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Thorne LH. Albatrosses orient toward infrasound while foraging. Proc Natl Acad Sci U S A 2023; 120:e2314980120. [PMID: 37812705 PMCID: PMC10589637 DOI: 10.1073/pnas.2314980120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/11/2023] Open
Affiliation(s)
- Lesley H. Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY11794-5000
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2
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Welch H, Savoca MS, Brodie S, Jacox MG, Muhling BA, Clay TA, Cimino MA, Benson SR, Block BA, Conners MG, Costa DP, Jordan FD, Leising AW, Mikles CS, Palacios DM, Shaffer SA, Thorne LH, Watson JT, Holser RR, Dewitt L, Bograd SJ, Hazen EL. Impacts of marine heatwaves on top predator distributions are variable but predictable. Nat Commun 2023; 14:5188. [PMID: 37669922 PMCID: PMC10480173 DOI: 10.1038/s41467-023-40849-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Accepted: 08/11/2023] [Indexed: 09/07/2023] Open
Abstract
Marine heatwaves cause widespread environmental, biological, and socio-economic impacts, placing them at the forefront of 21st-century management challenges. However, heatwaves vary in intensity and evolution, and a paucity of information on how this variability impacts marine species limits our ability to proactively manage for these extreme events. Here, we model the effects of four recent heatwaves (2014, 2015, 2019, 2020) in the Northeastern Pacific on the distributions of 14 top predator species of ecological, cultural, and commercial importance. Predicted responses were highly variable across species and heatwaves, ranging from near total loss of habitat to a two-fold increase. Heatwaves rapidly altered political bio-geographies, with up to 10% of predicted habitat across all species shifting jurisdictions during individual heatwaves. The variability in predicted responses across species and heatwaves portends the need for novel management solutions that can rapidly respond to extreme climate events. As proof-of-concept, we developed an operational dynamic ocean management tool that predicts predator distributions and responses to extreme conditions in near real-time.
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Affiliation(s)
- Heather Welch
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA.
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA.
| | - Matthew S Savoca
- Hopkins Marine Station, Stanford University, Pacific Grove, CA, USA
| | - Stephanie Brodie
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
| | - Michael G Jacox
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
- NOAA, Physical Sciences Laboratory, Boulder, CO, USA
| | - Barbara A Muhling
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
- NOAA Southwest Fisheries Science Center, Fisheries Resources Division, San Diego, CA, USA
| | - Thomas A Clay
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
- People and Nature, Environmental Defense Fund, Monterey, CA, USA
| | - Megan A Cimino
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
| | - Scott R Benson
- NOAA, Southwest Fisheries Science Center, Marine Mammal and Turtle Division, Moss Landing, CA, USA
- Moss Landing Marine Laboratories, San Jose State University, Moss Landing, CA, USA
| | - Barbara A Block
- Hopkins Marine Station, Stanford University, Pacific Grove, CA, USA
| | - Melinda G Conners
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA
| | - Daniel P Costa
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
- Department of Ecology and Evolutionary Biology, UC Santa Cruz, Santa Cruz, CA, USA
| | - Fredrick D Jordan
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA
| | - Andrew W Leising
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
| | - Chloe S Mikles
- Hopkins Marine Station, Stanford University, Pacific Grove, CA, USA
| | - Daniel M Palacios
- Marine Mammal Institute, Oregon State University, Newport, OR, USA
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, Newport, OR, USA
| | - Scott A Shaffer
- Department of Biological Sciences, San Jose State University, San Jose, CA, USA
| | - Lesley H Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA
| | - Jordan T Watson
- NOAA, Alaska Fisheries Science Center, Auke Bay Laboratory, Juneau, AK, USA
- Pacific Islands Ocean Observing System, University of Hawai'i Mānoa, Honolulu, HI, USA
| | - Rachel R Holser
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
| | - Lynn Dewitt
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
| | - Steven J Bograd
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
| | - Elliott L Hazen
- NOAA, Southwest Fisheries Science Center, Environmental Research Division, Monterey, CA, USA
- Institute of Marine Science, UC Santa Cruz, Santa Cruz, CA, USA
- Hopkins Marine Station, Stanford University, Pacific Grove, CA, USA
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3
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Jordan FD, Shaffer SA, Conners MG, Stepanuk JEF, Gilmour ME, Clatterbuck CA, Hazen EL, Palacios DM, Tremblay Y, Antolos M, Foley DG, Bograd SJ, Costa DP, Thorne LH. Divergent post-breeding spatial habitat use of Laysan and black-footed albatross. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.1028317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Understanding the at-sea movements of wide-ranging seabird species throughout their annual cycle is essential for their conservation and management. Habitat use and resource partitioning of Laysan (Phoebastria immutabilis) and black-footed (Phoebastria nigripes) albatross are well-described during the breeding period but are less understood during the post-breeding period, which represents ~40% of their annual cycle. Resource partitioning may be reduced during post-breeding, when birds are not constrained to return to the nest site regularly and can disperse to reduce competitive pressure. We assessed the degree of spatial segregation in the post-breeding distributions of Laysan (n = 82) and black-footed albatrosses (n = 61) using geolocator tags between 2008 and 2012 from two large breeding colonies in the Northwestern Hawaiian Islands, Midway Atoll, and Tern Island. We characterized the species-and colony-specific foraging and focal distributions (represented by the 95 and 50th density contours, respectively) and quantified segregation in at-sea habitat use between species and colonies. Laysan and black-footed albatross showed consistent and significant at-sea segregation in focal areas across colonies, indicating that resource partitioning persists during post-breeding. Within breeding colonies, segregation of foraging areas between the two species was more evident for birds breeding at Tern Island. Spatial segregation decreased as the post-breeding season progressed, when spatial distributions of both species became more dispersed. In contrast to studies conducted on breeding Laysan and black-footed albatross, we found that sea surface temperature distinguished post-breeding habitats of black-footed albatrosses between colonies, with black-footed albatrosses from Midway Atoll occurring in cooler waters (3.6°C cooler on average). Our results reveal marked at-sea segregation between Laysan and black-footed albatross breeding at two colonies during a critical but understudied phase in their annual cycle. The observed variation in species-environment relationships underscores the importance of sampling multiple colonies and temporal periods to more thoroughly understand the spatial distributions of pelagic seabirds.
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Thorne LH, Heywood EI, Hirtle NO. Rapid restructuring of the odontocete community in an ocean warming hotspot. Glob Chang Biol 2022; 28:6524-6540. [PMID: 36054792 PMCID: PMC9804436 DOI: 10.1111/gcb.16382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Revised: 06/24/2022] [Accepted: 07/11/2022] [Indexed: 06/15/2023]
Abstract
Cetaceans are important consumers in marine ecosystems, but few studies have quantified their climate responses. The rapid, directional warming occurring in the Northeast United States (NEUS) provides a unique opportunity to assess climate impacts on cetaceans. We used stranding data to examine changes to the distribution and relative abundance of odontocetes from 1996 to 2020 in both the NEUS and the Southeast United States (SEUS), which is not warming. We conducted simulations to determine the number of stranding events needed to detect a distributional shift for each species given the speed of the shift and the spatial variability in strandings. We compared observed shifts to climate velocity. Smaller sample sizes were needed to detect more rapid poleward shifts, particularly for species with low spatial variability. Poleward shifts were observed in all species with sufficient sample sizes, and shifts were faster than predicted by climate velocity. For species whose trailing edge of distribution occurred in the NEUS, the center of distribution approached the northern limit of the NEUS and relative abundance declined through time, suggesting shifts north out of US waters. The relative abundance of warm water species in the stranding record increased significantly in the NEUS while that of cool water species declined significantly as their distributions shifted north out of the NEUS. Changes in the odontocete community were less apparent in the SEUS, highlighting the importance of regional warming. Observed poleward shifts and changes in species composition suggest a reorganization of the odontocete community in the NEUS in response to rapid warming. We suggest that strandings provide a key dataset for understanding climate impacts on cetaceans given limitations of survey effort and modeling approaches for predicting distributions under rapidly changing conditions. Our findings portend marked changes to the distribution of highly mobile consumer species across international boundaries under continued warming.
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Affiliation(s)
- Lesley H. Thorne
- School of Marine and Atmospheric SciencesStony Brook UniversityStony BrookNew YorkUSA
| | - Eleanor I. Heywood
- School of Marine and Atmospheric SciencesStony Brook UniversityStony BrookNew YorkUSA
| | - Nathan O. Hirtle
- School of Marine and Atmospheric SciencesStony Brook UniversityStony BrookNew YorkUSA
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Lato KA, Stepanuk JEF, Heywood EI, Conners MG, Thorne LH. Assessing the accuracy of altitude estimates in avian biologging devices. PLoS One 2022; 17:e0276098. [PMID: 36288345 PMCID: PMC9605028 DOI: 10.1371/journal.pone.0276098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Accepted: 09/29/2022] [Indexed: 11/06/2022] Open
Abstract
Advances in animal biologging technologies have greatly improved our understanding of animal movement and distribution, particularly for highly mobile species that travel across vast spatial scales. Assessing the accuracy of these devices is critical to drawing appropriate conclusions from resulting data. While understanding the vertical dimension of movements is key to assessing habitat use and behavior in aerial species, previous studies have primarily focused on assessing the accuracy of biologging devices in the horizontal plane with far less emphasis placed on the vertical plane. Here we use an Unaccompanied Aircraft System (UAS) outfitted with a laser altimeter to broadly assess the accuracy of altitude estimates of three commonly used avian biologging devices during three field trials: stationary flights, continuous horizontal movements, and continuous vertical movements. We found that the device measuring barometric pressure consistently provided the most accurate altitude estimates (mean error of 1.57m) and effectively captured finer-scale vertical movements. Conversely, devices that relied upon GPS triangulation to estimate altitude typically overestimated altitude during horizontal movements (mean error of 6.5m or 40.96m) and underestimated amplitude during vertical movements. Additional factors thought to impact device accuracy, including Horizontal- and Position- Dilution of Precision and the time intervals over which altitude estimates were assessed, did not have notable effects on results in our analyses. Reported accuracy values for different devices may be useful in future studies of aerial species’ behavior relative to vertical obstacles such as wind turbines. Our results suggest that studies seeking to quantify altitude of aerial species should prioritize pressure-based measurements, which provide sufficient resolution for examining broad and some fine-scale behaviors. This work highlights the importance of considering and accounting for error in altitude measurements during avian studies relative to the scale of data needed to address particular scientific questions.
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Affiliation(s)
- Kimberly A. Lato
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, New York, United States of America
- * E-mail:
| | - Julia E. F. Stepanuk
- Department of Ecology and Evolution, Stony Brook University, Stony Brook, New York, United States of America
| | - Eleanor I. Heywood
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, New York, United States of America
| | - Melinda G. Conners
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, New York, United States of America
| | - Lesley H. Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, New York, United States of America
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Hirtle NO, Stepanuk JEF, Heywood EI, Christiansen F, Thorne LH. Integrating
3D
models with morphometric measurements to improve volumetric estimates in marine mammals. Methods Ecol Evol 2022. [DOI: 10.1111/2041-210x.13962] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Nathan O. Hirtle
- Stony Brook University School of Marine and Atmospheric Sciences Stony Brook NY USA
| | | | - Eleanor I. Heywood
- Stony Brook University School of Marine and Atmospheric Sciences Stony Brook NY USA
| | - Fredrik Christiansen
- Aarhus Institute of Advanced Studies Aarhus C Denmark
- Zoophysiology, Department of Biology Aarhus University Aarhus C Denmark
| | - Lesley H. Thorne
- Stony Brook University School of Marine and Atmospheric Sciences Stony Brook NY USA
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Lato KA, Madigan DJ, Veit RR, Thorne LH. Closely related gull species show contrasting foraging strategies in an urban environment. Sci Rep 2021; 11:23619. [PMID: 34880306 PMCID: PMC8655058 DOI: 10.1038/s41598-021-02821-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Accepted: 11/15/2021] [Indexed: 11/18/2022] Open
Abstract
The expansion of urban landscapes has both negative and positive effects on wildlife. Understanding how different species respond to urbanization is key to assessing how urban landscapes influence regional wildlife behavior and ecosystem structure. Gulls are often described as strong urban adapters, but few studies have explored species-specific differences in habitat use. Here, we use GPS tracking in conjunction with stable isotope analysis (SIA) to quantify the habitat use and trophic ecology of great black-backed gulls (Larus marinus) and herring gulls (L. argentatus) in an urbanized area. Non-Metric Multidimensional Scaling (NMDS) of foraging locations revealed significant differences in the habitat use between species. Great black-backed gulls foraged primarily in marine habitats and herring gulls foraged primarily in specific urban habitats (e.g., landfills, dumpsters) and showed higher site fidelity in terms of the proportion of foraging sites revisited. Further, great black-backed gulls had significantly higher δ15N and δ13C than herring gulls, reflecting the use of marine, rather than urban, food sources. This study highlights the variability in urban habitat utilization among closely related species, assesses stable isotope signatures of urban diets in wild birds, and discusses ecological implications of the relative contribution of urban and marine foraging.
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Affiliation(s)
- K A Lato
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA.
| | - D J Madigan
- Department of Integrative Biology, University of Windsor, Windsor, ON, Canada
| | - R R Veit
- Department of Biology, College of Staten Island (CSI), CUNY, Staten Island, NY, USA
| | - L H Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA
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Thorne LH, Nye JA. Trait-mediated shifts and climate velocity decouple an endothermic marine predator and its ectothermic prey. Sci Rep 2021; 11:18507. [PMID: 34531442 PMCID: PMC8445949 DOI: 10.1038/s41598-021-97318-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Accepted: 08/19/2021] [Indexed: 12/02/2022] Open
Abstract
Climate change is redistributing biodiversity globally and distributional shifts have been found to follow local climate velocities. It is largely assumed that marine endotherms such as cetaceans might shift more slowly than ectotherms in response to warming and would primarily follow changes in prey, but distributional shifts in cetaceans are difficult to quantify. Here we use data from fisheries bycatch and strandings to examine changes in the distribution of long-finned pilot whales (Globicephala melas), and assess shifts in pilot whales and their prey relative to climate velocity in a rapidly warming region of the Northwest Atlantic. We found a poleward shift in pilot whale distribution that exceeded climate velocity and occurred at more than three times the rate of fish and invertebrate prey species. Fish and invertebrates shifted at rates equal to or slower than expected based on climate velocity, with more slowly shifting species moving to deeper waters. We suggest that traits such as mobility, diet specialization, and thermoregulatory strategy are central to understanding and anticipating range shifts. Our findings highlight the potential for trait-mediated climate shifts to decouple relationships between endothermic cetaceans and their ectothermic prey, which has important implications for marine food web dynamics and ecosystem stability.
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Affiliation(s)
- L H Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, 11794-5000, USA.
| | - J A Nye
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, 11794-5000, USA.,Institute of Marine Sciences, University of North Carolina Chapel Hill, Chapel Hill, NC, USA
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Lato KA, Thorne LH, Fuirst M, Brownawell BJ. Microplastic abundance in gull nests in relation to urbanization. Mar Pollut Bull 2021; 164:112058. [PMID: 33515834 DOI: 10.1016/j.marpolbul.2021.112058] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 01/02/2021] [Accepted: 01/06/2021] [Indexed: 05/12/2023]
Abstract
Human activity and urbanization are having profound effects on natural landscapes and ecosystems. The presence and persistence of human-made materials such as microplastics can have major impacts on the health of organisms in both marine and terrestrial environments. We quantified microplastics in herring gull (Larus argentatus) and great black-backed gull (Larus marinus) nests at three colonies in the northeast United States that varied in their degree of urbanization: Jamaica Bay (JB) in New York City, Youngs Island (YI) on Long Island, New York, and Tuckernuck Island (TN) in Massachusetts. Nests in urban colonies contained a higher proportion of microplastics than those in the more remote colony. Our results link urbanization with microplastic accumulation in coastal environments and suggest that assessing microplastics in seabird nests could provide a means of evaluating microplastics encountered by seabirds and other coastal marine animals.
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Affiliation(s)
- K A Lato
- Stony Brook University, School Marine and Atmospheric Sciences, 100 Nicholls Rd, Stony Brook, NY 11794, USA.
| | - L H Thorne
- Stony Brook University, School Marine and Atmospheric Sciences, 100 Nicholls Rd, Stony Brook, NY 11794, USA
| | - M Fuirst
- Stony Brook University, School Marine and Atmospheric Sciences, 100 Nicholls Rd, Stony Brook, NY 11794, USA
| | - B J Brownawell
- Stony Brook University, School Marine and Atmospheric Sciences, 100 Nicholls Rd, Stony Brook, NY 11794, USA
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Conners MG, Michelot T, Heywood EI, Orben RA, Phillips RA, Vyssotski AL, Shaffer SA, Thorne LH. Hidden Markov models identify major movement modes in accelerometer and magnetometer data from four albatross species. Mov Ecol 2021; 9:7. [PMID: 33618773 PMCID: PMC7901071 DOI: 10.1186/s40462-021-00243-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Accepted: 02/03/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND Inertial measurement units (IMUs) with high-resolution sensors such as accelerometers are now used extensively to study fine-scale behavior in a wide range of marine and terrestrial animals. Robust and practical methods are required for the computationally-demanding analysis of the resulting large datasets, particularly for automating classification routines that construct behavioral time series and time-activity budgets. Magnetometers are used increasingly to study behavior, but it is not clear how these sensors contribute to the accuracy of behavioral classification methods. Development of effective classification methodology is key to understanding energetic and life-history implications of foraging and other behaviors. METHODS We deployed accelerometers and magnetometers on four species of free-ranging albatrosses and evaluated the ability of unsupervised hidden Markov models (HMMs) to identify three major modalities in their behavior: 'flapping flight', 'soaring flight', and 'on-water'. The relative contribution of each sensor to classification accuracy was measured by comparing HMM-inferred states with expert classifications identified from stereotypic patterns observed in sensor data. RESULTS HMMs provided a flexible and easily interpretable means of classifying behavior from sensor data. Model accuracy was high overall (92%), but varied across behavioral states (87.6, 93.1 and 91.7% for 'flapping flight', 'soaring flight' and 'on-water', respectively). Models built on accelerometer data alone were as accurate as those that also included magnetometer data; however, the latter were useful for investigating slow and periodic behaviors such as dynamic soaring at a fine scale. CONCLUSIONS The use of IMUs in behavioral studies produces large data sets, necessitating the development of computationally-efficient methods to automate behavioral classification in order to synthesize and interpret underlying patterns. HMMs provide an accessible and robust framework for analyzing complex IMU datasets and comparing behavioral variation among taxa across habitats, time and space.
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Affiliation(s)
- Melinda G Conners
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, 11794, USA.
| | - Théo Michelot
- Centre for Research into Ecological and Environmental Modelling, University of St Andrews, St Andrews, KY169LZ, UK
| | - Eleanor I Heywood
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, 11794, USA
| | - Rachael A Orben
- Department of Fisheries and Wildlife, Oregon State University, Hatfield Marine Science Center, 2030 SE Marine Science Dr., Newport, OR, 97365, USA
| | - Richard A Phillips
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK
| | - Alexei L Vyssotski
- Institute of Neuroinformatics, University of Zurich and Swiss Federal Institute of Technology (ETH), 8057, Zurich, Switzerland
| | - Scott A Shaffer
- Department of Biological Sciences, San Jose State University, San Jose, CA, 95192-0100, USA
| | - Lesley H Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, 11794, USA
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Thorne LH, Baird RW, Webster DL, Stepanuk JE, Read AJ. Front Cover. DIVERS DISTRIB 2019. [DOI: 10.1111/ddi.12944] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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Thorne LH, Baird RW, Webster DL, Stepanuk JE, Read AJ. Predicting fisheries bycatch: A case study and field test for pilot whales in a pelagic longline fishery. DIVERS DISTRIB 2019. [DOI: 10.1111/ddi.12912] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Affiliation(s)
- Lesley H. Thorne
- School of Marine and Atmospheric Sciences Stony Brook University Stony Brook New York
| | | | | | - Julia E. Stepanuk
- School of Marine and Atmospheric Sciences Stony Brook University Stony Brook New York
| | - Andrew J. Read
- Division of Marine Science and Conservation, Nicholas School of the Environment Duke University Beaufort North Carolina
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Fuirst M, Veit RR, Hahn M, Dheilly N, Thorne LH. Effects of urbanization on the foraging ecology and microbiota of the generalist seabird Larus argentatus. PLoS One 2018; 13:e0209200. [PMID: 30562368 PMCID: PMC6298667 DOI: 10.1371/journal.pone.0209200] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Accepted: 12/01/2018] [Indexed: 01/22/2023] Open
Abstract
Larus gull species have proven adaptable to urbanization and due to their generalist feeding behaviors, they provide useful opportunities to study how urban environments impact foraging behavior and host-associated microbiota. We evaluated how urbanization influenced the foraging behavior and microbiome characteristics of breeding herring gulls (Larus argentatus) at three different colonies on the east coast of the United States. Study colonies represented high, medium and low degrees of urbanization, respectively. At all colonies, gulls frequently foraged at landfills and in other urban environments, but both the use of urban environments and gull foraging metrics differed with the degree of urbanization. Gulls at the more urban colonies used urban environments more frequently, showed higher rates of site fidelity and took shorter trips. Gulls at less urban colonies used a greater diversity of habitat types and foraged offshore. We observed high microbial diversity at all colonies, though microbial diversity was highest at the least urban colony where gulls used a wider variety of foraging habitats. This suggests that gulls may acquire a wider range of bacteria when visiting a higher variety of foraging sites. Our findings highlight the influence of urban habitats on gull movements and microbiome composition and diversity during the breeding season and represent the first application of amplicon sequence variants, an objective and repeatable method of bacterial classification, to study the microbiota of a seabird species.
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Affiliation(s)
- Matthew Fuirst
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, United States of America
| | - Richard R. Veit
- Department of Biology, College of Staten Island (CSI) CUNY, Staten Island, NY, United States of America
| | - Megan Hahn
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, United States of America
| | - Nolwenn Dheilly
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, United States of America
| | - Lesley H. Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, United States of America
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Thorne LH, Conners MG, Hazen EL, Bograd SJ, Antolos M, Costa DP, Shaffer SA. Effects of El Niño-driven changes in wind patterns on North Pacific albatrosses. J R Soc Interface 2017; 13:rsif.2016.0196. [PMID: 27278360 DOI: 10.1098/rsif.2016.0196] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2016] [Accepted: 05/16/2016] [Indexed: 11/12/2022] Open
Abstract
Changes to patterns of wind and ocean currents are tightly linked to climate change and have important implications for cost of travel and energy budgets in marine vertebrates. We evaluated how El Niño-Southern Oscillation (ENSO)-driven wind patterns affected breeding Laysan and black-footed albatross across a decade of study. Owing to latitudinal variation in wind patterns, wind speed differed between habitat used during incubation and brooding; during La Niña conditions, wind speeds were lower in incubating Laysan (though not black-footed) albatross habitat, but higher in habitats used by brooding albatrosses. Incubating Laysan albatrosses benefited from increased wind speeds during El Niño conditions, showing increased travel speeds and mass gained during foraging trips. However, brooding albatrosses did not benefit from stronger winds during La Niña conditions, instead experiencing stronger cumulative headwinds and a smaller proportion of trips in tailwinds. Increased travel costs during brooding may contribute to the lower reproductive success observed in La Niña conditions. Furthermore, benefits of stronger winds in incubating habitat may explain the higher reproductive success of Laysan albatross during El Niño conditions. Our findings highlight the importance of considering habitat accessibility and cost of travel when evaluating the impacts of climate-driven habitat change on marine predators.
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Affiliation(s)
- L H Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY 11790, USA
| | - M G Conners
- Ocean Sciences Department, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060, USA Center for the Science of Animal Care and Welfare, Chicago Zoological Society, 3300 Golf Road, Brookfield, IL 60513, USA
| | - E L Hazen
- Department of Ecology and Evolutionary Biology, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060, USA Environmental Research Division, Southwest Fisheries Science Center, NOAA Fisheries, 99 Pacific Street, Suite 255A, Monterey, CA 93940, USA
| | - S J Bograd
- Institute of Marine Sciences, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060, USA Environmental Research Division, Southwest Fisheries Science Center, NOAA Fisheries, 99 Pacific Street, Suite 255A, Monterey, CA 93940, USA
| | - M Antolos
- Department of Ecology and Evolutionary Biology, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060, USA Department of Fisheries and Wildlife, Oregon State University, 104 Nash Hall, Corvallis, OR 97331-3803, USA
| | - D P Costa
- Department of Ecology and Evolutionary Biology, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060, USA
| | - S A Shaffer
- Institute of Marine Sciences, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060, USA Department of Biological Sciences, San José State University, One Washington Square, San Jose, CA 95192, USA
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Lynch HJ, Foley CM, Lynch MA, Thorne LH. Response to Van Norman. Bioscience 2017. [DOI: 10.1093/biosci/bix109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Foley CM, Lynch MA, Thorne LH, Lynch HJ. Listing Foreign Species under the Endangered Species Act: A Primer for Conservation Biologists. Bioscience 2017. [DOI: 10.1093/biosci/bix027] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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Thorne LH, Hazen EL, Bograd SJ, Foley DG, Conners MG, Kappes MA, Kim HM, Costa DP, Tremblay Y, Shaffer SA. Foraging behavior links climate variability and reproduction in North Pacific albatrosses. Mov Ecol 2015; 3:27. [PMID: 26430513 PMCID: PMC4590278 DOI: 10.1186/s40462-015-0050-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/02/2015] [Accepted: 09/01/2015] [Indexed: 06/05/2023]
Abstract
BACKGROUND Climate-driven environmental change in the North Pacific has been well documented, with marked effects on the habitat and foraging behavior of marine predators. However, the mechanistic linkages connecting climate-driven changes in behavior to predator populations are not well understood. We evaluated the effects of climate-driven environmental variability on the reproductive success and foraging behavior of Laysan and Black-footed albatrosses breeding in the Northwest Hawaiian Islands during both brooding and incubating periods. We assessed foraging trip metrics and reproductive success using data collected from 2002-2012 and 1981-2012, respectively, relative to variability in the location of the Transition Zone Chlorophyll Front (TZCF, an important foraging region for albatrosses), sea surface temperature (SST), Multivariate ENSO Index (MEI), and the North Pacific Gyre Oscillation index (NPGO). RESULTS Foraging behavior for both species was influenced by climatic and oceanographic factors. While brooding chicks, both species traveled farther during La Niña conditions, when NPGO was high and when the TZCF was farther north (farther from the breeding site). Models showed that reproductive success for both species showed similar trends, correlating negatively with conditions observed during La Niña events (low MEI, high SST, high NPGO, increased distance to TZCF), but models for Laysan albatrosses explained a higher proportion of the variation. Spatial correlations of Laysan albatross reproductive success and SST anomalies highlighted strong negative correlations (>95 %) between habitat use and SST. Higher trip distance and/or duration during brooding were associated with decreased reproductive success. CONCLUSIONS Our findings suggest that during adverse conditions (La Niña conditions, high NPGO, northward displacement of the TZCF), both Laysan and Black-footed albatrosses took longer foraging trips and/or traveled farther during brooding, likely resulting in a lower reproductive success due to increased energetic costs. Our results link climate variability with both albatross behavior and reproductive success, information that is critical for predicting how albatross populations will respond to future climate change.
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Affiliation(s)
- Lesley H. Thorne
- />School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY 11790 USA
| | - Elliott L. Hazen
- />Environmental Research Division, Southwest Fisheries Science Center, NOAA Fisheries, 99 Pacific St., Suite 255A, Monterey, CA 93940 USA
- />Cooperative Institute for Marine Ecosystems and Climate, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060 USA
| | - Steven J. Bograd
- />Environmental Research Division, Southwest Fisheries Science Center, NOAA Fisheries, 99 Pacific St., Suite 255A, Monterey, CA 93940 USA
| | - David G. Foley
- />Environmental Research Division, Southwest Fisheries Science Center, NOAA Fisheries, 99 Pacific St., Suite 255A, Monterey, CA 93940 USA
- />Cooperative Institute for Marine Ecosystems and Climate, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060 USA
| | - Melinda G. Conners
- />Department of Ocean Sciences, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060 USA
| | - Michelle A. Kappes
- />Department of Fisheries and Wildlife, Oregon State University, 104 Nash Hall, Corvallis, OR 97331-3803 USA
- />Department of Ecology and Evolutionary Biology, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060 USA
| | - Hyemi M. Kim
- />School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY 11790 USA
| | - Daniel P. Costa
- />Department of Ecology and Evolutionary Biology, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060 USA
| | - Yann Tremblay
- />Institut de Recherche pour le Développement (IRD), Research Unit Marine Biodiversity, Exploitation and Conservation UMR248 MARBEC, Avenue Jean Monnet, CS 30171 - 34203 Sète Cedex, France
| | - Scott A. Shaffer
- />Department of Biological Sciences, San José State University, One Washington Square, San Jose, CA 95192 USA
- />Institute of Marine Sciences, University of California Santa Cruz, 100 Shaffer Road, Santa Cruz, CA 95060 USA
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Thorne LH, Johnston DW, Urban DL, Tyne J, Bejder L, Baird RW, Yin S, Rickards SH, Deakos MH, Mobley JR, Pack AA, Chapla Hill M. Predictive modeling of spinner dolphin (Stenella longirostris) resting habitat in the main Hawaiian Islands. PLoS One 2012; 7:e43167. [PMID: 22937022 PMCID: PMC3427338 DOI: 10.1371/journal.pone.0043167] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2012] [Accepted: 07/18/2012] [Indexed: 11/18/2022] Open
Abstract
Predictive habitat models can provide critical information that is necessary in many conservation applications. Using Maximum Entropy modeling, we characterized habitat relationships and generated spatial predictions of spinner dolphin (Stenella longirostris) resting habitat in the main Hawaiian Islands. Spinner dolphins in Hawai'i exhibit predictable daily movements, using inshore bays as resting habitat during daylight hours and foraging in offshore waters at night. There are growing concerns regarding the effects of human activities on spinner dolphins resting in coastal areas. However, the environmental factors that define suitable resting habitat remain unclear and must be assessed and quantified in order to properly address interactions between humans and spinner dolphins. We used a series of dolphin sightings from recent surveys in the main Hawaiian Islands and a suite of environmental variables hypothesized as being important to resting habitat to model spinner dolphin resting habitat. The model performed well in predicting resting habitat and indicated that proximity to deep water foraging areas, depth, the proportion of bays with shallow depths, and rugosity were important predictors of spinner dolphin habitat. Predicted locations of suitable spinner dolphin resting habitat provided in this study indicate areas where future survey efforts should be focused and highlight potential areas of conflict with human activities. This study provides an example of a presence-only habitat model used to inform the management of a species for which patterns of habitat availability are poorly understood.
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Affiliation(s)
- Lesley H Thorne
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, New York, United States of America.
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