil, Ulju-gun, Ulsan 44919, Republic of Korea
- Disposal Safety Evaluation R&D Division, Korea Atomic Energy Research Institute (KAERI), 111, Daedeok-daero 989 beon-gil, Yuseong-gu, Daejeon 34057, Republic of Korea
| | - Ather Abbas
- Physical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Minjeong Kim
- Disposal Safety Evaluation R&D Division, Korea Atomic Energy Research Institute (KAERI), 111, Daedeok-daero 989 beon-gil, Yuseong-gu, Daejeon 34057, Republic of Korea
| | - Yong Sung Kwon
- Environmental Impact Assessment Team, Division of Ecological Assessment Research, National Institute of Ecology, Seocheon, Republic of Korea
| | - Mayzonee Ligaray
- Institute of Environmental Science and Meteorology, College of Science, University of the Philippines Diliman, Quezon City 1101, Philippines
| | - Kyung Hwa Cho
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul 02841, Republic of Korea
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El-Magd ESA, Elgeidie A, Elmahdy Y, El Sorogy M, Elyamany MA, Abulazm IL, Abbas A. Impact of laparoscopic repair on type III/IV giant paraesophageal hernias: a single-center experience. Hernia 2023; 27:1555-1570. [PMID: 37642773 DOI: 10.1007/s10029-023-02851-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Accepted: 07/14/2023] [Indexed: 08/31/2023]
Abstract
PURPOSE Giant paraesophageal hernia (GPEH) is a challenging problem for surgeons because of its high recurrence rate. This study was conducted to compare the outcomes in type IV vs. type III GPEHs after laparoscopic repair. Other outcomes included peri-operative morbidity and long-term quality of life. METHODS A retrospective analysis of 130 GPEH patients in a period between 2010 and 2019 underwent a tailored laparoscopic repair in our tertiary center with a minimum follow-up of 48 months. Operative steps included hernial sac excision, crural repair, relaxing incisions, and mesh cruroplasty with special indications. RESULTS The study enrolled 90 patients with type III and 40 patients with type IV GPEH. Type IV GPEH patients were older, more fragile, and scored worse on ASA classification, aside from having a more challenging surgical technique (wider crura, weaker muscles, increased need for release incisions, and mesh cruroplasty).Type IV GPEHs had a prolonged operative durations, and a higher conversion rate. Additionally, the same group showed increased morbidity, mortality, and re-operation rates. With a mean follow-up of 65 months (range 48-150 months), the incidence of recurrence was 20.7%, with an increased incidence in type IV GPEH (37.5% vs. 13.33% in type III GPEH). Type IV GPEH, low pre-operative albumin, larger crural defect, and low surgeon experience were significant risk factors for recurrence after laparoscopic repair of GPEH. CONCLUSION Type IV GPEH has a higher peri-operative morbidity and recurrence rate; so, a more tailored laparoscopic repair with a high surgeon experience is needed.
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Affiliation(s)
- E-S A El-Magd
- Faculty of Medicine, Mansoura University, Mansoura, Egypt.
- Department of General Surgery, Faculty of Medicine, Gastrointestinal Surgical Center GISC, Mansoura University, Gehan Street, Mansoura, 35511, Al Dakahlia Governorate, Egypt.
| | - A Elgeidie
- Faculty of Medicine, Mansoura University, Mansoura, Egypt
| | - Y Elmahdy
- Faculty of Medicine, Mansoura University, Mansoura, Egypt
| | - M El Sorogy
- Faculty of Medicine, Mansoura University, Mansoura, Egypt
| | - M A Elyamany
- Faculty of Medicine, Mansoura University, Mansoura, Egypt
| | - I L Abulazm
- Faculty of Medicine, Mansoura University, Mansoura, Egypt
| | - A Abbas
- Faculty of Medicine, Mansoura University, Mansoura, Egypt
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Abbas A, Jarjees H. EVALUATION THE EFFECT OF THE ADDITION OF ZIRCONIUM OXIDE AND TITANIUM DIOXIDE NANOPARTICLES ON SHEAR BOND STRENGTHS OF ORTHODONTIC ADHESIVE: IN-VITRO STUDY. Georgian Med News 2023:113-121. [PMID: 37805884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 10/09/2023]
Abstract
OBJECTIVES the study aims to assess the shear bond strength of modified- 3M orthodontic adhesive Transbond™ XT with different concentrations of Titanium Dioxide and zirconium oxide nanoparticles. In a retrospective cross-sectional study a hundred sound-extracted human upper premolars were collected. 3M orthodontic adhesive Transbond™ XT was modified by (0,02%, 0.04%, and 0.06% Zirconium Oxide), and (0,02%, 0.04%, and 0.06% Titanium Dioxide) nanoparticles, and (0,02%, 0.04%, and 0.06% Zirconium Oxide and Titanium Dioxide). dentaurum discovery pearl ceramic bracket were bonded to buccal enamel surfaces of the samples of control and nine modified adhesive groups. At 24 h after bonding, shear bond strength was measured. Adhesive remnant index was scored under (10X) magnification power of stereomicroscope after de-bonding. The chemical characteristics of orthodontic adhesive material were explored before and after mixing with Titanium Dioxide and zirconium oxide nanoparticles by using FTIR. (Zirconium Oxide nanoparticles) group and combination (Zirconium Oxide and Titanium Dioxide nanoparticles) had a higher shear bond strength mean value than the control group, 0.06% combination (Zirconium Oxide and Titanium Dioxide nanoparticles) group had the highest mean value. About adhesive remnant index, no significant differences were found among the studying groups. The addition of 0.06% combination (Zirconium Oxide and Titanium Dioxide nanoparticles) had the best performance and improved shear bond strength of 3M orthodontic adhesive Transbond™ XT.
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Affiliation(s)
- A Abbas
- Department of Pedodontic orthodontics and Preventive Dentistry, College of Dentistry, University of Mosul, Mosul, Iraq
| | - H Jarjees
- Department of Pedodontic orthodontics and Preventive Dentistry, College of Dentistry, University of Mosul, Mosul, Iraq
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Liman HM, Tambuwal SH, Abbas A, Awosan KJ, Udegbunam CE. Clinical Profile and Determinants of Loss to Follow-Up in Patients Enrolled in an Urban Antiretroviral Treatment Programme in Northwestern Nigeria. West Afr J Med 2023; 40:634-639. [PMID: 37390349] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/02/2023]
Abstract
INTRODUCTION Loss of follow up in patients enrolled on antiretroviral treatment programmes has the potential to reduce their quality of life. We set out to describe the profile and risk factors for loss to follow up in patients enrolled on our programme. MATERIALS AND METHODS In this retrospective study, we reviewed the records of patients who were identified as lost to follow up between August 2008 to July 2018. Determinants of loss to follow-up were identified by the use of binary logistic regression with SPSS to compare the data of patients lost to follow-up with randomly selected patients who were still in care. RESULTS A total of 4,250 patients were enrolled on our programme during the study period. Of these, 965 patients were identified as lost to follow-up, giving a loss to follow up rate of 22.7%. Compared to patients still in care, patients who were lost to follow up were significantly male (male, n =395, 56% versus female, n= 310, 44%, p<0.0001), of younger age (33.53+9.05 versus 34.48+9.25 years, p = 0.028), married (married, n = 669, 58.9% versus not married n = 467, 41.1%, p<0.0001) and with evidence of low crude weight at the time of recruitment (58.58+12.12 versus 60.09+14.58 kg, p = 0.018). CONCLUSION Our study showed that patients who are young, male, married, recently enrolled, with evidence of the low crude weight, with WHO Clinical Stages III and IV and anaemia at enrolment are commonly lost to follow-up. Clinicians need to target this population to reduce the loss of follow up in patients on antiretroviral therapy.
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Affiliation(s)
- H M Liman
- Department of Medicine, College of Health Sciences, Usmanu Danfodiyo University, Sokoto State, Nigeria. Mobile: 08035959280
| | - S H Tambuwal
- Department of Medicine, Usmanu Danfodiyo University Teaching Hospital, Sokoto State, Nigeria
| | - A Abbas
- Department of Medicine, College of Health Sciences, Usmanu Danfodiyo University, Sokoto State, Nigeria. Mobile: 08035959280
| | - K J Awosan
- Department of Community Health, College of Health Sciences, Usmanu Danfodiyo University, Sokoto State, Nigeria
| | - C E Udegbunam
- Department of Family Medicine, Usmanu Danfodiyo University Teaching Hospital, Sokoto State, Nigeria
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Abbas A, Muhammad SA, Ashar A, Mehfooz SA, Rauf A, Bakhsh M, Nadeem T, Fu H. Comparison of the effect of zinc oxide nanoparticles and extract of Acorus calamus applied topically on surgical wounds inflicted on the skin of rabbits. Pol J Vet Sci 2023; 26:285-293. [PMID: 37389426 DOI: 10.24425/pjvs.2023.145035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/01/2023]
Abstract
Antibiotics are used for postsurgical wound healing purposes but unfortunately, resistance against them demands some alternatives for quick recovery. Sepsis of wounds is a challenge for medical as well as veterinary professionals. Nanoparticles have significant advantages in wound treatment and drug resistance reversal. This study was conducted to appreciate emerging alternates of antibiotics like zinc oxide nanoparticles and plant extracts in topical application. Zinc oxide is considered a good wound healer and its nanoparticles are easy to access. So, the efficacies of zinc oxide nanoparticles and sweet flag plant extract ointments were tested to compare modern and traditional therapeutics as sweet flag is considered a pure medicinal plant. Rabbits were selected for this study due to the healing properties of their skin. Wounds were inflicted on the thoracolumbar region and treated for 29 days post-surgically daily with normal saline and the ointment of zinc oxide nanoparticles and sweet flag extract ointment, prepared in a hydrophilic solvent. Wound shrinkage was observed daily and histopathological analysis was made and results were compared. Zinc oxide nanoparticles ointment showed the most satisfactory results for every parameter included in the study. No side effects of its topical application were observed. Healing was normal without any complications. The preparations of zinc oxide nanoparticles may help in the era of antibiotic resistance as topical drugs in the future.
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Affiliation(s)
- A Abbas
- Department of Pharmacy, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, Sichuan, China
- Department of Clinical Medicine and Surgery, University of Agriculture, Faisalabad 38000, Pakistan
| | - S A Muhammad
- University of Veterinary and Animal Sciences, Lahore, CVAS Jhang 35200, Pakistan
| | - A Ashar
- Wilson College of Textiles, North Carolina State University, North Carolina, USA
| | - S A Mehfooz
- Department of Clinical Medicine and Surgery, University of Agriculture, Faisalabad 38000, Pakistan
| | - A Rauf
- University of Veterinary and Animal Sciences, Lahore, CVAS Jhang 35200, Pakistan
| | - M Bakhsh
- University of Veterinary and Animal Sciences, Lahore, CVAS Jhang 35200, Pakistan
| | - T Nadeem
- University of Veterinary and Animal Sciences, Lahore, Para Veterinary Institute (PVI), Karor 31100, Layyah, Pakistan
| | - H Fu
- Department of Pharmacy, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, Sichuan, China
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Ramakrishnan S, Abbas A, Jordan N. Removal of breast implants as primary treatment for autoimmune/inflammatory syndrome induced by adjuvants. Scand J Rheumatol 2023; 52:219-220. [PMID: 36178439 DOI: 10.1080/03009742.2022.2114187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Affiliation(s)
- S Ramakrishnan
- Department of Medicine, Wirral University Teaching Hospital NHS Foundation Trust, Upton, UK
| | - A Abbas
- Department of Rheumatology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK
| | - N Jordan
- Department of Rheumatology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK
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Son M, Yoon N, Park S, Abbas A, Cho KH. An open-source deep learning model for predicting effluent concentration in capacitive deionization. Sci Total Environ 2023; 856:159158. [PMID: 36191701 DOI: 10.1016/j.scitotenv.2022.159158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 09/27/2022] [Accepted: 09/28/2022] [Indexed: 06/16/2023]
Abstract
To effectively evaluate the performance of capacitive deionization (CDI), an electrochemical ion separation technology, it is necessary to accurately estimate the number of ions removed (effluent concentration) according to energy consumption. Herein, we propose and evaluate a deep learning model for predicting the effluent concentration of a CDI process. The developed deep learning model exhibited excellent prediction accuracy for both constant current and constant voltage modes (R2 ≥ 0.968), and the accuracy increased with the data size. This model was based on the open-source language, Python, and the code has since been distributed with proper instructions for general use. Owing to the nature of the data-oriented deep learning model, the findings of this study are not only applicable to conventional CDI but also to various types of CDI (membrane CDI, flow CDI, faradaic CDI, etc.). Therefore, by referring to the examples shown in this study, we hope that this open-source deep learning code will be widely used in CDI research.
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Affiliation(s)
- Moon Son
- Center for Water Cycle Research, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; Division of Energy and Environment Technology, KIST-School, University of Science and Technology, Seoul 02792, Republic of Korea
| | - Nakyung Yoon
- Center for Water Cycle Research, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, UNIST-gil 50, Ulsan 44919, Republic of Korea
| | - Sanghun Park
- Center for Water Cycle Research, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, UNIST-gil 50, Ulsan 44919, Republic of Korea
| | - Ather Abbas
- School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, UNIST-gil 50, Ulsan 44919, Republic of Korea
| | - Kyung Hwa Cho
- School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, UNIST-gil 50, Ulsan 44919, Republic of Korea.
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Jaffari ZH, Abbas A, Lam SM, Park S, Chon K, Kim ES, Cho KH. Machine learning approaches to predict the photocatalytic performance of bismuth ferrite-based materials in the removal of malachite green. J Hazard Mater 2023; 442:130031. [PMID: 36179629 DOI: 10.1016/j.jhazmat.2022.130031] [Citation(s) in RCA: 20] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 09/05/2022] [Accepted: 09/17/2022] [Indexed: 06/16/2023]
Abstract
This study focuses on the potential capability of numerous machine learning models, namely CatBoost, GradientBoosting, HistGradientBoosting, ExtraTrees, XGBoost, DecisionTree, Bagging, light gradient boosting machine (LGBM), GaussianProcess, artificial neural network (ANN), and light long short-term memory (LightLSTM). These models were investigated to predict the photocatalytic degradation of malachite green from wastewater using various NM-BiFeO3 composites. A comprehensive databank of 1200 data points was generated under various experimental conditions. The ten input variables selected were the catalyst type, reaction time, light intensity, initial concentration, catalyst loading, solution pH, humic acid concentration, anions, surface area, and pore volume of various photocatalysts. The MG dye degradation efficiency was selected as the output variable. An evaluation of the performance metrics suggested that the CatBoost model, with the highest test coefficient of determination (0.99) and lowest mean absolute error (0.64) and root-mean-square error (1.34), outperformed all other models. The CatBoost model showed that the photocatalytic reaction conditions were more important than the material properties. The modeling results suggested that the optimized process conditions were a light intensity of 105 W, catalyst loading of 1.5 g/L, initial MG dye concentration of 5 mg/L and solution pH of 7. Finally, the implications and drawbacks of the current study were stated in detail.
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Affiliation(s)
- Zeeshan Haider Jaffari
- School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology (UNIST), UNIST-gil 50, Ulsan 44919, Republic of Korea
| | - Ather Abbas
- School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology (UNIST), UNIST-gil 50, Ulsan 44919, Republic of Korea
| | - Sze-Mun Lam
- Department of Environmental Engineering, Faculty of Engineering and Green Technology, Universiti Tunku Abdul Rahman, 31900 Kampar, Perak, Malaysia
| | - Sanghun Park
- Center for Water Cycle Research, Korea Institute of Science and Technology, 5 Hwarang-ro 14-gil, Seongbuk-gu, Seoul 02792, Republic of Korea
| | - Kangmin Chon
- Department of Environmental Engineering, College of Engineering, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea; Department of Integrated Energy and Infra system, Kangwon National University, Kangwondaehak-gil, 1, Chuncheon-si, Gangwon-do 24341, Republic of Korea
| | - Eun-Sik Kim
- Department of Environmental System Engineering, Chonnam National University, Yeosu 59626, Republic of Korea.
| | - Kyung Hwa Cho
- School of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology (UNIST), UNIST-gil 50, Ulsan 44919, Republic of Korea; Graduate School of Carbon Neutrality, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea.
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14
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Patel A, Abbas A, Bhattacharyya R, Galaktionova D. Appendiceal diverticulum masquerading as acute appendicitis. J Surg Case Rep 2022; 2022:rjac248. [PMID: 35665397 PMCID: PMC9156021 DOI: 10.1093/jscr/rjac248] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2022] [Accepted: 05/07/2022] [Indexed: 11/14/2022] Open
Abstract
Appendiceal diverticula present as rare clinical finding and are most confused with acute appendicitis. A 65-year-old female was presented to our surgical service after 1 day of right lower quadrant abdominal pain and a computed tomography evaluation, read as a diagnosis of acute appendicitis. Due to the location and quality of pain and intraoperative findings acute appendicitis was our preliminary diagnosis. Follow up with histopathology confirmed acute inflammation of an appendiceal diverticulum. With discordance in original diagnosis from final pathological evaluation, we suggest appendiceal diverticula as an important differential to consider in patients of similar clinical presentation. Surgical treatment with appendectomy and final histological diagnosis are essential in the proper treatment of this rare clinical finding.
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Affiliation(s)
- A Patel
- School of Medicine, Rowan University School of Osteopathic Medicine, Stratford, NJ, USA
| | - A Abbas
- School of Medicine, Rowan University School of Osteopathic Medicine, Stratford, NJ, USA
| | - R Bhattacharyya
- St. Joseph's University Medical Center, Department of Surgery, Paterson, NJ, USA
| | - D Galaktionova
- St. Joseph's University Medical Center, Department of Surgery, Paterson, NJ, USA
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15
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Wall SL, Velin L, Abbas A, Allorto NL, Graner M, Moeller E, Ryan-Coker MFD, Pompermaier L. Who tells the story of burns in low-and-middle income countries? – A bibliometric study. Burns 2022; 49:854-860. [PMID: 35787966 DOI: 10.1016/j.burns.2022.06.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Revised: 05/12/2022] [Accepted: 06/01/2022] [Indexed: 11/15/2022]
Abstract
INTRODUCTION Low- and middle-income countries (LMICs) remain drastically underrepresented in health research, with African countries producing less than 1% of the global output. This work investigates authorship patterns of publications on burns in LMICs. Original research studies addressing burn injuries in LMICs and published between 1st January 2015 and 31st December 2020 were included in the review. Descriptive statistics were performed for country affiliations of authors, World Bank Country Income Groups, WHO group, study-focus and country studied. Of the 458 results, 426 studies met the inclusion criteria. Nearly a quarter of papers on burns in LMICs had both first and senior authors from high-income countries (HICs, n = 95, 24.4%), more than half of the papers had both first and senior authors from upper middle- income countries (upper MICs, n = 222, 57.2%), while less than 1% (n = 3) had first and senior authors exclusively from lower-income countries (LICs). Eleven percent (n = 41/388) of all papers were written without either first nor senior author being from the country studied, and 17 of them (41%) had both first and senior authors from the USA. Twenty-five (6%) of the papers had the first author and not the senior author from the country of focus, while six (2%) had the senior and not the first author from the country of interest. To overcome global health challenges such as burns, locally led research is imperative. The maximum benefit of HIC-LMIC collaborations is achieved when LMICs play an active role in leading the research. When LMICs direct the research being conducted in their country, the harm of inherently inequitable relationships is minimized.
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Affiliation(s)
- S L Wall
- School of Clinical Medicine, Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Pietermaritzburg, South Africa; Pietermaritzburg Burn Service, Pietermaritzburg Metropolitan Department of Surgery, South Africa, Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Pietermaritzburg, South Africa; Developing Research, Innovation, Localization and Leadership (DRILL), College of Health Sciences, University of KwaZulu-Natal, Durban, South Africa.
| | - L Velin
- Centre for Teaching & Research in Disaster Medicine and Traumatology (KMC), Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden
| | - A Abbas
- The Aga Khan University, Pakistan
| | - N L Allorto
- School of Clinical Medicine, Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Pietermaritzburg, South Africa; Pietermaritzburg Burn Service, Pietermaritzburg Metropolitan Department of Surgery, South Africa, Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - M Graner
- School of Medicine, University of Sāo Paulo, Sāo Paulo, Brazil
| | - E Moeller
- Department of Surgery, Oregon Health and Science University, United States
| | - M F D Ryan-Coker
- Department of Surgery, Faculty of Health Sciences, University of Nairobi, Kenya
| | - L Pompermaier
- Department of Hand Surgery, Plastic Surgery and Burns in Linköping University, Sweden; Department of Biomedical and Clinical Sciences Linköping University, Linköping, Sweden
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Ajjan RA, Hensor EMA, Del Galdo F, Shams K, Abbas A, Fairclough RJ, Webber L, Pegg L, Freeman A, Taylor AE, Arlt W, Morgan AW, Tahrani AA, Stewart PM, Russell DA, Tiganescu A. Oral 11β-HSD1 inhibitor AZD4017 improves wound healing and skin integrity in adults with type 2 diabetes mellitus: a pilot randomized controlled trial. Eur J Endocrinol 2022; 186:441-455. [PMID: 35113805 PMCID: PMC8942338 DOI: 10.1530/eje-21-1197] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 02/03/2022] [Indexed: 11/08/2022]
Abstract
BACKGROUND Chronic wounds (e.g. diabetic foot ulcers) reduce the quality of life, yet treatments remain limited. Glucocorticoids (activated by the enzyme 11β-hydroxysteroid dehydrogenase type 1, 11β-HSD1) impair wound healing. OBJECTIVES Efficacy, safety, and feasibility of 11β-HSD1 inhibition for skin function and wound healing. DESIGN Investigator-initiated, double-blind, randomized, placebo-controlled, parallel-group phase 2b pilot trial. METHODS Single-center secondary care setting. Adults with type 2 diabetes mellitus without foot ulcers were administered 400 mg oral 11β-HSD1 inhibitor AZD4017 (n = 14) or placebo (n = 14) bi-daily for 35 days. Participants underwent 3-mm full-thickness punch skin biopsies at baseline and on day 28; wound healing was monitored after 2 and 7 days. Computer-generated 1:1 randomization was pharmacy-administered. Analysis was descriptive and focused on CI estimation. Of the 36 participants screened, 28 were randomized. RESULTS Exploratory proof-of-concept efficacy analysis suggested AZD4017 did not inhibit 24-h ex vivoskin 11β-HSD1 activity (primary outcome; difference in percentage conversion per 24 h 1.1% (90% CI: -3.4 to 5.5) but reduced systemic 11β-HSD1 activity by 87% (69-104%). Wound diameter was 34% (7-63%) smaller with AZD4017 at day 2, and 48% (12-85%) smaller after repeat wounding at day 30. AZD4017 improved epidermal integrity but modestly impaired barrier function. Minimal adverse events were comparable to placebo. Recruitment rate, retention, and data completeness were 2.9/month, 27/28, and 95.3%, respectively. CONCLUSION A phase 2 trial is feasible, and preliminary proof-of-concept data suggests AZD4017 warrants further investigation in conditions of delayed healing, for example in diabetic foot ulcers. SIGNIFICANCE STATEMENT Stress hormone activation by the enzyme 11β-HSD type 1 impairs skin function (e.g. integrity) and delays wound healing in animal models of diabetes, but effects in human skin were previously unknown. Skin function was evaluated in response to treatment with a 11β-HSD type 1 inhibitor (AZD4017), or placebo, in people with type 2 diabetes. Importantly, AZD4017 was safe and well tolerated. This first-in-human randomized, controlled, clinical trial found novel evidence that 11β-HSD type 1 regulates skin function in humans, including improved wound healing, epidermal integrity, and increased water loss. Results warrant further studies in conditions of impaired wound healing, for example, diabetic foot ulcers to evaluate 11β-HSD type 1 as a novel therapeutic target forchronic wounds.
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Affiliation(s)
- R A Ajjan
- Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK
| | - E M A Hensor
- Leeds Institute of Rheumatic and Musculoskeletal Medicine, University of Leeds, Leeds, UK
- NIHR Leeds Biomedical Research Center, Leeds Teaching Hospitals, NHS Trust, Leeds, UK
| | - F Del Galdo
- Leeds Institute of Rheumatic and Musculoskeletal Medicine, University of Leeds, Leeds, UK
- NIHR Leeds Biomedical Research Center, Leeds Teaching Hospitals, NHS Trust, Leeds, UK
| | - K Shams
- Leeds Institute of Rheumatic and Musculoskeletal Medicine, University of Leeds, Leeds, UK
- NIHR Leeds Biomedical Research Center, Leeds Teaching Hospitals, NHS Trust, Leeds, UK
| | - A Abbas
- Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK
| | - R J Fairclough
- Emerging Innovations Unit, Discovery Sciences, BioPharmaceuticals R&D
| | - L Webber
- Emerging Portfolio Development, Late Oncology, Oncology R&D, AstraZeneca, Cambridge, UK
| | - L Pegg
- Emerging Portfolio Development, Late Oncology, Oncology R&D, AstraZeneca, Cambridge, UK
| | - A Freeman
- Emerging Innovations Unit, Discovery Sciences, BioPharmaceuticals R&D
| | - A E Taylor
- Institute of Metabolism and Systems Research, University of Birmingham, Birmingham, UK
- Centre for Endocrinology, Diabetes and Metabolism, Birmingham Health Partners, Birmingham, UK
| | - W Arlt
- Institute of Metabolism and Systems Research, University of Birmingham, Birmingham, UK
- Centre for Endocrinology, Diabetes and Metabolism, Birmingham Health Partners, Birmingham, UK
- NIHR Birmingham Biomedical Research Centre, University Hospitals Birmingham NHS Foundation Trust, Birmingham, UK
| | - A W Morgan
- Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK
- NIHR Leeds Biomedical Research Center, Leeds Teaching Hospitals, NHS Trust, Leeds, UK
| | - A A Tahrani
- Institute of Metabolism and Systems Research, University of Birmingham, Birmingham, UK
- Centre for Endocrinology, Diabetes and Metabolism, Birmingham Health Partners, Birmingham, UK
- NIHR Birmingham Biomedical Research Centre, University Hospitals Birmingham NHS Foundation Trust, Birmingham, UK
| | - P M Stewart
- NIHR Leeds Biomedical Research Center, Leeds Teaching Hospitals, NHS Trust, Leeds, UK
- Faculty of Medicine and Health, University of Leeds, Leeds, UK
| | - D A Russell
- Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK
- Leeds Vascular Institute, Leeds Teaching Hospitals NHS Trust, Leeds, UK
| | - A Tiganescu
- Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, UK
- NIHR Leeds Biomedical Research Center, Leeds Teaching Hospitals, NHS Trust, Leeds, UK
- Correspondence should be addressed to A Tiganescu;
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Redding LE, Tu V, Abbas A, Alvarez M, Zackular JP, Gu C, Bushman FD, Kelly DJ, Barnhart D, Lee JJ, Bittinger KL. Genetic and phenotypic characteristics of Clostridium (Clostridioides) difficile from canine, bovine, and pediatric populations. Anaerobe 2022; 74:102539. [PMID: 35217150 PMCID: PMC9359814 DOI: 10.1016/j.anaerobe.2022.102539] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 02/02/2022] [Accepted: 02/17/2022] [Indexed: 12/15/2022]
Abstract
Objectives: Carriage of Clostridioides difficile by different species of animals has led to speculation that animals could represent a reservoir of this pathogen for human infections. The objective of this study was to compare C. difficile isolates from humans, dogs, and cattle from a restricted geographic area. Methods: C. difficile isolates from 36 dogs and 15 dairy calves underwent whole genome sequencing, and phenotypic assays assessing growth and virulence were performed. Genomes of animal-derived isolates were compared to 29 genomes of isolates from a pediatric population as well as 44 reference genomes. Results: Growth rates and relative cytotoxicity of isolates were significantly higher and lower, respectively, in bovine-derived isolates compared to pediatric- and canine-derived isolates. Analysis of core genes showed clustering by host species, though in a few cases, human strains co-clustered with canine or bovine strains, suggesting possible interspecies transmission. Geographic differences (e.g., farm, litter) were small compared to differences between species. In an analysis of accessory genes, the total number of genes in each genome varied between host species, with 6.7% of functional orthologs differentially present/absent between host species and bovine-derived strains having the lowest number of genes. Canine-derived isolates were most likely to be non-toxigenic and more likely to carry phages. A targeted study of episomes identified in local pediatric strains showed sharing of a methicillin-resistance plasmid with dogs, and historic sharing of a wide range of episomes across hosts. Bovine-derived isolates harbored the widest variety of antibiotic-resistance genes, followed by canine Conclusions: While C. difficile isolates mostly clustered by host species, occasional co-clustering of canine and pediatric-derived isolates suggests the possibility of interspecies transmission. The presence of a pool of resistance genes in animal-derived isolates with the potential to appear in humans given sufficient pressure from antibiotic use warrants concern.
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Affiliation(s)
- L E Redding
- Department of Clinical Studies-New Bolton Center, University of Pennsylvania, School of Veterinary Medicine, Kennett Square, PA, 19348, USA.
| | - V Tu
- Division of Gastroenterology, Hepatology, and Nutrition, Children's Hospital of Philadelphia, PA, 19104, USA
| | - A Abbas
- Division of Protective Immunity, Children's Hospital of Philadelphia, Philadelphia, PA, 19104, USA
| | - M Alvarez
- Division of Protective Immunity, Children's Hospital of Philadelphia, Philadelphia, PA, 19104, USA
| | - J P Zackular
- Division of Protective Immunity, Children's Hospital of Philadelphia, Philadelphia, PA, 19104, USA; Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA
| | - C Gu
- Department of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA
| | - F D Bushman
- Department of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA
| | - D J Kelly
- Department of Clinical Studies-New Bolton Center, University of Pennsylvania, School of Veterinary Medicine, Kennett Square, PA, 19348, USA
| | - D Barnhart
- Department of Clinical Studies-New Bolton Center, University of Pennsylvania, School of Veterinary Medicine, Kennett Square, PA, 19348, USA
| | - J J Lee
- Division of Gastroenterology, Hepatology, and Nutrition, Children's Hospital of Philadelphia, PA, 19104, USA
| | - K L Bittinger
- Division of Gastroenterology, Hepatology, and Nutrition, Children's Hospital of Philadelphia, PA, 19104, USA
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Jeong K, Abbas A, Shin J, Son M, Kim YM, Cho KH. Prediction of biogas production in anaerobic co-digestion of organic wastes using deep learning models. Water Res 2021; 205:117697. [PMID: 34600230 DOI: 10.1016/j.watres.2021.117697] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2021] [Revised: 08/24/2021] [Accepted: 09/20/2021] [Indexed: 05/25/2023]
Abstract
Interest in anaerobic co-digestion (AcoD) has increased significantly in recent decades owing to enhanced biogas productivity due to the utilization of different organic wastes, such as food waste and sewage sludge. In this study, a robust AcoD model for biogas prediction is developed using deep learning (DL). We propose a hybrid DL architecture, i.e., DA-LSTM-VSN, wherein a dual-stage-attention (DA)-based long short-term memory (LSTM) network is integrated with variable selection networks (VSNs). To enhance the model predictability, we perform hyperparameter optimization. The model accuracy is validated using long-term AcoD monitoring data measured over two years of municipal wastewater treatment plant operation and then compared with those of two other DL-based models (i.e., DA-LSTM and the standard LSTM). In addition, the feature importance (FI) is analyzed to investigate the relative contribution of input variables to biogas production prediction. Finally, we demonstrate the successful application of the validated DL model to the AcoD process optimization. Results show that the model accuracy improved significantly by incorporating DA into LSTM, i.e., the coefficient of determination (R2) increased from 0.38 to 0.68; however, the R2 can be further increased to 0.76 by combining DA-LSTM with a VSN. For the biogas prediction of the AcoD model, the VSN contributes significantly by employing the discontinuous time series of measurement data on biodegradable organic-associated variables during AcoD. In addition, the VSN allows the AcoD model to be interpretable via FI analysis using its weighted input features. The FI results show that the relative importance is vital to variables associated with food waste leachate, whereas it is marginal for those associated with the primary and chemically assisted sedimentation sludges. In conclusion, the AcoD model proposed herein can be utilized in practical applications as a robust tool because it can provide the optimal sludge conditions to improve biogas production. This is because it facilitates the time-series biogas prediction at the full scale using unprocessed datasets with either missing value imputation or outlier removal.
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Affiliation(s)
- Kwanho Jeong
- Department of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, Ulsan 689-798, South Korea
| | - Ather Abbas
- Department of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, Ulsan 689-798, South Korea
| | - Jingyeong Shin
- Department of Civil and Environmental Engineering, Hanyang University, Seongdong-gu, Seoul, 04763, South Korea
| | - Moon Son
- Department of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, Ulsan 689-798, South Korea
| | - Young Mo Kim
- Department of Civil and Environmental Engineering, Hanyang University, Seongdong-gu, Seoul, 04763, South Korea.
| | - Kyung Hwa Cho
- Department of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology, Ulsan 689-798, South Korea.
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Ramirez J, Jones C, Gourbault L, Hurst W, Abbas A, Zucker B, Shah M, Scroggie D. 1158 Summarising the Reporting of Study Outcomes in Robotic Oesophagectomy: A Systematic Review. Br J Surg 2021. [DOI: 10.1093/bjs/znab259.795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
Abstract
Introduction
There is an increasing adoption of robotic oesophagectomy in place of standard techniques for oesophageal cancer resection. This is potentially due to its perceived technical benefits and improved short-term outcomes. Consistency in outcome selection, definition and reporting between studies is required for effective evidence synthesis and prevention of research waste. The aim of this review is to perform an in-depth analysis of outcome reporting in robotic oesophagectomy.
Method
Systematic searches were conducted using key words for robotic surgery and oesophageal cancer, from inception to February 2020. Studies reporting any outcome for robotic oesophagectomy were included. Outcomes in each study were recorded verbatim and categorised into twelve domains. Outcomes were independently categorised by two reviewers. Where reported, the follow-up period was also recorded.
Results
Of 954 abstracts screened, 226 full texts were reviewed and 102 included. Only one study was a RCT. A total of 1422 outcomes were reported. Each study had a median of 14 reported outcomes (range 1-25). Outcomes related to complications (n = 578, 99 studies), technical/operative factors (n = 290, 90 studies), and pathology (e.g., resection margin) (n = 197, 83 studies) were reported most frequently. No single outcome, or outcome domain was reported in all studies. No studies used a core outcome set for reporting. Forty-five studies stated a follow-up period, ranging from <1 month to 58 months.
Conclusions
There is significant heterogeneity in the selection and reporting of outcomes in robotic oesophagectomy. This calls for the use of a core outcome set to allow standardisation and transparency of outcome reporting.
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Affiliation(s)
- J Ramirez
- University Hospitals Bristol and Weston NHS Foundation Trust, Bristol, United Kingdom
- University of Bristol, Bristol, United Kingdom
| | - C Jones
- University of Bristol, Bristol, United Kingdom
- North Bristol NHS Trust, Bristol, United Kingdom
| | - L Gourbault
- University Hospitals Bristol and Weston NHS Foundation Trust, Bristol, United Kingdom
| | - W Hurst
- North Bristol NHS Trust, Bristol, United Kingdom
| | - A Abbas
- University of Bristol, Bristol, United Kingdom
| | - B Zucker
- University Hospitals Bristol and Weston NHS Foundation Trust, Bristol, United Kingdom
- University of Bristol, Bristol, United Kingdom
| | - M Shah
- University of Bristol, Bristol, United Kingdom
| | - D Scroggie
- University of Bristol, Bristol, United Kingdom
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20
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Yi X, Rehman A, Akhtar R, Abbas A, Hussain K, Yasin R, Ishaq H, Abbas R, Raza M, Hu H, Li G. Effects on egg production and quality of supplementing drinking water with calcium and magnesium. S AFR J ANIM SCI 2021. [DOI: 10.4314/sajas.v51i4.7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
This study was conducted to appraise the effects on egg quality and production performance of laying hens when drinking water was supplemented with calcium (Ca) and magnesium (Mg). A total of 384 (64-week-old) Hy-line Brown laying hens were assigned at random to four treatments, which consisted of CON: unsupplemented drinking water; T1: drinking water + 2 mg/L Ca + 250 mg/L Mg; T2: drinking water + 4 mg/L Ca + 510 mg/L Mg /10 L; and T3: drinking water + 5 mg/L Ca and 760 mg/L Mg. The experiment lasted six weeks. Water intake increased linearly in week 1 with the rising levels of Ca and Mg in the drinking water. Increasing the Ca and Mg levels improved eggshell strength (week 2 (P =0.01), week 5 (P =0.01), and week 6 (P = 0.03), and eggshell thickness (week 6) (P =0.02) and reduced the rate at which eggs were broken (week 4) (P =0.01). The supplemental Ca and Mg did not affect egg production, egg weight, Haugh unit, albumen height, eggshell colour, and yolk colour compared with CON. Nor did they influence the Haugh unit and albumen height after storing for 1, 5, 10 and 15 days. In conclusion, adding Ca and Mg to the drinking water increased the thickness and strength of the eggshells.
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Zheng A, Kira M, Adam RD, Papageorgiou P, Shambrook J, Abbas A, Vedwan K, Long J, Walkden M, Harden S, Peebles C, Flett AS. Characteristics and long-term outcomes of patients with reduced ejection fraction referred for adenosine stress perfusion cardiac magnetic resonance imaging. Eur Heart J Cardiovasc Imaging 2021. [DOI: 10.1093/ehjci/jeab090.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Funding Acknowledgements
Type of funding sources: None.
Background
Adenosine stress perfusion has been shown to be of minimal incremental benefit in distinguishing between ischaemic and non-ischaemic aetiology of severe left ventricular systolic dysfunction (LVSD) over and above that obtained from Cardiac Magnetic Resonance (CMR) with Late Gadolinium Enhancement (LGE). Stress CMR has, however, been shown to be effective in risk-stratifying LVSD patients, with ischaemia being an independent predictor of cardiovascular death or myocardial infarction (MI) and associated with higher rates of further intervention.
Purpose
Evaluate real world data from a single tertiary UK cardiac MRI centre to determine the characteristics and long-term clinical outcomes of patients with LVSD referred for stress CMR.
Methods
As part of an ongoing registry, all consenting patients with Ejection Fraction (EF) ≤40% and a completed adenosine stress perfusion CMR between January 2015 and December 2019 were included with prospective baseline data collection. All-cause mortality and cardiac hospitalisation, coronary angiography/revascularisation was determined from electronic hospital records. Outcomes were compared between the inducible ischaemia vs. no ischaemia groups, and LGE present vs. no LGE groups using chi square.
Results
The sample included 86 patients. The mean EF was 32 ± 6%. Median follow up was 3.8 years (range 41-2222 days). The indications for CMR were: 30 (35%) assess ischaemia, 35 (41%) assess LVSD aetiology and 21 (24%) LVSD assess viability.
Inducible ischemia was present in 30 (35%) patients and absent in 56 (65%). Patient characteristics and outcomes are shown in Table 1. Baseline characteristics were similar between the groups but there was a higher rate of hypertension and ischaemic heart disease in the ischaemia group. There was a non-significant difference in combined mortality and cardiac hospitalisation rates between the groups (40% vs. 27% p = 0.20).
LGE was present in 69 (80%) patients (28 with ischaemia; 41 without) and absent in 17 (20%, 2 with ischaemia, 15 without). The event rate was 23 (33%) vs. 4 (24%) between LGE vs. No LGE groups (p = 0.44). Of the 15 patients (17%) with no LGE or ischaemia; 2 died and 1 was hospitalised, there were no MI"s and no Percutaneous Coronary Intervention (PCI).
The lack of statistical difference in event rates between ischaemia and no ischaemia groups may be due to our relatively small sample size or could reflect the effectiveness of contemporary disease modifying treatment for Heart Failure with reduced EF.
Conclusion
This real-world data supports published findings that in patients with LVSD and no LGE on CMR, ischaemia is very uncommon and stress CMR is unlikely to increase diagnostic yield. Conversely, if stress CMR is performed and ischaemia is absent, incidence of subsequent angiography and revascularisation is very low, which is reassuring in clinical practice. In those patients without ischaemia and LGE, likelihood of MI is low.
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Affiliation(s)
- A Zheng
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - M Kira
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - RD Adam
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - P Papageorgiou
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - J Shambrook
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - A Abbas
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - K Vedwan
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - J Long
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - M Walkden
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - S Harden
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - C Peebles
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - AS Flett
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
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McGillivray E, Jain R, Ramamurthy C, Sheng J, Granina E, Yu D, Lu X, Abbas A, Dotan E, Meyer J, Fang C, Denlinger C. P-103 Associations between quality-of-life, symptom burden, and demographic characteristics in long-term esophageal and gastroesophageal junction cancer survivors. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.05.158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
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23
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Jang J, Abbas A, Kim M, Shin J, Kim YM, Cho KH. Prediction of antibiotic-resistance genes occurrence at a recreational beach with deep learning models. Water Res 2021; 196:117001. [PMID: 33744657 DOI: 10.1016/j.watres.2021.117001] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Revised: 02/27/2021] [Accepted: 03/01/2021] [Indexed: 06/12/2023]
Abstract
Antibiotic resistance genes (ARGs) have been reported to threaten the public health of beachgoers worldwide. Although ARG monitoring and beach guidelines are necessary, substantial efforts are required for ARG sampling and analysis. Accordingly, in this study, we predicted ARGs occurrence that are primarily found on the coast after rainfall using a conventional long short-term memory (LSTM), LSTM-convolutional neural network (CNN) hybrid model, and input attention (IA)-LSTM. To develop the models, 10 categories of environmental data collected at 30-min intervals and concentration data of 4 types of major ARGs (i.e., aac(6'-Ib-cr), blaTEM, sul1, and tetX) obtained at the Gwangalli Beach in South Korea, between 2018 and 2019 were used. When individually predicting ARGs occurrence, the conventional LSTM and IA-LSTM exhibited poor R2 values during training and testing. In contrast, the LSTM-CNN exhibited a 2-6-times improvement in accuracy over those of the conventional LSTM and IA-LSTM. However, when predicting all ARGs occurrence simultaneously, the IA-LSTM model exhibited a superior performance overall compared to that of LSTM-CNN. Additionally, the influence of environmental variables on prediction was investigated using the IA-LSTM model, and the ranges of input variables that affect each ARG were identified. Consequently, this study demonstrated the possibility of predicting the occurrence and distribution of major ARGs at the beach based on various environmental variables, and the results are expected to contribute to management of ARG occurrence at a recreational beach.
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Affiliation(s)
- Jiyi Jang
- Department of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology (UNIST), 50, UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 South Korea
| | - Ather Abbas
- Department of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology (UNIST), 50, UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 South Korea
| | - Minjeong Kim
- Division of Radioactive Waste Disposal Research, Korea Atomic Energy Research Institute (KAERI), 989-111, Daedeok-daero, Yuseong-gu, Daejeon, 34057, South Korea
| | - Jingyeong Shin
- Department of Civil and Environmental Engineering, Hanyang University, 222, Wangsimni-ro, Seongdong-gu, Seoul, 04763, South Korea
| | - Young Mo Kim
- Department of Civil and Environmental Engineering, Hanyang University, 222, Wangsimni-ro, Seongdong-gu, Seoul, 04763, South Korea
| | - Kyung Hwa Cho
- Department of Urban and Environmental Engineering, Ulsan National Institute of Science and Technology (UNIST), 50, UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 South Korea.
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24
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Abbas A, Turner N, MacNeill F. Managing breast gangrene during the COVID-19 pandemic. Ann R Coll Surg Engl 2021; 103:e141-e143. [PMID: 33682434 DOI: 10.1308/rcsann.2020.7068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
At the onset of the COVID-19 crisis, a 63-year-old woman with multiple life-limiting comorbidities was referred with a necrotic infected left breast mass on a background of breast cancer treated with conservation surgery and radiotherapy 22 years previously. The clinical diagnosis was locally advanced breast cancer, but four separate biopsies were non-diagnostic. Deteriorating renal function and incipient sepsis and endocarditis resulted in urgent salvage mastectomy during the peak of the COVID19 pandemic. The final diagnosis was infected ischaemic/infarcted breast (wet gangrene) secondary to vascular insufficiency related to diabetes, cardiac revascularisation surgery and breast radiotherapy.
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Affiliation(s)
- A Abbas
- The Royal Marsden NHS Foundation Trust, UK
| | - N Turner
- The Royal Marsden NHS Foundation Trust, UK
| | - F MacNeill
- The Royal Marsden NHS Foundation Trust, UK
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25
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Bus SRM, Zambreanu L, Abbas A, Rajabally YA, Hadden RDM, de Haan RJ, de Borgie CAJM, Lunn MP, van Schaik IN, Eftimov F. Intravenous immunoglobulin and intravenous methylprednisolone as optimal induction treatment in chronic inflammatory demyelinating polyradiculoneuropathy: protocol of an international, randomised, double-blind, placebo-controlled trial (OPTIC). Trials 2021; 22:155. [PMID: 33608058 PMCID: PMC7894234 DOI: 10.1186/s13063-021-05083-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Accepted: 01/29/2021] [Indexed: 11/28/2022] Open
Abstract
Background International guidelines recommend either intravenous immunoglobulin (IVIg) or corticosteroids as first-line treatment for chronic inflammatory demyelinating polyradiculoneuropathy (CIDP). IVIg treatment usually leads to rapid improvement and is generally safe, but does not seem to lead to long-term remissions. Corticosteroids act more slowly and are associated with more side effects, but may induce long-term remissions. The hypothesis of this study is that combined IVIg and corticosteroid induction treatment will lead to more frequent long-term remissions than IVIg treatment alone. Methods An international, randomised, double-blind, placebo-controlled trial, in adults with ‘probable’ or ‘definite’ CIDP according to the EFNS/PNS 2010 criteria. Three groups of patients are included: (1) treatment naïve, (2) known CIDP patients with a relapse after > 1 year without treatment, and (3) patients with CIDP who improved within 3 months after a single course of IVIg, who subsequently deteriorate at any interval without having received additional treatment. Patients are randomised to receive 7 courses of IVIg and 1000 mg intravenous methylprednisolone (IVMP) (in sodium chloride 0.9%) or IVIg and placebo (sodium chloride 0.9%), every 3 weeks for 18 weeks. IVIg treatment consists of a loading dose of 2 g/kg (over 3–5 days) followed by 6 courses of IVIg 1/g/kg (over 1–2 days). The primary outcome is remission at 1 year, defined as improvement in disability from baseline, sustained between week 18 and week 52 without further treatment. Secondary outcomes include changes in disability, impairment, pain, fatigue, quality of life, care use and costs and (long-term) safety. Discussion In case of superiority of the combined treatment, patients will experience the advantages of two proven efficacious treatments, namely rapid improvement due to IVIg and long-term remission due to corticosteroids. Long-term remission would reduce the need for maintenance IVIg treatment and may decrease health care costs. Additionally, we expect that the combined treatment leads to a higher proportion of patients with improvement as some patients who do not respond to IVIg will respond to corticosteroids. Risks of short and long-term additional adverse events of the combined treatment need to be assessed. Trial registration ISRCTN registry ISRCTN15893334. Prospectively registered on 12 February 2018.
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Affiliation(s)
- S R M Bus
- Department of Neurology, Amsterdam Neuroscience, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - L Zambreanu
- Department of Neurology, National Hospital for Neurology and Neurosurgery, Centre for Neuromuscular Disease, London, UK
| | - A Abbas
- Department of Neurology, University Hospitals of Birmingham, Regional Neuromuscular Service, Birmingham, UK
| | - Y A Rajabally
- Department of Neurology, University Hospitals of Birmingham, Regional Neuromuscular Service, Birmingham, UK
| | - R D M Hadden
- Department of Neurology, King's College Hospital, London, UK
| | - R J de Haan
- Clinical Research Unit, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - C A J M de Borgie
- Clinical Research Unit, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
| | - M P Lunn
- Department of Neurology, National Hospital for Neurology and Neurosurgery, Centre for Neuromuscular Disease, London, UK
| | - I N van Schaik
- Department of Neurology, Amsterdam Neuroscience, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.,Spaarne Gasthuis, Haarlem, the Netherlands
| | - F Eftimov
- Department of Neurology, Amsterdam Neuroscience, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
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Hussain K, Abbas RZ, Abbas A, Rehman MA, Raza MA, Rehman T, Hussain R, Mahmood MS, Imran M, Zaman MA, Sindhu ZD, Khan MK, Ali S. Anticoccidial and Biochemical Effects of Artemisia Brevifolia Extract in Broiler Chickens. Braz J Poult Sci 2021. [DOI: 10.1590/1806-9061-2020-1377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- K Hussain
- Muhammad Nawaz Sharif University of Agriculture, Pakistan
| | - RZ Abbas
- University of Agriculture, Pakistan
| | - A Abbas
- Muhammad Nawaz Sharif University of Agriculture, Pakistan
| | | | - MA Raza
- Muhammad Nawaz Sharif University of Agriculture, Pakistan
| | - T Rehman
- The Islamia University of Bahawalpur, Pakistan
| | - R Hussain
- The Islamia University of Bahawalpur, Pakistan
| | | | - M Imran
- University of Agriculture, Pakistan
| | - MA Zaman
- University College of Veterinary and Animal Sciences, Pakistan
| | | | - MK Khan
- University of Agriculture, Pakistan
| | - S Ali
- University of Agriculture, Pakistan
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27
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Ternacle J, Guimaraes L, Vincent F, Côté N, Côté M, Lachance D, Clavel M, Abbas A, Pibarot P, Rodes-Cabau J. Reclassification of prosthesis-patient mismatch after transcatheter aortic valve replacement using predicted versus measured indexed effective orifice area. Archives of Cardiovascular Diseases Supplements 2021. [DOI: 10.1016/j.acvdsp.2020.10.156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Abdel Ghany M, Rashed M, Abbas A, Youssef A, Sayed M. Severe preeclampsia is associated with postpartum diastolic dysfunction and non-dipping blood pressure profile pattern. Eur Heart J 2020. [DOI: 10.1093/ehjci/ehaa946.3302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Background
Left ventricular diastolic dysfunction and non-dipping profile, detected by ambulatory blood pressure monitoring (ABPM), are two features recorded to be associated with sustained hypertension. Both are predictors of an increased cardiovascular morbidity later in life. Complete normalization of blood pressure (BP) in preeclampsia is detected over a variable period of time.
Methods
A prospective cohort study was conducted in a tertiary university hospital including normotensive women with a history of preeclampsia in the current pregnancy enrolled within the first week postpartum. All cases were subjected to 24 h-ABPM and 2D trans-thoracic echocardiography three months post postpartum concomitantly with a clinical evaluation. Chi2-test was used to compare the qualitative data while student t-test was used to compare the quantitative data. Multivariate regression analysis was used for prediction of non-dippers and diastolic dysfunction in our cohort.
Results
Hundred twenty eight women were included in the study. Their mean age was 28.6±5.1 years and the mean basal BP was 123.1±6.4/74.6±5.9 mm Hg. Out of the studied women, 90 (70.3%) women were dippers and 38 (29.7%) women were non-dippers. It was noticed that diastolic dysfunction was presented in 28 (73.7%) of non-dippers while none of dippers had diastolic dysfunction. Women with severe preeclampsia had higher frequency of non-dipper (35.5% vs. 24.2%; P=0.02) and diastolic dysfunction (29% vs. 15%; P=0.01) in comparison to those women with mild preeclampsia. Severe preeclampsia and previous history of preeclampsia were significant predictors for non-dipping status (OR=1.1, 95% CI: 0.05–10.56 and 1.4, 95% CI: 0.30–4.26 respectively, R2 = 0.7; P<0.001). They were also predictors for diastolic dysfunction in our studied population (OR = 1.6, 95% CI: 1.1–2.2 and 1.3, 95% CI: 1.2–2.2 respectively, R2 = 0.6; P<0.05).
Conclusion
Women with a history of preeclampsia have the risk for developing cardiovascular events later in life. The severity and recurrence of preeclampsia were significant predictors for both non-dipping profile and diastolic dysfunction.
Funding Acknowledgement
Type of funding source: Public hospital(s). Main funding source(s): Orman Heart Hospital-Assiut University; Women Health Hospital-Assiut University
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Affiliation(s)
- M Abdel Ghany
- Assiut University, Cardiovascular medicine department, Assiut, Egypt
| | - M Rashed
- Assiut University, Cardiovascular medicine department, Assiut, Egypt
| | - A Abbas
- Assiut University, Obstetrics and Gynecology department, Assiut, Egypt
| | - A.M.R Youssef
- Assiut University, Cardiovascular medicine department, Assiut, Egypt
| | - M Sayed
- Assiut University, Cardiovascular medicine department, Assiut, Egypt
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Shetty S, Malik H, Abbas A, Ying Y, Aronow W, Briasoulis A. Impact of acute kidney injury on in-hospital outcomes among patients hospitalized with acute heart failure: a propensity score matched analysis. Eur Heart J 2020. [DOI: 10.1093/ehjci/ehaa946.1247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Background
Acute kidney injury (AKI) is frequently present in patients admitted for acute heart failure (AHF). Several studies have evaluated the mortality risk and have concluded poor prognosis in any patient with AKI admitted for AHF. For the most part, the additional morbidity and mortality burden in AHF patients with AKI has been attributed to the concomitant comorbidities, and/or interventions.
Purpose
We sought to determine the impact of acute kidney injury (AKI) on in-hospital outcomes in patients presenting with acute heart failure (AHF). We identified isolated AKI patients after excluding other concomitant diagnoses and procedures, which may contribute to an increased risk of mortality and morbidity.
Methods
Data from the National Inpatient Sample (2012- 14) were used to identify patients with the principal diagnosis of AHF and the concomitant secondary diagnosis of AKI. Propensity score matching was performed on 30 baseline variables to identify a matched cohort. The outcome of interest was in-hospital mortality. We further evaluated in-hospital procedures and complications.
Results
Of 1,470,450 patients admitted with AHF, 24.3% had AKI. After propensity matching a matched cohort of 356,940 patients was identified. In this matched group, the AKI group had significantly higher in-hospital mortality (3.8% vs 1.7%, p<0.001). Complications such as sepsis and cardiac arrest were higher in the AKI group. Similarly, in-hospital procedures including CABG, mechanical ventilation and IABP were performed more in the AKI group. AHF patients with AKI had longer in-hospital stay of ∼1.7 days.
Conclusions
In a propensity score-matched cohort of AHF with and without AKI, the risk of in-hospital mortality was >2-fold in the AKI group. Healthcare utilization and burden of complications were higher in the AKI group.
Funding Acknowledgement
Type of funding source: None
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Affiliation(s)
- S Shetty
- University of Iowa, Iowa city, United States of America
| | - H Malik
- New York Medical College, Internal Medicine, Valhalla, United States of America
| | - A Abbas
- University of Iowa, Iowa city, United States of America
| | - Y Ying
- University of Iowa, Iowa city, United States of America
| | - W Aronow
- New York Medical College, Internal Medicine, Valhalla, United States of America
| | - A Briasoulis
- University of Iowa, Iowa city, United States of America
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Olabi B, Abbas A, Shah J, Tidman MJ, Ayob S, Abhishek A. Multicentric reticulohistiocytosis: an association with chronic sagittal sinus thrombosis. Clin Exp Dermatol 2020; 46:554-556. [PMID: 32875639 DOI: 10.1111/ced.14433] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2020] [Accepted: 08/25/2020] [Indexed: 01/09/2023]
Affiliation(s)
- B Olabi
- Department of Dermatology, Lauriston Building, Edinburgh, UK
| | - A Abbas
- Histopathology Department, Queen's Medical Centre, Nottingham, UK
| | - J Shah
- Departments of, Department of, Radiology, Nottingham University Hospitals NHS Trust, Nottingham, UK
| | - M J Tidman
- Department of Dermatology, Lauriston Building, Edinburgh, UK
| | - S Ayob
- Department of, Dermatology, NHS Treatment Centre, Nottingham, UK
| | - A Abhishek
- Academic Rheumatology, Clinical Sciences Building, City Hospital Nottingham, Nottingham, UK.,Nottingham NIHR-BRC, Nottingham, UK.,Department of Rheumatology, Queens Medical Centre, Nottingham, UK
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Lescanne E, van der Mee-Marquet N, Juvanon JM, Abbas A, Morel N, Klein JM, Hanau M, Couloigner V. Best practice recommendations: ENT consultations during the COVID-19 pandemic. Eur Ann Otorhinolaryngol Head Neck Dis 2020; 137:303-308. [PMID: 32419879 PMCID: PMC7225709 DOI: 10.1016/j.anorl.2020.05.007] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
These best practice recommendations for ENT consultations during the COVID-19 pandemic have been drawn up because ENT examinations and treatments are at risk of contamination by the SARS-Cov-2 virus in certain instances. Thus, ENT specialists are among the professionals who are most exposed to this infection. During the pandemic, insofar as an asymptomatic patient may be infected and contagious, the same precautions must be employed whether the patient is ill with, suspected of having, or without any clinical evidence of COVID-19 infection. According to the scientific data available, the examinations and procedures potentially exposing to projections/aerosolizations of organic material of human origin are considered to be at risk of staff contamination. For ENT examinations and procedures without exposure to such projections/aerosolizations, the professional is advised to a long sleeve clean outfit, a surgical mask and gloves in case of contact with the patient's mucosa. ENT examinations and procedures with exposure to these projections/aerosolizations require the so-called "airborne", "contact", and "droplets" additional precautions: FFP2/N95 respiratory protection device, eye protection, disposable headwear and long sleeve overgown.
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Affiliation(s)
- E Lescanne
- Department of Otorhinolaryngology, Head and Neck Surgery, Tours University Hospital, Tours, France.
| | - N van der Mee-Marquet
- Support Centre for the Prevention of Healthcare-associated Infections (CPias Centre Val de Loire), Tours University Hospital, Tours, France
| | | | | | - N Morel
- ENT practice, Echirolles, France
| | - J-M Klein
- French National Professional ENT Council (CNPORL), Paris, France
| | - M Hanau
- ENT practice, Amiens, France
| | - V Couloigner
- Department of Otorhinolaryngology, Head and Neck Surgery, hôpital Necker-Enfants Malades, Assistance publique-Hôpitaux de Paris, Paris, France
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Hamilton NE, Adam GH, Ifan DL, Lam SS, Johnson K, Vedwan KAG, Shambrook JS, Peebles CR, Harden SP, Abbas A. Diagnostic utility of additional whole-chest CT as part of an acute abdominal pain CT imaging pathway during the COVID-19 pandemic. Clin Radiol 2020; 75:592-598. [PMID: 32546365 PMCID: PMC7280125 DOI: 10.1016/j.crad.2020.06.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Accepted: 06/03/2020] [Indexed: 12/30/2022]
Abstract
AIM To evaluate the diagnostic utility of additional whole-chest computed tomography (CT) in identifying otherwise unheralded COVID-19 lung disease as part of an acute abdominal pain CT imaging pathway in response to the COVID-19 pandemic. MATERIALS AND METHODS Consecutive patients (n=172) who underwent additional whole-chest CT via a COVID-19 acute abdominal pain CT imaging pathway between 27 March and 3 May 2020 were evaluated in this retrospective single-centre study. Chest CT examinations were graded as non-COVID-19, indeterminate for, or classic/probable for COVID-19. CT examinations in the latter two categories were further divided into one of three anatomical distributions (lung base, limited chest [below carina], whole chest [above carina]) based on location of findings. Reverse transcriptase-polymerase chain reaction (RT-PCR) results and clinical features of COVID-19 were assessed to determine if COVID-19 was clinically suspected at the time of CT referral. RESULTS Twenty-seven of the 172 (15.7%) patients had CT features potentially indicative of COVID-19 pneumonia, 6/27 (3.5%) demonstrating a classic/probable pattern and 21/27 (12.2%) demonstrating an indeterminate pattern. After correlation with clinical features and RT-PCR 8/172 (4.7%) were defined as COVID-19 positive, of which only 1/172 (0.6%) was clinically unsuspected of COVID-19 at the time of CT referral. All COVID-19 positive cases could be identified on review of the lung base alone. CONCLUSION Whole-chest CT as part of an acute abdominal pain CT imaging pathway has a very low diagnostic yield for our cohort of patients. All COVID-19-positive patients in our cohort were identified on review of the lung bases on the abdominal CT and this offers an alternative imaging approach in this patient group.
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Affiliation(s)
- N E Hamilton
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - G H Adam
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - D L Ifan
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - S S Lam
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - K Johnson
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK; Department of Radiology, Salisbury District Hospital, Odstock Rd, Salisbury SP2 8BJ, UK
| | - K A G Vedwan
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - J S Shambrook
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - C R Peebles
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - S P Harden
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK
| | - A Abbas
- Department of Radiology, University Hospital Southampton NHS Foundation Trust, Tremona Road, Southampton SO16 6YD, UK.
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Abbas A, Akintoye E, Duque ER, Briasoulis A, Alvarez P. Relationship between NT-pro Brain Natriuretic Peptide and Filling Pressures in Ambulatory Patients with Left Ventricular Assist Devices and Accuracy to Detect Need for Optimization. J Heart Lung Transplant 2020. [DOI: 10.1016/j.healun.2020.01.390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Koh SM, Chan CK, Teo SH, Singh S, Merican A, Ng WM, Abbas A, Kamarul T. Elevated plasma and synovial fluid interleukin-8 and interleukin-18 may be associated with the pathogenesis of knee osteoarthritis. Knee 2020; 27:26-35. [PMID: 31917106 DOI: 10.1016/j.knee.2019.10.028] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Revised: 10/06/2019] [Accepted: 10/31/2019] [Indexed: 02/02/2023]
Abstract
PURPOSE Osteoarthritis (OA) of the knee is a multifactorial degenerative disease typically defined as the 'wear and tear' of articular joint cartilage. However, recent studies suggest that OA is a disease arising from chronic low-grade inflammation. We conducted a study to investigate the relationship between chronic inflammatory mediators present in both the systemic peripheral blood system and localised inflammation in synovial fluid (SF) of OA and non-OA knees; and subsequently made direct comparative analyses to understand the mechanisms that may underpin the processes involved in OA. METHODS 20-Plex proteins were quantified using Human Magnetic Luminex® assay (R&D Systems, USA) from plasma and SF of OA (n = 14) and non-OA (n = 14) patients. Ingenuity Pathway Analysis (IPA) software was used to predict the relationship and possible interaction of molecules pertaining to OA. RESULTS There were significant differences in plasma level for matrix metalloproteinase (MMP)-3, interleukin (IL)-27, IL-8, IL-4, tumour necrosis factor-alpha, MMP-1, IL-15, IL-21, IL-10, and IL-1 beta between the groups, as well as significant differences in SF level for IL-15, IL-8, vascular endothelial growth factor (VEGF), MMP-1, and IL-18. Our predictive OA model demonstrated that toll-like receptor (TLR) 2, macrophage migration inhibitory factor (MIF), TLR4 and IL-1 were the main regulators of IL-1B, IL-4, IL-8, IL-10, IL-15, IL-21, IL-27, MMP-1 and MMP-3 in the plasma system; whilst IL-1B, TLR4, IL-1, and basigin (BSG) were the regulators of IL-4, IL-8, IL-10, IL-15, IL-18, IL-21, IL-27, MMP-1, and MMP-3 in the SF system. CONCLUSION The elevated plasma IL-8 and SF IL-18 may be associated with the pathogenesis of OA via the activation of MMP-3.
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Affiliation(s)
- S M Koh
- Tissue Engineering Group (TEG), Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - C K Chan
- Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - S H Teo
- Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - S Singh
- Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - A Merican
- Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - W M Ng
- Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - A Abbas
- Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
| | - T Kamarul
- Tissue Engineering Group (TEG), Department of Orthopaedic Surgery (NOCERAL), Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia.
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Alhaddad A, Abdel Kawy H, Ramadan W, Abbas A. Hepatoprotective Effects of Suberoylanilide Hydroxamic Acid (A Histone Deacetylase Inhibitor) in Immunological Liver Injury in Rats. JPRI 2019. [DOI: 10.9734/jpri/2019/v30i330271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
One of the main reasons for the development of chronic liver disease is autoimmune hepatitis (AIH). There is no clear etiological factor for AIH occurrence and no drug has been approved for its treatment. Vorinostat, a Histone deacetylase inhibitor (HDACi) has been shown to reduce inflammation. Our aim was to explore the therapeutic potential of vorinostat in a rat model of AIH induced by Concanavalin A (Con A). The rats were randomly divided into 4 groups; control group, con A (20 mg/kg/iv/wk) group, vorinostat (15 mg/kg/day p.o) group and Con A with vorinostat group. Blood and liver samples were collected at the end of the fourth and eighth weeks for biochemical and histopathological examinations. Results revealed that administration of Con A elevated aspartate aminotransferase (AST) and alanine aminotransferase (ALT) liver enzymes, which were reduced to 52.8% and to 61.8% respectively on simultaneous administration of Vorinostat as compare to Con A group. Furthermore, Vorinostat reduced fibrosis and diminished apoptosis as deduced by the decrease in the hepatic hydroxyproline content of the liver and tumor necrosis factor-alpha levels. Relative gene expression analysis of interleukin 1b and transforming growth factor beta were significantly decreased in groups treated with vorinostat. Histopathological analysis showed that administration of vorinostat significantly restored the well organized structure of the liver, decreased initial inflammation produced by Con A, reduced liver fibrosis and mitigated hepatic stellate cell’s activities. In conclusion, administration of vorinostat in Con A model of autoimmune hepatitis, significantly decreased liver inflammation and fibrosis. So vorinostat might show a novel therapeutic approach for management of autoimmune hepatitis and its obstacles.
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Youssef G, Mekkawy D, El-Fayoumy N, Abbas A, Allam M. P1817Assessment of carotid stiffness indices in patients with ischemic stroke. Eur Heart J 2019. [DOI: 10.1093/eurheartj/ehz748.0569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Background
Arterial stiffness is considered as an emerging new important risk factor for stoke development. Measuring carotid stiffness is easy and non-invasive and thus can be widely applicable.
Purpose
To evaluate the carotid stiffness indices in patients with ischemic stroke compared to normal healthy subjects.
Methods
Included in this study are 60 patients (group 1) with ischemic stroke and 60 healthy control subjects (group 2). Participants were exposed to routine clinical examination and Duplex assessment of both carotid arteries. A specific wall tracking system was used for the semiautomatic calculation of the carotid stiffness indices, which included; compliance coefficient (CC), distensibility coefficient (DC), carotid pulse wave velocity (PWV) and carotid intima media thickness (IMT). Results from both carotid arteries were averaged and data from group 1 patients were compared to group 2 subjects.
Results
The mean age was (60.1±6.9 years) in group 1 compared to (60.1±6.6 years) in group 2 (p=0.9). A significant difference was found between both groups in all carotid stiffness indices; including average CC (0.64±0.29 vs 0.82±0.36 m2/kpa, p=0.004); average DC (11.69±5.42 vs 18.61±11.87 1/kpa, p<0.001); average PWV (16.5±0.6 vs 12.5±3.7 m/s, p<0.001) and average IMT (0.78±0.13 vs 0.68±0.18 mm, p=0.001). Only the carotid PWV was found to be a predictor of vascular stroke (p=0.001)
Conclusion
Patients with vascular stroke have higher carotid stiffness indices than age matched control subjects. Measuring carotid stiffness indices in patients who have atherosclerotic risk factors may help predict those at risk of vascular stroke and thus guide a tighter and a more efficient risk factors control.
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Affiliation(s)
- G Youssef
- Cairo University Hospitals, CardioVascular Department, Cairo, Egypt
| | - D Mekkawy
- Cairo University Hospitals, Neurology Department, Cairo, Egypt
| | - N El-Fayoumy
- Cairo University Hospitals, Neurology Department, Cairo, Egypt
| | - A Abbas
- Cairo University Hospitals, Neurology Department, Cairo, Egypt
| | - M Allam
- Cairo University Hospitals, Neurology Department, Cairo, Egypt
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Willis J, Awogbade M, Howard J, Breen C, Abbas A, Harber M, Shendi M A, Andrews P, Galliford J, Shah S, Sharpe C. SUN-053 OUTCOMES FOLLOWING KIDNEY TRANSPLANTATION IN PATIENTS WITH SICKLE CELL DISEASE WITH AND WITHOUT EXCHANGE BLOOD TRANSFUSION. Kidney Int Rep 2019. [DOI: 10.1016/j.ekir.2019.05.449] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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Higgi S, Gavillet H, Abbas A, Rivett D, Green H, Daniels T, van der Gast C. P154 Investigation of the microbial community associated with Mycobacterium abscessus infection. J Cyst Fibros 2019. [DOI: 10.1016/s1569-1993(19)30448-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Briosa E Gala A, Dimarco A, Battison S, Shambrook J, Mahmoudi M, Abbas A. 77CT coronary angiography clinches the diagnosis in a patient with ST elevation following a suicide attempt. Eur Heart J Cardiovasc Imaging 2019. [DOI: 10.1093/ehjci/jez139.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- A Briosa E Gala
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - A Dimarco
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - S Battison
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - J Shambrook
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - M Mahmoudi
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
| | - A Abbas
- University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom of Great Britain & Northern Ireland
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Affiliation(s)
- L Sewell
- North Bristol NHS Trust, Bristol, UK
| | - A Abbas
- Queen Elizabeth Hospital, Birmingham, UK
| | - N Kane
- North Bristol NHS Trust, Bristol, UK
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Shahzad A, Abbas A, Nak D, Nak Y, Khan I, Mughal Z. 120 Evaluation of ovulation synchronization protocols and alternative pregnancy diagnosis tools in lactating dairy cows. J Anim Sci 2018. [DOI: 10.1093/jas/sky404.817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- A Shahzad
- University of Veterinary and Animal Sciences,Lahore, Jhang, Pakistan
| | - A Abbas
- UVAS,Lahore, Lahore, Pakistan
| | - D Nak
- Uludag University,Bursa, Turkey
| | - Y Nak
- Uludag University,Bursa, Turkey
| | - I Khan
- University of Veterinary and Animal Sciences,Lahore, Lahore, Pakistan
| | - Z Mughal
- University of Veterinary and Animal Sciences,Lahore, Lahore, Pakistan
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Abbas A, Etti R. Notalgia Paraesthetica. J R Coll Physicians Edinb 2018. [DOI: 10.4997/jrcpe.2018.412] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Affiliation(s)
- A Abbas
- ST6 in Clinical Neurophysiology, Department of Clinical Neurophysiology, Queen Elizabeth Hospital Birmingham, Birmingham, UK
| | - R Etti
- Consultant Neurologist, Department of Neurology, Queen Elizabeth Hospital Birmingham, Birmingham, UK
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Abdelbadee A, Abou-Taleb H, Abbas A, Ali S, Fakie N, Adams T, Gwyther L, Krause R. Road Map to Setting Up a Palliative Care Service in a Tertiary Center Gynecologic Oncology Unit in Egypt. J Glob Oncol 2018. [DOI: 10.1200/jgo.18.77000] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Background and context: Developing countries struggle with high cancer mortality and low resources. Cancer patients experience pain and physical symptoms in addition to psychological, social and spiritual worries that increase as the patients' conditions progress. Palliative care (PC) primary goal is to help people live as well as they can for the duration of their illness, with the finest physical and emotional well-being possible despite complex problems. However, there are considerable barriers to PC service implementation in developing countries. Aim: Our goal is to set up a PC service and integrate it as a standard of care for gynecologic cancer patients managed at Assiut University Hospitals, Egypt. The objective of this study is to investigate the tools needed to integrate a PC service in any oncology service in developing countries. Strategy/Tactics: A capacity building and local provision PC development framework was laid. Strategies included expanding the gynecologic oncology unit, assessment of PC knowledge among health providers and medical students, assembling a multidisciplinary PC team, overseas PC training, establishing international links, providing essential medicine and addressing PC education. Program/Policy process: The gynecologic oncology unit capacity was expanded to accommodate long term admissions. PC knowledge among physicians, clinical nurse practitioners (CNPs) and medical students in Assiut University Hospitals was assessed using the modified Palliative Care Knowledge Test (PCKT). A multidisciplinary team that will deliver the PC service to our gynecologic cancer patients was assembled based on motivation and individual expertise in the aspects of PC from relevant departments as clinical oncology, surgery, pain and anesthesiology, psychiatry, physical therapy and rehabilitation and nutrition. The hospital leadership worked with the pharmacists to increase opioids quota and facilitate dispensing measures. The PC team leader engaged in a certified online PC course and arranged overseas training with the reputable Palliative Medicine Division at University of Cape Town well known for its legacy in delivering PC education. Outcomes: Ninety two physicians, 14 CNPs and 116 medical students completed the PCKT. The PCKT was composed of 20 questions and each correct answer was given 1 point. The overall total correct score was 7.41 ± 2.48 (Fig 1). Poor knowledge about PC was a strong indicator to acknowledge the gap in PC postgraduate training and undergraduate education. What was learned: Integration of a PC service for cancer patients in Egypt is feasible in spite of local resources constraints. A PC multidisciplinary team can be assembled from skilled specialists. Modifications of undergraduate and postgraduate curricula to include PC is crucial. Our model can be transferred to other low resource settings. [Figure: see text]
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Affiliation(s)
- A. Abdelbadee
- Women's Health Hospital, Faculty of Medicine, Assiut University, Obstetrics and Gynecology Department, Assiut, Egypt
| | - H. Abou-Taleb
- Women's Health Hospital, Faculty of Medicine, Assiut University, Obstetrics and Gynecology Department, Assiut, Egypt
| | - A. Abbas
- Women's Health Hospital, Faculty of Medicine, Assiut University, Obstetrics and Gynecology Department, Assiut, Egypt
| | - S. Ali
- Women's Health Hospital, Faculty of Medicine, Assiut University, Obstetrics and Gynecology Department, Assiut, Egypt
| | - N. Fakie
- Faculty of Health Sciences, University of Cape Town, Radiation Oncology Department, Cape Town, South Africa
| | - T. Adams
- Faculty of Health Sciences, University of Cape Town, Gynecologic Oncology Division, Cape Town, South Africa
| | - L. Gwyther
- Faculty of Health Sciences, University of Cape Town, Palliative Medicine Division, Cape Town, South Africa
| | - R. Krause
- Faculty of Health Sciences, University of Cape Town, Palliative Medicine Division, Cape Town, South Africa
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Abbas A, Ali M, Farghaly T, Abdelmagied A. Induction of second trimester missed miscarriage using foley's catheter balloon with or without traction applied: a randomized controlled trial. Fertil Steril 2018. [DOI: 10.1016/j.fertnstert.2018.07.748] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Farghaly T, Abbas A, Badran E, Ali M. The impact of administration of in vitro fertilization medications at assisted reproduction center by nurses versus self-administration at home on patient satisfaction: a cohort study. Fertil Steril 2018. [DOI: 10.1016/j.fertnstert.2018.07.462] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Mahmoud O, Abbas A, Roshanlall C. Audit on Sentinel Node Positivity Following Diagnosis of Incidental Breast Cancer on Wide Local Excision for Ductal Carcinoma in Situ. Int J Surg 2017. [DOI: 10.1016/j.ijsu.2017.08.098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Abbas A, Ali M, Yosef A, Abdalmageed O, Shaaban O. Can the response to three months ibuprofen in controlling heavy menstrual bleeding with copper intrauterine device be predicted at baseline visit? Fertil Steril 2017. [DOI: 10.1016/j.fertnstert.2017.07.377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Abbas A, Shaaban O, Abdelkader A, Ali S, Nasr A, Khamis Y. Rectal ketoprofen is not an effective analgesic during hysterosalpingography. Fertil Steril 2017. [DOI: 10.1016/j.fertnstert.2017.07.780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Abbas A, Wagdy W, Ali S, Ali M, Abdalmageed O, Abdelkader A, Khamis Y, Shaaban O. Effect of oral diclofenac potassium plus cervical lidocaine cream on pain perception during hysterosalpingography. Fertil Steril 2017. [DOI: 10.1016/j.fertnstert.2017.07.061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Abbas A, Alzarga A, Abdelkader A, Khamis Y, Shaaban O, Ali S, Nasr A. A randomized controlled trial of oral diclofenac potassium for analgesic control during office hysteroscopy. Fertil Steril 2017. [DOI: 10.1016/j.fertnstert.2017.07.060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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