1
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Ashuiev A, Allouche F, Islam MA, Carvalho JP, Sanders KJ, Conley MP, Klose D, Lapadula G, Wörle M, Baabe D, Walter MD, Pell AJ, Copéret C, Jeschke G, Pintacuda G, Andersen RA. Geometry and electronic structure of Yb(III)[CH(SiMe 3) 2] 3 from EPR and solid-state NMR augmented by computations. Phys Chem Chem Phys 2024; 26:8734-8747. [PMID: 38416412 PMCID: PMC10936694 DOI: 10.1039/d4cp00281d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 02/12/2024] [Indexed: 02/29/2024]
Abstract
Characterization of paramagnetic compounds, in particular regarding the detailed conformation and electronic structure, remains a challenge, and - still today it often relies solely on the use of X-ray crystallography, thus limiting the access to electronic structure information. This is particularly true for lanthanide elements that are often associated with peculiar structural and electronic features in relation to their partially filled f-shell. Here, we develop a methodology based on the combined use of state-of-the-art magnetic resonance spectroscopies (EPR and solid-state NMR) and computational approaches as well as magnetic susceptibility measurements to determine the electronic structure and geometry of a paramagnetic Yb(III) alkyl complex, Yb(III)[CH(SiMe3)2]3, a prototypical example, which contains notable structural features according to X-ray crystallography. Each of these techniques revealed specific information about the geometry and electronic structure of the complex. Taken together, both EPR and NMR, augmented by quantum chemical calculations, provide a detailed and complementary understanding of such paramagnetic compounds. In particular, the EPR and NMR signatures point to the presence of three-centre-two-electron Yb-γ-Me-β-Si secondary metal-ligand interactions in this otherwise tri-coordinate metal complex, similarly to its diamagnetic Lu analogues. The electronic structure of Yb(III) can be described as a single 4f13 configuration, while an unusually large crystal-field splitting results in a thermally isolated ground Kramers doublet. Furthermore, the computational data indicate that the Yb-carbon bond contains some π-character, reminiscent of the so-called α-H agostic interaction.
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Affiliation(s)
- Anton Ashuiev
- Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5, 8093 Zurich, Switzerland.
| | - Florian Allouche
- Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5, 8093 Zurich, Switzerland.
| | - Md Ashraful Islam
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, Université Claude Bernard Lyon 1), F-69100 Villeurbanne, France.
| | - José P Carvalho
- Department of Materials and Environmental Chemistry, Stockholm University, Svänte Arrhenius väg 16 C, 106 91 Stockholm, Sweden
| | - Kevin J Sanders
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, Université Claude Bernard Lyon 1), F-69100 Villeurbanne, France.
| | - Matthew P Conley
- Department of Chemistry and Chemical Sciences, University of California Riverside, 501 Big Springs Road, Riverside, CA 92521, USA
| | - Daniel Klose
- Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5, 8093 Zurich, Switzerland.
| | - Giuseppe Lapadula
- Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5, 8093 Zurich, Switzerland.
| | - Michael Wörle
- Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5, 8093 Zurich, Switzerland.
| | - Dirk Baabe
- Institut für Anorganische und Analytische Chemie, Technische Universität Braunschweig, Hagenring 30, 38106 Braunschweig, Germany
| | - Marc D Walter
- Institut für Anorganische und Analytische Chemie, Technische Universität Braunschweig, Hagenring 30, 38106 Braunschweig, Germany
| | - Andrew J Pell
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, Université Claude Bernard Lyon 1), F-69100 Villeurbanne, France.
| | - Christophe Copéret
- Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5, 8093 Zurich, Switzerland.
| | - Gunnar Jeschke
- Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5, 8093 Zurich, Switzerland.
| | - Guido Pintacuda
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, Université Claude Bernard Lyon 1), F-69100 Villeurbanne, France.
| | - Richard A Andersen
- Department of Chemistry, University of California, Berkeley, CA 94720, USA
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2
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Sanders KJ, Ciezki AA, Berno A, Halalay IC, Goward GR. Quantitative Operando 7Li NMR Investigations of Silicon Anode Evolution during Fast Charging and Extended Cycling. J Am Chem Soc 2023; 145:21502-21513. [PMID: 37733021 DOI: 10.1021/jacs.3c07339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/22/2023]
Abstract
The development and optimization of fast battery charging protocols require detailed information regarding lithium speciation inside a battery. Nuclear magnetic resonance (NMR) spectroscopy has the unique capability of identifying the Li phases formed in an anode during Li-ion cell operation and quantifying their relative amounts. In addition, both Li metal films and dendrites are readily detected and quantified. Here, our recently reported parallel-plate resonator radio frequency (RF) probe and the cartridge-type single-layer full cell were used to track the behavior of Si electrodes during cycling and during fast charging. The LixSi compounds formed during electrochemical cycling exhibit an unexpected intrinsic nonequilibrium behavior at both slow and fast rates, evolving toward increasingly disordered local environments. The evolution with time of lithiated phases is nonlinear during both charging and discharging at constant current, unlike the case for pure graphite, and asymmetric between charge and discharge. During charging at rates of 1C, 2C, and 3C, metallic Li in both films and (to a lesser extent) dendritic forms are deposited on the Si anode. Part of the Li metal film formation is reversible, but a fraction remains on the electrode surface as dead Li, while all of the dendritic Li, even though formed in a considerably smaller amount, is entirely irreversible. Such performance-governing properties are critical to the development of fast-charging protocols for lithium-ion batteries (LIBs) and are exceptionally well evaluated and quantified by 7Li magnetic resonance strategies such as those presented here.
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Affiliation(s)
- Kevin J Sanders
- Department of Chemistry, McMaster University, 1280 Main Street West Hamilton, Ontario, Canada L8S 4L8
| | - Amanda A Ciezki
- Department of Chemistry, McMaster University, 1280 Main Street West Hamilton, Ontario, Canada L8S 4L8
| | - Alexander Berno
- Department of Chemistry, McMaster University, 1280 Main Street West Hamilton, Ontario, Canada L8S 4L8
| | - Ion C Halalay
- General Motors Research and Development, Warren, Michigan 48092, United States
| | - Gillian R Goward
- Department of Chemistry, McMaster University, 1280 Main Street West Hamilton, Ontario, Canada L8S 4L8
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3
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Pei Y, Chen Q, Ha Y, Su D, Zhou H, Li S, Yao Z, Ma L, Sanders KJ, Sheng C, Goward GR, Gu L, Yu A, Yang W, Chen Z. Fluorinated Rocksalt Cathode with Ultra‐high Active Li Content for Lithium‐ion Batteries. Angew Chem Int Ed Engl 2022; 61:e202212471. [DOI: 10.1002/anie.202212471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Indexed: 11/06/2022]
Affiliation(s)
- Yi Pei
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
| | - Qing Chen
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
| | - Yang Ha
- Advanced Light Source Lawrence Berkeley National Laboratory Berkeley California 94720 USA
| | - Dong Su
- Beijing National Laboratory for Condensed Matter Physics Institute of Physics Chinese Academy of Sciences Beijing 100190 China
| | - Hua Zhou
- Advanced Photon Source Argonne National Laboratory Lemont IL 60439 USA
| | - Shuang Li
- Center for Functional Nanomaterials Brookhaven National Laboratory Upton NY 11973 USA
| | - Zhenpeng Yao
- Department of Chemistry and Department of Computer Science University of Toronto Toronto Ontario M5S 3H6 Canada
| | - Lu Ma
- National Synchrotron Light Source II Brookhaven National Laboratory Upton NY 11973 USA
| | - Kevin J. Sanders
- Department of Chemistry McMaster University Hamilton ON L8S 4 L8 Canada
| | - Chuanchao Sheng
- Center of Energy Storage Materials & Technology College of Engineering and Applied Sciences National Laboratory of Solid State Microstructures Collaborative Innovation Center of Advanced Microstructures Nanjing University Nanjing 210093 China
| | - Gillian R. Goward
- Department of Chemistry McMaster University Hamilton ON L8S 4 L8 Canada
| | - Lin Gu
- Beijing National Laboratory for Condensed Matter Physics Institute of Physics Chinese Academy of Sciences Beijing 100190 China
| | - Aiping Yu
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
| | - Wanli Yang
- Advanced Light Source Lawrence Berkeley National Laboratory Berkeley California 94720 USA
| | - Zhongwei Chen
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
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Pei Y, Chen Q, Ha Y, Su D, Zhou H, Li S, Yao Z, Ma L, Sanders KJ, Sheng C, Goward GR, Gu L, Yu A, Yang W, Chen Z. Fluorinated Rocksalt Cathode with Ultra‐high Active Li Content for Lithium‐ion Batteries. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202212471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Yi Pei
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
| | - Qing Chen
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
| | - Yang Ha
- Advanced Light Source Lawrence Berkeley National Laboratory Berkeley California 94720 USA
| | - Dong Su
- Beijing National Laboratory for Condensed Matter Physics Institute of Physics Chinese Academy of Sciences Beijing 100190 China
| | - Hua Zhou
- Advanced Photon Source Argonne National Laboratory Lemont IL 60439 USA
| | - Shuang Li
- Center for Functional Nanomaterials Brookhaven National Laboratory Upton NY 11973 USA
| | - Zhenpeng Yao
- Department of Chemistry and Department of Computer Science University of Toronto Toronto Ontario M5S 3H6 Canada
| | - Lu Ma
- National Synchrotron Light Source II Brookhaven National Laboratory Upton NY 11973 USA
| | - Kevin J. Sanders
- Department of Chemistry McMaster University Hamilton ON L8S 4 L8 Canada
| | - Chuanchao Sheng
- Center of Energy Storage Materials & Technology College of Engineering and Applied Sciences National Laboratory of Solid State Microstructures Collaborative Innovation Center of Advanced Microstructures Nanjing University Nanjing 210093 China
| | - Gillian R. Goward
- Department of Chemistry McMaster University Hamilton ON L8S 4 L8 Canada
| | - Lin Gu
- Beijing National Laboratory for Condensed Matter Physics Institute of Physics Chinese Academy of Sciences Beijing 100190 China
| | - Aiping Yu
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
| | - Wanli Yang
- Advanced Light Source Lawrence Berkeley National Laboratory Berkeley California 94720 USA
| | - Zhongwei Chen
- Department of Chemical Engineering Waterloo Institute for Nanotechnology University of Waterloo Waterloo Ontario N2 L 3G1 Canada
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Blahut J, Benda L, Lejeune AL, Sanders KJ, Burcher B, Jeanneau E, Proriol D, Catita L, Breuil PAR, Quoineaud AA, Pell AJ, Pintacuda G. Proton-detected fast-magic-angle spinning NMR of paramagnetic inorganic solids. RSC Adv 2021; 11:29870-29876. [PMID: 35479571 PMCID: PMC9040908 DOI: 10.1039/d1ra04110j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Accepted: 08/17/2021] [Indexed: 02/01/2023] Open
Abstract
Fast (60 kHz) magic angle spinning solid-state NMR allows very sensitive proton detection in highly paramagnetic organometallic powders. We showcase this technique with the complete assignment of 1H and 13C resonances in a high-spin Fe(ii) polymerisation catalyst with less than 2 mg of sample at natural abundance.
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Affiliation(s)
- Jan Blahut
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, UCB Lyon 1) 5 rue de la Doua 69100 Villeurbanne France
| | - Ladislav Benda
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, UCB Lyon 1) 5 rue de la Doua 69100 Villeurbanne France
| | - Arthur L Lejeune
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, UCB Lyon 1) 5 rue de la Doua 69100 Villeurbanne France .,IFP Energies Nouvelles, Rond-point de l'échangeur de Solaize 69360 Solaize France
| | - Kevin J Sanders
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, UCB Lyon 1) 5 rue de la Doua 69100 Villeurbanne France
| | - Benjamin Burcher
- IFP Energies Nouvelles, Rond-point de l'échangeur de Solaize 69360 Solaize France
| | - Erwann Jeanneau
- Université de Lyon, Centre de Diffractométrie Henri Longchambon (UCB Lyon 1) 5 rue de la Doua 69100 Villeurbanne France
| | - David Proriol
- IFP Energies Nouvelles, Rond-point de l'échangeur de Solaize 69360 Solaize France
| | - Leonor Catita
- IFP Energies Nouvelles, Rond-point de l'échangeur de Solaize 69360 Solaize France
| | | | | | - Andrew J Pell
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, UCB Lyon 1) 5 rue de la Doua 69100 Villeurbanne France .,Stockholm University, Department of Materials and Environmental Chemistry Svante Arrhenius väg 16C SE-106 91 Stockholm Sweden
| | - Guido Pintacuda
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon (UMR 5082 - CNRS, ENS Lyon, UCB Lyon 1) 5 rue de la Doua 69100 Villeurbanne France
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6
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Aguilera AR, MacMillan B, Krachkovskiy S, Sanders KJ, Alkhayri F, Adam Dyker C, Goward GR, Balcom BJ. A parallel-plate RF probe and battery cartridge for 7Li ion battery studies. J Magn Reson 2021; 325:106943. [PMID: 33647764 DOI: 10.1016/j.jmr.2021.106943] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Revised: 01/24/2021] [Accepted: 02/02/2021] [Indexed: 06/12/2023]
Abstract
A new parallel-plate resonator for 7Li ion cell studies is introduced along with a removable cartridge-like electrochemical cell for lithium ion battery studies. This geometry separates the RF probe from the electrochemical cell permitting charge/discharge of the cell outside the magnet and introduces the possibility of multiplexing samples under test. The new cell has a geometry that is similar to that of a real battery, unlike the majority of cells employed for MR/MRI studies to this point. The cell, with electrodes parallel to the B1 magnetic field of the probe, avoids RF attenuation during excitation/reception. The cell and RF probe dramatically increase the sample volume compared to traditional MR compatible battery designs. Ex situ and in situ 1D 7Li profiles of Li ions in the electrolyte solution of a cartridge-like cell were acquired, with a nominal resolution of 35 µm at 38 MHz. The cell and RF probe may be employed for spectroscopy, imaging and relaxation studies. We also report the results of a T1-T2 relaxation correlation experiment on both a pristine and fully charged cell. This study represents the first T1-T2 relaxation correlation experiment performed in a Li ion cell. The T1-T2 correlation maps suggest lithium intercalated into graphite is detected by this methodology in addition to other Li species.
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Affiliation(s)
- Andrés Ramírez Aguilera
- UNB MRI Centre, Department of Physics, University of New Brunswick, Fredericton, New Brunswick E3B 5A3, Canada
| | - Bryce MacMillan
- UNB MRI Centre, Department of Physics, University of New Brunswick, Fredericton, New Brunswick E3B 5A3, Canada
| | - Sergey Krachkovskiy
- Department of Chemistry, McMaster University, Hamilton, Ontario L8S 4L8, Canada
| | - Kevin J Sanders
- Department of Chemistry, McMaster University, Hamilton, Ontario L8S 4L8, Canada
| | - Fahad Alkhayri
- Department of Chemistry, University of New Brunswick, P.O. Box 4400, Fredericton, New Brunswick E3B 5A3, Canada
| | - C Adam Dyker
- Department of Chemistry, University of New Brunswick, P.O. Box 4400, Fredericton, New Brunswick E3B 5A3, Canada
| | - Gillian R Goward
- Department of Chemistry, McMaster University, Hamilton, Ontario L8S 4L8, Canada
| | - Bruce J Balcom
- UNB MRI Centre, Department of Physics, University of New Brunswick, Fredericton, New Brunswick E3B 5A3, Canada.
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7
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Bertarello A, Benda L, Sanders KJ, Pell AJ, Knight MJ, Pelmenschikov V, Gonnelli L, Felli IC, Kaupp M, Emsley L, Pierattelli R, Pintacuda G. Picometer Resolution Structure of the Coordination Sphere in the Metal-Binding Site in a Metalloprotein by NMR. J Am Chem Soc 2020; 142:16757-16765. [PMID: 32871082 DOI: 10.1021/jacs.0c07339] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Most of our understanding of chemistry derives from atomic-level structures obtained with single-crystal X-ray diffraction. Metal centers in X-ray structures of small organometallic or coordination complexes are often extremely well-defined, with errors in the positions on the order of 10-4-10-5 Å. Determining the metal coordination geometry to high accuracy is essential for understanding metal center reactivity, as even small structural changes can dramatically alter the metal activity. In contrast, the resolution of X-ray structures in proteins is limited typically to the order of 10-1 Å. This resolution is often not sufficient to develop precise structure-activity relations for the metal sites in proteins, because the uncertainty in positions can cover all of the known ranges of bond lengths and bond angles for a given type of metal complex. Here we introduce a new approach that enables the determination of a high-definition structure of the active site of a metalloprotein from a powder sample, by combining magic-angle spinning (MAS) nuclear magnetic resonance (NMR) spectroscopy, tailored radio frequency (RF) irradiation schemes, and computational approaches. This allows us to overcome the "blind sphere" in paramagnetic proteins, and to observe and assign 1H, 13C, and 15N resonances for the ligands directly coordinating the metal center. We illustrate the method by determining the bond lengths in the structure of the CoII coordination sphere at the core of human superoxide dismutase 1 (SOD) with 0.7 pm precision. The coordination geometry of the resulting structure explains the nonreactive nature of the CoII/ZnII centers in these proteins, which allows them to play a purely structural role.
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Affiliation(s)
- Andrea Bertarello
- Université de Lyon, Centre de RMN à Très Hauts Champs, FRE 2034 CNRS/Université Claude Bernard Lyon 1/ENS Lyon, 5 rue de la Doua, Villeurbanne 69100, France.,École Polytechnique Fédérale de Lausanne (EPFL), Institut des Sciences et Ingénierie Chimiques, Lausanne CH-1015, Switzerland
| | - Ladislav Benda
- Université de Lyon, Centre de RMN à Très Hauts Champs, FRE 2034 CNRS/Université Claude Bernard Lyon 1/ENS Lyon, 5 rue de la Doua, Villeurbanne 69100, France
| | - Kevin J Sanders
- Université de Lyon, Centre de RMN à Très Hauts Champs, FRE 2034 CNRS/Université Claude Bernard Lyon 1/ENS Lyon, 5 rue de la Doua, Villeurbanne 69100, France
| | - Andrew J Pell
- Université de Lyon, Centre de RMN à Très Hauts Champs, FRE 2034 CNRS/Université Claude Bernard Lyon 1/ENS Lyon, 5 rue de la Doua, Villeurbanne 69100, France
| | - Michael J Knight
- Université de Lyon, Centre de RMN à Très Hauts Champs, FRE 2034 CNRS/Université Claude Bernard Lyon 1/ENS Lyon, 5 rue de la Doua, Villeurbanne 69100, France
| | - Vladimir Pelmenschikov
- Technische Universität Berlin, Institut für Chemie, Straße des 17 Juni 135, Berlin 10623, Germany
| | - Leonardo Gonnelli
- Department of Chemistry "Ugo Schiff" and Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, Sesto Fiorentino 50019, Italy
| | - Isabella C Felli
- Department of Chemistry "Ugo Schiff" and Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, Sesto Fiorentino 50019, Italy
| | - Martin Kaupp
- Technische Universität Berlin, Institut für Chemie, Straße des 17 Juni 135, Berlin 10623, Germany
| | - Lyndon Emsley
- École Polytechnique Fédérale de Lausanne (EPFL), Institut des Sciences et Ingénierie Chimiques, Lausanne CH-1015, Switzerland
| | - Roberta Pierattelli
- Department of Chemistry "Ugo Schiff" and Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, Sesto Fiorentino 50019, Italy
| | - Guido Pintacuda
- Université de Lyon, Centre de RMN à Très Hauts Champs, FRE 2034 CNRS/Université Claude Bernard Lyon 1/ENS Lyon, 5 rue de la Doua, Villeurbanne 69100, France
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8
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Abstract
We propose two broadband pulse schemes for 14N solid-state magic-angle-spinning (MAS) nuclear magnetic resonance (NMR) that achieves (i) complete population inversion and (ii) efficient excitation of the double-quantum spectrum using low-power single-sideband-selective pulses. We give a comprehensive theoretical description of both schemes using a common framework that is based on the jolting-frame formalism of Caravatti et al. [J. Magn. Reson. 55, 88 (1983)]. This formalism is used to determine for the first time that we can obtain complete population inversion of 14N under low-power conditions, which we do here using single-sideband-selective adiabatic pulses. It is then used to predict that double-quantum coherences can be excited using low-power single-sideband-selective pulses. We then proceed to design a new experimental scheme for double-quantum excitation. The final double-quantum excitation pulse scheme is easily incorporated into other NMR experiments, as demonstrated here for double quantum-single quantum 14N correlation spectroscopy, and 1H-14N dipolar heteronuclear multiple-quantum correlation experiments. These pulses and irradiation schemes are evaluated numerically using simulations on single crystals and full powders, as well as experimentally on ammonium oxalate ((NH4)2C2O4) at moderate MAS and glycine at ultra-fast MAS. The performance of these new NMR methods is found to be very high, with population inversion efficiencies of 100% and double-quantum excitation efficiencies of 30%-50%, which are hitherto unprecedented for the low radiofrequency field amplitudes, up to the spinning frequency, that are used here.
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Affiliation(s)
- Andrew J Pell
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
| | - Kevin J Sanders
- Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (CNRS, ENS Lyon, UCB Lyon 1), Université de Lyon, 69100 Villeurbanne, France
| | | | - Guido Pintacuda
- Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (CNRS, ENS Lyon, UCB Lyon 1), Université de Lyon, 69100 Villeurbanne, France
| | - Clare P Grey
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
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10
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Jardón-Álvarez D, Sanders KJ, Phyo P, Baltisberger JH, Grandinetti PJ. Cluster formation of network-modifier cations in cesium silicate glasses. J Chem Phys 2018. [DOI: 10.1063/1.5020986] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Daniel Jardón-Álvarez
- Department of Chemistry, Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, USA
| | - Kevin J. Sanders
- Institut des Sciences Analytiques (CNRS UMR 5280, ENS de Lyon, UCB Lyon 1), Université de Lyon, 5 Rue de la Doua, 69100 Villeurbanne, France
| | - Pyae Phyo
- Division of Natural Science, Mathematics, and Nursing, Berea College, Berea, Kentucky 40403, USA
| | - Jay H. Baltisberger
- Division of Natural Science, Mathematics, and Nursing, Berea College, Berea, Kentucky 40403, USA
| | - Philip J. Grandinetti
- Department of Chemistry, Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, USA
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11
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Daugaard I, Sanders KJ, Idica A, Vittayarukskul K, Hamdorf M, Krog JD, Chow R, Jury D, Hansen LL, Hager H, Lamy P, Choi CL, Agalliu D, Zisoulis DG, Pedersen IM. miR-151a induces partial EMT by regulating E-cadherin in NSCLC cells. Oncogenesis 2017; 6:e366. [PMID: 28759022 PMCID: PMC5541717 DOI: 10.1038/oncsis.2017.66] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2017] [Revised: 05/15/2017] [Accepted: 06/07/2017] [Indexed: 02/07/2023] Open
Abstract
miR-151a and its host gene, focal adhesion kinase, FAK, are located in a region of chromosome 8q that is frequently amplified in solid tumors, including lung cancer. Lung cancer is the leading cause of cancer deaths worldwide and metastasis remains the major challenge in battling lung cancer mortality. Here, we demonstrate that miR-151a is overexpressed in non-small cell lung cancer (NSCLC) patient specimens, as compared to healthy lung. In addition, miR-151a overexpression promotes proliferation, epithelial-to-mesenchymal transition (EMT) and induces tumor cell migration and invasion of NSCLC cells. Blocking miR-151a expression using anti-miR-151a approaches significantly reduced NCSLC cell proliferative and motility potential. Furthermore, we determined that miR-151a significantly regulates E-cadherin expression. Finally, functional rescue experiments determined that overexpression of E-cadherin in miR-151a NSCLC cell lines potently repressed miR-151a-induced partial EMT and cell migration of NSCLC cells. In conclusion, our findings suggest that miR-151a functions as an oncomiR in NSCLC by targeting E-cadherin mRNA and inducing proliferation, migration and partial EMT.
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Affiliation(s)
- I Daugaard
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA.,Department of Biomedicine, Aarhus University, Aarhus, Denmark
| | - K J Sanders
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - A Idica
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - K Vittayarukskul
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - M Hamdorf
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - J D Krog
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA.,Department of Biomedicine, Aarhus University, Aarhus, Denmark
| | - R Chow
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - D Jury
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - L L Hansen
- Department of Biomedicine, Aarhus University, Aarhus, Denmark
| | - H Hager
- Department of Pathology, Aarhus University Hospital, Aarhus, Denmark.,Department of Pathology, Vejle Hospital, Vejle, Denmark
| | - P Lamy
- Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark
| | - C L Choi
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - D Agalliu
- Departments of Neurology, Pathology and Cell Biology, Pharmacology, Columbia University Medical Center, New York, NY, USA
| | - D G Zisoulis
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
| | - I M Pedersen
- Department of Molecular Biology and Biochemistry, Francisco J. Ayala School of Biological Sciences, University of California, Irvine, CA, USA
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Burcher B, Sanders KJ, Benda L, Pintacuda G, Jeanneau E, Danopoulos AA, Braunstein P, Olivier-Bourbigou H, Breuil PAR. A Straightforward Access to Stable, 16 Valence-electron Phosphine-Stabilized Fe 0 Olefin Complexes and their Reactivity. Organometallics 2017; 36:605-613. [PMID: 31031510 DOI: 10.1021/acs.organomet.6b00803] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The use of the dialkene divinyltetramethyldisiloxane (dvtms) allows easy access to the reactive 16 valence-electron complexes [Fe0(L-L)(dvtms)], (L-L) = dppe (1,2-bis(diphenylphosphino)ethane), (1), dppp (1,2-bis(diisopropylphosphino)propane), (2), pyNMeP(iPr)2 (N-(diisopropylphosphino)-N-methylpyridin-2-amine), (4), dipe (1,2-bis(diisopropylphosphino)ethane), (5), and [Fe0(L)2(dvtms)], L = PMe3, (3), by a mild reductive route using AlEt2(OEt) as reducing agent. In contrast, by the same methodology, the 18 valence-electron complexes [Fe0(L-L)2(ethylene)], (L-L) = dppm (1,2-bis(diphenylphosphino)methane), 6, (L-L) = dppa (1,2-bis(diphenylphosphino)amine) 7 or (L-L)=dppe, 8, were obtained, which do not contain dvtms. In addition, a combined DFT and solid-state paramagnetic NMR methodology is introduced for the structure determination of 5. A comparative study of the reactivity of 1,2,4-6 and 8 with 3-hexyne highlights emerging mechanistic implications for C-C coupling reactions using these complexes as catalysts.
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Affiliation(s)
- Benjamin Burcher
- IFP Energies nouvelles, Rond-point de l'échangeur de Solaize, BP 3, 69360 Solaize, France
| | - Kevin J Sanders
- Institut des Sciences Analytiques, UMR 5280 CNRS, Université de Lyon, École Normale Supérieure de Lyon, 5 rue de la Doua, 69100 Villeurbanne, France
| | - Ladislav Benda
- Institut des Sciences Analytiques, UMR 5280 CNRS, Université de Lyon, École Normale Supérieure de Lyon, 5 rue de la Doua, 69100 Villeurbanne, France
| | - Guido Pintacuda
- Institut des Sciences Analytiques, UMR 5280 CNRS, Université de Lyon, École Normale Supérieure de Lyon, 5 rue de la Doua, 69100 Villeurbanne, France
| | - Erwann Jeanneau
- Centre de Diffractométrie Henri Longchambon, Site CLEA - Bât. ISA, 3ème étage, 5 rue de La Doua, 69100 Villeurbanne, France
| | - Andreas A Danopoulos
- Université de Strasbourg, CNRS, CHIMIE UMR 7177, Laboratoire de Chimie de Coordination, 4 rue Blaise Pascal, CS90032, 67081 Strasbourg, France
| | - Pierre Braunstein
- Université de Strasbourg, CNRS, CHIMIE UMR 7177, Laboratoire de Chimie de Coordination, 4 rue Blaise Pascal, CS90032, 67081 Strasbourg, France
| | | | - Pierre-Alain R Breuil
- IFP Energies nouvelles, Rond-point de l'échangeur de Solaize, BP 3, 69360 Solaize, France
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13
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Baltisberger JH, Florian P, Keeler EG, Phyo PA, Sanders KJ, Grandinetti PJ. Modifier cation effects on (29)Si nuclear shielding anisotropies in silicate glasses. J Magn Reson 2016; 268:95-106. [PMID: 27187210 DOI: 10.1016/j.jmr.2016.05.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2015] [Revised: 04/29/2016] [Accepted: 05/08/2016] [Indexed: 05/06/2023]
Abstract
We have examined variations in the (29)Si nuclear shielding tensor parameters of SiO4 tetrahedra in a series of seven alkali and alkaline earth silicate glass compositions, Cs2O·4.81 SiO2, Rb2O·3.96 SiO2, Rb2O·2.25 SiO2, K2O·4.48 SiO2, Na2O·4.74 SiO2, BaO·2.64 SiO2, and SrO·2.36 SiO2, using natural abundance (29)Si two-dimensional magic-angle flipping (MAF) experiments. Our analyses of these 2D spectra reveal a linear dependence of the (29)Si nuclear shielding anisotropy of Q((3)) sites on the Si-non-bridging oxygen bond length, which in turn depends on the cation potential and coordination of modifier cations to the non-bridging oxygen. We also demonstrate how a combination of Cu(2+) as a paramagnetic dopant combined with echo train acquisition can reduce the total experiment time of (29)Si 2D NMR measurements by two orders of magnitude, enabling higher throughput 2D NMR studies of glass structure.
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Affiliation(s)
- Jay H Baltisberger
- Division of Natural Science, Mathematics, and Nursing, Berea College, Berea, KY 40403, United States
| | - Pierre Florian
- CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France
| | - Eric G Keeler
- Department of Chemistry and Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, United States
| | - Pyae A Phyo
- Division of Natural Science, Mathematics, and Nursing, Berea College, Berea, KY 40403, United States
| | - Kevin J Sanders
- Institut des Sciences Analytiques (CNRS, ENS de Lyon, UCB Lyon 1), Université de Lyon, 5 rue de la Doua, 69100 Villeurbanne, France
| | - Philip J Grandinetti
- Department of Chemistry, The Ohio State University, 120 W. 18(th) Avenue, Columbus, OH 43210-1173, United States.
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Baltisberger JH, Walder BJ, Keeler EG, Kaseman DC, Sanders KJ, Grandinetti PJ. Communication: Phase incremented echo train acquisition in NMR spectroscopy. J Chem Phys 2012; 136:211104. [PMID: 22697523 DOI: 10.1063/1.4728105] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Affiliation(s)
- Jay H. Baltisberger
- Division of Natural Science, Mathematics, and Nursing, Berea College, Berea, Kentucky 40403, USA
| | - Brennan J. Walder
- Department of Chemistry, Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, USA
| | - Eric G. Keeler
- Department of Chemistry, Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, USA
| | - Derrick C. Kaseman
- Department of Chemistry, Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, USA
| | - Kevin J. Sanders
- Department of Chemistry, Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, USA
| | - Philip J. Grandinetti
- Department of Chemistry, Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, USA
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Davis MC, Kaseman DC, Parvani SM, Sanders KJ, Grandinetti PJ, Massiot D, Florian P. Q(n) Species Distribution in K2O·2SiO2 Glass by 29Si Magic Angle Flipping NMR. J Phys Chem A 2010; 114:5503-8. [DOI: 10.1021/jp100530m] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Michael C. Davis
- Department of Chemistry, The Ohio State University, 120 West 18th Avenue, Columbus, Ohio 43210-1173, CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France, and Universite d Orleans, Avenue du Parc Floral, BP 6749, 45067 Orleans Cedex 2, France
| | - Derrick C. Kaseman
- Department of Chemistry, The Ohio State University, 120 West 18th Avenue, Columbus, Ohio 43210-1173, CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France, and Universite d Orleans, Avenue du Parc Floral, BP 6749, 45067 Orleans Cedex 2, France
| | - Sahar M. Parvani
- Department of Chemistry, The Ohio State University, 120 West 18th Avenue, Columbus, Ohio 43210-1173, CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France, and Universite d Orleans, Avenue du Parc Floral, BP 6749, 45067 Orleans Cedex 2, France
| | - Kevin J. Sanders
- Department of Chemistry, The Ohio State University, 120 West 18th Avenue, Columbus, Ohio 43210-1173, CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France, and Universite d Orleans, Avenue du Parc Floral, BP 6749, 45067 Orleans Cedex 2, France
| | - Philip J. Grandinetti
- Department of Chemistry, The Ohio State University, 120 West 18th Avenue, Columbus, Ohio 43210-1173, CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France, and Universite d Orleans, Avenue du Parc Floral, BP 6749, 45067 Orleans Cedex 2, France
| | - Dominique Massiot
- Department of Chemistry, The Ohio State University, 120 West 18th Avenue, Columbus, Ohio 43210-1173, CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France, and Universite d Orleans, Avenue du Parc Floral, BP 6749, 45067 Orleans Cedex 2, France
| | - Pierre Florian
- Department of Chemistry, The Ohio State University, 120 West 18th Avenue, Columbus, Ohio 43210-1173, CNRS, UPR3079 CEMHTI, 1D Avenue de la Recherche Scientifique, 45071 Orléans Cedex 2, France, and Universite d Orleans, Avenue du Parc Floral, BP 6749, 45067 Orleans Cedex 2, France
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Dharmagunawardena B, Takwale A, Sanders KJ, Cannan S, Rodger A, Ilchyshyn A. Gas chromatography: an investigative tool in multiple allergies to essential oils. Contact Dermatitis 2002; 47:288-92. [PMID: 12534533 DOI: 10.1034/j.1600-0536.2002.470506.x] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Essential or fragrant oils are volatile odourous mixtures of organic chemical compounds that are widely used in aromatherapy and in the perfume industry. Because of their frequent use, allergy to essential oils is being increasingly recognized. We report 2 cases of multiple allergies to essential oils in professional aromatherapists. Gas chromatography/mass spectrometry was used to analyse the oils in order to identify a common allergen responsible for the contact dermatitis. In both the cases, alpha- and beta-pinene were found to be the most common constituent in the oils and thus appeared to be key allergens. alpha-pinene was confirmed as an allergen on repeat patch testing with pure alpha-pinene in both cases. 12 controls tested were negative for the same. Gas chromatography-mass spectrometry was found to be an extremely useful tool that could be utilized in investigating multiple allergies to essential oils.
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Affiliation(s)
- B Dharmagunawardena
- Department of Dermatology, University Hospitals Coventry and Warwickshire NHS Trust, UK.
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Abstract
An efficient small volume accurate dialysis system has been designed, built and tested for proflavine binding to DNA based upon the side by side design used in the Franz diffusion cell. In a typical experiment 3 cm3 of DNA solution is added to one side and 3 cm3 of ligand to the other with a dialysis membrane between the two sides of 1 cm in diameter, thereby minimizing the area of dialysis membrane that the solutions are in contact with.
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Affiliation(s)
- K J Sanders
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK
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Rodger A, Sanders KJ, Hannon MJ, Meistermann I, Parkinson A, Vidler DS, Haworth IS. DNA structure control by polycationic species: polyamine, cobalt ammines, and di-metallo transition metal chelates. Chirality 2000; 12:221-36. [PMID: 10790193 DOI: 10.1002/(sici)1520-636x(2000)12:4<221::aid-chir9>3.0.co;2-3] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Many polycationic species bind to DNA and induce structural changes. The work reported here is the first phase of a program whose long-term aim is to create a class of simple and inexpensive sequence-selective compounds that will enable enhanced DNA structure control for a wide range of applications. Three classes of molecule have been included in this work: the polyamine spermine (charge: 4(+)) and spermidine (charge: 3(+)) (which are known to induce a wide range of DNA conformational changes but whose binding modes are still not well understood); cobalt (III) amine transition metal complexes as potential polyamine mimics and [Fe(H(2)O)(6)](3+); and the first member of a new class of di-metallo tris-chelated cylinders of helical structure (charge 4(+)). Temperature-dependent absorption, circular dichroism, linear dichroism, gel electrophoresis, and molecular modeling data are presented. The cobalt amines prove to be effective polyamine mimics, although their binding appears to be restricted to backbone and major groove. All the ligands stabilize the DNA, but the 4(+) di-iron tris-chelate does so comparatively weakly and seems to have a preference for single-stranded DNA. All the molecules studied bend the DNA, with the di-iron tris-chelate having a particularly dramatic effect even at very low drug load.
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Affiliation(s)
- A Rodger
- Department of Chemistry, University of Warwick, Coventry, UK.
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Abstract
A specialized behavior, oviposition, is produced by the eighth and ninth abdominal segments of female grasshoppers. To begin to understand how these segments produce the behavior, which is not displayed by males or pregenital regions of the abdomen in females, the structure and function of efferent neurons in abdominal ganglia of both sexes were examined. In females, the eighth and ninth segments are specialized differently for oviposition: 20 ovipositor motor neurons were found in the eighth segment, and 26 were found in the ninth segment. Males had fewer motor neurons in their eighth segment, but the same number in the ninth segment, which is the only genital segment in males. However, the axons of several of the ninth segmental male motor neurons traveled to the periphery in the genital nerve, which is only found in males. In both sexes, pregenital ganglia had the most motor neurons, but these neurons, for the most part, had morphologies that strongly resembled those of genital segments. Efferent modulatory neuron numbers were not sexually dimorphic in the segments examined, except that males had a greater number in their ninth segment. Experimental methods that activate oviposition were found to also activate a rhythmical motor pattern in pregenital abdominal segments of both sexes. In females, the pattern was phase-coupled to oviposition, but persisted after the connections with the terminal abdominal ganglion were severed. The preponderance of similarities among efferent neurons and elicited motor activity suggests a common pattern of neural circuitry in the behaviorally diverse abdominal segments of grasshoppers.
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Affiliation(s)
- K J Thompson
- Department of Biology, Agnes Scott College, Decatur, Georgia 30030, USA.
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Abstract
The binding of 9-hydroxyellipticine to calf thymus DNA, poly[d(A-T)]2, and poly[d(G-C)]2 has been studied in detail by means of CD, linear dichroism, resonance light scattering, and molecular dynamics. The transition moment polarizations of 9-hydroxyellipticine were determined in polyvinyl alcohol stretched film. Spectroscopic solution studies of the DNA/drug complex are combined with theoretical CD calculations using the final 50 ps of a series of molecular dynamics simulations as input. The spectroscopic data shows 9-hydroxyellipticine to adopt two main binding modes, one intercalative and the other a stacked binding mode involving the formation of drug oligomers in the DNA major groove. Analysis of the intercalated binding mode in poly[d(A-T)]2 suggests the 9-hydroxyellipticine hydroxyl group lies in the minor groove and hydrogen bonds to water with the pyridine ring protruding into the major groove. The stacked binding mode was examined using resonance light scattering and it was concluded that the drug was forming small oligomer stacks rather than extended aggregates. Reduced linear dichroism measurements suggested a binding geometry that precluded a minor groove binding mode where the plane of the drug makes a 45 degrees angle with the plane of the bases. Thus it was concluded that the drug stacks in the major groove. No obvious differences in the mode of binding of 9-hydroxyellipticine were observed between different DNA sequences; however, the stacked binding mode appeared to be more favorable for calf thymus DNA and poly[d(G-C)]2 than for poly[d(A-T)]2, an observation that could be explained by the slightly greater steric hindrance of the poly[d(A-T)]2 major groove. A strong concentration dependence was observed for the two binding modes where intercalation is favored at very low drug load, with stacking interactions becoming more prominent as the drug concentration is increased. Even at DNA: drug mixing ratios of 70:1 the stacked binding mode was still important for GC-rich DNAs.
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Affiliation(s)
- M A Ismail
- Department of Chemistry, University of Warwick, Coventry, UK
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Abstract
The synthesis, solution conformation, and interaction with DNA of three 8-residue peptides structurally related to the heptad repeat unit found at the C-terminus of RNA polymerase II are reported. Peptides QQ, XQ, and PQ are derived from the parent sequence YSPTSPSY (peptide YY), which was reported to bind to DNA by bisintercalation [M. Suzuki (1990) Nature, Vol. 344, pp. 562-565], and contain either a 2-quinolyl (Q), 2-quinoxolyl (X), or 5-phenanthrolyl (P) group in place of the aromatic side chains of the N- and C-terminal tyrosine residues present in the parent sequence. The combined results of linear dichroism and induced CD measurements of peptides QQ, XQ, and PQ with calf thymus DNA are consistent with weak binding of the peptides to DNA in a preferred orientation in which the chromophores are intercalated. Small increases in the melting temperatures of poly[d(A-T)2] are also consistent with the peptides interacting with DNA. While enzymatic footprinting with DNase I showed no protection from cleavage by the enzyme, chemical footprinting with fotemustine showed that the peptides modify the reactivity of the major groove, presumably via minor groove binding. Peptide QQ inhibited fotemustine alkylation significantly more than either XQ or PQ, and slightly more than YY. In aqueous solution, nmr experiments on QQ, XQ, and PQ show a significant population of a conformation in which Ser2-Pro3-Thr4-Ser5 form both type I and type II beta-turn conformations in equilibrium with open chain conformations. Nuclear magnetic resonance titration experiments of PQ with (GCGTACGC)2 showed small changes in chemical shifts, consistent with the formation of a weak nonspecific complex. Analogous experiments, using peptides QQ and XQ with (GCGTACGC)2, and peptide YY with (CGTACG)2, showed no evidence for the interaction of the peptides with these oligonucleotides. These results show that peptides of general structure XSPTSPSZ are weak nonspecific DNA binders that differ significantly from previously characterized S(T)PXX DNA-binding motifs that are generally AT-selective minor groove binders.
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Affiliation(s)
- M M Harding
- School of Chemistry, University of Sydney, NSW, Australia
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Affiliation(s)
- K J Sanders
- Maxillofacial Unit, Withington Hospital, West Didsbury, Manchester, UK
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Smith MJ, Carayon P, Sanders KJ, Lim SY, Legrande D. Employee stress and health complaints in jobs with and without electronic performance monitoring. Appl Ergon 1992; 23:17-27. [PMID: 15676845 DOI: 10.1016/0003-6870(92)90006-h] [Citation(s) in RCA: 62] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Current applications of electronic performance monitoring based on job design theories that consider worker performance rather than stress issues are likely to generate unsatisfying and stressful jobs (Smith et al, 1986). This study examines critical job design elements that could influence worker stress responses in an electronic monitoring context. A questionnaire survey of employees in telecommunications companies representative of each region in the United States examined job stress in directory assistance, service representative and clerical jobs with specific emphasis on the influence of electronic monitoring of job performance, satisfaction and employee health. Useable surveys were received from 745 employees representing seven operating companies and AT & T; a response rate of about 25%. The results of this survey indicated that employees who had their performance electronically monitored perceived their working conditions as more stressful, and reported higher levels of job boredom, psychological tension, anxiety, depression, anger, health complaints and fatigue. It is postulated that these effects may be related to changes in job design due to electronic performance monitoring.
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Affiliation(s)
- M J Smith
- Department of Industrial Engineering, University of Wisconsin-Madison, 1513 University Avenue, Madison, WI 53706, USA
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Gardner LI, Mitter N, Coplan J, Kalinowski DP, Sanders KJ. Isochromosome 9q in an infant exposed to ethanol prenatally. N Engl J Med 1985; 312:1521. [PMID: 4039411] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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Mohla S, Ampy FR, Sanders KJ, Criss WE. Hormonal regulation of the metabolism of carcinogens in renal tissue of BALB/c mice. Cancer Res 1981; 41:3821-3. [PMID: 7260955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
The role of androgens in the regulation of carcinogen metabolism in the renal tissue of BALB/c mice was investigated. Kidney microsomal enzyme preparations from mature and immature animals were used in mutagenic studies using the Ames test. Androgen receptors (cytosolic and nuclear) were also evaluated. The results show that the microsomal enzymes from mature males had greater potential to biotransform dimethylnitrosamine than did the microsomal enzymes from mature females or immature animals. Testosterone treatment of mature females or immature animals resulted in a significant increase in the mutagenic ability of their renal microsomal enzymes. Androgen receptors were detected in kidney cytosols of mature and immature animals (both males and females); however, nuclear androgen receptors were detected only in the mature males. Testosterone treatment resulted in a significant accumulation of nuclear androgen receptors in the kidneys of mature females and immature animals. The relationships among mutagenic activity, androgen receptors, the levels of N-demethylase (an enzyme responsible for conversion of dimethylnitrosamine to its active metabolite), dietary fat, and the carcinogen metabolism are discussed.
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