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Münch A, Teichmann D, Kuzman P, Spille D, Perez E, May S, Mueller W, Kombos T, Nazari-Dehkordi S, Onken J, Vajkoczy P, Ntoulias G, Paulus W, Heppner F, Koch A, Capper D, Kaul D, Thomas C, Schweizer L. P05.05.B A new IDH-wildtype glioma subtype characterized by highly diffuse growth pattern, distinct epigenetic profile and relatively favorable prognosis. Neuro Oncol 2022. [DOI: 10.1093/neuonc/noac174.124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Background
DNA methylation profiling has emerges as a powerful approach to CNS tumor classification and the discovery of novel, molecularly distinct entities. With the release of the 12.5 version of the Heidelberg Brain Tumor Classifier, some unclassifiable cases can be assigned to novel methylation classes. We retrospectively reviewed our databases and identified 16 previously unclassifiable cases, all of which belong to the provisional methylation class “adult-type diffuse high-grade glioma, IDH-wildtype, subtype F (HGG_F)”.
Material and Methods
We clinically, radiologically and morphologically characterized 16 HGG_F cases and compared them to 347 glioblastomas. We additionally analyzed copy-number alterations and performed DNA exome sequencing.
Results
Median age at diagnosis of the 12 males and 4 females was 65 years. Upon initial diagnostic workup, specimens were classified as CNS tissue with reactive changes (n=3) or suspicious for the infiltration zone of a diffuse glioma (n = 13). None of the cases demonstrated endothelial proliferation or necrosis and 10/16 tumors had flat copy number profiles. Radiological characteristics were reminiscent of gliomatosis cerebri in eight cases and 9/9 cases had normal FET-PET scans. Whole-exome sequencing revealed genetic alterations frequently found in IDH-wildtype glioblastomas, including TERT promoter mutations in 11/14 (78.6%) and PIK3 mutations (10/14, 71.4%). Outcome was significantly better compared to TCGA IDH-wildtype glioblastomas with a median progression-free survival of 58 months and overall survival of 73 months (both p<0.001).
Conclusion
We provide evidence that TERT promoter mutations in diffusely infiltrating gliomas without further morphological or molecular signs of high-grade glioma should be interpreted in the context of the clinico-radiological presentation as well as epigenetic prolife and may not be suitable as standalone diagnostic marker for glioblastoma, IDH wildtype.
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Affiliation(s)
- A Münch
- Charité - Universitätsmedizin Berlin, Department of Neuropathology , Berlin , Germany
| | - D Teichmann
- Charité - Universitätsmedizin Berlin, Department of Neuropathology , Berlin , Germany
| | - P Kuzman
- Institute of Neuropathology, University Hospital Leipzig , Leipzig , Germany
| | - D Spille
- Department of Neurosurgery, University Hospital Münster , Münster , Germany
| | - E Perez
- Charité - Universitätsmedizin Berlin, Department of Neuropathology , Berlin , Germany
| | - S May
- Klinikum Chemnitz, Department of Neurosurgery , Chemnitz , Germany
| | - W Mueller
- Institute of Neuropathology, University Hospital Leipzig , Leipzig , Germany
| | - T Kombos
- Schlosspark-Klinik Charlottenburg, Department of Neurosurgery , Berlin , Germany
| | - S Nazari-Dehkordi
- Schlosspark-Klinik Charlottenburg, Department of Neurosurgery , Berlin , Germany
| | - J Onken
- Charité - Universitätsmedizin Berlin, Department of Neurosurgery , Berlin , Germany
| | - P Vajkoczy
- Charité - Universitätsmedizin Berlin, Department of Neurosurgery , Berlin , Germany
| | - G Ntoulias
- Vivantes Klinikum Neukölln, Department of Neurosurgery , Berlin , Germany
| | - W Paulus
- Institute of Neuropathology, University Hospital Münster , Münster , Germany
| | - F Heppner
- Charité - Universitätsmedizin Berlin, Department of Neuropathology , Berlin , Germany
| | - A Koch
- Charité - Universitätsmedizin Berlin, Department of Neuropathology , Berlin , Germany
| | - D Capper
- Charité - Universitätsmedizin Berlin, Department of Neuropathology , Berlin , Germany
| | - D Kaul
- Charité - Universitätsmedizin Berlin, Department of Radiation Oncology and Radiotherapy , Berlin , Germany
| | - C Thomas
- Institute of Neuropathology, University Hospital Münster , Münster , Germany
| | - L Schweizer
- Charité - Universitätsmedizin Berlin, Department of Neuropathology , Berlin , Germany
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Fontanella C, Gehlhaar C, Denkert C, Schneeweiss A, Heppner BI, Koch I, Blohmer JU, Jackisch C, Lederer B, Fasching PA, Müller V, Untch M, Aprile G, Puglisi F, Nekljudova V, Heppner F, von Minckwitz G, Loibl S. Abstract P3-07-55: Predictive value of O6-methylguanine-DNA methyltransferase (MGMT) promoter gene methylation in triple-negative breast cancer patients receiving carboplatin. Cancer Res 2016. [DOI: 10.1158/1538-7445.sabcs15-p3-07-55] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Background: The epigenetic profile of triple-negative breast cancer (TNBC) showed a wide prevalence of MGMT promoter methylation.Aberrant methylation of MGMT seems to be an independent predictor of poor survival in patients with basal-like breast cancer. Moreover, patients with MGMT-negative basal-like tumors who received cyclophosphamide had asignificantly improved DFS and OS compared with MGMT-positive tumors.However, the impact of MGMT methylation in the context of modern therapy concepts is not clear.
Methods: We retrospectively evaluated 174 TNBC tumors of patients enrolled into the neoadjuvantGeparSixtotrial from 08/2011 to 12/2012. Patients were randomized to receive 18 weeks of neoadjuvant treatment with paclitaxel (80mg/m2/week) and non-pegylated liposomal doxorubicin (20mg/m2/week) with or without addition of carboplatin (AUC 2.0-1.5/week).Hormone-receptor status, HER2status, and Ki67 were centrally confirmed prior to randomization. We defined pathological complete response (pCR)as ypT0/is ypN0. MGMT promoter methylation status was determined by PCR using EZ DNA Methylation Kit™ (Zymo Research); TNBCtumors were considered to be methylated if they had an average methylation ≥10%, some tumors were considered borderline due to high heterogeneity among GpC islands.We investigated the effect of MGMT methylation on pCR and its correlation with baseline characteristics.
Results: A total of210 tumors from the TNBC cohort of the GeparSixtotrial(n=315) were available with a tumor content >20%. In 174 tumors the methylation assay was performed successfully. The number of tumorswith methylated MGMT was similar in carboplatin vs. non-carboplatin treated cohorts. In the carboplatin group 19.3% (17/88) of TNBC were methylated, 65.5% (58/88)unmethylated, and 14.8% (13/88) borderline.In the non-carboplatin group 20.9% (18/86) of TNBC were methylated, 62.8% (54/86)unmethylated, and 16.3% (14/86) borderline.In the entire cohort,there was no association between MGMT methylation status and pCR (p=0.522).Non-carboplatin cohort: 33.3% (6/18) of patients with methylated MGMT achieved pCR vs. 51.9% (28/54) of unmethylatedand 21.4% (3/14) of borderline (p=0.079).Carboplatin cohort: 52.9% (9/17) of patients with methylated MGMT achieved pCR vs. 55.2% (32/58) of unmethylatedand 76.9% (10/13) of borderline (p=0.320). In TNBC patients with methylated MGMT, the addition of carboplatin resulted in a 20% increased pCR rate (p=0.241).
Conclusion: In this study no statistically significant association between MGMT methylation andpCR was found.Patients with MGMT methylation seemed to have a lower possibility to achieve a pCR and the addition of carboplatin seemed to reverse this effect. However, a clear classification of the borderline MGMT samples and further studies in larger series of TNBC are warranted.
Citation Format: Fontanella C, Gehlhaar C, Denkert C, Schneeweiss A, Heppner B-I, Koch I, Blohmer J-U, Jackisch C, Lederer B, Fasching PA, Müller V, Untch M, Aprile G, Puglisi F, Nekljudova V, Heppner F, von Minckwitz G, Loibl S. Predictive value of O6-methylguanine-DNA methyltransferase (MGMT) promoter gene methylation in triple-negative breast cancer patients receiving carboplatin. [abstract]. In: Proceedings of the Thirty-Eighth Annual CTRC-AACR San Antonio Breast Cancer Symposium: 2015 Dec 8-12; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2016;76(4 Suppl):Abstract nr P3-07-55.
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Affiliation(s)
- C Fontanella
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - C Gehlhaar
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - C Denkert
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - A Schneeweiss
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - B-I Heppner
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - I Koch
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - J-U Blohmer
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - C Jackisch
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - B Lederer
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - PA Fasching
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - V Müller
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - M Untch
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - G Aprile
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - F Puglisi
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - V Nekljudova
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - F Heppner
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - G von Minckwitz
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
| | - S Loibl
- German Breast Group, Neu-Isenburg, Germany; Univeristy Hospital of Udine, Udine, Italy; Charité University of Berlin, Berlin, Germany; University Hospital Heidelberg, Heidelberg, Germany; Sana Klinikum Offenbach, Offenbach, Germany; University Hospital Erlangen, Erlangen, Germany; University Hospital Hamburg-Eppendorf, Hamburg, Germany; Helios Klinikum Berlin-Buch, Berlin, Germany; Charité Universtitätsmedizin Berlin, Berlin, Germany
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