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Sindhu S, Arockiasamy S. Synthesis, crystal structure, thermal stability and biological study of bis{(2-methoxy-6-[(E)-(propylimino)methyl]phenolato}nickel(II) complex. Heliyon 2024; 10:e24108. [PMID: 38293524 PMCID: PMC10825431 DOI: 10.1016/j.heliyon.2024.e24108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2023] [Revised: 11/21/2023] [Accepted: 01/03/2024] [Indexed: 02/01/2024] Open
Abstract
A Schiff base complex of nickel, bis{(2-methoxy-6-[(E)-(propylimino)methyl]phenolato}nickel(II) was synthesised by condensing bis(2-hydroxy-3-methoxybenzaldehyde) nickel (II) and n-propylamine in methanolic medium. Single crystal X-ray diffraction analysis of the complex revealed it to possess planar geometry with a monoclinic crystal system. The non-isothermal TG/DTA runs on this complex in a high purity (99.99 %) nitrogen environment at atmospheric pressure confirmed the absence of any coordinated water. A sharp endotherm in its DTA shows a melting temperature range of 168-171 °C. It is thermally stable up to 243 °C and decomposes in two steps, yielding NiO and carbon as residue. In addition to the methoxy group (-OCH3), infrared analysis (IR) confirmed the presence of the characteristic azomethine group (-C[bond, double bond]N-) which is also responsible for the biological action. It was further analysed by elemental analyser (C, H, N), 1H and 13C NMR as well as mass spectrometry. It showed considerable antibacterial activity towards Escherichia coli and Staphylococcus aureus when the concentration exceeds 200 μg/ml. The antifungal study shows significant inhibition with the antifungal drug imidazole as a positive control (PC). Small values of MIC, MBC/MIC indicate a lesser quantity of complex is required to inhibit the growth of micro-organisms.
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Affiliation(s)
- S. Sindhu
- Physics Division, School of Advanced Sciences, Vellore Institute of Technology, Chennai, 127, India
| | - S. Arockiasamy
- Chemistry Division, School of Advanced Sciences, Vellore Institute of Technology, Chennai, 127, India
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Roniboss A, Sindhu S, Kennedy LJ, Arockiasamy S. Synthesis and thermal properties of two novel cobalt (II) Schiff's base complexes as precursors for coating cobalt oxide (Co3O4) thin film by a Plasma Enhanced Metallo-Organic Chemical Vapour Deposition. J Mol Struct 2023. [DOI: 10.1016/j.molstruc.2022.134189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Yepuri V, Jalali S, Mudunuri V, Pothakani S, Kancharla N, Arockiasamy S. Genotyping by sequencing-based linkage map construction and identification of quantitative trait loci for yield-related traits and oil content in Jatropha (Jatropha curcas L.). Mol Biol Rep 2022; 49:4293-4306. [PMID: 35239140 DOI: 10.1007/s11033-022-07264-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Accepted: 02/14/2022] [Indexed: 10/18/2022]
Abstract
BACKGROUND Jatropha (Jatropha curcas L.) has been considered as a potential bioenergy crop and its genetic improvement is essential for higher seed yield and oil content which has been hampered due to lack of desirable molecular markers. METHODS AND RESULTS An F2 population was created using an intraspecific cross involving a Central American line RJCA9 and an Asiatic species RJCS-9 to develop a dense genetic map and for Quantitative trait loci (QTL) identification. The genotyping-by-sequencing (GBS) approach was used to genotype the mapping population of 136 F2 individuals along with the two parental lines for classification of the genotypes based on single nucleotide polymorphism (SNPs). NextSeq 2500 sequencing technology provided a total of 517.23 million clean reads, with an average of ~ 3.8 million reads per sample. We analysed 411 SNP markers and developed 11 linkage groups. The total length of the genetic map was 4092.3 cM with an average marker interval of 10.04 cM. We have identified a total of 83 QTLs for various yield and oil content governing traits. The percentage of phenotypic variation (PV) was found to be in the range of 8.81 to 65.31%, and a QTL showed the maximum PV of 65.3% for a total seed number on the 6th linkage group (LG). CONCLUSIONS The QTLs detected in this study for various phenotypic traits will lay down the path for marker-assisted breeding in the future and cloning of genes that are responsible for phenotypic variation.
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Affiliation(s)
- Vijay Yepuri
- Agronomy Division, Reliance Technology Group, Reliance Industries Ltd, Ghansoli, Navi Mumbai, 400701, India
| | - Saakshi Jalali
- Agronomy Division, Reliance Technology Group, Reliance Industries Ltd, Ghansoli, Navi Mumbai, 400701, India
| | - Vishwnadharaju Mudunuri
- Jatropha Breeding station, Reliance Industries Ltd, IDA-Peddapuram, ADB Road, Samalkota, Andhra Pradesh, 533440, India
| | - Sai Pothakani
- Jatropha Breeding station, Reliance Industries Ltd, IDA-Peddapuram, ADB Road, Samalkota, Andhra Pradesh, 533440, India
| | - Nagesh Kancharla
- Agronomy Division, Reliance Technology Group, Reliance Industries Ltd, Ghansoli, Navi Mumbai, 400701, India
| | - S Arockiasamy
- Agronomy Division, Reliance Technology Group, Reliance Industries Ltd, Ghansoli, Navi Mumbai, 400701, India.
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Yepuri V, Jalali S, Kancharla N, Reddy VB, Arockiasamy S. Development of genome wide transposable elements based repeat junction markers in Jatropha (Jatropha curcas L.). Mol Biol Rep 2020; 47:5091-5099. [PMID: 32562173 DOI: 10.1007/s11033-020-05579-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2019] [Accepted: 06/10/2020] [Indexed: 11/29/2022]
Abstract
Jatropha curcas is a potential biodiesel crop and a highly adaptable species to various agro-climatic conditions. In this study, we have utilized transposable elements' (TE) repeat junctions (RJs) which are an important constituent of the genome, used to form a genome-wide molecular marker platform owing to its use in genomic studies of plants. We screened our previously generated Jatropha hybrid genome assembly of size 265 Mbp using RJPrimers pipeline software and identified a total of 1274 TE junctions. For the predicted RJs, we designed 2868 polymerase chain reaction (PCR) based RJ markers (RJMs) flanking the junction regions. In addition to marker design, the identified RJs were utilized to detect 225,517 TEs across the genome. The different types of transposable repeat elements mainly were scattered into Retro, LTR, Copia and Gypsy categories. The efficacy of the designed markers was tested by utilizing a subset of RJMs selected randomly. We have validated 96 randomly selected RJ primers in a group of 32 J. curcas genotypes and more than 90% of the markers effectively intensified as amplicons. Of these, 10 primers were shown to be polymorphic in estimating genetic diversity among the 32 Jatropha lines. UPGMA cluster analysis revealed the formation of two clusters such as A and B exhibiting 85.5% and 87% similarity coefficient respectively. The various RJMs identified in this study could be utilized as a significant asset in Jatropha functional genomics including genome determination, mapping and marker-assisted selection.
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Affiliation(s)
- Vijay Yepuri
- Agronomy Division, Reliance Technology Group, Reliance Industries Limited, Navi Mumbai, Maharashtra, 400701, India
| | - Saakshi Jalali
- Agronomy Division, Reliance Technology Group, Reliance Industries Limited, Navi Mumbai, Maharashtra, 400701, India
| | - Nagesh Kancharla
- Agronomy Division, Reliance Technology Group, Reliance Industries Limited, Navi Mumbai, Maharashtra, 400701, India
| | - V B Reddy
- AgriGenome Labs Private Limited, Hyderabad, 500078, India
| | - S Arockiasamy
- Agronomy Division, Reliance Technology Group, Reliance Industries Limited, Navi Mumbai, Maharashtra, 400701, India.
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John PM, Arockiasamy S, Thangiah PRJ. A personalised user preference and feature based semantic information retrieval system in semantic web search. IJGUC 2018. [DOI: 10.1504/ijguc.2018.093987] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Thangiah PRJ, Arockiasamy S, John PM. A personalised user preference and feature based semantic information retrieval system in semantic web search. IJGUC 2018. [DOI: 10.1504/ijguc.2018.10015151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Johnson MG, Raj Bharath S, Arockiasamy S, Maiyalagan T, Selvakumar J, Nagaraja KS. Development and vapour pressure of metallo-organic precursors of copper for the deposition of copper thin films by a plasma-assisted MOCVD. INORG NANO-MET CHEM 2017. [DOI: 10.1080/24701556.2017.1357591] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- M. G. Johnson
- Department of Chemistry and Loyola Institute of Frontier Energy (LIFE), Loyola College, Chennai, Tamil Nadu, India
| | - S. Raj Bharath
- Department of Chemistry, School of Advanced Sciences, VIT University Chennai Campus, Chennai, Tamil Nadu, India
| | - S. Arockiasamy
- Department of Chemistry, School of Advanced Sciences, VIT University Chennai Campus, Chennai, Tamil Nadu, India
| | - T. Maiyalagan
- Department of Chemistry, SRM Research Institute, SRM University, Chennai, Tamil Nadu, India
| | - J. Selvakumar
- KNRPC, Bhabha Atomic Research Centre Facilities, Kalpakkam, Tamil Nadu, India
| | - K. S. Nagaraja
- Department of Chemistry and Loyola Institute of Frontier Energy (LIFE), Loyola College, Chennai, Tamil Nadu, India
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Chandrakala C, Sravanthi P, Raj Bharath S, Arockiasamy S, George Johnson M, Nagaraja K, Jeyaraj B. Synthesis, structure, vapour pressure and deposition of ZnO thin film by plasma assisted MOCVD technique using a novel precursor bis[(pentylnitrilomethylidine) (pentylnitrilomethylidine-μ-phenalato)]dizinc(II). J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.10.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Arockiasamy S, Manoj K, Bhadbhade M, Mallika C, Nagaraja K. Syntheses, characterisation and vapour pressure of metallo-organic titanium precursor for MOCVD applications. Inorganica Chim Acta 2010. [DOI: 10.1016/j.ica.2010.03.033] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Arockiasamy S, Ignacimuthu S. Regeneration of transgenic plants from two indica rice (Oryza sativa L.) cultivars using shoot apex explants. Plant Cell Rep 2007; 26:1745-53. [PMID: 17593368 DOI: 10.1007/s00299-007-0377-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2007] [Revised: 04/27/2007] [Accepted: 05/04/2007] [Indexed: 05/04/2023]
Abstract
We have established a reproducible procedure for transformation of shoot apices and regeneration of transgenic plants for two indica rice cultivars, white ponni (WP) and Pusa Basmathi 1 (PB 1). Four-day-old shoot apex explants were transformed by cocultivation with Agrobacterium tumefaciens strain EHA 101 harbouring a binary plasmid pRIT1. The vector contained an improved hygromycin phosphotransferase (hpt) gene for hygromycin resistance driven by actin 1 promoter and the reporter gene beta-glucuronidase intron (INT-GUS) controlled by CaMV 35S promoter. Rice shoots were induced on media containing 0.1 mg/l napthalene acetic acid (NAA), 1.0 mg/l kinetin (kn), 1.0 mg/l N(6)-benzyleaminopurin (BAP), 300 mg/l casaminoacid, 500 mg/l proline, 50 mg/l hygromycin and 500 mg/l cefotaxime. Transgenic plants were raised in pots and seeds were collected. Histochemical and polymerase chain reaction (PCR) analyses of field established transgenic rice plants and their offsprings confirmed the presence of GUS gene. Integration of T-DNA into the genome of putative transgenics was further confirmed by southern analysis. The transformation efficiency of WP was found to be ranging from 5.6 to 6.2% whereas in the case of PB1, it was from 7 to 8%. Progeny analysis of these plants showed a pattern of classical Mendelian inheritance for both hpt and GUS gene.
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Affiliation(s)
- S Arockiasamy
- Entomology Research Institute, Loyola College, Chennai 600034, India
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Arockiasamy S, Sreedharan O, Mallika C, Raghunathan V, Nagaraja K. Development, characterisation and rapid evaluation of standard enthalpies of vaporisation and fusion of volatile Bis( N-R-salicylaldimine)nickel(II) ( n-R=methyl to pentyl) complexes for its MOCVD applications. Chem Eng Sci 2007. [DOI: 10.1016/j.ces.2006.12.001] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Arockiasamy S, Rani SS, Ignacimuthu S, Melchias G. Efficient protocols for in vitro regeneration of Pennisetum glaucum (L) Br. Indian J Exp Biol 2006; 44:757-61. [PMID: 16999033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
A system was developed for in vitro regeneration of Pennisetum glaucum through organogenesis and somatic embryogenesis. Mature embryo and leaf base explants of Pennisetum glaucum (L) Br. cv HH B60 (Poaceae) were cultured on Murashige and Skoog agar medium supplemented with 11.3 microM of 2,4-D for callus induction. Embryogenic calli were induced within eight weeks. Percentage of callus induction and somatic embryogenesis was significantly higher in mature embryo than leaf base explants. Maximum shoot regeneration was obtained via organogenesis on MS medium supplemented with 4.43 microM of BAP and 4.64 microM of kinetin from the calli of both the explants. The frequency of plant regeneration through somatic embryogenesis was comparatively lower than organogenesis. Regeneration frequency was higher in mature embryo explants than leaf base explants. The shoots regenerated via organogenesis were elongated and rooted efficiently on MS medium supplemented with IBA (0.49 microM). The rooted plantlets were hardened and transferred to soil.
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Affiliation(s)
- S Arockiasamy
- Entomology Research Institute, Loyola College, Chennai, India.
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Arockiasamy S, Ignacimuthu S, Melchias G. Influence of growth regulators and explant type on in vitro shoot propagation and rooting of red sandal wood (Pterocarpus santalinus L.). Indian J Exp Biol 2000; 38:1270-3. [PMID: 11411054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/20/2023]
Abstract
In vitro shoot regeneration in Pterocarpus santalinus L. was achieved when detached cotyledons from in vitro germinated seedlings were cultured on MS medium containing NAA (0.1 mg/L), BA (1 mg/L) and kinetin (1 mg/L). The regenerated shoots rooted on 1/4 strength MS medium with IAA (1 mg/L) and the fully developed plantlets were successfully established in the soil.
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Affiliation(s)
- S Arockiasamy
- Entomology Research Institute, Loyola College, Chennai 600 034, India
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