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Zhao X, Joshi JJ, Aird D, Karr C, Yu K, Huang C, Colombo F, Virrankoski M, Prajapati S, Selvaraj A. Combined inhibition of FGFR4 and VEGFR signaling enhances efficacy in FGF19 driven hepatocellular carcinoma. Am J Cancer Res 2022;12:2733-2743. [PMID: 35812049 PMCID: PMC9251677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Accepted: 04/07/2022] [Indexed: 06/15/2023]  Open
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Fenoglio S, Cristo AM, Tepper J, Teng T, Meier SR, Choi A, Zhang H, Zhao SC, Liu S, Ahronian LG, Aird D, Das NM, Yu Y, Sjin RTT, Andersen JN, Huang A, Li F, Pan X. Abstract P183: CRISPR screens identify sensitizers to trametinib in KRAS mutant cancer cell lines. Mol Cancer Ther 2021. [DOI: 10.1158/1535-7163.targ-21-p183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Ahronian LG, Fenoglio S, Das N, Aird D, Guerin D, Whittington D, Jahic H, Brophy E, McCarren P, McMillan B, Tepper J, Mentzer M, Li F, Zhang H, Pan X, Maxwell J, Andersen J, Huang A, Sjin RTT. Abstract P146: Loss of HS2ST1 cooperates with MAPK inhibition to impair growth of mesenchymal KRAS mutant NSCLC. Mol Cancer Ther 2021. [DOI: 10.1158/1535-7163.targ-21-p146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Aird D, Teng T, Huang CL, Pazolli E, Banka D, Cheung-Ong K, Eifert C, Furman C, Wu J, Seiler M, Buonamici S, Fekkes P, Karr C, Palacino J, Park E, Smith P, Yu L, Mizui Y, Warmuth M, Chicas A, Corson L, Zhu P. Abstract 281: Sensitivity to splicing modulation of BCL2 family genes reveals cancer therapeutic strategies for splicing modulators. Cancer Res 2019. [DOI: 10.1158/1538-7445.am2019-281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Teng T, Tsai J, Puyang X, Seiler M, Peng S, Aird D, Buonamici S, Caleb B, Chan B, Corson L, Feala J, Fekkes P, Karr C, Korpal M, Mizui Y, Park E, Palacino J, Smith P, Subramanian V, Wu J, Yu L, Chicas A, Warmuth M, Larsen N, Zhu P. Abstract 126: A chemogenomic approach reveals the action of splicing modulators at the branch point adenosine binding pocket defined by the PHF5A/SF3b complex. Cancer Res 2017. [DOI: 10.1158/1538-7445.am2017-126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Aird D, Pazolli E, Furman C, Lee L, Kunii K, Park ES, Karr C, Chan B, Aicher M, Buonamici S, Wang JY, Feala J, Yu L, Warmuth M, Smith P, Fekkes P, Zhu P, Gerard B, Mizui Y, Corson L. Abstract C8: Targeting MCL1-dependent cancers with SF3B splicing modulators. Mol Cancer Ther 2015. [DOI: 10.1158/1535-7163.targ-15-c8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Darman R, Seiler M, Agrawal A, Lim K, Peng S, Aird D, Bailey S, Bhavsar E, Chan B, Colla S, Corson L, Feala J, Fekkes P, Ichikawa K, Keaney G, Lee L, Kumar P, Kunii K, MacKenzie C, Matijevic M, Mizui Y, Myint K, Park E, Puyang X, Selvaraj A, Thomas M, Tsai J, Wang J, Warmuth M, Yang H, Zhu P, Garcia-Manero G, Furman R, Yu L, Smith P, Buonamici S. Cancer-Associated SF3B1 Hotspot Mutations Induce Cryptic 3′ Splice Site Selection through Use of a Different Branch Point. Cell Rep 2015;13:1033-45. [DOI: 10.1016/j.celrep.2015.09.053] [Citation(s) in RCA: 247] [Impact Index Per Article: 27.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2015] [Revised: 08/21/2015] [Accepted: 09/18/2015] [Indexed: 10/22/2022]  Open
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Park ES, Aicher M, Aird D, Buonamici S, Chan B, Eifert C, Fekkes P, Furman C, Gerard B, Karr C, Keaney G, Kunii K, Lee L, Pazolli E, Prajapati S, Satoh T, Smith P, Wang JY, Wang K, Warmuth M, Yu L, Zhu P, Mizui Y, Corson LB. Abstract 2941: Targeting MCL1-dependent cancers through RNA splicing modulation. Cancer Res 2015. [DOI: 10.1158/1538-7445.am2015-2941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Buonamici S, Lim KH, Feala J, Park E, Corson L, Aicher M, Aird D, Chan B, Corcoran E, Darman R, Fekkes P, Keaney G, Kumar P, Kunii K, Lee L, Puyang X, Rodrigues J, Selvaraj A, Thomas M, Wang J, Warmuth M, Yu L, Zhu P, Smith P, Mizui Y. Abstract 2932: SF3B1 mutations induce aberrant mRNA splicing in cancer and confer sensitivity to spliceosome inhibition. Cancer Res 2014. [DOI: 10.1158/1538-7445.am2014-2932] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Rakestraw JA, Aird D, Aha PM, Baynes BM, Lipovsek D. Secretion-and-capture cell-surface display for selection of target-binding proteins. Protein Eng Des Sel 2011;24:525-30. [DOI: 10.1093/protein/gzr008] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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Aird D, Ross MG, Chen WS, Danielsson M, Fennell T, Russ C, Jaffe DB, Nusbaum C, Gnirke A. Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries. Genome Biol 2011;12:R18. [PMID: 21338519 PMCID: PMC3188800 DOI: 10.1186/gb-2011-12-2-r18] [Citation(s) in RCA: 735] [Impact Index Per Article: 56.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2010] [Revised: 12/23/2010] [Accepted: 02/21/2011] [Indexed: 01/18/2023]  Open
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Aird D, Ross MG, Chen WS, Danielsson M, Fennell T, Russ C, Jaffe DB, Nusbaum C, Gnirke A. Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries. Genome Biol 2011. [PMID: 21338519 DOI: 10.1186/1465-6906-12-s1-i18] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]  Open
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Aird D, Chen WS, Ross M, Connolly K, Meldrim J, Russ C, Fisher S, Jaffe D, Nusbaum C, Gnirke A. Analyzing and minimizing bias in Illumina sequencing libraries. Genome Biol 2010. [PMCID: PMC3026259 DOI: 10.1186/gb-2010-11-s1-p3] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]  Open
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Sui J, Hwang WC, Perez S, Wei G, Aird D, Chen LM, Santelli E, Stec B, Cadwell G, Ali M, Wan H, Murakami A, Yammanuru A, Han T, Cox NJ, Bankston LA, Donis RO, Liddington RC, Marasco WA. Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses. Nat Struct Mol Biol 2009;16:265-73. [PMID: 19234466 PMCID: PMC2692245 DOI: 10.1038/nsmb.1566] [Citation(s) in RCA: 947] [Impact Index Per Article: 63.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2008] [Accepted: 01/22/2009] [Indexed: 02/03/2023]
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Taube R, Zhu Q, Xu C, Diaz-Griffero F, Sui J, Kamau E, Dwyer M, Aird D, Marasco WA. Lentivirus display: stable expression of human antibodies on the surface of human cells and virus particles. PLoS One 2008;3:e3181. [PMID: 18784843 PMCID: PMC2527531 DOI: 10.1371/journal.pone.0003181] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2008] [Accepted: 08/11/2008] [Indexed: 01/12/2023]  Open
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