Comparative transcriptome analysis of grafting to improve chilling tolerance of cucumber

Grafting with pumpkin as rootstock could improve chilling tolerance of cucumber; however, the underlying mechanism of grafting-induced chilling tolerance remains unclear. Here, we analyzed the difference of physiological and transcriptional level between own-rooted (Cs/Cs) and hetero-grafted (Cs/Cm) cucumber seedlings under chilling stress. The results showed that grafting with pumpkin significantly alleviated the chilling injury as evidenced by slightly symptoms, lower contents of electrolyte leakage (EL), malondialdehyde (MDA), hydrogen peroxide (H2O2), and superoxide anion (O2-) and higher relative water content in Cs/Cm seedlings compared with Cs/Cs seedlings under chilling stress. RNA-seq data showed that grafting induced more DGEs at 8 °C/5 °C compared with 25 °C/18 °C. In accordance with the increase of the activities of antioxidant enzymes (SOD, POD, CAT, APX), grafting upregulated the expression of the regulated redox-related genes such as GST, SOD, and APX. Moreover, grafting increased the expression of genes participated in central carbon metabolism to promote the conversion and decomposition of sugar, which provided more energy for the growth of Cs/Cm seedlings under chilling stress. In addition, grafting regulated the genes involved in the intracellular signal transduction pathways such as calcium signal (CAML, CML, and CDPK) and inositol phospholipid signal (PLC), as well as changed the gene expression of plant hormone signal transduction pathways (ARF, GAI, ABF, and PYR/PYL). These results provide a physiological and transcriptional basis for the molecular mechanism of grafting-induced chilling tolerance of cucumber seedlings.

m6A demethylase ALKBH5 attenuates doxorubicin-induced cardiotoxicity via posttranscriptional stabilization of Rasal3

The clinical application of anthracyclines such as doxorubicin (DOX) is limited due to their cardiotoxicity. N6-methyladenosine (m⁶A) plays an essential role in numerous biological processes. However, the roles of m⁶A and m⁶A demethylase ALKBH5 in DOX-induced cardiotoxicity (DIC) remain unclear. In this research, DIC models were constructed using Alkbh5-knockout (KO), Alkbh5-knockin (KI), and Alkbh5-myocardial-specific knockout (ALKBH5^{flox/flox, αMyHC-Cre}) mice. Cardiac function and DOX-mediated signal transduction were investigated. As a result, both Alkbh5 whole-body KO and myocardial-specific KO mice had increased mortality, decreased cardiac function, and aggravated DIC injury with severe myocardial mitochondrial damage. Conversely, ALKBH5 overexpression alleviated DOX-mediated mitochondrial injury, increased survival, and improved myocardial function. Mechanistically, ALKBH5 regulated the expression of Rasal3 in an m⁶A-dependent manner through posttranscriptional mRNA regulation and reduced Rasal3 mRNA stability, thus activating RAS3, inhibiting apoptosis through the RAS/RAF/ERK signaling pathway, and alleviating DIC injury. These findings indicate the potential therapeutic effect of ALKBH5 on DIC.

The covalent NLRP3-inflammasome inhibitor Oridonin relieves myocardial infarction induced myocardial fibrosis and cardiac remodeling in mice

BACKGROUND

Myocardial infarction (MI) triggers a strong inflammatory response that is associated with myocardial fibrosis and cardiac remodeling. Interleukin (IL)-1β and IL-18 are key players in this response and are controlled by NLRP3-inflammatory bodies. Oridonin is a newly reported NLRP3 inhibitor with strong anti-inflammatory activity. We hypothesized that the covalent NLRP3 inhibitor Oridonin could reduce IL-1β and IL-18 expression and ameliorate myocardial fibrosis after myocardial infarction in mice, improve poor heart remodeling, and preserve heart function.

METHODS

Male C57BL/6 mice were subjected to left coronary artery ligation to induce MI and then treated with Oridonin (1, 3, or 6 mg/kg), MCC950 (10 mg/kg), CY-09 (5 mg/kg) or saline three times a week for two weeks. Four weeks after MI, cardiac function and myocardial fibrosis were assessed. In addition, myocardial expressions of inflammatory factors and fibrotic markers were analyzed by western blot, immunofluorescence, enzyme-linked immunosorbent assay, and quantitative real-time polymerase chain reaction.

RESULTS

Oridonin treatment preserved left ventricular ejection fraction and fractional shortening, and markedly limited the myocardial infarct size in treated mice. The myocardial fibrosis was lower in the 1 mg/kg group (15.98 ± 1.64)%, 3 mg/kg group (17.39 ± 2.45)%, and 6 mg/kg group (16.76 ± 3.06)% compared to the control group (23.38 ± 1.65)%. Moreover, similar with the results of Oridonin, MCC950 and CY-09 also preserved cardiac function and reduced myocardial fibrosis. The expression levels of NLRP3, IL-1β and IL-18 were decreased in the Oridonin treatment group compared to non-treated group. In addition, myocardial macrophage and neutrophil influxes were attenuated in the Oridonin treated group.

CONCLUSIONS

The covalent NLRP3-inflammasome inhibitor Oridonin reduces myocardial fibrosis and preserves cardiac function in a mouse MI model, which indicates potential therapeutic effect of Oridonin on acute MI patients.

[Primary thyroid paraganglioma: a case report]

Primary thyroid paraganglioma (PTPG) is rare,we report a case of 55 years old women with PTPG, which describes the clinical features, diagnosis and treatment. A possible diagnosis, treatment and follow-up strategy was proposed by reviewing relevant reports. It aims to improve the cognitive of PTPG and standardize its treatment.

[Construction of chemical information database based on optical structure recognition technique]

OBJECTIVE

To create a protocol that could be used to construct chemical information database from scientific literature quickly and automatically.

METHODS

Scientific literature, patents and technical reports from different chemical disciplines were collected and stored in PDF format as fundamental datasets. Chemical structures were transformed from published documents and images to machine-readable data by using the name conversion technology and optical structure recognition tool CLiDE. In the process of molecular structure information extraction, Markush structures were enumerated into well-defined monomer molecules by means of QueryTools in molecule editor ChemDraw. Document management software EndNote X8 was applied to acquire bibliographical references involving title, author, journal and year of publication. Text mining toolkit ChemDataExtractor was adopted to retrieve information that could be used to populate structured chemical database from figures, tables, and textual paragraphs. After this step, detailed manual revision and annotation were conducted in order to ensure the accuracy and completeness of the data. In addition to the literature data, computing simulation platform Pipeline Pilot 7.5 was utilized to calculate the physical and chemical properties and predict molecular attributes. Furthermore, open database ChEMBL was linked to fetch known bioactivities, such as indications and targets. After information extraction and data expansion, five separate metadata files were generated, including molecular structure data file, molecular information, bibliographical references, predictable attributes and known bioactivities. Canonical simplified molecular input line entry specification as primary key, metadata files were associated through common key nodes including molecular number and PDF number to construct an integrated chemical information database.

RESULTS

A reasonable construction protocol of chemical information database was created successfully. A total of 174 research articles and 25 reviews published in Marine Drugs from January 2015 to June 2016 collected as essential data source, and an elementary marine natural product database named PKU-MNPD was built in accordance with this protocol, which contained 3 262 molecules and 19 821 records.

CONCLUSION

This data aggregation protocol is of great help for the chemical information database construction in accuracy, comprehensiveness and efficiency based on original documents. The structured chemical information database can facilitate the access to medical intelligence and accelerate the transformation of scientific research achievements.

Efficacy of triple therapy with Sandostatin, Dahuang Fuzi Decoction and XiNeng in the treatment of postoperative acute adhesive intestinal obstruction: an analysis of 45 cases

AIM: To evaluate the efficacy of triple therapy with octreotide acetate (Sandostatin), Dahuang Fuzi Decoction and N(2)-L-alanyl-L-glutamine (XiNeng) in the treatment of postoperative acute adhesive intestinal obstruction.

METHODS: This was a prospective, single-center, randomized controlled clinical trial. Eighty-five patients with postoperative acute adhesive intestinal obstruction who were treated at the Affiliated Zhongshan Hospital of Dalian University from May 2009 to January 2011 were randomly divided into control group (n = 40) and treatment group (n = 45). The control group received conventional treatment, including fasting, gastrointestinal decompression, soapy water enema, rehydration and anti-infection, while the treatment group received triple therapy on the basis of conventional therapy. Both the two groups were treated until the obstruction relieved. Clinical manifestations, the clinical curative effect, the number of cases of conversion to surgery, and the length of hospital stay were compared between the two groups.

RESULTS: Compared to the control group, the treatment group had a shorter time to first anal exhaust (70.7 ± 10.4 h vs 45.3 ± 9.8 h, P < 0.05), time to first defecation (112.4 ± 16.8 h vs 70.5 ± 12.7 h, P < 0.05), stomach tube retention time (135.8 ± 26.7 h vs 91.5 ± 14.1 h, P < 0.05), eating recovery time (158.8 ± 26.4 h vs 109.4 ± 15.7 h, P <0.05), and length of hospital stay (13.9 ± 3.4 d vs 8.2 ± 2.6 d, P < 0.05). In the control group, 19 cases were cured, 13 cases were improved, and 8 cases showed no improvement. In the treatment group, the corresponding figures were 31, 11 and 3, respectively. The total response rate was 93.3% for the treatment group and 80.0% for the control group. The number of cases of conversion to surgery was significantly fewer in the treatment group than in the control group (3 vs 8, P < 0.05).

CONCLUSION: Triple therapy with Sandostatin, Dahuang Fuzi Decoction and XiNeng could significantly improve clinical symptoms, promote the recovery of bowel function, reduce the rate of conversion to surgery, and shorten hospital stay in patients with postoperative acute adhesive intestinal obstruction.