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Sayers CJ, Evers DC, Ruiz-Gutierrez V, Adams E, Vega CM, Pisconte JN, Tejeda V, Regan K, Lane OP, Ash AA, Cal R, Reneau S, Martínez W, Welch G, Hartwell K, Teul M, Tzul D, Arendt WJ, Tórrez MA, Watsa M, Erkenswick G, Moore CE, Gerson J, Sánchez V, Purizaca RP, Yurek H, Burton MEH, Shrum PL, Tabares-Segovia S, Vargas K, Fogarty FF, Charette MR, Martínez AE, Bernhardt ES, Taylor RJ, Tear TH, Fernandez LE. Mercury in Neotropical birds: a synthesis and prospectus on 13 years of exposure data. Ecotoxicology 2023; 32:1096-1123. [PMID: 37907784 PMCID: PMC10622370 DOI: 10.1007/s10646-023-02706-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 10/09/2023] [Indexed: 11/02/2023]
Abstract
Environmental mercury (Hg) contamination of the global tropics outpaces our understanding of its consequences for biodiversity. Knowledge gaps of pollution exposure could obscure conservation threats in the Neotropics: a region that supports over half of the world's species, but faces ongoing land-use change and Hg emission via artisanal and small-scale gold mining (ASGM). Due to their global distribution and sensitivity to pollution, birds provide a valuable opportunity as bioindicators to assess how accelerating Hg emissions impact an ecosystem's ability to support biodiversity, and ultimately, global health. We present the largest database on Neotropical bird Hg concentrations (n = 2316) and establish exposure baselines for 322 bird species spanning nine countries across Central America, South America, and the West Indies. Patterns of avian Hg exposure in the Neotropics broadly align with those in temperate regions: consistent bioaccumulation across functional groups and high spatiotemporal variation. Bird species occupying higher trophic positions and aquatic habitats exhibited elevated Hg concentrations that have been previously associated with reductions in reproductive success. Notably, bird Hg concentrations were over four times higher at sites impacted by ASGM activities and differed by season for certain trophic niches. We developed this synthesis via a collaborative research network, the Tropical Research for Avian Conservation and Ecotoxicology (TRACE) Initiative, which exemplifies inclusive, equitable, and international data-sharing. While our findings signal an urgent need to assess sampling biases, mechanisms, and consequences of Hg exposure to tropical avian communities, the TRACE Initiative provides a meaningful framework to achieve such goals. Ultimately, our collective efforts support and inform local, scientific, and government entities, including Parties of the United Nations Minamata Convention on Mercury, as we continue working together to understand how Hg pollution impacts biodiversity conservation, ecosystem function, and public health in the tropics.
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Affiliation(s)
- Christopher J Sayers
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, 90095, USA.
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA.
- Centro de Innovación Científica Amazónica, Puerto Maldonado, Madre de Dios, 17000, Peru.
| | - David C Evers
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | | | - Evan Adams
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | - Claudia M Vega
- Centro de Innovación Científica Amazónica, Puerto Maldonado, Madre de Dios, 17000, Peru
- Department of Biology, Center for Energy, Environment and Sustainability, Wake Forest University, Winston-Salem, NC, 27106, USA
| | - Jessica N Pisconte
- Centro de Innovación Científica Amazónica, Puerto Maldonado, Madre de Dios, 17000, Peru
| | - Vania Tejeda
- Centro de Innovación Científica Amazónica, Puerto Maldonado, Madre de Dios, 17000, Peru
| | - Kevin Regan
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | - Oksana P Lane
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | - Abidas A Ash
- Environmental Research Institute, University of Belize, Price Center Road, P.O. Box 340, Belmopan, Cayo District, Belize
| | - Reynold Cal
- Foundation for Wildlife Conservation, Tropical Education Center, 28 George Price Highway, P.O. Box 368, La Democracia, Belize District, Belize
| | - Stevan Reneau
- Foundation for Wildlife Conservation, Tropical Education Center, 28 George Price Highway, P.O. Box 368, La Democracia, Belize District, Belize
| | - Wilber Martínez
- Foundation for Wildlife Conservation, Tropical Education Center, 28 George Price Highway, P.O. Box 368, La Democracia, Belize District, Belize
| | - Gilroy Welch
- Foundation for Wildlife Conservation, Tropical Education Center, 28 George Price Highway, P.O. Box 368, La Democracia, Belize District, Belize
| | - Kayla Hartwell
- Foundation for Wildlife Conservation, Tropical Education Center, 28 George Price Highway, P.O. Box 368, La Democracia, Belize District, Belize
| | - Mario Teul
- Foundation for Wildlife Conservation, Tropical Education Center, 28 George Price Highway, P.O. Box 368, La Democracia, Belize District, Belize
| | - David Tzul
- Foundation for Wildlife Conservation, Tropical Education Center, 28 George Price Highway, P.O. Box 368, La Democracia, Belize District, Belize
| | - Wayne J Arendt
- International Institute of Tropical Forestry, USDA Forest Service, 1201 Calle Ceiba, Jardín Botánico Sur, San Juan, 00926-1119, Puerto Rico
| | - Marvin A Tórrez
- Instituto Interdisciplinario de Ciencias Naturales, Universidad Centroamericana, Managua, Nicaragua
| | - Mrinalini Watsa
- Beckman Center for Conservation Research, San Diego Zoo Wildlife Alliance, P.O. Box 120551, San Diego, CA, 92112, USA
- Field Projects International, Escondido, CA, 92029, USA
| | | | - Caroline E Moore
- Beckman Center for Conservation Research, San Diego Zoo Wildlife Alliance, P.O. Box 120551, San Diego, CA, 92112, USA
| | - Jacqueline Gerson
- Department of Earth & Environmental Sciences, Michigan State University, East Lansing, MI, 48824, USA
| | - Victor Sánchez
- Instituto de Investigación en Ecología y Conservación, Trujillo, Peru
| | - Raúl Pérez Purizaca
- Universidad Nacional de Piura, Urb. Miraflores S/N, Castilla, 20002, Piura, Peru
| | - Helen Yurek
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | - Mark E H Burton
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | - Peggy L Shrum
- Department of Fisheries and Wildlife Biology, Clemson University, Clemson, SC, 29634, USA
| | | | - Korik Vargas
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | - Finola F Fogarty
- Department of Zoology, Faculty of Science, University of British Columbia, Vancouver, BC, Canada
- Toucan Ridge Ecology and Education Society, 27.5 Miles Hummingbird Hwy, Stann Creek, Belize
| | - Mathieu R Charette
- Toucan Ridge Ecology and Education Society, 27.5 Miles Hummingbird Hwy, Stann Creek, Belize
| | - Ari E Martínez
- Department of Ecology & Evolutionary Biology, University of California, Santa Cruz, CA, 95064, USA
| | | | - Robert J Taylor
- Department of Veterinary Medicine & Biomedical Sciences, Texas A&M University, College Station, TX, 77843, USA
| | - Timothy H Tear
- Center for Mercury Studies, Biodiversity Research Institute, 276 Canco Road, Portland, ME, 04103, USA
| | - Luis E Fernandez
- Centro de Innovación Científica Amazónica, Puerto Maldonado, Madre de Dios, 17000, Peru
- Department of Biology, Center for Energy, Environment and Sustainability, Wake Forest University, Winston-Salem, NC, 27106, USA
- Department of Global Ecology, Carnegie Institution for Science, Stanford, CA, 94305, USA
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2
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Urban L, Perlas A, Francino O, Martí‐Carreras J, Muga BA, Mwangi JW, Boykin Okalebo L, Stanton JL, Black A, Waipara N, Fontsere C, Eccles D, Urel H, Reska T, Morales HE, Palmada‐Flores M, Marques‐Bonet T, Watsa M, Libke Z, Erkenswick G, van Oosterhout C. Real-time genomics for One Health. Mol Syst Biol 2023; 19:e11686. [PMID: 37325891 PMCID: PMC10407731 DOI: 10.15252/msb.202311686] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 05/31/2023] [Accepted: 06/02/2023] [Indexed: 06/17/2023] Open
Abstract
The ongoing degradation of natural systems and other environmental changes has put our society at a crossroad with respect to our future relationship with our planet. While the concept of One Health describes how human health is inextricably linked with environmental health, many of these complex interdependencies are still not well-understood. Here, we describe how the advent of real-time genomic analyses can benefit One Health and how it can enable timely, in-depth ecosystem health assessments. We introduce nanopore sequencing as the only disruptive technology that currently allows for real-time genomic analyses and that is already being used worldwide to improve the accessibility and versatility of genomic sequencing. We showcase real-time genomic studies on zoonotic disease, food security, environmental microbiome, emerging pathogens, and their antimicrobial resistances, and on environmental health itself - from genomic resource creation for wildlife conservation to the monitoring of biodiversity, invasive species, and wildlife trafficking. We stress why equitable access to real-time genomics in the context of One Health will be paramount and discuss related practical, legal, and ethical limitations.
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Affiliation(s)
- Lara Urban
- Helmholtz AI, Helmholtz Zentrum MuenchenNeuherbergGermany
- Helmholtz Pioneer Campus, Helmholtz Zentrum MuenchenNeuherbergGermany
- School of Life Sciences, Technical University of MunichFreisingGermany
| | - Albert Perlas
- Helmholtz AI, Helmholtz Zentrum MuenchenNeuherbergGermany
- Helmholtz Pioneer Campus, Helmholtz Zentrum MuenchenNeuherbergGermany
| | - Olga Francino
- Nano1Health SL, Parc de Recerca UABCampus Universitat Autònoma de BarcelonaBarcelonaSpain
| | - Joan Martí‐Carreras
- Nano1Health SL, Parc de Recerca UABCampus Universitat Autònoma de BarcelonaBarcelonaSpain
| | - Brenda A Muga
- Department of AnatomyUniversity of OtagoDunedinNew Zealand
| | | | | | | | - Amanda Black
- Bioprotection AotearoaLincoln UniversityLincolnNew Zealand
| | | | - Claudia Fontsere
- Center for Evolutionary HologenomicsThe Globe Institute, University of CopenhagenCopenhagenDenmark
| | - David Eccles
- Hugh Green Cytometry CentreMalaghan Institute of Medical ResearchWellingtonNew Zealand
| | - Harika Urel
- Helmholtz AI, Helmholtz Zentrum MuenchenNeuherbergGermany
- Helmholtz Pioneer Campus, Helmholtz Zentrum MuenchenNeuherbergGermany
- School of Life Sciences, Technical University of MunichFreisingGermany
| | - Tim Reska
- Helmholtz AI, Helmholtz Zentrum MuenchenNeuherbergGermany
- Helmholtz Pioneer Campus, Helmholtz Zentrum MuenchenNeuherbergGermany
- School of Life Sciences, Technical University of MunichFreisingGermany
| | - Hernán E Morales
- Center for Evolutionary HologenomicsThe Globe Institute, University of CopenhagenCopenhagenDenmark
- Department of Biology, Ecology BuildingLund UniversityLundSweden
| | - Marc Palmada‐Flores
- Institute of Evolutionary BiologyUniversitat Pompeu Fabra‐CSIC, PRBBBarcelonaSpain
| | - Tomas Marques‐Bonet
- Institute of Evolutionary BiologyUniversitat Pompeu Fabra‐CSIC, PRBBBarcelonaSpain
- Catalan Institution of Research and Advanced Studies (ICREA)BarcelonaSpain
- CNAGCentre of Genomic AnalysisBarcelonaSpain
- Institut Català de Paleontologia Miquel CrusafontUniversitat Autònoma de BarcelonaBarcelonaSpain
| | | | - Zane Libke
- Instituto Nacional de BiodiversidadQuitoEcuador
- Fundación Sumak Kawsay In SituCantón MeraEcuador
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3
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Moreira LAA, Watsa M, Erkenswick G, Higham JP, Melin AD. Evaluating genital skin color as a putative sexual signal in wild saddleback (Leontocebus weddelli) and emperor (Saguinus imperator) tamarins. Am J Primatol 2023; 85:e23456. [PMID: 36437549 DOI: 10.1002/ajp.23456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 11/14/2022] [Accepted: 11/17/2022] [Indexed: 11/29/2022]
Abstract
Coevolution between signalers and receivers has played a significant role in the diversity of animal signals and sensory systems. Platyrrhines (monkeys in the Americas) exhibit a remarkable color vision polymorphism that may have been selected by both natural and sexual selection, but sociosexual color signaling among platyrrhines has received almost no attention. Here, we study the color of reproductive skin among different reproductive classes in free-ranging female saddleback (Leontocebus weddelli) and emperor (Saguinus imperator) tamarins, modeling color spaces, and contrasts for the different visual systems. We find that the chromatic saturation and luminance of genital color vary between reproductive classes in saddleback tamarins. Chromatic contrast between the vulva and belly is lower in the parous females (PFs) relative to adult but not currently breeding females, while achromatic contrast is higher in PFs in saddleback tamarins relative to nonparous females. However, in emperor tamarins, genital color (saturation, hue, and luminance) does not vary between reproductive classes. Overall, genital skin color variation is present in tamarins and may play a role in sexual signaling. Nevertheless, the patterns are inconsistent between species, suggesting interspecific variation. Future studies should integrate the perceiver's behavioral responses and the physical and social signaling environments into comprehensive studies of communication as well as consider the role and interaction between multiple sensory modalities.
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Affiliation(s)
- Lais A A Moreira
- Department of Anthropology and Archaeology, University of Calgary, Calgary, Canada
| | - Mrinalini Watsa
- Beckman Center for Conservation Research, San Diego Zoo Global, Escondido, California, USA.,Field Projects International, Saint Louis, Missouri, USA
| | - Gideon Erkenswick
- Field Projects International, Saint Louis, Missouri, USA.,Department of Biology, University of Missouri St. Louis, Saint Louis, Missouri, USA.,Department of Molecular Microbiology, Washington University School of Medicine, Saint Louis, Missouri, USA
| | - James P Higham
- Department of Anthropology, New York University, New York City, New York, USA
| | - Amanda D Melin
- Department of Anthropology and Archaeology, University of Calgary, Calgary, Canada.,Department of Medical Genetics, Alberta Children's Hospital Research Institute, University of Calgary, Calgary, Canada
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4
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Asangba AE, Mugisha L, Rukundo J, Lewis RJ, Halajian A, Cortés-Ortiz L, Junge RE, Irwin MT, Karlson J, Perkin A, Watsa M, Erkenswick G, Bales KL, Patton DL, Jasinska AJ, Fernandez-Duque E, Leigh SR, Stumpf RM. Large Comparative Analyses of Primate Body Site Microbiomes Indicate that the Oral Microbiome Is Unique among All Body Sites and Conserved among Nonhuman Primates. Microbiol Spectr 2022; 10:e0164321. [PMID: 35587638 PMCID: PMC9241786 DOI: 10.1128/spectrum.01643-21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2021] [Accepted: 04/28/2022] [Indexed: 11/20/2022] Open
Abstract
The study of the mammalian microbiome serves as a critical tool for understanding host-microbial diversity and coevolution and the impact of bacterial communities on host health. While studies of specific microbial systems (e.g., in the human gut) have rapidly increased, large knowledge gaps remain, hindering our understanding of the determinants and levels of variation in microbiomes across multiple body sites and host species. Here, we compare microbiome community compositions from eight distinct body sites among 17 phylogenetically diverse species of nonhuman primates (NHPs), representing the largest comparative study of microbial diversity across primate host species and body sites. Analysis of 898 samples predominantly acquired in the wild demonstrated that oral microbiomes were unique in their clustering, with distinctive divergence from all other body site microbiomes. In contrast, all other body site microbiomes clustered principally by host species and differentiated by body site within host species. These results highlight two key findings: (i) the oral microbiome is unique compared to all other body site microbiomes and conserved among diverse nonhuman primates, despite their considerable dietary and phylogenetic differences, and (ii) assessments of the determinants of host-microbial diversity are relative to the level of the comparison (i.e., intra-/inter-body site, -host species, and -individual), emphasizing the need for broader comparative microbial analyses across diverse hosts to further elucidate host-microbial dynamics, evolutionary and biological patterns of variation, and implications for human-microbial coevolution. IMPORTANCE The microbiome is critical to host health and disease, but much remains unknown about the determinants, levels, and evolution of host-microbial diversity. The relationship between hosts and their associated microbes is complex. Most studies to date have focused on the gut microbiome; however, large gaps remain in our understanding of host-microbial diversity, coevolution, and levels of variation in microbiomes across multiple body sites and host species. To better understand the patterns of variation and evolutionary context of host-microbial communities, we conducted one of the largest comparative studies to date, which indicated that the oral microbiome was distinct from the microbiomes of all other body sites and convergent across host species, suggesting conserved niche specialization within the Primates order. We also show the importance of host species differences in shaping the microbiome within specific body sites. This large, comparative study contributes valuable information on key patterns of variation among hosts and body sites, with implications for understanding host-microbial dynamics and human-microbial coevolution.
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Affiliation(s)
- Abigail E. Asangba
- Department of Anthropology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
| | - Lawrence Mugisha
- Ecohealth Research Group, Conservation & Ecosystem Health Alliance (CEHA), Kampala, Uganda
- Department of Wildlife & Aquatic Animal Resources, College of Veterinary Medicine, Animal Resources & Biosecurity (COVAB), Makerere University, Kampala, Uganda
| | - Joshua Rukundo
- Chimpanzee Sanctuary and Wildlife Conservation (Chimpanzee Trust), Ngamba Island, Uganda
| | - Rebecca J. Lewis
- Department of Anthropology, University of Texas at Austin, Austin, Texas, USA
| | - Ali Halajian
- Research Administration and Development, University of Limpopo, Sovenga, South Africa
| | - Liliana Cortés-Ortiz
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA
| | | | - Mitchell T. Irwin
- Department of Anthropology, Northern Illinois University, DeKalb, Illinois, USA
| | - Johan Karlson
- Tanzania Forest Conservation Group and Nocturnal Primate Research Group, Dar es Salaam, Tanzania
| | - Andrew Perkin
- Tanzania Forest Conservation Group and Nocturnal Primate Research Group, Dar es Salaam, Tanzania
| | - Mrinalini Watsa
- San Diego Zoo Wildlife Alliance, San Diego, California, USA
- Field Projects International, Escondido, California, USA
| | - Gideon Erkenswick
- Field Projects International, Escondido, California, USA
- Division of Infectious Diseases, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri, USA
| | - Karen L. Bales
- Department of Psychology, University of California Davis, Davis, California, USA
| | - Dorothy L. Patton
- Department of Obstetrics and Gynecology, University of Washington, Seattle, Washington, USA
| | - Anna J. Jasinska
- Division of Infectious Diseases, Department of Medicine, School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
- Department of Molecular Genetics, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland
| | | | - Steven R. Leigh
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Department of Anthropology, University of Colorado—Boulder, Boulder, Colorado, USA
| | - Rebecca M. Stumpf
- Department of Anthropology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Kanyanchu River Chimpanzee Project and Research Collaborative, Bigodi, Uganda
- Program in Ecology, Evolution and Conservation Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Notre Dame Institute for Advanced Study, University of Notre Dame, Notre Dame, Indiana, USA
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5
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Gerson JR, Szponar N, Zambrano AA, Bergquist B, Broadbent E, Driscoll CT, Erkenswick G, Evers DC, Fernandez LE, Hsu-Kim H, Inga G, Lansdale KN, Marchese MJ, Martinez A, Moore C, Pan WK, Purizaca RP, Sánchez V, Silman M, Ury EA, Vega C, Watsa M, Bernhardt ES. Amazon forests capture high levels of atmospheric mercury pollution from artisanal gold mining. Nat Commun 2022; 13:559. [PMID: 35091543 PMCID: PMC8799693 DOI: 10.1038/s41467-022-27997-3] [Citation(s) in RCA: 34] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Accepted: 12/16/2021] [Indexed: 11/10/2022] Open
Abstract
Mercury emissions from artisanal and small-scale gold mining throughout the Global South exceed coal combustion as the largest global source of mercury. We examined mercury deposition and storage in an area of the Peruvian Amazon heavily impacted by artisanal gold mining. Intact forests in the Peruvian Amazon near gold mining receive extremely high inputs of mercury and experience elevated total mercury and methylmercury in the atmosphere, canopy foliage, and soils. Here we show for the first time that an intact forest canopy near artisanal gold mining intercepts large amounts of particulate and gaseous mercury, at a rate proportional with total leaf area. We document substantial mercury accumulation in soils, biomass, and resident songbirds in some of the Amazon's most protected and biodiverse areas, raising important questions about how mercury pollution may constrain modern and future conservation efforts in these tropical ecosystems.
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Affiliation(s)
- Jacqueline R Gerson
- Department of Biology, Duke University, Durham, NC, 27708, USA.
- Duke Global Health Institute, Duke University, Durham, NC, 27708, USA.
| | - Natalie Szponar
- Department of Earth Sciences, University of Toronto, Toronto, ON, M5S 3B1, Canada
| | | | - Bridget Bergquist
- Department of Earth Sciences, University of Toronto, Toronto, ON, M5S 3B1, Canada
| | - Eben Broadbent
- School of Forest Resources and Conservation, University of Florida, Gainesville, FL, 32611, USA
| | - Charles T Driscoll
- Department of Civil and Environmental Engineering, Syracuse University, Syracuse, NY, 13244, USA
| | - Gideon Erkenswick
- Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO, 63110, USA
- Field Projects International, Escondido, CA, 92029, USA
| | - David C Evers
- Biodiversity Research Institute, Portland, ME, 04103, USA
| | - Luis E Fernandez
- Centro de Innovación Científica Amazónica (CINCIA), Puerto Maldonado, Peru
- Center for Energy, Environment, and Sustainability (CEES), Wake Forest University, Winston-Salem, NC, 27109, USA
- Department of Biology, Wake Forest University, Winston-Salem, NC, 27109, USA
| | - Heileen Hsu-Kim
- Department of Civil and Environmental Engineering, Duke University, Durham, NC, 27708, USA
| | - Giancarlo Inga
- San Diego Zoo Wildlife Alliance, San Diego, CA, 92101, USA
| | - Kelsey N Lansdale
- Environmental Science Program, Duke University, Durham, NC, 27708, USA
| | - Melissa J Marchese
- Duke Global Health Institute, Duke University, Durham, NC, 27708, USA
- Nicholas School of the Environment, Duke University, Durham, NC, 27708, USA
| | - Ari Martinez
- Department of Biological Sciences, California State University, Long Beach, CA, 90840, USA
| | - Caroline Moore
- San Diego Zoo Wildlife Alliance, San Diego, CA, 92101, USA
| | - William K Pan
- Duke Global Health Institute, Duke University, Durham, NC, 27708, USA
- Nicholas School of the Environment, Duke University, Durham, NC, 27708, USA
| | | | - Victor Sánchez
- Instituto de Investigación en Ecología y Conservación (IIECOO), La Libertad, Peru
| | - Miles Silman
- Centro de Innovación Científica Amazónica (CINCIA), Puerto Maldonado, Peru
- Center for Energy, Environment, and Sustainability (CEES), Wake Forest University, Winston-Salem, NC, 27109, USA
- Department of Biology, Wake Forest University, Winston-Salem, NC, 27109, USA
| | - Emily A Ury
- Department of Biology, Duke University, Durham, NC, 27708, USA
| | - Claudia Vega
- Centro de Innovación Científica Amazónica (CINCIA), Puerto Maldonado, Peru
- Center for Energy, Environment, and Sustainability (CEES), Wake Forest University, Winston-Salem, NC, 27109, USA
- Department of Biology, Wake Forest University, Winston-Salem, NC, 27109, USA
| | - Mrinalini Watsa
- Field Projects International, Escondido, CA, 92029, USA
- San Diego Zoo Wildlife Alliance, San Diego, CA, 92101, USA
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6
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Abstract
Abstract
Background
Non-invasive biomarkers can facilitate health assessments in wild primate populations by reducing the need for direct access to animals. Neopterin is a biomarker that is a product of the cell-mediated immune response, with high levels being indicative of poor survival expectations in some cases. The measurement of urinary neopterin concentration (UNC) has been validated as a method for monitoring cell-mediated immune system activation in multiple catarrhine species, but to date there is no study testing its utility in the urine of platyrrhine species. In this study, we collected urine samples across three platyrrhine families including small captive populations of Leontopithecus rosalia and Pithecia pithecia, and larger wild populations of Leontocebus weddelli, Saguinus imperator, Alouatta seniculus, and Plecturocebus toppini, to evaluate a commercial enzyme-linked immunosorbent assay (ELISA) for the measurement of urinary neopterin in platyrrhines.
Results
Our results revealed measured UNC fell within the sensitivity range of the assay in all urine samples collected from captive and wild platyrrhine study species via commercial ELISA, and results from several dilutions met expectations. We found significant differences in the mean UNC across all study species. Most notably, we observed higher UNC in the wild population of L. weddelli which is known to have two filarial nematode infections compared to S. imperator, which only have one.
Conclusion
Our study confirms that neopterin is measurable via commercial ELISA in urine collected from captive and wild individuals of six genera of platyrrhines across three different families. These findings promote the future utility of UNC as a promising biomarker for field primatologists conducting research in Latin America to non-invasively evaluate cell-mediated immune system activation from urine.
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7
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Robakis E, Watsa M, Erkenswick G. Classification of producer characteristics in primate long calls using neural networks. J Acoust Soc Am 2018; 144:344. [PMID: 30075650 DOI: 10.1121/1.5046526] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Accepted: 06/28/2018] [Indexed: 06/08/2023]
Abstract
Primate long calls are high-amplitude vocalizations that can be critical in maintaining intragroup contact and intergroup spacing, and can encode abundant information about a call's producer, such as age, sex, and individual identity. Long calls of the wild emperor (Saguinus imperator) and saddleback (Leontocebus weddelli) tamarins were tested for these identity signals using artificial neural networks, machine-learning models that reduce subjectivity in vocalization classification. To assess whether modelling could be streamlined by using only factors which were responsible for the majority of variation within networks, each series of networks was re-trained after implementing two methods of feature selection. First, networks were trained and run using only the subset of variables whose weights accounted for ≥50% of each original network's variation, as identified by the networks themselves. In the second, only variables implemented by decision trees in predicting outcomes were used. Networks predicted dependent variables above chance (≥58.7% for sex, ≥69.2 for age class, and ≥38.8% for seven to eight individuals), but classification accuracy was not markedly improved by feature selection. Findings are discussed with regard to implications for future studies on identity signaling in vocalizations and streamlining of data analysis.
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Affiliation(s)
- Efstathia Robakis
- Washington University in Saint Louis, One Brookings Drive, St. Louis, Missouri 63130, USA
| | - Mrinalini Watsa
- Field Projects International, 7331 Murdoch Avenue, St. Louis, Missouri 63119, USA
| | - Gideon Erkenswick
- Field Projects International, 7331 Murdoch Avenue, St. Louis, Missouri 63119, USA
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