1
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Abma G, Parkes MA, Razmus WO, Zhang Y, Wyatt AS, Springate E, Chapman RT, Horke DA, Minns RS. Direct Observation of a Roaming Intermediate and Its Dynamics. J Am Chem Soc 2024; 146:12595-12600. [PMID: 38682306 PMCID: PMC11082896 DOI: 10.1021/jacs.4c01543] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 04/11/2024] [Accepted: 04/12/2024] [Indexed: 05/01/2024]
Abstract
Chemical reactions are often characterized by their transition state, which defines the critical geometry the molecule must pass through to move from reactants to products. Roaming provides an alternative picture, where in a dissociation reaction, the bond breaking is frustrated and a loosely bound intermediate is formed. Following bond breaking, the two partners are seen to roam around each other at distances of several Ångstroms, forming a loosely bound, and structurally ill-defined, intermediate that can subsequently lead to reactive or unreactive collisions. Here, we present a direct and time-resolved experimental measurement of roaming. By measuring the photoelectron spectrum of UV-excited acetaldehyde with a femtosecond extreme ultraviolet pulse, we captured spectral signatures of all of the key reactive structures, including that of the roaming intermediate. This provided a direct experimental measurement of the roaming process and allowed us to identify the time scales by which the roaming intermediate is formed and removed and the electronic potential surfaces upon which roaming proceeds.
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Affiliation(s)
- Grite
L. Abma
- Institute
for Molecules and Materials, Radboud University, Heijendaalseweg 135, Nijmegen 6525 AJ, The Netherlands
| | - Michael A. Parkes
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
| | - Weronika O. Razmus
- School
of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K.
| | - Yu Zhang
- Central
Laser Facility, STFC Rutherford Appleton
Laboratory, Didcot, Oxfordshire OX11 0QX, U.K.
| | - Adam S. Wyatt
- Central
Laser Facility, STFC Rutherford Appleton
Laboratory, Didcot, Oxfordshire OX11 0QX, U.K.
| | - Emma Springate
- Central
Laser Facility, STFC Rutherford Appleton
Laboratory, Didcot, Oxfordshire OX11 0QX, U.K.
| | - Richard T. Chapman
- Central
Laser Facility, STFC Rutherford Appleton
Laboratory, Didcot, Oxfordshire OX11 0QX, U.K.
| | - Daniel A. Horke
- Institute
for Molecules and Materials, Radboud University, Heijendaalseweg 135, Nijmegen 6525 AJ, The Netherlands
| | - Russell S. Minns
- School
of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K.
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2
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Walmsley T, McManus JW, Kumagai Y, Nagaya K, Harries J, Iwayama H, Ashfold MNR, Britton M, Bucksbaum PH, Downes-Ward B, Driver T, Heathcote D, Hockett P, Howard AJ, Lee JWL, Liu Y, Kukk E, Milesevic D, Minns RS, Niozu A, Niskanen J, Orr-Ewing AJ, Owada S, Robertson PA, Rolles D, Rudenko A, Ueda K, Unwin J, Vallance C, Brouard M, Burt M, Allum F, Forbes R. The Role of Momentum Partitioning in Covariance Ion Imaging Analysis. J Phys Chem A 2024. [PMID: 38713032 DOI: 10.1021/acs.jpca.4c00999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
We present results from a covariance ion imaging study, which employs extensive filtering, on the relationship between fragment momenta to gain deeper insight into photofragmentation dynamics. A new data analysis approach is introduced that considers the momentum partitioning between the fragments of the breakup of a molecular polycation to disentangle concurrent fragmentation channels, which yield the same ion species. We exploit this approach to examine the momentum exchange relationship between the products, which provides direct insight into the dynamics of molecular fragmentation. We apply these techniques to extensively characterize the dissociation of 1-iodopropane and 2-iodopropane dications prepared by site-selective ionization of the iodine atom using extreme ultraviolet intense femtosecond laser pulses with a photon energy of 95 eV. Our assignments are supported by classical simulations, using parameters largely obtained directly from the experimental data.
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Affiliation(s)
- Tiffany Walmsley
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Joseph W McManus
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Yoshiaki Kumagai
- Department of Applied Physics, Tokyo University of Agriculture and Technology, Tokyo 184-8588, Japan
| | - Kiyonobu Nagaya
- Department of Physics, Kyoto University, Kyoto 606-8502, Japan
| | - James Harries
- National Institutes for Quantum Science and Technology (QST), SPring-8, Kouto 1-1-1, Sayo, Hyogo 679-5148, Japan
| | - Hiroshi Iwayama
- Institute for Molecular Science, Okazaki 444-8585, Japan
- Sokendai (The Graduate University for Advanced Studies), Okazaki 444-8585, Japan
| | | | - Mathew Britton
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Philip H Bucksbaum
- PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Briony Downes-Ward
- School of Chemistry, University of Southampton, Southampton SO17 1BJ, U.K
| | - Taran Driver
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - David Heathcote
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Paul Hockett
- National Research Council of Canada, Ottawa, Ontario K1A 0R6, Canada
| | - Andrew J Howard
- PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Jason W L Lee
- Deutsches Elektronen-Synchrotron (DESY), Hamburg 22607, Germany
| | - Yusong Liu
- PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Edwin Kukk
- Department of Physics and Astronomy, University of Turku, Turku FI-20014, Finland
| | - Dennis Milesevic
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Russell S Minns
- School of Chemistry, University of Southampton, Southampton SO17 1BJ, U.K
| | - Akinobu Niozu
- Graduate School of Advanced Science and Engineering, Hiroshima University, Hiroshima 739-8526, Japan
| | - Johannes Niskanen
- Department of Physics and Astronomy, University of Turku, Turku FI-20014, Finland
| | | | - Shigeki Owada
- RIKEN SPring-8 Center, Sayo, Hyogo 679-5148, Japan
- Japan Synchrotron Radiation Research Institute, Sayo, Hyogo 679-5198, Japan
| | - Patrick A Robertson
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Daniel Rolles
- J.R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, United States
| | - Artem Rudenko
- J.R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, United States
| | - Kiyoshi Ueda
- Department of Chemistry, Tohoku University, Sendai 980-8578, Japan
| | - James Unwin
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Claire Vallance
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Mark Brouard
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Michael Burt
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
| | - Felix Allum
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
- PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Ruaridh Forbes
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
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3
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Razmus WO, Allum F, Harries J, Kumagai Y, Nagaya K, Bhattacharyya S, Britton M, Brouard M, Bucksbaum PH, Cheung K, Crane SW, Fushitani M, Gabalski I, Gejo T, Ghrist A, Heathcote D, Hikosaka Y, Hishikawa A, Hockett P, Jones E, Kukk E, Iwayama H, Lam HVS, McManus JW, Milesevic D, Mikosch J, Minemoto S, Niozu A, Orr-Ewing AJ, Owada S, Rolles D, Rudenko A, Townsend D, Ueda K, Unwin J, Vallance C, Venkatachalam A, Wada SI, Walmsley T, Warne EM, Woodhouse JL, Burt M, Ashfold MNR, Minns RS, Forbes R. Exploring the ultrafast and isomer-dependent photodissociation of iodothiophenes via site-selective ionization. Phys Chem Chem Phys 2024; 26:12725-12737. [PMID: 38616653 DOI: 10.1039/d3cp06079a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
C-I bond extension and fission following ultraviolet (UV, 262 nm) photoexcitation of 2- and 3-iodothiophene is studied using ultrafast time-resolved extreme ultraviolet (XUV) ionization in conjunction with velocity map ion imaging. The photoexcited molecules and eventual I atom products are probed by site-selective ionization at the I 4d edge using intense XUV pulses, which induce multiple charges initially localized to the iodine atom. At C-I separations below the critical distance for charge transfer (CT), charge can redistribute around the molecule leading to Coulomb explosion and charged fragments with high kinetic energy. At greater C-I separations, beyond the critical distance, CT is no longer possible and the measured kinetic energies of the charged iodine atoms report on the neutral dissociation process. The time and momentum resolved measurements allow determination of the timescales and the respective product momentum and kinetic energy distributions for both isomers, which are interpreted in terms of rival 'direct' and 'indirect' dissociation pathways. The measurements are compared with a classical over the barrier model, which reveals that the onset of the indirect dissociation process is delayed by ∼1 ps relative to the direct process. The kinetics of the two processes show no discernible difference between the two parent isomers, but the branching between the direct and indirect dissociation channels and the respective product momentum distributions show isomer dependencies. The greater relative yield of indirect dissociation products from 262 nm photolysis of 3-iodothiophene (cf. 2-iodothiophene) is attributed to the different partial cross-sections for (ring-centred) π∗ ← π and (C-I bond localized) σ∗ ← (n/π) excitation in the respective parent isomers.
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Affiliation(s)
- Weronika O Razmus
- School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, UK.
| | - Felix Allum
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
| | | | - Yoshiaki Kumagai
- Department of Applied Physics, Tokyo University of Agriculture and Technology, Tokyo, Japan
| | - Kiyonobu Nagaya
- Department of Physics, Kyoto University, Kyoto 606-8502, Japan
| | - Surjendu Bhattacharyya
- J.R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, USA
| | - Mathew Britton
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Mark Brouard
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Philip H Bucksbaum
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Kieran Cheung
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Stuart W Crane
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK
| | - Mizuho Fushitani
- Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8602, Japan
| | - Ian Gabalski
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
- Department of Applied Physics, Stanford University, Stanford, California 94305, USA
| | - Tatsuo Gejo
- Graduate School of Material Science, University of Hyogo, Kuoto 3-2-1, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Aaron Ghrist
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
- Department of Applied Physics, Stanford University, Stanford, California 94305, USA
| | - David Heathcote
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Yasumasa Hikosaka
- Institute of Liberal Arts and Sciences, University of Toyama, Toyama 930-0194, Japan
| | - Akiyoshi Hishikawa
- Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8602, Japan
- Research Center for Materials Science, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8602, Japan
| | - Paul Hockett
- National Research Council of Canada, 100 Sussex Dr, Ottawa, ON K1A 0R6, Canada
| | - Ellen Jones
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Edwin Kukk
- Department of Physics and Astronomy, University of Turku, FI-20014 Turku, Finland
| | | | - Huynh V S Lam
- J.R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, USA
| | - Joseph W McManus
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Dennis Milesevic
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Jochen Mikosch
- Department of Physics, University of Kassel, Heinrich-Plett-Strasse 40, 34132 Kassel, Germany
| | - Shinichirou Minemoto
- Department of Physics, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Akinobu Niozu
- Graduate School of Advanced Science and Engineering, Hiroshima University, Higashi-Hiroshima 739-8526, Japan
| | - Andrew J Orr-Ewing
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, UK
| | - Shigeki Owada
- RIKEN SPring-8 Center, Sayo, Hyogo, 679-5148, Japan
- Japan Synchrotron Radiation Research Institute, Hyogo, Japan
| | - Daniel Rolles
- J.R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, USA
| | - Artem Rudenko
- J.R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, USA
| | - Dave Townsend
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK
| | - Kiyoshi Ueda
- Department of Chemistry, Tohoku University, Sendai 980-8578, Japan
- Department of Condensed Matter Physics and Photon Science, School of Physical Science and Technology, ShanghaiTech University, Shanghai 201210, China
| | - James Unwin
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Claire Vallance
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Anbu Venkatachalam
- J.R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, USA
| | - Shin-Ichi Wada
- Graduate School of Advanced Science and Engineering, Hiroshima University, Higashi-Hiroshima 739-8526, Japan
| | - Tiffany Walmsley
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Emily M Warne
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Joanne L Woodhouse
- School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, UK.
| | - Michael Burt
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Michael N R Ashfold
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, UK
| | - Russell S Minns
- School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, UK.
| | - Ruaridh Forbes
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
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4
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Gabalski I, Allum F, Seidu I, Britton M, Brenner G, Bromberger H, Brouard M, Bucksbaum PH, Burt M, Cryan JP, Driver T, Ekanayake N, Erk B, Garg D, Gougoula E, Heathcote D, Hockett P, Holland DMP, Howard AJ, Kumar S, Lee JWL, Li S, McManus J, Mikosch J, Milesevic D, Minns RS, Neville S, Atia-Tul-Noor, Papadopoulou CC, Passow C, Razmus WO, Röder A, Rouzée A, Simao A, Unwin J, Vallance C, Walmsley T, Wang J, Rolles D, Stolow A, Schuurman MS, Forbes R. Time-Resolved X-ray Photoelectron Spectroscopy: Ultrafast Dynamics in CS 2 Probed at the S 2p Edge. J Phys Chem Lett 2023; 14:7126-7133. [PMID: 37534743 PMCID: PMC10431593 DOI: 10.1021/acs.jpclett.3c01447] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Accepted: 07/17/2023] [Indexed: 08/04/2023]
Abstract
Recent developments in X-ray free-electron lasers have enabled a novel site-selective probe of coupled nuclear and electronic dynamics in photoexcited molecules, time-resolved X-ray photoelectron spectroscopy (TRXPS). We present results from a joint experimental and theoretical TRXPS study of the well-characterized ultraviolet photodissociation of CS2, a prototypical system for understanding non-adiabatic dynamics. These results demonstrate that the sulfur 2p binding energy is sensitive to changes in the nuclear structure following photoexcitation, which ultimately leads to dissociation into CS and S photoproducts. We are able to assign the main X-ray spectroscopic features to the CS and S products via comparison to a first-principles determination of the TRXPS based on ab initio multiple-spawning simulations. Our results demonstrate the use of TRXPS as a local probe of complex ultrafast photodissociation dynamics involving multimodal vibrational coupling, nonradiative transitions between electronic states, and multiple final product channels.
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Affiliation(s)
- Ian Gabalski
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Department
of Applied Physics, Stanford University, Stanford, California 94305, United States
| | - Felix Allum
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Linac
Coherent Light Source, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Issaka Seidu
- National
Research Council Canada, Ottawa, Ontario K1A 0R6, Canada
| | - Mathew Britton
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
| | - Günter Brenner
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | | | - Mark Brouard
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Philip H. Bucksbaum
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Department
of Applied Physics, Stanford University, Stanford, California 94305, United States
- Department
of Physics, Stanford University, Stanford, California 94305, United States
| | - Michael Burt
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - James P. Cryan
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Linac
Coherent Light Source, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
| | - Taran Driver
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Linac
Coherent Light Source, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
| | - Nagitha Ekanayake
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Benjamin Erk
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Diksha Garg
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Eva Gougoula
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - David Heathcote
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Paul Hockett
- National
Research Council Canada, Ottawa, Ontario K1A 0R6, Canada
| | | | - Andrew J. Howard
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Department
of Applied Physics, Stanford University, Stanford, California 94305, United States
| | - Sonu Kumar
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Jason W. L. Lee
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Siqi Li
- Linac
Coherent Light Source, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
| | - Joseph McManus
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Jochen Mikosch
- Institut
für Physik, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - Dennis Milesevic
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Russell S. Minns
- School
of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K.
| | - Simon Neville
- National
Research Council Canada, Ottawa, Ontario K1A 0R6, Canada
| | - Atia-Tul-Noor
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | | | - Christopher Passow
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Weronika O. Razmus
- School
of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K.
| | - Anja Röder
- Max-Born-Institute, Max-Born-Straße 2A, 12489 Berlin, Germany
| | - Arnaud Rouzée
- Max-Born-Institute, Max-Born-Straße 2A, 12489 Berlin, Germany
| | - Alcides Simao
- Deutsches
Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - James Unwin
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Claire Vallance
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Tiffany Walmsley
- Chemistry
Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, U.K.
| | - Jun Wang
- Stanford
PULSE Institute, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
- Department
of Applied Physics, Stanford University, Stanford, California 94305, United States
| | - Daniel Rolles
- J.
R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, Kansas 66506, United States
| | - Albert Stolow
- National
Research Council Canada, Ottawa, Ontario K1A 0R6, Canada
- Department
of Physics, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
- Department
of Chemistry and Biomolecular Sciences, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
- NRC-uOttawa Joint Centre
for Extreme Photonics, Ottawa, Ontario K1A 0R6, Canada
| | - Michael S. Schuurman
- National
Research Council Canada, Ottawa, Ontario K1A 0R6, Canada
- Department
of Chemistry and Biomolecular Sciences, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | - Ruaridh Forbes
- Linac
Coherent Light Source, SLAC National Accelerator
Laboratory, Menlo
Park, California 94025, United States
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5
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Gabalski I, Sere M, Acheson K, Allum F, Boutet S, Dixit G, Forbes R, Glownia JM, Goff N, Hegazy K, Howard AJ, Liang M, Minitti MP, Minns RS, Natan A, Peard N, Rasmus WO, Sension RJ, Ware MR, Weber PM, Werby N, Wolf TJA, Kirrander A, Bucksbaum PH. Transient vibration and product formation of photoexcited CS 2 measured by time-resolved x-ray scattering. J Chem Phys 2022; 157:164305. [PMID: 36319419 PMCID: PMC9625835 DOI: 10.1063/5.0113079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 10/03/2022] [Indexed: 11/14/2022] Open
Abstract
We have observed details of the internal motion and dissociation channels in photoexcited carbon disulfide (CS2) using time-resolved x-ray scattering (TRXS). Photoexcitation of gas-phase CS2 with a 200 nm laser pulse launches oscillatory bending and stretching motion, leading to dissociation of atomic sulfur in under a picosecond. During the first 300 fs following excitation, we observe significant changes in the vibrational frequency as well as some dissociation of the C-S bond, leading to atomic sulfur in the both 1D and 3P states. Beyond 1400 fs, the dissociation is consistent with primarily 3P atomic sulfur dissociation. This channel-resolved measurement of the dissociation time is based on our analysis of the time-windowed dissociation radial velocity distribution, which is measured using the temporal Fourier transform of the TRXS data aided by a Hough transform that extracts the slopes of linear features in an image. The relative strength of the two dissociation channels reflects both their branching ratio and differences in the spread of their dissociation times. Measuring the time-resolved dissociation radial velocity distribution aids the resolution of discrepancies between models for dissociation proposed by prior photoelectron spectroscopy work.
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Affiliation(s)
- Ian Gabalski
- Author to whom correspondence should be addressed:
| | | | - Kyle Acheson
- School of Chemistry, University of Edinburgh, Edinburgh EH8 9YL, United Kingdom
| | | | - Sébastien Boutet
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Gopal Dixit
- Department of Physics, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | | | - James M. Glownia
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Nathan Goff
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | | | | | - Mengning Liang
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Michael P. Minitti
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Russell S. Minns
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - Adi Natan
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Nolan Peard
- Department of Applied Physics, Stanford University, Stanford, California 94305, USA
| | - Weronika O. Rasmus
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - Roseanne J. Sension
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Matthew R. Ware
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Peter M. Weber
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | | | | | - Adam Kirrander
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, OX1 3QX Oxford, United Kingdom
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6
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McManus JW, Walmsley T, Nagaya K, Harries JR, Kumagai Y, Iwayama H, Ashfold MNR, Britton M, Bucksbaum PH, Downes-Ward B, Driver T, Heathcote D, Hockett P, Howard AJ, Kukk E, Lee JWL, Liu Y, Milesevic D, Minns RS, Niozu A, Niskanen J, Orr-Ewing AJ, Owada S, Rolles D, Robertson PA, Rudenko A, Ueda K, Unwin J, Vallance C, Burt M, Brouard M, Forbes R, Allum F. Disentangling sequential and concerted fragmentations of molecular polycations with covariant native frame analysis. Phys Chem Chem Phys 2022; 24:22699-22709. [PMID: 36106844 DOI: 10.1039/d2cp03029b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We present results from an experimental ion imaging study into the fragmentation dynamics of 1-iodopropane and 2-iodopropane following interaction with extreme ultraviolet intense femtosecond laser pulses with a photon energy of 95 eV. Using covariance imaging analysis, a range of observed fragmentation pathways of the resulting polycations can be isolated and interrogated in detail at relatively high ion count rates (∼12 ions shot-1). By incorporating the recently developed native frames analysis approach into the three-dimensional covariance imaging procedure, contributions from three-body concerted and sequential fragmentation mechanisms can be isolated. The angular distribution of the fragment ions is much more complex than in previously reported studies for triatomic polycations, and differs substantially between the two isomeric species. With support of simple simulations of the dissociation channels of interest, detailed physical insights into the fragmentation dynamics are obtained, including how the initial dissociation step in a sequential mechanism influences rovibrational dynamics in the metastable intermediate ion and how signatures of this nuclear motion manifest in the measured signals.
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Affiliation(s)
- Joseph W McManus
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Tiffany Walmsley
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Kiyonobu Nagaya
- Department of Physics, Kyoto University, Kyoto, 606-8502, Japan
| | | | - Yoshiaki Kumagai
- Department of Applied Physics, Tokyo University of Agriculture and Technology, Koganei-shi, Tokyo 184-8588, Japan
| | - Hiroshi Iwayama
- UVSOR Synchrotron Facility, Institute for Molecular Science, Okazaki 444-8585, Japan
| | - Michael N R Ashfold
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, UK
| | - Mathew Britton
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Philip H Bucksbaum
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Briony Downes-Ward
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Taran Driver
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - David Heathcote
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Paul Hockett
- National Research Council of Canada, 100 Sussex Dr., Ottawa, ON K1A 0R6, Canada
| | - Andrew J Howard
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Edwin Kukk
- Department of Physics and Astronomy, University of Turku, Turku, FI-20014, Finland
| | - Jason W L Lee
- Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - Yusong Liu
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Dennis Milesevic
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Russell S Minns
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Akinobu Niozu
- Graduate School of Advanced Science and Engineering, Hiroshima University, Higashi-Hiroshima 739-8526, Japan
| | - Johannes Niskanen
- Department of Physics and Astronomy, University of Turku, Turku, FI-20014, Finland
| | - Andrew J Orr-Ewing
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, UK
| | - Shigeki Owada
- RIKEN SPring-8 Center, Sayo, Hyogo, 679-5148, Japan.,Japan Synchrotron Radiation Research Institute, Hyogo, Japan
| | - Daniel Rolles
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, KS, 66506, USA
| | - Patrick A Robertson
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Artem Rudenko
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, KS, 66506, USA
| | - Kiyoshi Ueda
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai, 980-8577, Japan
| | - James Unwin
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Claire Vallance
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Michael Burt
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Mark Brouard
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Ruaridh Forbes
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA.
| | - Felix Allum
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK.,Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.,Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA.
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7
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Razmus WO, Acheson K, Bucksbaum P, Centurion M, Champenois E, Gabalski I, Hoffman MC, Howard A, Lin MF, Liu Y, Nunes P, Saha S, Shen X, Ware M, Warne EM, Weinacht T, Wilkin K, Yang J, Wolf TJA, Kirrander A, Minns RS, Forbes R. Multichannel photodissociation dynamics in CS 2 studied by ultrafast electron diffraction. Phys Chem Chem Phys 2022; 24:15416-15427. [PMID: 35707953 DOI: 10.1039/d2cp01268e] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The structural dynamics of photoexcited gas-phase carbon disulfide (CS2) molecules are investigated using ultrafast electron diffraction. The dynamics were triggered by excitation of the optically bright 1B2(1Σu+) state by an ultraviolet femtosecond laser pulse centred at 200 nm. In accordance with previous studies, rapid vibrational motion facilitates a combination of internal conversion and intersystem crossing to lower-lying electronic states. Photodissociation via these electronic manifolds results in the production of CS fragments in the electronic ground state and dissociated singlet and triplet sulphur atoms. The structural dynamics are extracted from the experiment using a trajectory-fitting filtering approach, revealing the main characteristics of the singlet and triplet dissociation pathways. Finally, the effect of the time-resolution on the experimental signal is considered and an outlook to future experiments provided.
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Affiliation(s)
- Weronika O Razmus
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
| | - Kyle Acheson
- EaStCHEM, School of Chemistry and Centre for Science at Extreme Conditions, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, UK.
| | - Philip Bucksbaum
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Martin Centurion
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Elio Champenois
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Ian Gabalski
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Matthias C Hoffman
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA.
| | - Andrew Howard
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Ming-Fu Lin
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA.
| | - Yusong Liu
- Department of Physics and Astronomy, Stony Brook University, Stony Brook, New York 11794, USA
| | - Pedro Nunes
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Sajib Saha
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Xiaozhe Shen
- SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Matthew Ware
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Emily M Warne
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
| | - Thomas Weinacht
- Department of Physics and Astronomy, Stony Brook University, Stony Brook, New York 11794, USA
| | - Kyle Wilkin
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Jie Yang
- SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Thomas J A Wolf
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA
| | - Adam Kirrander
- EaStCHEM, School of Chemistry and Centre for Science at Extreme Conditions, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, UK.
| | - Russell S Minns
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
| | - Ruaridh Forbes
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA.
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8
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Ashfold M, Chergui M, Fischer I, Ge L, Grell G, Ivanov M, Kirrander A, Kornilov O, Krishnan SR, Küpper J, Kuttner C, Makhija V, Martín F, Matsika S, Minns RS, Natan A, Neumark DM, Palacios A, Pratt S, Röder A, Rost JM, Ruberti M, Stolow A, Titov E, Young L. Time-resolved ultrafast spectroscopy: general discussion. Faraday Discuss 2021; 228:329-348. [PMID: 33982724 DOI: 10.1039/d1fd90024b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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9
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Allum F, Calegari F, Cavaletto SM, Centurion M, Dixit G, Fasshauer E, Fischer I, Forbes R, Grell G, Ivanov M, Kirrander A, Kornilov O, Küpper J, Kuttner C, Marangos J, Matsika S, Maxwell A, Minns RS, Moreno Carrascosa A, Natan A, Neumark D, Odate A, Oyarzún A, Palacios A, Pfeifer T, Röder A, Rost JM, Rouzée A, Stolow A, Titov E, Weber PM, Wolf T. Ultrafast X-ray science: general discussion. Faraday Discuss 2021; 228:597-621. [PMID: 33978014 DOI: 10.1039/d1fd90026a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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10
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Warne EM, Smith AD, Horke DA, Springate E, Jones AJH, Cacho C, Chapman RT, Minns RS. Time resolved detection of the S(1D) product of the UV induced dissociation of CS2. J Chem Phys 2021; 154:034302. [DOI: 10.1063/5.0035045] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Emily M. Warne
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - Adam D. Smith
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - Daniel A. Horke
- Institute for Molecules and Materials, Radboud University, Heijendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
- Center for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany
- The Hamburg Centre for Ultrafast Imaging, Universität Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - Emma Springate
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Alfred J. H. Jones
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Cephise Cacho
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Richard T. Chapman
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Russell S. Minns
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
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11
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Allum F, Anders N, Brouard M, Bucksbaum P, Burt M, Downes-Ward B, Grundmann S, Harries J, Ishimura Y, Iwayama H, Kaiser L, Kukk E, Lee J, Liu X, Minns RS, Nagaya K, Niozu A, Niskanen J, O'Neal J, Owada S, Pickering J, Rolles D, Rudenko A, Saito S, Ueda K, Vallance C, Werby N, Woodhouse J, You D, Ziaee F, Driver T, Forbes R. Multi-channel photodissociation and XUV-induced charge transfer dynamics in strong-field-ionized methyl iodide studied with time-resolved recoil-frame covariance imaging. Faraday Discuss 2021; 228:571-596. [PMID: 33629700 DOI: 10.1039/d0fd00115e] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The photodissociation dynamics of strong-field ionized methyl iodide (CH3I) were probed using intense extreme ultraviolet (XUV) radiation produced by the SPring-8 Angstrom Compact free electron LAser (SACLA). Strong-field ionization and subsequent fragmentation of CH3I was initiated by an intense femtosecond infrared (IR) pulse. The ensuing fragmentation and charge transfer processes following multiple ionization by the XUV pulse at a range of pump-probe delays were followed in a multi-mass ion velocity-map imaging (VMI) experiment. Simultaneous imaging of a wide range of resultant ions allowed for additional insight into the complex dynamics by elucidating correlations between the momenta of different fragment ions using time-resolved recoil-frame covariance imaging analysis. The comprehensive picture of the photodynamics that can be extracted provides promising evidence that the techniques described here could be applied to study ultrafast photochemistry in a range of molecular systems at high count rates using state-of-the-art advanced light sources.
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Affiliation(s)
- Felix Allum
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Nils Anders
- Institut für Kernphysik, Goethe-Universität, Max-von-Laue-Strasse 1, 60438 Frankfurt am Main, Germany
| | - Mark Brouard
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Philip Bucksbaum
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
| | - Michael Burt
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Briony Downes-Ward
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Sven Grundmann
- Institut für Kernphysik, Goethe-Universität, Max-von-Laue-Strasse 1, 60438 Frankfurt am Main, Germany
| | - James Harries
- QST, SPring-8, Kouto 1-1-1, Sayo, Hyogo 679-5148, Japan
| | - Yudai Ishimura
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai, 980-8577, Japan
| | - Hiroshi Iwayama
- UVSOR Synchrotron Facility, Institute for Molecular Science, Okazaki 444-8585, Japan
| | - Leon Kaiser
- Institut für Kernphysik, Goethe-Universität, Max-von-Laue-Strasse 1, 60438 Frankfurt am Main, Germany
| | - Edwin Kukk
- Department of Physics and Astronomy, University of Turku, Turku, FI-20014, Finland
| | - Jason Lee
- Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - Xiaojing Liu
- School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Russell S Minns
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Kiyonobu Nagaya
- Department of Physics, Kyoto University, Kyoto, 606-8502, Japan
| | - Akinobu Niozu
- Department of Physics, Kyoto University, Kyoto, 606-8502, Japan
| | - Johannes Niskanen
- Department of Physics and Astronomy, University of Turku, Turku, FI-20014, Finland
| | - Jordan O'Neal
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
| | | | - James Pickering
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Daniel Rolles
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, KS 66506, USA
| | - Artem Rudenko
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, KS 66506, USA
| | - Shu Saito
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai, 980-8577, Japan
| | - Kiyoshi Ueda
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai, 980-8577, Japan
| | - Claire Vallance
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3TA, UK
| | - Nicholas Werby
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
| | - Joanne Woodhouse
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Daehyun You
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai, 980-8577, Japan
| | - Farzaneh Ziaee
- J. R. Macdonald Laboratory, Department of Physics, Kansas State University, Manhattan, KS 66506, USA
| | - Taran Driver
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
| | - Ruaridh Forbes
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
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12
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Ganjitabar H, Singh DP, Chapman R, Gardner A, Minns RS, Powis I, Reid KL, Vredenborg A. The role of the intermediate state in angle-resolved photoelectron studies using (2 + 1) resonance-enhanced multiphoton ionization of the chiral terpenes, α-pinene and 3-carene. Mol Phys 2020. [DOI: 10.1080/00268976.2020.1808907] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Hassan Ganjitabar
- School of Chemistry, The University of Nottingham, University Park, Nottingham, UK
| | - Dhirendra P. Singh
- School of Chemistry, The University of Nottingham, University Park, Nottingham, UK
| | - Richard Chapman
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire, UK
| | - Adrian Gardner
- School of Chemistry, The University of Nottingham, University Park, Nottingham, UK
- Stephenson Institute for Renewable Energy and the Department of Chemistry, University of Liverpool, Liverpool, UK
| | - Russell S. Minns
- School of Chemistry, University of Southampton, Highfield, Southampton, UK
| | - Ivan Powis
- School of Chemistry, The University of Nottingham, University Park, Nottingham, UK
| | - Katharine L. Reid
- School of Chemistry, The University of Nottingham, University Park, Nottingham, UK
| | - Arno Vredenborg
- Institute for Molecules and Materials, Radboud University Nijmegen, Nijmegen, The Netherlands
- MassSpecpecD BV, Enschede, The Netherlands
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13
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Warne EM, Downes-Ward B, Woodhouse J, Parkes MA, Springate E, Pearcy PAJ, Zhang Y, Karras G, Wyatt AS, Chapman RT, Minns RS. Photodissociation dynamics of methyl iodide probed using femtosecond extreme ultraviolet photoelectron spectroscopy. Phys Chem Chem Phys 2020; 22:25695-25703. [DOI: 10.1039/d0cp03478a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Femtosecond pump–probe photoelectron spectroscopy measurements using an extreme ultraviolet probe have been made on the photodissociation dynamics of UV (269 nm) excited CH3I.
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Affiliation(s)
- Emily M. Warne
- School of Chemistry
- University of Southampton
- Southampton SO17 1BJ
- UK
| | | | - Joanne Woodhouse
- School of Chemistry
- University of Southampton
- Southampton SO17 1BJ
- UK
| | | | - Emma Springate
- Central Laser Facility
- STFC Rutherford Appleton Laboratory
- Didcot
- UK
| | | | - Yu Zhang
- Central Laser Facility
- STFC Rutherford Appleton Laboratory
- Didcot
- UK
| | - Gabriel Karras
- Central Laser Facility
- STFC Rutherford Appleton Laboratory
- Didcot
- UK
| | - Adam S. Wyatt
- Central Laser Facility
- STFC Rutherford Appleton Laboratory
- Didcot
- UK
| | | | - Russell S. Minns
- School of Chemistry
- University of Southampton
- Southampton SO17 1BJ
- UK
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14
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Warne EM, Downes-Ward B, Woodhouse J, Parkes MA, Bellshaw D, Springate E, Majchrzak P, Zhang Y, Karras G, Wyatt AS, Chapman RT, Kirrander A, Minns RS. Photodissociation dynamics of CH3I probed via multiphoton ionisation photoelectron spectroscopy. Phys Chem Chem Phys 2019; 21:11142-11149. [DOI: 10.1039/c9cp01477b] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Femtosecond photoelectron spectroscopy measurements of dissociation CH3I show complex dynamics in the high energy region of absorption band A.
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15
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Bellshaw D, Minns RS, Kirrander A. Correspondence between electronic structure calculations and simulations: nonadiabatic dynamics in CS2. Phys Chem Chem Phys 2019; 21:14226-14237. [DOI: 10.1039/c8cp05693e] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The choice of ab initio electronic structure method is an important factor in determining the fidelity of nonadiabatic dynamics simulations.
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Affiliation(s)
- Darren Bellshaw
- EaStCHEM, School of Chemistry, University of Edinburgh
- EH9 3FJ Edinburgh
- UK
| | - Russell S. Minns
- Chemistry, University of Southampton, Highfield
- Southampton SO17 1BJ
- UK
| | - Adam Kirrander
- EaStCHEM, School of Chemistry, University of Edinburgh
- EH9 3FJ Edinburgh
- UK
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16
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Smith AD, Warne EM, Bellshaw D, Horke DA, Tudorovskya M, Springate E, Jones AJH, Cacho C, Chapman RT, Kirrander A, Minns RS. Mapping the Complete Reaction Path of a Complex Photochemical Reaction. Phys Rev Lett 2018; 120:183003. [PMID: 29775354 DOI: 10.1103/physrevlett.120.183003] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Indexed: 06/08/2023]
Abstract
We probe the dynamics of dissociating CS_{2} molecules across the entire reaction pathway upon excitation. Photoelectron spectroscopy measurements using laboratory-generated femtosecond extreme ultraviolet pulses monitor the competing dissociation, internal conversion, and intersystem crossing dynamics. Dissociation occurs either in the initially excited singlet manifold or, via intersystem crossing, in the triplet manifold. Both product channels are monitored and show that, despite being more rapid, the singlet dissociation is the minor product and that triplet state products dominate the final yield. We explain this by a consideration of accurate potential energy curves for both the singlet and triplet states. We propose that rapid internal conversion stabilizes the singlet population dynamically, allowing for singlet-triplet relaxation via intersystem crossing and the efficient formation of spin-forbidden dissociation products on longer timescales. The study demonstrates the importance of measuring the full reaction pathway for defining accurate reaction mechanisms.
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Affiliation(s)
- Adam D Smith
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - Emily M Warne
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - Darren Bellshaw
- EaStCHEM, School of Chemistry, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, United Kingdom
| | - Daniel A Horke
- Center for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany
- The Hamburg Centre for Ultrafast Imaging, Universität Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - Maria Tudorovskya
- EaStCHEM, School of Chemistry, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, United Kingdom
| | - Emma Springate
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Alfred J H Jones
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Cephise Cacho
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Richard T Chapman
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Adam Kirrander
- EaStCHEM, School of Chemistry, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, United Kingdom
| | - Russell S Minns
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
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Tudorovskaya M, Minns RS, Kirrander A. Effects of probe energy and competing pathways on time-resolved photoelectron spectroscopy: the ring-opening of 1,3-cyclohexadiene. Phys Chem Chem Phys 2018; 20:17714-17726. [DOI: 10.1039/c8cp02397b] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Photoelectron spectra for the ring-opening dynamics of 1,3-cyclohexadiene are studied using a model based on quantum molecular dynamics and the Dyson orbital approach.
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Affiliation(s)
| | | | - Adam Kirrander
- EaStCHEM
- School of Chemistry
- University of Edinburgh
- Edinburgh
- UK
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18
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Bellshaw D, Horke DA, Smith AD, Watts HM, Jager E, Springate E, Alexander O, Cacho C, Chapman RT, Kirrander A, Minns RS. Ab-initio surface hopping and multiphoton ionisation study of the photodissociation dynamics of CS2. Chem Phys Lett 2017. [DOI: 10.1016/j.cplett.2017.02.058] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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19
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Horke DA, Watts HM, Smith AD, Jager E, Springate E, Alexander O, Cacho C, Chapman RT, Minns RS. Publisher's Note: Hydrogen Bonds in Excited State Proton Transfer [Phys. Rev. Lett. 117, 163002 (2016)]. Phys Rev Lett 2017; 118:139902. [PMID: 28409949 DOI: 10.1103/physrevlett.118.139902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Indexed: 06/07/2023]
Abstract
This corrects the article DOI: 10.1103/PhysRevLett.117.163002.
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20
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Kirrander A, Minns RS. Correction: Highlights from Faraday Discussion 194: Ultrafast Imaging of Photochemical Dynamics, Edinburgh, 2016. Chem Commun (Camb) 2017; 53:983. [DOI: 10.1039/c6cc90565j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Correction for ‘Highlights from Faraday Discussion 193: Ultrafast Imaging of Photochemical Dynamics, Edinburgh, 2016’ by Adam Kirrander and Russell S. Minns, Chem. Commun., 2016, 52, 13631–13636.
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Affiliation(s)
- Adam Kirrander
- EaStCHEM
- School of Chemistry
- University of Edinburgh
- Edinburgh EH9 3FJ
- UK
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21
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Orr-Ewing AJ, Kornilov O, Sølling TI, Keane T, Minitti MP, Wörner HJ, Schalk O, Roberts GM, Minns RS, Milne CJ, Miseikis L, Penfold TJ, Miller RJD, Domcke W, Centurion M, Ueda K, Weber PM, Gessner O, Neumark DM, Stolow A, Yano J, Mukamel S, Stavros VG. Vibrational and condensed phase dynamics: general discussion. Faraday Discuss 2016; 194:747-775. [PMID: 27901160 DOI: 10.1039/c6fd90073a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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22
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Kirrander A, Minns RS. Highlights from Faraday Discussion 193: Ultrafast Imaging of Photochemical Dynamics, Edinburgh, 2016. Chem Commun (Camb) 2016; 52:13631-13636. [PMID: 27824365 DOI: 10.1039/c6cc90504h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
On August 31st 2016, 116 delegates from 16 countries gathered at the handsome and historic premises of the Royal Society of Edinburgh.
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Affiliation(s)
- Adam Kirrander
- EaStCHEM, School of Chemistry, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, UK.
| | - Russell S Minns
- Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, UK.
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Horke DA, Watts HM, Smith AD, Jager E, Springate E, Alexander O, Cacho C, Chapman RT, Minns RS. Hydrogen Bonds in Excited State Proton Transfer. Phys Rev Lett 2016; 117:163002. [PMID: 27792360 DOI: 10.1103/physrevlett.117.163002] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2016] [Indexed: 06/06/2023]
Abstract
Hydrogen bonding interactions between biological chromophores and their surrounding protein and solvent environment significantly affect the photochemical pathways of the chromophore and its biological function. A common first step in the dynamics of these systems is excited state proton transfer between the noncovalently bound molecules, which stabilizes the system against dissociation and principally alters relaxation pathways. Despite such fundamental importance, studying excited state proton transfer across a hydrogen bond has proven difficult, leaving uncertainties about the mechanism. Through time-resolved photoelectron imaging measurements, we demonstrate how the addition of a single hydrogen bond and the opening of an excited state proton transfer channel dramatically changes the outcome of a photochemical reaction, from rapid dissociation in the isolated chromophore to efficient stabilization and ground state recovery in the hydrogen bonded case, and uncover the mechanism of excited state proton transfer at a hydrogen bond, which follows sequential hydrogen and charge transfer processes.
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Affiliation(s)
- D A Horke
- Center for Free-Electron Laser Science, DESY, Notkestrasse 85, 22607 Hamburg, Germany
| | - H M Watts
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - A D Smith
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - E Jager
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
| | - E Springate
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - O Alexander
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - C Cacho
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - R T Chapman
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - R S Minns
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, United Kingdom
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Smith AD, Watts HM, Jager E, Horke DA, Springate E, Alexander O, Cacho C, Chapman RT, Minns RS. Resonant multiphoton ionisation probe of the photodissociation dynamics of ammonia. Phys Chem Chem Phys 2016; 18:28150-28156. [PMID: 27722319 DOI: 10.1039/c6cp05279g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The dissociation dynamics of the Ã-state of ammonia have been studied using a resonant multiphoton ionisation probe in a photoelectron spectroscopy experiment. The use of a resonant intermediate in the multiphoton ionisation process changes the ionisation propensity, allowing access to different ion states when compared with equivalent single photon ionisation experiments. Ionisation through the E' 1A1' Rydberg intermediate means we maintain overlap with the ion state for an extended period, allowing us to monitor the excited state population for several hundred femtoseconds. The vibrational states in the photoelectron spectrum show two distinct timescales, 200 fs and 320 fs, that we assign to the non-adiabatic and adiabatic dissociation processes respectively. The different timescales derive from differences in the wavepacket trajectories for the two dissociation pathways that resonantly excite different vibrational states in the intermediate Rydberg state. The timescales are similar to those obtained from time resolved ion kinetic energy release measurements, suggesting we can measure the different trajectories taken out to the region of conical intersection.
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Affiliation(s)
- Adam D Smith
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
| | - Hannah M Watts
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
| | - Edward Jager
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
| | - Daniel A Horke
- Center for Free-Electron Laser Science, DESY, Notkestrasse 85, 22607 Hamburg, Germany
| | - Emma Springate
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, UK
| | - Oliver Alexander
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, UK
| | - Cephise Cacho
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, UK
| | - Richard T Chapman
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, UK
| | - Russell S Minns
- Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
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25
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Affiliation(s)
| | - Adam Kirrander
- EaStCHEM
- School of Chemistry
- University of Edinburgh
- Edinburgh EH9 3FJ
- UK
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26
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Butorac J, Wilson EL, Fielding HH, Brown WA, Minns RS. A RAIRS, TPD and femtosecond laser-induced desorption study of CO, NO and coadsorbed CO + NO on Pd(111). RSC Adv 2016. [DOI: 10.1039/c6ra13722a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Here we describe novel RAIRS, TPD and LID studies of CO, NO and coadsorbed CO and NO on Pd.
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Affiliation(s)
| | - Emma L. Wilson
- Department of Chemistry
- University College London
- London
- UK
| | | | - Wendy A. Brown
- Department of Chemistry
- University College London
- London
- UK
- Division of Chemistry
| | - Russell S. Minns
- Department of Chemistry
- University College London
- London
- UK
- Chemistry
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27
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Orr-Ewing AJ, Verlet JRR, Penfold TJ, Minns RS, Minitti MP, Sølling TI, Schalk O, Kowalewski M, Marangos JP, Robb MA, Johnson AS, Wörner HJ, Shalashilin DV, Miller RJD, Domcke W, Ueda K, Weber PM, Cireasa R, Vacher M, Roberts GM, Decleva P, Bencivenga F, Neumark DM, Gessner O, Stolow A, Mishra PK, Polyak I, Baeck KK, Kirrander A, Dowek D, Jiménez-Galán Á, Martín F, Mukamel S, Sekikawa T, Gelin MF, Townsend D, Makhov DV, Neville SP. Electronic and non-adiabatic dynamics: general discussion. Faraday Discuss 2016; 194:209-257. [PMID: 27896343 DOI: 10.1039/c6fd90070d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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28
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Badiola KA, Bird C, Brocklesby WS, Casson J, Chapman RT, Coles SJ, Cronshaw JR, Fisher A, Frey JG, Gloria D, Grossel MC, Hibbert DB, Knight N, Mapp LK, Marazzi L, Matthews B, Milsted A, Minns RS, Mueller KT, Murphy K, Parkinson T, Quinnell R, Robinson JS, Robertson MN, Robins M, Springate E, Tizzard G, Todd MH, Williamson AE, Willoughby C, Yang E, Ylioja PM. Experiences with a researcher-centric ELN. Chem Sci 2015; 6:1614-1629. [PMID: 29308130 PMCID: PMC5639792 DOI: 10.1039/c4sc02128b] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2014] [Accepted: 10/20/2014] [Indexed: 11/28/2022] Open
Abstract
Electronic Laboratory Notebooks (ELNs) are progressively replacing traditional paper books in both commercial research establishments and academic institutions. University researchers require specific features from ELNs, given the need to promote cross-institutional collaborative working, to enable the sharing of procedures and results, and to facilitate publication. The LabTrove ELN, which we use as our exemplar, was designed to be researcher-centric (i.e., not only aimed at the individual researcher's basic needs rather than to a specific institutional or subject or disciplinary agenda, but also able to be tailored because it is open source). LabTrove is being used in a heterogeneous set of academic laboratories, for a range of purposes, including analytical chemistry, X-ray studies, drug discovery and a biomaterials project. Researchers use the ELN for recording experiments, preserving data collected, and for project coordination. This perspective article describes the experiences of those researchers from several viewpoints, demonstrating how a web-based open source electronic notebook can meet the diverse needs of academic researchers.
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Affiliation(s)
- Katrina A Badiola
- School of Chemistry , The University of Sydney , NSW 2006 , Australia
| | - Colin Bird
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | | | - John Casson
- Scientific Computing Department , STFC Rutherford Appleton Laboratory , Chilton , Didcot , Oxfordshire OX11 0QX , UK
| | - Richard T Chapman
- Central Laser Facility , STFC Rutherford Appleton Laboratory , Chilton , Didcot , Oxfordshire OX11 0QX , UK
| | - Simon J Coles
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - James R Cronshaw
- School of Chemistry , The University of Sydney , NSW 2006 , Australia
| | - Adam Fisher
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Jeremy G Frey
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Danmar Gloria
- School of Chemistry , UNSW Australia , Sydney , NSW 2052 , Australia
| | - Martin C Grossel
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - D Brynn Hibbert
- School of Chemistry , UNSW Australia , Sydney , NSW 2052 , Australia
| | - Nicola Knight
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Lucy K Mapp
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Luke Marazzi
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Brian Matthews
- Scientific Computing Department , STFC Rutherford Appleton Laboratory , Chilton , Didcot , Oxfordshire OX11 0QX , UK
| | - Andy Milsted
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
- Electronics and Computer Science , University of Southampton , Southampton , SO17 1BJ , UK
| | - Russell S Minns
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Karl T Mueller
- Penn State University , Department of Chemistry , University Park , 104 Chemistry Building , PA , USA
| | - Kelly Murphy
- Penn State University , Department of Chemistry , University Park , 104 Chemistry Building , PA , USA
| | - Tim Parkinson
- Electronics and Computer Science , University of Southampton , Southampton , SO17 1BJ , UK
| | - Rosanne Quinnell
- School of Chemistry , The University of Sydney , NSW 2006 , Australia
| | - John S Robinson
- Electronics and Computer Science , University of Southampton , Southampton , SO17 1BJ , UK
| | | | - Michael Robins
- School of Chemistry , The University of Sydney , NSW 2006 , Australia
| | - Emma Springate
- Central Laser Facility , STFC Rutherford Appleton Laboratory , Chilton , Didcot , Oxfordshire OX11 0QX , UK
| | - Graham Tizzard
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Matthew H Todd
- School of Chemistry , The University of Sydney , NSW 2006 , Australia
| | | | - Cerys Willoughby
- Chemistry , University of Southampton , Southampton , SO17 1BJ , UK .
| | - Erica Yang
- Scientific Computing Department , STFC Rutherford Appleton Laboratory , Chilton , Didcot , Oxfordshire OX11 0QX , UK
| | - Paul M Ylioja
- School of Chemistry , The University of Sydney , NSW 2006 , Australia
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29
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Galinis G, Mendoza Luna LG, Watkins MJ, Ellis AM, Minns RS, Mladenović M, Lewerenz M, Chapman RT, Turcu ICE, Cacho C, Springate E, Kazak L, Göde S, Irsig R, Skruszewicz S, Tiggesbäumker J, Meiwes-Broer KH, Rouzée A, Underwood JG, Siano M, von Haeften K. Formation of coherent rotational wavepackets in small molecule-helium clusters using impulsive alignment. Faraday Discuss 2014; 171:195-218. [PMID: 25415646 DOI: 10.1039/c4fd00099d] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We show that rotational line spectra of molecular clusters with near zero permanent dipole moments can be observed using impulsive alignment. Aligned rotational wavepackets were generated by non-resonant interaction with intense femtosecond laser pump pulses and then probed using Coulomb explosion by a second, time-delayed femtosecond laser pulse. By means of a Fourier transform a rich spectrum of rotational eigenstates was derived. For the smallest cluster, C(2)H(2)-He, we were able to establish essentially all rotational eigenstates up to the dissociation threshold on the basis of theoretical level predictions. The C(2)H(2)-He complex is found to exhibit distinct features of large amplitude motion and very early onset of free internal rotor energy level structure.
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Affiliation(s)
- Gediminas Galinis
- University of Leicester, Department of Physics & Astronomy, Leicester, LE1 7RH, UK.
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30
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Galinis G, Cacho C, Chapman RT, Ellis AM, Lewerenz M, Mendoza Luna LG, Minns RS, Mladenović M, Rouzée A, Springate E, Turcu ICE, Watkins MJ, von Haeften K. Probing the structure and dynamics of molecular clusters using rotational wave packets. Phys Rev Lett 2014; 113:043004. [PMID: 25105616 DOI: 10.1103/physrevlett.113.043004] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2014] [Indexed: 06/03/2023]
Abstract
Rotational wave packets of the weakly bound C(2)H(2)-He complex have been created using impulsive alignment. The coherent rotational dynamics were monitored for 600 ps enabling extraction of a frequency spectrum showing multiple rotational energy levels up to J = 4. spectrum has been combined with ab initio calculations to show that the complex has a highly delocalized structure and is bound only by ca. 7 cm(-1). The experiments demonstrate how highly featured rotational spectra can be obtained from an extremely cold environment where only the lowest rotational energy states are initially populated.
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Affiliation(s)
- Gediminas Galinis
- University of Leicester, Department of Physics & Astronomy, Leicester LE1 7RH, United Kingdom
| | - Cephise Cacho
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Harwell Oxford, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Richard T Chapman
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Harwell Oxford, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Andrew M Ellis
- University of Leicester, Department of Chemistry, Leicester LE1 7RH, United Kingdom
| | - Marius Lewerenz
- Université Paris-Est, Laboratoire Modélisation et Simulation Multi Echelle, MSME UMR 8208 CNRS, 5 bd Descartes, 77454 Marne-la-Vallée, France
| | - Luis G Mendoza Luna
- University of Leicester, Department of Physics & Astronomy, Leicester LE1 7RH, United Kingdom
| | - Russell S Minns
- University of Southampton, Chemistry, Southampton SO17 1BJ, United Kingdom
| | - Mirjana Mladenović
- Université Paris-Est, Laboratoire Modélisation et Simulation Multi Echelle, MSME UMR 8208 CNRS, 5 bd Descartes, 77454 Marne-la-Vallée, France
| | - Arnaud Rouzée
- Max Born Institute, Max Born Strasse 2A, 12489 Berlin, Germany
| | - Emma Springate
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Harwell Oxford, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - I C Edmond Turcu
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Harwell Oxford, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - Mark J Watkins
- University of Leicester, Department of Physics & Astronomy, Leicester LE1 7RH, United Kingdom
| | - Klaus von Haeften
- University of Leicester, Department of Physics & Astronomy, Leicester LE1 7RH, United Kingdom
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31
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Petrović VS, Siano M, White JL, Berrah N, Bostedt C, Bozek JD, Broege D, Chalfin M, Coffee RN, Cryan J, Fang L, Farrell JP, Frasinski LJ, Glownia JM, Gühr M, Hoener M, Holland DMP, Kim J, Marangos JP, Martinez T, McFarland BK, Minns RS, Miyabe S, Schorb S, Sension RJ, Spector LS, Squibb R, Tao H, Underwood JG, Bucksbaum PH. Transient X-ray fragmentation: probing a prototypical photoinduced ring opening. Phys Rev Lett 2012; 108:253006. [PMID: 23004597 DOI: 10.1103/physrevlett.108.253006] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2011] [Indexed: 05/23/2023]
Abstract
We report the first study of UV-induced photoisomerization probed via core ionization by an x-ray laser. We investigated x-ray ionization and fragmentation of the cyclohexadiene-hexatriene system at 850 eV during the ring opening. We find that the ion-fragmentation patterns evolve over a picosecond, reflecting a change in the state of excitation and the molecular geometry: the average kinetic energy per ion fragment and H(+)-ion count increase as the ring opens and the molecule elongates. We discuss new opportunities for molecular photophysics created by optical pump x-ray probe experiments.
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Affiliation(s)
- Vladimir S Petrović
- Department of Physics, Stanford University, Stanford, California 94305, USA.
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32
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McKay AR, Sanz ME, Mooney CRS, Minns RS, Gill EM, Fielding HH. Development of a new photoelectron spectroscopy instrument combining an electrospray ion source and photoelectron imaging. Rev Sci Instrum 2010; 81:123101. [PMID: 21198008 DOI: 10.1063/1.3505097] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
A new apparatus has been constructed that combines electrospray ionization with a quadrupole mass filter, hexapole ion trap, and velocity-map imaging. The purpose is to record photoelectron images of isolated chromophore anions. To demonstrate the capability of our instrument we have recorded the photodetachment spectra of isolated deprotonated phenol and indole anions. To our knowledge, this is the first time that the photodetachment energy of the deprotonated indole anion has been recorded.
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Affiliation(s)
- A R McKay
- Department of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, United Kingdom
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33
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Minns RS, Kutteruf MR, Zaidi H, Ko L, Jones RR. Preserving coherence in Rydberg quantum bits. Phys Rev Lett 2006; 97:040504. [PMID: 16907558 DOI: 10.1103/physrevlett.97.040504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2006] [Indexed: 05/11/2023]
Abstract
The effectiveness of decoherence suppression schemes is explored using quantum bits (qubits) stored in Li np Rydberg states. Following laser excitation, pulsed electric fields coherently control the electronic spin-orbit coupling, facilitating qubit creation, manipulation, and measurement. Spin-orbit coupling creates an approximate decoherence-free subspace for extending qubit storage times. However, sequences of fast NOT operations are found to be substantially more effective for preserving coherence.
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Affiliation(s)
- R S Minns
- Department of Physics, University of Virginia, Charlottesville, Virginia 22904-4714, USA
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34
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Minns RS, Patel R, Verlet JRR, Fielding HH. Optical control of the rotational angular momentum of a molecular Rydberg wave packet. Phys Rev Lett 2003; 91:243601. [PMID: 14683118 DOI: 10.1103/physrevlett.91.243601] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2003] [Indexed: 05/24/2023]
Abstract
An intuitive scheme for controlling the rotational quantum state of a Rydberg molecule is demonstrated experimentally. We determine the accumulated phase difference between the various components of a molecular electron wave packet, and then employ a sequence of phase-locked optical pulses to selectively enhance or depopulate specific rotational states. The angular momentum composition of the resulting wave packet, and the efficiency of the control scheme, is determined by calculating the multipulse response of the time-dependent Rydberg populations.
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Affiliation(s)
- R S Minns
- Department of Chemistry, King's College London, Strand, London WC2R 2LS, United Kingdom
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35
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Verlet JRR, Stavros VG, Minns RS, Fielding HH. Controlling the angular momentum composition of a Rydberg electron wave packet. Phys Rev Lett 2002; 89:263004. [PMID: 12484816 DOI: 10.1103/physrevlett.89.263004] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2002] [Indexed: 05/24/2023]
Abstract
Sequences of phase-locked laser pulses have been employed to control the orbital angular momentum character of an electron wave packet, which is initially created from a superposition of s and d Rydberg series. By an intelligent choice of phase, which depends on the excitation energy and the quantum defects, we are able to selectively pump down either all or a fraction of one or other angular momentum component, and by employing multichannel quantum-defect theory we are able to analyze the quantum-state distribution in detail.
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Affiliation(s)
- J R R Verlet
- Department of Chemistry, King's College London, Strand, London WC2R 2LS, United Kingdom
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