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Kim Tiam S, Comte K, Dalle C, Delagrange M, Djediat C, Ducos B, Duval C, Feilke K, Hamlaoui S, Le Manach S, Setif P, Yéprémian C, Marie B, Kirilovsky D, Gugger M, Bernard C. The success of the bloom-forming cyanobacteria Planktothrix: Genotypes variability supports variable responses to light and temperature stress. Harmful Algae 2022; 117:102285. [PMID: 35944963 DOI: 10.1016/j.hal.2022.102285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Revised: 05/05/2022] [Accepted: 06/28/2022] [Indexed: 06/15/2023]
Abstract
Cyanobacterial blooms can modify the dynamic of aquatic ecosystems and have harmful consequences for human activities. Moreover, cyanobacteria can produce a variety of cyanotoxins, including microcystins, but little is known about the role of environmental factors on the prevalence of microcystin producers in the cyanobacterial bloom dynamics. This study aimed to better understand the success of Planktothrix in various environments by unveiling the variety of strategies governing cell responses to sudden changes in light intensity and temperature. The cellular responses (photosynthesis, photoprotection, heat shock response and metabolites synthesis) of four Planktothrix strains to high-light or high-temperature were studied, focusing on how distinct ecotypes (red- or green-pigmented) and microcystin production capability affect cyanobacteria's ability to cope with such abiotic stimuli. Our results showed that high-light and high-temperature impact different cellular processes and that Planktothrix responses are heterogeneous, specific to each strain and thus, to genotype. The ability of cyanobacteria to cope with sudden increase in light intensity and temperature was not related to red- or green-pigmented ecotype or microcystin production capability. According to our results, microcystin producers do not cope better to high-light or high-temperature and microcystin content does not increase in response to such stresses.
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Affiliation(s)
- Sandra Kim Tiam
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France.
| | - Katia Comte
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France
| | - Caroline Dalle
- Institut Pasteur, Université Paris Cité, Collection of Cyanobacteria, Paris, F-75015, France
| | - Marine Delagrange
- Laboratoire de Physique Statistique, École Normale Supérieure, PSL Research University, Université Paris Diderot Sorbonne Paris-Cité, Sorbonne Université UPMC Paris 06, CNRS, High Throughput qPCR Core Facility of the ENS, IBENS, 46 rue d'Ulm, Paris,, 75005 France
| | - Chakib Djediat
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France
| | - Bertrand Ducos
- Laboratoire de Physique Statistique, École Normale Supérieure, PSL Research University, Université Paris Diderot Sorbonne Paris-Cité, Sorbonne Université UPMC Paris 06, CNRS, High Throughput qPCR Core Facility of the ENS, IBENS, 46 rue d'Ulm, Paris,, 75005 France
| | - Charlotte Duval
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France
| | - Kathleen Feilke
- Institute for Integrative Biology of the Cell (I2BC), CNRS, CEA, Université Paris-Sud, Université Paris-Saclay, Gif sur Yvette, 91198, France
| | - Sahima Hamlaoui
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France
| | - Séverine Le Manach
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France
| | - Pierre Setif
- Institute for Integrative Biology of the Cell (I2BC), CNRS, CEA, Université Paris-Sud, Université Paris-Saclay, Gif sur Yvette, 91198, France
| | - Claude Yéprémian
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France
| | - Benjamin Marie
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France
| | - Diana Kirilovsky
- Institute for Integrative Biology of the Cell (I2BC), CNRS, CEA, Université Paris-Sud, Université Paris-Saclay, Gif sur Yvette, 91198, France
| | - Muriel Gugger
- Institut Pasteur, Université Paris Cité, Collection of Cyanobacteria, Paris, F-75015, France.
| | - Cécile Bernard
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes (MCAM), Muséum National d'Histoire Naturelle, CNRS, CP 39, 57 rue Cuvier, Paris, 75005, France.
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Kim Tiam S, Comte K, Dalle C, Duval C, Pancrace C, Gugger M, Marie B, Yéprémian C, Bernard C. Development of a new extraction method based on high-intensity ultra-sonication to study RNA regulation of the filamentous cyanobacteria Planktothrix. PLoS One 2019; 14:e0222029. [PMID: 31490972 PMCID: PMC6730872 DOI: 10.1371/journal.pone.0222029] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2019] [Accepted: 08/20/2019] [Indexed: 11/24/2022] Open
Abstract
Efficient RNA extraction methods are needed to study transcript regulation. Such methods must lyse the cell without degrading the genetic material. For cyanobacteria this can be particularly challenging because of the presence of the cyanobacteria cell envelope. The great breath of cyanobacterial shape and size (unicellular, colonial, or filamentous multicellular) created a variety of cell lysis methods. However, there is still a lack of reliable techniques for nucleic acid extraction for several types of cyanobacteria. Here we designed and tested 15 extraction methods using physical, thermic or chemical stress on the filamentous cyanobacteria Planktothrix agardhii. Techniques based on the use of beads, sonication, and heat shock appeared to be too soft to break the Planktothrix agardhii cell envelope, whereas techniques based on the use of detergents degraded the cell envelope but also the RNA. Two protocols allowed to successfully obtain good-quality RNA. The first protocol consisted to manually crush the frozen cell pellet with a pestle and the second was based on the use of high-intensity ultra-sonication. When comparing these two, the high-intensity ultra-sonication protocol was less laborious, faster and allowed to extract 3.5 times more RNA compared to the liquid nitrogen pestle protocol. The high-intensity ultra-sonication protocol was then tested on five Planktothrix strains, this protocol allowed to obtain >8.5 μg of RNA for approximatively 3.5 × 108 cells. The extracted RNA were characterized by 260/280 and 260/230 ratio > to 2, indicating that the samples were devoid of contaminant, and RNA Quality Number > to 7, meaning that the integrity of RNA was preserved with this extraction method. In conclusion, the method we developed based on high-intensity ultra-sonication proved its efficacy in the extraction of Planktothrix RNA and could be helpful for other types of samples.
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Affiliation(s)
- Sandra Kim Tiam
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes, Muséum National d’Histoire Naturelle, Paris, France
- * E-mail: (SKT); (CB)
| | - Katia Comte
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes, Muséum National d’Histoire Naturelle, Paris, France
| | - Caroline Dalle
- Collection des Cyanobactéries, Institut Pasteur, Paris, France
| | - Charlotte Duval
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes, Muséum National d’Histoire Naturelle, Paris, France
| | - Claire Pancrace
- Collection des Cyanobactéries, Institut Pasteur, Paris, France
| | - Muriel Gugger
- Collection des Cyanobactéries, Institut Pasteur, Paris, France
| | - Benjamin Marie
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes, Muséum National d’Histoire Naturelle, Paris, France
| | - Claude Yéprémian
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes, Muséum National d’Histoire Naturelle, Paris, France
| | - Cécile Bernard
- UMR 7245 Molécules de Communication et Adaptations des Microorganismes, Muséum National d’Histoire Naturelle, Paris, France
- * E-mail: (SKT); (CB)
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Combes A, Dellinger M, Cadel-six S, Amand S, Comte K. Ciliate Nassula sp. grazing on a microcystin-producing cyanobacterium (Planktothrix agardhii): impact on cell growth and in the microcystin fractions. Aquat Toxicol 2013; 126:435-441. [PMID: 23010390 DOI: 10.1016/j.aquatox.2012.08.018] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2012] [Revised: 08/22/2012] [Accepted: 08/24/2012] [Indexed: 06/01/2023]
Abstract
The proliferation of microcystins (MCs)-producing cyanobacteria (MCs) can have detrimental effects on the food chain in aquatic environments. Until recently, few studies had focused on the fate of MCs in exposed organisms, such as primary consumers of cyanobacteria. In this study, we investigate the impact of an MC-producing strain of the cyanobacterium Planktothrix agardhii on the growth and physiology of a Nassula sp. ciliate isolated from a non-toxic cyanobacterial bloom. We show that this Nassula sp. strain was able to consume and grow while feeding exclusively on an MC-producing cyanobacterium over a prolonged period of time (8 months). In short-term exposure experiments (8 days), ciliates consuming an MC-producing cyanobacterial strain displayed slower growth rate and higher levels of antioxidant enzymes than ciliates feeding on two non-MC-producing strains. Three high-performance methods (LC/MS, LC/MS-MS and ELISA) were used to quantify the free and bound MCs in the culture medium and in the cells. We show that ciliate grazing led to a marked decrease in free MCs (methanol extractable) in cells, the MCs were therefore no longer found in the surrounding culture medium. These findings suggest that MCs may have undergone redistribution (free vs bound MCs) or chemical degradation within the ciliates.
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Affiliation(s)
- Audrey Combes
- "Molécules de communication et adaptation des microorganismes", UMR CNRS-MNHN, Muséum national d'Histoire naturelle, Paris, France
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Djediat C, Moyenga D, Malécot M, Comte K, Yéprémian C, Bernard C, Puiseux-Dao S, Edery M. Oral toxicity of extracts of the microcystin-containing cyanobacterium Planktothrix agardhii to the medaka fish (Oryzias latipes). Toxicon 2011; 58:112-22. [PMID: 21635913 DOI: 10.1016/j.toxicon.2011.05.011] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2011] [Revised: 05/10/2011] [Accepted: 05/17/2011] [Indexed: 01/01/2023]
Abstract
As previously demonstrated the medaka fish appears to offer a good model for studies of microcystins (MCs) effects. Since cyanobacterial toxins are released with other molecules in the aquatic environment when the producers are dying, in this study, we performed additional experiments in order to compare the described effects obtained with the pure toxin microcystin-LR (MC-LR), among the most toxic MCs, to those induced by complex extracts of an MCs-producer Planktothrix agardhii, strain PMC 75.02 and a natural bloom containing the MCs-producer P. agardhii. The toxicity of these extracts containing several variants of MC was determined in adult medaka treated by gavage. Extracts of an MCs-free strain of P. agardhii (PMC 87.02) were assayed for comparison. Extracts effects were analysed on two tissues, liver and intestine by means of photon and transmission electron microscopy. MC was localized in these tissues by immunocytochemistry. No effect was detectable with extracts of the MCs-free P. agardhii strain. The two MCs-P. agardhii extracts (strain and natural bloom) were able to induce harmful effects in the liver and intestine of the medaka fish in acute intoxication by gavage. In these target organs as shown by toxin immunolocalization, reactions leading to cell disjunction and lysis were observed apparently associated with an immune reaction implying MC containing macrophages. These effects are similar to those previously described with photonic microscopy in medaka treated with pure MC-LR with additional results obtained under the electron microscope. Since no significant effect was detected with the MCs-free (PMC 87.02) extract, we then conclude that MCs, even in complex association with other cyanobacterial components, should be responsible for the toxic effects observed in treated fish.
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Affiliation(s)
- Chakib Djediat
- Plateforme de Microscopie Electronique, Muséum National d'Histoire Naturelle, 12 Rue Buffon, F-75231 Paris Cedex 05, France
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Abstract
Uptake of several naturally occurring organic solutes by the unicellular cyanobacterium Microcystis sp. caused changes in cell turgor pressure (p(t)), which was determined by measuring the mean critical pressure (p(c)) of gas vesicles in the cells. Cells had an initial p(t) of 0.34 MPa, which decreased to 0.08 MPa in 0.15 M sucrose. In solutions of polyols, p(t) gradually recovered as the solutes penetrated the cytoplasmic membranes. From measurements of the exponential rate of turgor increase, cell volume and surface area, the permeability coefficient of the cytoplasmic membrane to each solute was calculated. Permeabilities to amino acids, ammonium ions and sodium acetate indicated little passive movement of these substances across the cell surface from solutions at high concentrations. We looked for evidence of ion trapping of acetic acid: at low pH there was a rapid rise in turgor pressure indicating a rapid uptake of this weak acid. After 20 min the turgor was lost, apparently due to loss of integrity of the cell membranes. For cells in natural habitats, studies of the permeability of cells to solutes is relevant to the problem of retaining substances that are accumulated by active uptake from solutions of low concentrations in natural waters.
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Affiliation(s)
- Katia Comte
- School of Biological Sciences, University of Bristol, Bristol, UK
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Comte K, Sabacká M, Carré-Mlouka A, Elster J, Komárek J. Relationships between the Arctic and the Antarctic cyanobacteria; three Phormidium-like strains evaluated by a polyphasic approach. FEMS Microbiol Ecol 2007; 59:366-76. [PMID: 17313583 DOI: 10.1111/j.1574-6941.2006.00257.x] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
Selected strains of filamentous Phormidium-like cyanobacteria isolated from two Arctic regions (Ellesmere Island, High Canadian Arctic and Svalbard) and from Antarctica (Antarctic peninsula, South Shetland Islands and South Orkney Islands) were studied. The polyphasic approach used included phenotypic observations of morphological features and genotypic analyses (restriction fragment length polymorphism of 16S rRNA gene, internal transcribed space, 16S rRNA gene sequence analysis). Although genotypes generally correspond to observed morphotypes, the genetic analyses revealed a high degree of biodiversity that could not be unveiled using solely morphological evaluations. According to the phylogenetic analysis, the three clones were divided into two major clades, indicating that the phylogenetic distance between Arct-Ph5/Ant-Ph68 and Ant-Ph58 was so large they belonged to different genera. The polyphyletic position of strains of the genus Phormidium was confirmed by this study, attesting the need to entirely revise classification in this taxon in the future.
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Affiliation(s)
- Katia Comte
- Institute of Botany, Academy of Sciences of the Czech Republic, Trebon and Faculty of Biological Sciences, University of South Bohemia, Ceské Budejovice, Czech Republic.
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Mlouka A, Comte K, Castets AM, Bouchier C, Tandeau de Marsac N. The gas vesicle gene cluster from Microcystis aeruginosa and DNA rearrangements that lead to loss of cell buoyancy. J Bacteriol 2004; 186:2355-65. [PMID: 15060038 PMCID: PMC412153 DOI: 10.1128/jb.186.8.2355-2365.2004] [Citation(s) in RCA: 88] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Microcystis aeruginosa is a planktonic unicellular cyanobacterium often responsible for seasonal mass occurrences at the surface of freshwater environments. An abundant production of intracellular structures, the gas vesicles, provides cells with buoyancy. A 8.7-kb gene cluster that comprises twelve genes involved in gas vesicle synthesis was identified. Ten of these are organized in two operons, gvpA(I)A(II)A(III)CNJX and gvpKFG, and two, gvpV and gvpW, are individually expressed. In an attempt to elucidate the basis for the frequent occurrence of nonbuoyant mutants in laboratory cultures, four gas vesicle-deficient mutants from two strains of M. aeruginosa, PCC 7806 and PCC 9354, were isolated and characterized. Their molecular analysis unveiled DNA rearrangements due to four different insertion elements that interrupted gvpN, gvpV, or gvpW or led to the deletion of the gvpA(I)-A(III) region. While gvpA, encoding the major gas vesicle structural protein, was expressed in the gvpN, gvpV, and gvpW mutants, immunodetection revealed no corresponding GvpA protein. Moreover, the absence of a gas vesicle structure was confirmed by electron microscopy. This study brings out clues concerning the process driving loss of buoyancy in M. aeruginosa and reveals the requirement for gas vesicle synthesis of two newly described genes, gvpV and gvpW.
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Affiliation(s)
- Alyssa Mlouka
- Unité des Cyanobactéries (URA-CNRS 2172), Département de Microbiologie fondamentale et médicale, Institut Pasteur, 75724 Paris Cedex 15, France
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