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Yamane N, Ikeda A, Tomooka K, Saito I, Maruyama K, Eguchi E, Suyama K, Fujii A, Shiba T, Tanaka K, Kooka A, Nakamura S, Kajita M, Kawamura R, Takata Y, Osawa H, Steptoe A, Tanigawa T. Salivary Alpha-Amylase Activity and Mild Cognitive Impairment among Japanese Older Adults: The Toon Health Study. J Prev Alzheimers Dis 2022; 9:752-757. [PMID: 36281680 DOI: 10.14283/jpad.2022.51] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
BACKGROUND There is growing interest in examining objective markers for early identification and behavioral intervention to prevent dementia and mild cognitive impairment in clinical and community settings. OBJECTIVE To investigate the association between salivary alpha-amylase as an objective measure of psychological stress response and mild cognitive impairment for the implication of psychological stress in the development of mild cognitive impairment. DESIGN, SETTING, AND PARTICIPANTS This cross-sectional study involved 865 participants aged ≥ 65 years. A saliva sample was collected in the morning, and the levels of salivary alpha-amylase were assayed. Mild cognitive impairment was evaluated using the Japanese version of the Montreal Cognitive Assessment; a score < 26 was indicative of mild cognitive impairment. A multivariable logistic regression model was used to examine the association of salivary alpha-amylase and mild cognitive impairment after adjusting for age, sex, current drinking status, current smoking status, body mass index, hypertension, diabetes mellitus, physical activity, education, social support, social network, and heart rate variability. RESULTS Salivary alpha-amylase was associated with mild cognitive impairment (the multivariable-adjusted odds ratio [95% confidence interval] for the 1-standard deviation increment of log-transformed salivary alpha-amylase was 1.24 [1.07-1.44]). This significant association persisted after adjusting for various confounding factors. CONCLUSION Elevation of salivary alpha-amylase was associated with mild cognitive impairment among Japanese community-dwelling older adults. This suggests that salivary alpha-amylase is a useful objective marker of psychological stress responses associated with mild cognitive impairment.
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Affiliation(s)
- N Yamane
- Takeshi Tanigawa, MD, PhD, Department of Public Health, Juntendo University Graduate School of Medicine, 2-1-1 Hongo, Bunkyo-ku, Tokyo 113-8421, Japan. Phone: +81 (3) 5802-1049 Fax: +81 (3) 3814-0305,
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Guadilla V, Algora A, Tain JL, Estienne M, Fallot M, Sonzogni AA, Agramunt J, Äystö J, Briz JA, Cucoanes A, Eronen T, Fraile LM, Ganioğlu E, Gelletly W, Gorelov D, Hakala J, Jokinen A, Jordan D, Kankainen A, Kolhinen V, Koponen J, Lebois M, Le Meur L, Martinez T, Monserrate M, Montaner-Pizá A, Moore I, Nácher E, Orrigo SEA, Penttilä H, Pohjalainen I, Porta A, Reinikainen J, Reponen M, Rinta-Antila S, Rubio B, Rytkönen K, Shiba T, Sonnenschein V, Valencia E, Vedia V, Voss A, Wilson JN, Zakari-Issoufou AA. Large Impact of the Decay of Niobium Isomers on the Reactor ν[over ¯]_{e} Summation Calculations. Phys Rev Lett 2019; 122:042502. [PMID: 30768318 DOI: 10.1103/physrevlett.122.042502] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2018] [Revised: 11/23/2018] [Indexed: 06/09/2023]
Abstract
Even mass neutron-rich niobium isotopes are among the principal contributors to the reactor antineutrino energy spectrum. They are also among the most challenging to measure due to the refractory nature of niobium, and because they exhibit isomeric states lying very close in energy. The β-intensity distributions of ^{100gs,100m}Nb and ^{102gs,102m}Nb β decays have been determined using the total absorption γ-ray spectroscopy technique. The measurements were performed at the upgraded Ion Guide Isotope Separator On-Line facility at the University of Jyväskylä. Here, the double Penning trap system JYFLTRAP was employed to disentangle the β decay of the isomeric states. The new data obtained in this challenging measurement have a large impact in antineutrino summation calculations. For the first time the discrepancy between the summation model and the reactor antineutrino measurements in the region of the shape distortion has been reduced.
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Affiliation(s)
- V Guadilla
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - A Algora
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
- Institute of Nuclear Research of the Hungarian Academy of Sciences, Debrecen H-4026, Hungary
| | - J L Tain
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - M Estienne
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
| | - M Fallot
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
| | - A A Sonzogni
- NNDC, Brookhaven National Laboratory, Upton, New York 11973-5000, USA
| | - J Agramunt
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - J Äystö
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - J A Briz
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
| | - A Cucoanes
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
| | - T Eronen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - L M Fraile
- Universidad Complutense, Grupo de Física Nuclear and UPARCOS, CEI Moncloa, E-28040 Madrid, Spain
| | - E Ganioğlu
- Department of Physics, Istanbul University, 34134 Istanbul, Turkey
| | - W Gelletly
- Department of Physics, University of Surrey, GU2 7XH Guildford, United Kingdom
| | - D Gorelov
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - J Hakala
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - A Jokinen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - D Jordan
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - A Kankainen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - V Kolhinen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - J Koponen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - M Lebois
- Institut de Physique Nuclèaire d'Orsay, 91406 Orsay, France
| | - L Le Meur
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
| | - T Martinez
- Centro de Investigaciones Energéticas Medioambientales y Tecnológicas, E-28040 Madrid, Spain
| | - M Monserrate
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - A Montaner-Pizá
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - I Moore
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - E Nácher
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
- Instituto de Estructura de la Materia, CSIC, E-28006 Madrid, Spain
| | - S E A Orrigo
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - H Penttilä
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - I Pohjalainen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - A Porta
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
| | - J Reinikainen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - M Reponen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | | | - B Rubio
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - K Rytkönen
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - T Shiba
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
| | | | - E Valencia
- Instituto de Física Corpuscular, CSIC-Universidad de Valencia, E-46071 Valencia, Spain
| | - V Vedia
- Universidad Complutense, Grupo de Física Nuclear and UPARCOS, CEI Moncloa, E-28040 Madrid, Spain
| | - A Voss
- University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - J N Wilson
- Institut de Physique Nuclèaire d'Orsay, 91406 Orsay, France
| | - A-A Zakari-Issoufou
- Subatech, IMT-Atlantique, Université de Nantes, CNRS-IN2P3, F-44307 Nantes, France
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Estienne M, Fallot M, Giot L, Guadilla-Gomez V, Le Meur L, Porta A, Algora A, Taìn JL, Briz JA, Agramunt J, Äystö J, Cormon S, Cucoanes A, Eronen T, Fraile LM, Ganogliu E, Gelletly W, Gorelov D, Hakala J, Jokinen A, Jordan MD, Kankainen A, Kolhinen VS, Koponen J, Lebois M, Martinez T, Monserrate M, Montaner-Pizá A, Moore I, Nácher E, Orrigo SEA, Penttilä H, Pohjalainen I, Reinikainen J, Reponen M, Rinta-Antila S, Rytkönen K, Rubio B, Shiba T, Sonnenschein V, Sonzogni AA, Valencia E, Vedia V, Voss A, Weber C, Wilson JN, Zakari-Issoufou AA. Summation Calculations for Reactor Antineutrino Spectra, Decay Heat and Delayed Neutron Fractions Involving New TAGS Data and Evaluated Databases. EPJ Web Conf 2019. [DOI: 10.1051/epjconf/201921101001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Three observables of interest for present and future reactors depend on the β decay properties of the fission products: antineutrinos from reactors, the reactor decay heat and delayed neutron emission. In these proceedings, we present new results from summation calculations of the first two quantities quoted above, performed with evolved independent yields coupled with fission product decay data, from various nuclear data bases or models. New TAGS results from the latest experiment of the TAGS collaboration at the JYFL facility of Jyväskylä will be displayed as well as their impact on the antineutrino spectra and the decay heat associated to fission pulses of the main actinides.
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Takahashi M, Kasuya S, Shiba T, Terada H, Noro M. INCREASED EPICARDIAL ADIPOSE TISSUE AND ARTERIAL STIFFNESS, USING CARDIO-ANKLE VASCULAR INDEX IN SLEEP APNOEA. J Hypertens 2018. [DOI: 10.1097/01.hjh.0000539217.57781.f8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Abstract
PURPOSE The authors studied the effects of changes in packaging solution temperature on the development of glistening in acrylic intraocular lenses (AcrySof, Alcon). METHODS Glistening was examined by slit lamp at each condition. In Experiment 1, AcrySof lenses were soaked in physiologic saline adjusted to 15 degrees C and 37 degrees C in an incubator. In Experiment 2, AcrySof lenses were soaked in physiologic saline adjusted to 37 degrees C and 60 degrees C for 5 min, then stored in physiologic saline adjusted to 15 degrees C. In Experiment 3, glistening formation was induced in AcrySof lenses by soaking them in warm water (37 degrees C). The lenses were allowed to dry at 15 degrees C and then soaked in physiologic saline adjusted to 15 degrees C. After storage of dry AcrySof lenses at 37 degrees C in an incubator for 10 months followed by soaking in physiologic saline adjusted to 15 degrees C, glistening formation was evaluated in Experiment 4. RESULTS Glistening became observable after 1 month, despite the temperature having been lowered to 15 degrees C. No glistening was observed in the lenses soaked in physiologic saline adjusted to 37 degrees C after 5 min, but glistening was observed 1 month after soaking. When allowed to dry at 15 degrees C, the glistening decreased. After 1 month of soaking at 15 degrees C, glistening was again observable. CONCLUSIONS AcrySof lenses soaked in warm water for a short time may change characteristics, and therefore, close monitoring of the temperature and time of soaking is necessary to prevent glistening formation.
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Affiliation(s)
- T Shiba
- Department of Ophthalmology, Jikei University, School of Medicine, Tokyo, Japan.
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Tain J, Guadilla V, Valencia E, Algora A, Zakari-Issoufou AA, Rice S, Meur LL, Agramunt J, Äystö J, Batist L, Bowry M, Briz J, Bui V, Caballero-Folch R, Cano-Ott D, Cucoanes A, Elomaa VV, Eronen T, Estevez E, Estienne M, Fallot M, Farrelly G, Fraile L, Ganioglu E, Garcia A, Gelletly W, Gómez-Hornillos B, Gorelov D, Gorlychev V, Hakala J, Jokinen A, Jordan M, Kankainen A, Kolhinen V, Kondev F, Koponen J, Lebois M, Martínez T, Mason P, Mendoza E, Monserrate M, Montaner-Pizá A, Moore I, Nacher E, Orrigo S, Penttilä H, Podolyák Z, Pohjalainen I, Porta A, Regan P, Reinikainen J, Reponen M, Rinta-Antila S, Rissanen J, Rubio B, Rytkönen K, Shiba T, Sonnenschein V, Sonzogni A, Vedia V, Voss A, Wilson J. Strong γ-ray emission from neutron unbound states populated in β-decay: Impact on (n,γ) cross-section estimates. EPJ Web Conf 2017. [DOI: 10.1051/epjconf/201714601002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Tokimasa S, Kitahara H, Nakayama T, Fujimoto Y, Shiba T, Shikama N, Nameki M, Himi T, Fukushima K, Kobayashi Y. P3694Multicenter research of bleeding risk between low dose prasugrel and standard dose clopidogrel in patients with coronary artery disease undergoing percutaneous coronary intervention. Eur Heart J 2017. [DOI: 10.1093/eurheartj/ehx504.p3694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Yamaguchi M, Sakai N, Muraki H, Kawazoe Y, Shiba T, Manabe A, Nishino S. 0201 EFFECTS OF INTRAPERITONEAL INJECTION OF GINGKOLIDES AND BILOBALIDE ON SLEEP STUDY IN MICE. Sleep 2017. [DOI: 10.1093/sleepj/zsx050.200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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Fallot M, Porta A, Meur LL, Briz J, Zakari-Issoufou AA, Guadilla V, Algora A, Taìn JL, Valencia E, Rice S, Bui V, Cormon S, Estienne M, Agramunt J, Äystö J, Batist L, Bowry M, Caballero-Folch R, Cano-Ott D, Cucoanes A, Elomaa VV, Eronen T, Estévez E, Farrelly G, Fraile L, Fleming M, Ganogliu E, Garcia A, Gelletly W, Gomez-Hornillos M, Gorelov D, Gorlychev V, Hakala J, Jokinen A, Jordan M, Kankainen A, Karvonen P, Kolhinen V, Kondev F, Koponen J, Lebois M, Martinez T, Mason P, Mendoza E, Molina F, Monserrate M, Montaner-Pizá A, Moore I, Nácher E, Orrigo S, Penttilä H, Perez A, Podolyák Z, Pohjalainen I, Regan P, Reinikainen J, Reponen M, Rinta-Antila S, Rissanen J, Rubio B, Shiba T, Sonnenschein V, Sonzogni A, Sublet JC, Vedia V, Voss A, Weber C, Wilson J. Total absorption spectroscopy of fission fragments relevant for reactor antineutrino spectra. EPJ Web Conf 2017. [DOI: 10.1051/epjconf/201714610002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Algora A, Rice S, Guadilla V, Tain J, Valencia E, Zakari-Issoufou AA, Agramunt J, Äystö J, Batist L, Briz J, Bowry M, Bui V, Caballero-Folch R, Cano-Ott D, Cucoanes A, Eronen T, Elomaa V, Estevez E, Estienne M, Fallot M, Farrelly G, Fraile L, Fleming M, Ganioglu E, Garcia A, Gelletly W, Gómez-Hornillos B, Gorelov D, Gorlychev V, Hakala J, Jokinen A, Jordan D, Kankainen A, Kolhinen V, Kondev F, Koponen J, Lebois M, Martinez T, Mason P, Mendoza E, Monserrate M, Montaner-Pizá A, Moore I, Nácher E, Orrigo S, Penttilä H, Podolyák Z, Pohjalainen I, Porta A, Regan P, Reinikainen J, Reponen M, Rinta-Antila S, Rissanen J, Rubio B, Rytkönen K, Shiba T, Sonnenschein V, Sonzogni A, Sublet JC, Vedia V, Voss A, Wilson J. Total absorption studies of high priority decays for reactor applications: 86Br and 91Rb. EPJ Web Conf 2017. [DOI: 10.1051/epjconf/201714610001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Guadilla V, Algora A, Tain J, Agramunt J, Äystö J, Briz J, Cucoanes A, Eronen T, Estienne M, Fallot M, Fraile L, Ganioğlu E, Gelletly W, Gorelov D, Hakala J, Jokinen A, Jordan D, Kankainen A, Kolhinen V, Koponen J, Lebois M, Martinez T, Monserrate M, Montaner-Pizá A, Moore I, Nácher E, Orrigo S, Penttilä H, Pohjalainen I, Porta A, Reinikainen J, Reponen M, Rinta-Antila S, Rubio B, Rytkönen K, Shiba T, Sonnenschein V, Sonzogni A, Valencia E, Vedia V, Voss A, Wilson J, Zakari-Issoufou AA. TAGS measurements of 100Nb ground and isomeric states and 140Cs for neutrino physics with the new DTAS detector. EPJ Web Conf 2017. [DOI: 10.1051/epjconf/201714610010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Kawazoe Y, Shiba T, Nakamura R, Mizuno A, Tsutsumi K, Uematsu T, Yamaoka M, Shindoh M, Kohgo T. Induction of Calcification in MC3T3-E1 Cells by Inorganic Polyphosphate. J Dent Res 2016; 83:613-8. [PMID: 15271969 DOI: 10.1177/154405910408300806] [Citation(s) in RCA: 80] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Relatively large amounts of inorganic polyphosphate [poly(P)] (400 μM) have been found in normal osteoblasts. The effect of poly(P) with an average chain length of 65 phosphate residues on cell calcification was therefore investigated with the use of MC3T3-E1 cells. Expression of both osteopontin and osteocalcin was induced by poly(P) (0.1 ~ 1 mM), and cells treated with poly(P) were strongly stained by alizarin red. In addition, the level of alkaline phosphatase activity induced in poly(P)-treated cells was two-fold higher than that in either orthophosphate-treated or control cells but not higher than that in cells treated with β-glycerophosphate and ascorbic acid. In contrast, however, polyphosphatase activities were activated by poly(P) treatment to levels up to six-fold greater than that in controls. MC3T3-E1 cells may utilize poly(P) as a phosphate source for calcification rather than phosphate sources that are mainly produced by ALPase. Poly(P)-dependent induction of polyphosphatase activities may therefore promote calcification in MC3T3-E1 cells.
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Affiliation(s)
- Y Kawazoe
- Regenetiss Co., Ltd., 1-5-17, Akabane, Okaya, Nagano 394-0002, Japan
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Porta A, Zakari-Issoufou AA, Fallot M, Algora A, Tain J, Valencia E, Rice S, Bui V, Cormon S, Estienne M, Agramunt J, Äystö J, Bowry M, Briz J, Caballero-Folch R, Cano-Ott D, Cucouanes A, Elomaa VV, Eronen T, Estévez E, Farrelly G, Garcia A, Gelletly W, Gomez-Hornillos M, Gorlychev V, Hakala J, Jokinen A, Jordan M, Kankainen A, Karvonen P, Kolhinen V, Kondev F, Martinez T, Mendoza E, Molina F, Moore I, Perez-Cerdán AB, Podolyák Z, Penttilä H, Regan P, Reponen M, Rissanen J, Rubio B, Shiba T, Sonzogni A, Weber C. Total Absorption Spectroscopy of Fission Fragments Relevant for Reactor Antineutrino Spectra and Decay Heat Calculations. EPJ Web of Conferences 2016. [DOI: 10.1051/epjconf/201611108006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Zakari-Issoufou AA, Fallot M, Porta A, Algora A, Tain JL, Valencia E, Rice S, Bui VM, Cormon S, Estienne M, Agramunt J, Äystö J, Bowry M, Briz JA, Caballero-Folch R, Cano-Ott D, Cucoanes A, Elomaa VV, Eronen T, Estévez E, Farrelly GF, Garcia AR, Gelletly W, Gomez-Hornillos MB, Gorlychev V, Hakala J, Jokinen A, Jordan MD, Kankainen A, Karvonen P, Kolhinen VS, Kondev FG, Martinez T, Mendoza E, Molina F, Moore I, Perez-Cerdán AB, Podolyák Z, Penttilä H, Regan PH, Reponen M, Rissanen J, Rubio B, Shiba T, Sonzogni AA, Weber C. Total Absorption Spectroscopy Study of (92)Rb Decay: A Major Contributor to Reactor Antineutrino Spectrum Shape. Phys Rev Lett 2015; 115:102503. [PMID: 26382674 DOI: 10.1103/physrevlett.115.102503] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2015] [Indexed: 06/05/2023]
Abstract
The antineutrino spectra measured in recent experiments at reactors are inconsistent with calculations based on the conversion of integral beta spectra recorded at the ILL reactor. (92)Rb makes the dominant contribution to the reactor antineutrino spectrum in the 5-8 MeV range but its decay properties are in question. We have studied (92)Rb decay with total absorption spectroscopy. Previously unobserved beta feeding was seen in the 4.5-5.5 region and the GS to GS feeding was found to be 87.5(25)%. The impact on the reactor antineutrino spectra calculated with the summation method is shown and discussed.
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Affiliation(s)
- A-A Zakari-Issoufou
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - M Fallot
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - A Porta
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - A Algora
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
- Institute of Nuclear Research, MTA ATOMKI, Debrecen, 4026 Hungary
| | - J L Tain
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - E Valencia
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - S Rice
- Department of Physics, University of Surrey, Guildford GU27XH, United Kingdom
| | - V M Bui
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - S Cormon
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - M Estienne
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - J Agramunt
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - J Äystö
- Helsinki Institute of Physics, University of Helsinki, FI-00014 Helsinki, Finland
| | - M Bowry
- Department of Physics, University of Surrey, Guildford GU27XH, United Kingdom
| | - J A Briz
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | | | - D Cano-Ott
- Centro de Investigaciones Energéticas Medioambientales Y Tecnológicas, E-28040 Madrid, Spain
| | - A Cucoanes
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - V-V Elomaa
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - T Eronen
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - E Estévez
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - G F Farrelly
- Department of Physics, University of Surrey, Guildford GU27XH, United Kingdom
| | - A R Garcia
- Centro de Investigaciones Energéticas Medioambientales Y Tecnológicas, E-28040 Madrid, Spain
| | - W Gelletly
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
- Department of Physics, University of Surrey, Guildford GU27XH, United Kingdom
| | | | - V Gorlychev
- Universitat Politécnica de Catalunya (UPC), 08034 Barcelona, Spain
| | - J Hakala
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - A Jokinen
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - M D Jordan
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - A Kankainen
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - P Karvonen
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - V S Kolhinen
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - F G Kondev
- Argonne National Laboratory, Argonne, Illinois 60439, USA
| | - T Martinez
- Centro de Investigaciones Energéticas Medioambientales Y Tecnológicas, E-28040 Madrid, Spain
| | - E Mendoza
- Centro de Investigaciones Energéticas Medioambientales Y Tecnológicas, E-28040 Madrid, Spain
| | - F Molina
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - I Moore
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - A B Perez-Cerdán
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - Zs Podolyák
- Department of Physics, University of Surrey, Guildford GU27XH, United Kingdom
| | - H Penttilä
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - P H Regan
- Department of Physics, University of Surrey, Guildford GU27XH, United Kingdom
- National Physical Laboratory, Teddington, Middlesex TW11 0LW, United Kingdom
| | - M Reponen
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - J Rissanen
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
| | - B Rubio
- Instituto de Física Corpuscular (CSIC-Universitat de Valencia), Apartado Correos 22085, E-46071 Valencia, Spain
| | - T Shiba
- SUBATECH, CNRS/IN2P3, Université de Nantes, Ecole des Mines de Nantes, F-44307 Nantes, France
| | - A A Sonzogni
- National Nuclear Data Center, Brookhaven National Laboratory, Upton, New York 11973-5000, USA
| | - C Weber
- Department of Physics, University of Jyväskylä, P.O. Box 35, FI-40014 Jyväskylä, Finland
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15
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Feener EP, Xia P, Inoguchi T, Shiba T, Kunisaki M, King GL. Role of protein kinase C in glucose- and angiotensin II-induced plasminogen activator inhibitor expression. Contrib Nephrol 2015; 118:180-7. [PMID: 8744056 DOI: 10.1159/000425092] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- E P Feener
- Research Division, Joslin Diabetes Center, Boston, Mass., USA
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16
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Shiba T, Kawamura M, Kouro T, Tanaka A, Tagami M, Yamazaki T, Sakamoto K, Mori Y. Combination regimen of statin/ezetimibe and reduction of sd-LDL-C for Japanese patients with type 2 diabetes (Research, A multicenter RCT). Atherosclerosis 2014. [DOI: 10.1016/j.atherosclerosis.2014.05.776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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17
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Matsukura K, Shiba T, Sasaki T, Yoshida K, Matsumura M. Dynamics of Neotyphodium uncinatum
and N
-formylloline in Italian ryegrass, and their relation to insect resistance in the field. J Appl Microbiol 2013; 116:400-7. [DOI: 10.1111/jam.12374] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2013] [Revised: 10/15/2013] [Accepted: 10/21/2013] [Indexed: 11/30/2022]
Affiliation(s)
- K. Matsukura
- Agro-Environment Research Division; NARO Kyushu Okinawa Agricultural Research Center; Koshi Kumamoto Japan
| | - T. Shiba
- Plant Protection Division; NARO Agricultural Research Center; Tsukuba Ibaraki Japan
| | - T. Sasaki
- Forage Grass Laboratory; Forage Crop Research Institute; Japan Grassland Agriculture & Forage Seed Association; Nasushiobara Tochigi Japan
| | - K. Yoshida
- Agro-Environment Research Division; NARO Kyushu Okinawa Agricultural Research Center; Koshi Kumamoto Japan
| | - M. Matsumura
- Agro-Environment Research Division; NARO Kyushu Okinawa Agricultural Research Center; Koshi Kumamoto Japan
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18
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Balogun EO, Balogun JB, Yusuf S, Inuwa HM, Ndams IS, Sheridan P, Inaoka DK, Shiba T, Harada S, Kita K, Esievo KAN, Nok AJ. Anemia amelioration by lactose infusion during trypanosomosis could be associated with erythrocytes membrane de-galactosylation. Vet Parasitol 2013; 199:259-63. [PMID: 24238624 DOI: 10.1016/j.vetpar.2013.10.013] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2013] [Revised: 10/16/2013] [Accepted: 10/19/2013] [Indexed: 12/28/2022]
Abstract
African trypanosomosis is a potentially fatal disease that is caused by extracellular parasitic protists known as African trypanosomes. These parasites inhabit the blood stream of their mammalian hosts and produce a number of pathological features, amongst which is anemia. Etiology of the anemia has been partly attributed to an autoimmunity-like mediated erythrophagocytosis of de-sialylated red blood cells (dsRBCs) by macrophages. Lactose infusion to infected animals has proven effective at delaying progression of the anemia. However, the mechanism of this anemia prevention is yet to be well characterized. Here, the hypothesis of a likely induced further modification of the dsRBCs was investigated. RBC membrane galactose (RBC m-GAL) and packed cell volume (PCV) were measured during the course of experimental trypanosomosis in mice infected with Trypanosoma congolense (stb 212). Intriguingly, while the membrane galactose on the RBCs of infected and lactose-treated mice (group D) decreased as a function of parasitemia, that of the lactose-untreated infected group (group C) remained relatively constant, as was recorded for the uninfected lactose-treated control (group B) animals. At the peak of infection, the respective cumulative percent decrease in PCV and membrane galactose were 30 and 185 for group D, and 84 and 13 for group C. From this observed inverse relationship between RBCs membrane galactose and PCV, it is logical to rationalize that the delay of anemia progression during trypanosomosis produced by lactose might have resulted from an induction of galactose depletion from dsRBCs, thereby preventing their recognition by the macrophages.
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Affiliation(s)
- E O Balogun
- Department of Biochemistry, Ahmadu Bello University, Zaria 2222, Nigeria; Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan; Department of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Sakyo-ku, Kyoto 606-8585, Japan.
| | - J B Balogun
- Department of Biological Sciences, Federal University Dutse, P.M.B. 7156, Dutse, Jigawa State, Nigeria
| | - S Yusuf
- Department of Physiology, Faculty of Biomedical Sciences, Kampala International University, Uganda
| | - H M Inuwa
- Department of Biochemistry, Ahmadu Bello University, Zaria 2222, Nigeria
| | - I S Ndams
- Department of Biological Sciences, Ahmadu Bello University, Zaria 2222, Nigeria
| | - P Sheridan
- Laboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan
| | - D K Inaoka
- Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - T Shiba
- Department of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Sakyo-ku, Kyoto 606-8585, Japan
| | - S Harada
- Department of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Sakyo-ku, Kyoto 606-8585, Japan
| | - K Kita
- Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - K A N Esievo
- Department of Veterinary Pathology and Microbiology, Ahmadu Bello University, Zaria 2222, Nigeria
| | - A J Nok
- Department of Biochemistry, Ahmadu Bello University, Zaria 2222, Nigeria
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19
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Balogun EO, Inaoka DK, Shiba T, Kido Y, Nara T, Aoki T, Honma T, Tanaka A, Inoue M, Matsuoka S, Michels PA, Harada S, Kita K. Biochemical characterization of highly active Trypanosoma brucei gambiense glycerol kinase, a promising drug target. J Biochem 2013; 154:77-84. [DOI: 10.1093/jb/mvt037] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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20
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Muramatsu Y, Kamegai A, Shiba T, Shrestha P, Takai Y, Mori M, Ilg E, Schafer B, Heizmann C. Histochemical characteristics of calcium binding S100 proteins and bone morphogenetic proteins in chondro-osseous tumors. Oncol Rep 2012; 4:49-53. [PMID: 21590010 DOI: 10.3892/or.4.1.49] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
Abstract
Immunohistochemical distribution of the Ca2+ binding proteins S100A1, S100A2, S100A4, S100A6, S100B, and bone morphogenetic protein (BMP) in chondro-osseous tumors and lesions, both benign and malignant, was investigated using specific anti S100 protein and BMP antibodies. Chondrogenic tumor cells of chondro-osseous lesions were characterized by the presence of marked staining for S100B and BMP, while they were only faintly reactive for S100A1, S100A2, S100A4 and S100A6. Dense fibrous connective tissue in osseous tumor and ossifying fibroma showed moderate immunoreactivity for S100A1, S100A4 and BMP. Immunoreactivity of S100A2, prominent in epidermal basal cells and associated or homologous cells of epidermal tumors or skin appendages tumors, was not found in cartilage and bone forming cells. Biological roles of S100B in chondroid cells may involve Ca2+-signaling in precalcified tissue, cytoskeletal protein organization and matrix formation since glycosaminoglycan synthesis is mediated by calcium ions. S100B positive cells in chondro-osseous structures also strongly expressed BMP. The present study allowed us to conclude that among the S100 proteins, the S100B in particular and S100A1, S100A4 and S100A6 but not S100A2 may be involved in the process of tumorigenesis of chondro-osseous tumors and BMP may have an important role in the chondroid and osseous differentiation. The detailed biological role of S100 proteins in chondro-osseous tumors is under investigation.
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Affiliation(s)
- Y Muramatsu
- ASAHI UNIV,SCH DENT,DEPT ORAL & MAXILLOFACIAL SURG,GIFU 50102,JAPAN. UNIV ZURICH,DEPT PEDIAT,DIV CLIN CHEM,CH-8032 ZURICH,SWITZERLAND
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Shimizu H, Osanai A, Sakamoto K, Inaoka DK, Shiba T, Harada S, Kita K. Crystal structure of mitochondrial quinol-fumarate reductase from the parasitic nematode Ascaris suum. J Biochem 2012; 151:589-92. [DOI: 10.1093/jb/mvs051] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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22
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Shiba T, Yoneyama M, Ogita K. [JSNP Excellent Presentation Award for AsCNP 2011: involvement of Ca(2+) channels in proliferation of neural stem/progenitor cells derived from the subventricular zone of adult mice]. Nihon Shinkei Seishin Yakurigaku Zasshi 2012; 32:123-124. [PMID: 22708274] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
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23
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Nonaka T, Inamori M, Kessoku T, Ogawa Y, Imajyo K, Yanagisawa S, Shiba T, Sakaguchi T, Nakajima A, Maeda S, Atsukawa K, Takahashi H. Acute obstructive cholangitis caused by an enterolith in a duodenal diverticulum. Endoscopy 2010; 42 Suppl 2:E204-5. [PMID: 20845273 DOI: 10.1055/s-0030-1255704] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- T Nonaka
- Department of Gastroenterology, Hiratsuka City Hospital, Hiratsuka, Japan
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24
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Morita K, Doi K, Kubo T, Takeshita R, Kato S, Shiba T, Akagawa Y. Enhanced initial bone regeneration with inorganic polyphosphate-adsorbed hydroxyapatite. Acta Biomater 2010; 6:2808-15. [PMID: 20056175 DOI: 10.1016/j.actbio.2009.12.055] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2009] [Revised: 12/23/2009] [Accepted: 12/30/2009] [Indexed: 10/20/2022]
Abstract
Inorganic polyphosphate (poly(P)) can promote binding between fibroblast growth factors and their receptors and enhance osteoblastic cell differentiation and calcification. This study evaluated the possibilities for poly(P) adsorbed onto interconnected porous calcium hydroxyapatite (IP-CHA) as a new bone regeneration material. Prepared 1%, 5%, 25% and 50% poly(P)/IP-CHA composites showed the elution peak of poly(P) between 15 and 20 min, respectively, with the highest value from 50% poly(P)/IP-CHA in vitro. Histologically, at 1 week of placement into the femur of rabbits, granulation tissue had penetrated into the pores in all composites and IP-CHA as a control. In contrast, at 2 weeks of placement, newly formed lamellar bone was found in all groups, although a higher amount of bone regeneration was obviously formed in the 25% and 50% poly(P)/IP-CHA with a significantly higher value of bone regeneration ratio of 50% poly(P)/IP-CHA. These results indicate that 25% and 50% poly(P)/IP-CHA composites may enhance initial bone regeneration.
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Abstract
Sixteen strains of aerobic bacteria which contain bacteriochlorophyll a were isolated from the samples collected in aerobic marine environments: thalli of Enteromorpha linza, Porphyra sp., Sargussum horneri; beach sand; and the surface seawater from Aburatsubo Inlet. When they occurred, their proportions among the aerobic heterotrophic populations ranged from 0.9 to 1.1% in the seaweed samples and from 1.2 to 6.3% in the beach sand samples and were 0.9% in the seawater sample. The results suggested that the aerobic photopigmented bacteria widely inhabit aerobic marine environments.
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Affiliation(s)
- T Shiba
- Otsuchi Marine Research Center, Ocean Research Institute, University of Tokyo, Akahama, Otsuchi, Iwate, 028-11 Japan
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26
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Kaneko H, Takagi S, Hara A, Kobayashi I, Kaburagi S, Suzuki T, Shiba T, Tsugu Y. Retrieval of liver specimen in laparoscopic hepatectomy. MINIM INVASIV THER 2009. [DOI: 10.3109/13645709609153256] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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27
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Yuan Q, Kubo T, Doi K, Morita K, Takeshita R, Katoh S, Shiba T, Gong P, Akagawa Y. Effect of combined application of bFGF and inorganic polyphosphate on bioactivities of osteoblasts and initial bone regeneration. Acta Biomater 2009; 5:1716-24. [PMID: 19251495 DOI: 10.1016/j.actbio.2009.01.034] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2008] [Revised: 12/29/2008] [Accepted: 01/24/2009] [Indexed: 01/09/2023]
Abstract
Basic fibroblast growth factor (bFGF) and inorganic polyphosphate (poly(P)) have been recognized as therapeutic agents that enhance bone regeneration. It has also been shown that poly(P) may enhance the mitogenic activity of bFGF. The purpose of this study is to evaluate the combined effect of bFGF and poly(P) on bioactivities of osteoblasts and initial bone regeneration in vitro and in vivo. MC3T3-E1 cells were treated with bFGF, poly(P) or bFGF+poly(P), then subjected to cell proliferation assay, alkaline phosphatase (ALP) activity measurement, quantitative real-time reverse transcription-polymerase chain reaction and Alizarin S Red staining. In an in vivo study, bFGF-, poly(P)- and bFGF+poly(P)-modified interconnected porous hydroxyapatite (IPHA) complexes were fabricated, and placed into the femurs of rabbits to evaluate new bone formation histologically and histomorphometrically. The highest enhancement of cell proliferation were observed in those treated with bFGF+poly(P) on days 5 and 7. Cells treated with bFGF+poly(P) also exhibited increased ALP activity on days 5 and 10, up-regulated mRNA levels of osteocalcin and osteopontin, and enhanced calcification when compared to the non-treated cells. In vivo, the highest bone formation ratio was observed in bFGF+poly(P)-modified IPHA complexes. This study indicated that co-application of bFGF and poly(P) may provide enhanced bone formation by modulating cell proliferation and the mineralization process. It is anticipated that a combined application of bFGF and poly(P) can provide a novel method for bone regeneration in clinical use.
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28
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Okada E, Yoshimoto S, Ikeda N, Kanda H, Tamura K, Shiba T, Takamatsu N, Ito M. Xenopus W-linked DM-W induces Foxl2 and Cyp19 expression during ovary formation. Sex Dev 2009; 3:38-42. [PMID: 19339816 DOI: 10.1159/000200080] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2008] [Accepted: 01/19/2009] [Indexed: 11/19/2022] Open
Abstract
The molecular mechanisms of vertebrate ZZ/ZW-type sex-determining systems remain unclear. We recently indicated that a W-linked gene, DM-W is a likely ovary-determining gene in Xenopus laevis. We first examined whether Cyp19 for estrogen-synthesizing enzyme P450 aromatase and Foxl2 showed female-specific expression in developing gonads. Both genes showed much higher expression in ZW than in ZZ gonads during and after sex determination. Importantly, transgenic ZZ gonads expressing exogenous DM-W at the sex-determining stage showed a ZW-type pattern of Cyp19 and Foxl2 expression. These results suggest that DM-W up-regulates Cyp19 and Foxl2 expression to guide primary ovary development in X. laevis.
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Affiliation(s)
- E Okada
- Department of Biosciences, School of Science, Kitasato University, Sagamihara, Kanagawa, Japan
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29
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Narikawa R, Muraki N, Shiba T, Kurisu G, Ikeuchi M. Novel crystal structure of red-absorbing form of cyanobacteriochrome AnPixJ-GAF2. Acta Crystallogr A 2008. [DOI: 10.1107/s0108767308089642] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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30
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Muraki N, Nomata J, Shiba T, Fujita Y, Kurisu G. Structure of protochlorophyllide reductase reveals a mechanism for greening in the dark. Acta Crystallogr A 2008. [DOI: 10.1107/s0108767308090703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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31
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Inaoka D, Nayoung L, Sakamoto K, Shimizu H, Shiba T, Kurisu G, Nara T, Aoki T, Inoue M, Kita K, Harada S. Trypanosoma cruziDHOD structure-based design of 5-halogen and 5-alkyl orotate derivatives. Acta Crystallogr A 2008. [DOI: 10.1107/s0108767308092866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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32
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Shiba T, Muraki N, Seo D, Sakurai T, Kurisu G. Crystallographic studies of ferredoxin-NAD(P)+ reductase from Chlorobium tepidum. Acta Crystallogr A 2008. [DOI: 10.1107/s010876730809140x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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33
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Leroux Les Jardins S, Leroux Les Jardins G, Shiba T, Poisson F. 239 Presbylasik multifocal : résultats après 1 an et facteurs influençant les bons résultats. J Fr Ophtalmol 2008. [DOI: 10.1016/s0181-5512(08)70836-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Yoshida M, Ida M, Nguyen T, Stievenart J, Istoc A, Shiba T, Boucard C, Habas C, Kitahara K, Iba-Zizen M, Cabanis E, Tsuneoka H. 357 Évaluation en IRM en séquence de tenseur de diffusion (DTI) et en IRM fonctionnelle (IRMf) de l’hémianopsie par atteinte partielle des radiations optiques. J Fr Ophtalmol 2008. [DOI: 10.1016/s0181-5512(08)70955-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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35
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Hacchou Y, Uematsu T, Ueda O, Usui Y, Uematsu S, Takahashi M, Uchihashi T, Kawazoe Y, Shiba T, Kurihara S, Yamaoka M, Furusawa K. Inorganic polyphosphate: a possible stimulant of bone formation. J Dent Res 2007; 86:893-7. [PMID: 17720862 DOI: 10.1177/154405910708600917] [Citation(s) in RCA: 64] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Inorganic polyphosphates [Poly(P)] are often distributed in osteoblasts. We undertook the present study to verify the hypothesis that Poly(P) stimulates osteoblasts and facilitates bone formation. The osteoblast-like cell line MC 3T3-E1 was cultured with Poly(P), and gene expression and potential mineralization were evaluated by reverse-transcription polymerase chain-reaction. Alkaline phosphatase activity, von Kossa staining, and resorption pit formation analyses were also determined. The potential role of Poly(P) in bone formation was assessed in a rat alveolar bone regeneration model. Poly(P) induced osteopontin, osteocalcin, collagen 1alpha, and osteoprotegerin expression and increased alkaline phosphatase activity in MC 3T3-E1 cells. Dentin slice pit formation decreased with mouse osteoblast and bone marrow macrophage co-cultivation in the presence of Poly(P). Promotion of alveolar bone regeneration was observed locally in Poly(P)-treated rats. These findings suggest that Poly(P) plays a role in osteoblastic differentiation, activation, and bone mineralization. Thus, local poly(P) delivery may have a therapeutic benefit in periodontal disease.
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Affiliation(s)
- Y Hacchou
- Department of Oral and Maxillofacial Surgery, Matsumoto Dental University School of Dentistry, Nagano, Japan
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36
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Shiba T, Yoshida M, Nguyen T, Iba Zizen M, Stievenart J, Ohno K, Noda T, Leroux-Les-Jardins S, Cabanis E, Kitahara K. 201 Évaluation de l’influence de la chirurgie réfractive sur le signal de cortex visuel : étude en IRM fonctionnelle (2e rapport). J Fr Ophtalmol 2007. [DOI: 10.1016/s0181-5512(07)80013-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Kikuchi S, Tanaka H, Shiba T, Mii M, Tsujimoto H. Genome size, karyotype, meiosis and a novel extra chromosome in Torenia fournieri, T. baillonii and their hybrid. Chromosome Res 2006; 14:665-72. [PMID: 16964573 DOI: 10.1007/s10577-006-1077-y] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2006] [Revised: 05/01/2006] [Accepted: 05/01/2006] [Indexed: 11/25/2022]
Abstract
Torenia is a suitable model plant to study plant fertilization because of its protruding embryo sac. However, information on the genomes and chromosomes of this species is limited. We determined the genome sizes of T. fournieri Linden and T. baillonii Godefr as 1.71 pg x 10(8) bp and 1.67 x 10(8) bp, respectively. The small genome size of these species suggests their superiority as the targets for molecular cloning studies. Furthermore, karyotypes of T. fournieri and T. baillonii were determined using FISH probed with 5S rDNA, 45S rDNA and species-specific centromere repetitive sequences. Although the two species have similar genome size, number of chromosomes, centromere repeats and 5S rDNA loci were varied. Observation of meiosis in the F(1) hybrid revealed that all chromosomes except one of T. fournieri paired well with the chromosomes of T. baillonii throughout the entire length of the chromosomes including species-specific centromeric regions. One exceptional chromosome of T. fournieri behaved as a univalent and was not always required for gametogenesis. The present results provide the basis for the molecular genetics in Torenia.
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Affiliation(s)
- S Kikuchi
- Laboratory of Plant Genetics and Breeding Science, Faculty of Agriculture, Tottori University, 680-8553 Tottori, Japan
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Kameda A, Shiba T, Kawazoe Y, Satoh Y, Ihara Y, Munekata M, Ishige K, Noguchi T. A novel ATP regeneration system using polyphosphate-AMP phosphotransferase and polyphosphate kinase. J Biosci Bioeng 2005; 91:557-63. [PMID: 16233039 DOI: 10.1263/jbb.91.557] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2001] [Accepted: 03/09/2001] [Indexed: 11/17/2022]
Abstract
Polyphosphate-AMP phosphotransferase (PAP) and polyphosphate kinase (PPK) were used for designing a novel ATP regeneration system, named the PAP-PPK ATP regeneration system. PAP is an enzyme that catalyzes the phospho-conversion of AMP to ADP, and PPK catalyzes ATP formation from ADP. Both enzymes use inorganic polyphosphate [poly(P)] as a phosphate donor. In the PAP-PPK ATP regeneration system, ATP was continuously synthesized from AMP by the coupling reaction of PAP and PPK using poly(P). Poly(P) is a cheap material compared to acetyl phosphate, phosphoenol pyruvate and creatine phosphate, which are phosphate donors used for conventional ATP regeneration systems. To achieve efficient synthesis of ATP from AMP, an excessive amount of poly(P) should be added to the reaction solution because both PAP and PPK consume poly(P) as a phosphate donor. Using this ATP generation reaction, we constructed the PAP-PPK ATP regeneration system with acetyl-CoA synthase and succeeded in synthesizing acetyl-CoA from CoA, acetate and AMP. Since too much poly(P) may chelate MG2+ and inhibit enzyme activity, the Mg2+ concentration was optimized to 24 mM in the presence of 30 mM poly(P) in the reaction. In this reaction, ATP was regenerated 39.8 times from AMP, and 99.5% of CoA was converted to acetyl-CoA. In addition, since the PAP-PPK ATP regeneration system can regenerate GTP from GMP, it could also be used as a GTP regeneration system.
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Affiliation(s)
- A Kameda
- Division of Molecular Chemistry, Graduate School of Engineering, Hokkaido University, Sapporo 060-8628, Japan
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Kawasaki M, Shiba T, Shiba Y, Yamaguchi Y, Matsugaki N, Igarashi N, Suzuki M, Kato R, Kato K, Nakayama K, Wakatsuki S. Molecular mechanism of ubiquitin recognition by GGA3 GAT domain. Acta Crystallogr A 2005. [DOI: 10.1107/s0108767305092433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Yamaoka M, Hashimoto M, Sugiura M, Matsuura T, Shiba T, Uematsu T, Furusawa K. Overeruption without root exposure of third molars and periodontal health in the mandible. Clin Oral Investig 2005; 9:192-6. [PMID: 15940543 DOI: 10.1007/s00784-005-0314-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2004] [Accepted: 03/14/2005] [Indexed: 11/25/2022]
Abstract
Bone formation is seen around the third molar even when the tooth is exposed to the oral environment due to overeruption. To determine if overeruption of the third molar with or without root exposure is related to the status of the exposure of other teeth in the mandible, using orthopantomographs, 424 third molars were studied in 371 patients who were over 41 years of age. The rate of overeruption and root exposure in third molars was measured, and its relationship to the number of teeth lost and the rate of root exposure in other teeth in the mandible was analyzed. Tooth loss in the group of third molars with overeruption without root exposure was greater than in that without overeruption or root exposure in men, whereas the relationship was not seen in women. We found that root exposures of other teeth in the group of third molars with overeruption without root exposure were significantly smaller than in those with root exposure in both genders. Third molars with overeruption without root exposure, in which bone formation was easy to observe for radiographic diagnosis, were correlated with periodontal health in the mandible, suggesting a component of precision determination for predicting resistance to periodontitis.
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Affiliation(s)
- M Yamaoka
- Department of Oral and Maxillofacial Surgery, Matsumoto Dental University School of Dentistry, Shiojiri, Nagano 399-0781, Japan.
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Cabanis E, Iba Zizen M, Nguyen T, Abanou A, Bellinger L, Yoshida M, Shiba T. 012 Stratum sagittal externe et radiations optiques : contribution de la tractographie en IRM (TD). J Fr Ophtalmol 2005. [DOI: 10.1016/s0181-5512(05)74408-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Yoshida M, Ida M, Nguyen T, Stievenart J, Iba Zizen M, Bellinger L, Nagao T, Shiba T, Kitahara K, Cabanis E. 013 Évaluation longitudinale en IRM en séquence de tenseur de diffusion et IRM fonctionnelle dans un cas d’infarctus cérébral aigu. J Fr Ophtalmol 2005. [DOI: 10.1016/s0181-5512(05)74409-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Uchida A, Higa K, Shiba T, Yoshimori S, Kuwashima F, Iwasawa H. Generalized synchronization of chaos in He-Ne lasers. Phys Rev E Stat Nonlin Soft Matter Phys 2003; 68:016215. [PMID: 12935233 DOI: 10.1103/physreve.68.016215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2002] [Revised: 04/28/2003] [Indexed: 05/24/2023]
Abstract
We experimentally demonstrate synchronization of chaos in one-way coupled He-Ne lasers with optical feedback. We observe different types of synchronization such as identical synchronization, inverse synchronization, and random amplification. These dynamics are maintained only for a short duration of several hundred milliseconds. We also observe generalized synchronization of chaos by using one master and two slave lasers. The generalized synchronization is achieved for a long duration of tens of seconds under injection locking. The generalized synchronization is always maintained while the injection locking is achieved.
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Affiliation(s)
- A Uchida
- Department of Electronics and Computer Systems, Takushoku University, 815-1 Tatemachi, Hachioji, Tokyo 193-0985, Japan
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Lin L, Wisor J, Shiba T, Taheri S, Yanai K, Wurts S, Lin X, Vitaterna M, Takahashi J, Lovenberg TW, Koehl M, Uhl G, Nishino S, Mignot E. Measurement of hypocretin/orexin content in the mouse brain using an enzyme immunoassay: the effect of circadian time, age and genetic background. Peptides 2002; 23:2203-11. [PMID: 12535700 DOI: 10.1016/s0196-9781(02)00251-6] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The hypocretins (1 and 2) have emerged as key regulators of sleep and wakefulness. We developed a high-throughput enzyme immunoassay (EIA) to measure total brain hypocretin levels from large numbers of mice. Hypocretin levels were not altered by circadian time or age. However, significant differences in one or both hypocretin peptides were observed between different mouse strains. We studied hypocretin levels in knockout and transgenic mouse models with obesity, circadian gene mutations or monoaminergic defects. Compared to controls, only histamine receptor knockouts had lower hypocretin levels. This was most pronounced in H1 receptor knockouts suggesting the existence of a positive feedback loop between hypocretin and histaminergic neurons.
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Affiliation(s)
- L Lin
- Department of Psychiatry and Behavior Sciences, Center for Narcolepsy and Sleep Disorder, Stanford University, Palo Alto, CA 94304-5742, USA
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Takagi S, Kaneko H, Ishii T, Tamura A, Yamazaki K, Yoshino M, Tsuchiya M, Joubara N, Otuka Y, Shiba T. Laparoscopic hepatectomy for extrahepatic growing tumor. Surgical strategy based on extrahepatic growing index. Surg Endosc 2002; 16:1573-8. [PMID: 12072996 DOI: 10.1007/s00464-001-9205-4] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2001] [Accepted: 02/22/2002] [Indexed: 11/27/2022]
Abstract
BACKGROUND This article describes the operative procedures, varying difficulties, and required instrumentation for performing laparoscopic hepatectomy (LH) on the basis of a lesion's extrahepatic growing (EG) index, as calculated by computed tomography (CT). METHODS Laparoscopic partial hepatectomy cases were divided into the following two groups: an EG tumor group (n = 11) and an intrahepatic tumor group (n = 8). The surgical procedures, operative results, and laparoscopic instrumentation for these two groups were compared based on the EG index (/cm2; maximum diameter of tumor pedicle/maximum vertical diameter of tumor/area of the tumor). RESULTS The mean operative time was significantly shorter and the mean blood loss was significantly less in the EG tumor group than in the intrahepatic tumor group. In addition, in the EG tumor group, there were significant differences in mean operative time and mean blood loss related to the values associated with the EG index (p <0.05, P <0.01). The selection of laparoscopic instruments was based on the EG index, as follows: (a) lesions with an EG index >5/cm2 underwent resection in combination with a microwave tissue coagulator and an ultrasonic surgical aspirator (13 cases, including intrahepatic tumor cases); (b) lesions with an EG index of 5-15/cm2 underwent resection in combination with a microwave tissue coagulator and laparosonic coagulating shears (four cases); (c) lesions with an EG index <%15/cm2 underwent resection with a laparoscopic linear stapler (two cases). CONCLUSION Our preliminary experience leads us to believe that it is useful to calculate the EG index by CT scan before formulating the technical strategy for a subsequent LH procedure.
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Affiliation(s)
- S Takagi
- Second Department of Surgery, Toho University, School of Medicine, 6-11-1, Omori-nishi, Ota-ku, Tokyo 143-8541, Japan.
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Shinohara Y, Ezura Y, Iwasaki H, Nakazawa I, Ishida R, Nakajima T, Kodaira M, Kajita M, Shiba T, Emi M. Three TNFalpha single nucleotide polymorphisms in the Japanese population. Ann Hum Biol 2002; 29:579-83. [PMID: 12396377 DOI: 10.1080/03014460110116444] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
BACKGROUND Tumour necrosis factor-alpha (TNFalpha) is an essential regulator of immune responses and is implicated to relate to several types of disease susceptibilities. Population information on polymorphisms is essential for the study of genetic diseases. AIM To obtain accurate information about single nucleotide polymorphisms (SNPs) in the TNFalpha gene in the Japanese population. SUBJECTS AND METHODS The entire TNFalpha gene was screened for SNPs by directly sequencing 48 chromosomes derived from 24 unrelated Japanese individuals. Allele frequencies of each polymorphism were determined and compared with those previously reported in other populations. RESULTS Three SNPs, -308G/A at nt -308, IVS1 + 125G/A at nt 492 and IVS3 + 104G/A at nt 1359 were observed, of which one (IVS3 + 104G/A at nt 1359) was novel. In addition, allele frequencies of -308G/A were remarkably different from those presented in the NCBI dbSNP, indicating a significant ethnic difference. CONCLUSIONS The polymorphisms and allele frequencies obtained in this study will be useful for genetic studies of common diseases such as osteoporosis and rheumatoid arthritis in the Japanese population.
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Affiliation(s)
- Y Shinohara
- Department of Molecular Biology, Institute of Gerontology, Nippon Medical School, 1-396 Kosugi-cho, Nakahara-ku, Kawasaki 211-8533, Japan
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Shiba T, Ozu M, Yoshida Y, Mignot E, Nishino S. Hypocretin stimulates [(35)S]GTP gamma S binding in Hcrtr 2-transfected cell lines and in brain homogenate. Biochem Biophys Res Commun 2002; 294:615-20. [PMID: 12056812 DOI: 10.1016/s0006-291x(02)00521-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In vitro functional analyses of hypocretin/orexin receptor systems were performed using [(125)I]hypocretin radioreceptor and hypocretin-stimulated [(35)S]GTP gamma S binding assay in cell lines expressing human or canine (wild-type and narcoleptic-mutation) hypocretin receptor 2 (Hcrtr 2). Hypocretin-2 stimulated [(35)S]GTP gamma S binding in human and canine Hcrtr 2 expressing cell lines, while cell lines expressing the mutated canine Hcrtr 2 did not exhibit specific binding for [(125)I]hypocretin or hypocretin-stimulated [(35)S]GTP gamma S. In rat brain homogenates, regional specific hypocretin-stimulated [(35)S]GTP gamma S binding was also observed. Hypocretin-stimulated [(35)S]GTP gamma S binding, may thus be a useful functional assay for hypocretin receptors in both cell lines and brain tissue homogenates.
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Affiliation(s)
- T Shiba
- Center for Narcolepsy, Stanford University, 701B Welch Rd., Palo Alto, CA 94304, USA
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48
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Iwasaki H, Shinohara Y, Ezura Y, Ishida R, Kodaira M, Kajita M, Nakajima T, Shiba T, Emi M. Thirteen single-nucleotide polymorphisms in the human osteopontin gene identified by sequencing of the entire gene in Japanese individuals. J Hum Genet 2002; 46:544-6. [PMID: 11558904 DOI: 10.1007/s100380170037] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Osteopontin (OPN) is one of the major noncollagenous bone matrix proteins produced by osteoblasts and osteoclasts. We systematically surveyed the entire structure of the OPN gene for single-nucleotide polymorphisms (SNPs) by directly sequencing 48 alleles derived from 24 unrelated Japanese individuals. We identified 13 SNPs in the OPN gene. Ten polymorphisms were identified in introns 1, 3, and 5; 2 in the coding region of exons 6 and 7; and 1 in the 3' untranslated region of exon 7. Allele frequencies for some of the polymorphisms were significantly different from those reported in the United States National Center for Biotechnology Information (NCBI) dbSNP database. These polymorphisms will be useful in genetic studies to evaluate the role of OPN proteins in bone metabolism.
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Affiliation(s)
- H Iwasaki
- Department of Molecular Biology, Institute of Gerontology, Nippon Medical School, Kawasaki, Japan
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Shinohara Y, Ezura Y, Iwasaki H, Nakazawa I, Ishida R, Kodaira M, Kajita M, Shiba T, Emi M. Linkage disequilibrium and haplotype analysis among ten single-nucleotide polymorphisms of interleukin 11 identified by sequencing of the gene. J Hum Genet 2002; 46:494-7. [PMID: 11501950 DOI: 10.1007/s100380170052] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
Interleukin (IL11) is a member of the interleukin 6 (IL6)-related cytokine subfamily, which stimulates T cell-dependent development of immunoglobulin-producing B cells. IL11 is also an important paracrine regulator of bone metabolism that induces formation of osteoclasts. In the work reported here, we sequenced the entire IL11 structural gene of 48 alleles in a Japanese test population. These experiments identified ten single-nucleotide polymorphisms (SNPs) and determined their allelic frequencies. One polymorphism was identified upstream of exon 1, one in exon 3, four in intron 4 and four in the 3' untranslated region (3'UTR) of exon 5. Based on the genotype data, we constructed six haplotypes in the tested population. Two-way comparisons of SNPs revealed two combinations in complete linkage disequilibrium, one with SNPs at nucleotide positions 2753, 3644, 5154, and 5568, and another with SNPs at positions 3686, 5141, and 5734. These results will be useful in disease-association studies where a contribution of the human IL11 gene has been suspected, especially in disorders affecting immune response and bone metabolism.
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Affiliation(s)
- Y Shinohara
- Department of Molecular Biology, Institute of Gerontology, Nippon Medical School, Kawasaki, Japan
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50
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Tajima K, Nakajima K, Yamashita H, Shiba T, Munekata M, Takai M. Cloning and sequencing of the beta-glucosidase gene from Acetobacter xylinum ATCC 23769. DNA Res 2001; 8:263-9. [PMID: 11853314 DOI: 10.1093/dnares/8.6.263] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The beta-glucosidase gene (bglxA) was cloned from the genomic DNA of Acetobacter xylinum ATCC 23769 and its nucleotide sequence (2200 bp) was determined. This bglxA gene was present downstream of the cellulose synthase operon and coded for a polypeptide of molecular mass 79 kDa. The overexpression of the beta-glucosidase in A. xylinum caused a tenfold increase in activity compared to the wild-type strain. In addition, the action pattern of the enzyme was identified as G3ase activity. The deduced amino acid sequence of the bglxA gene showed 72.3%, 49.6%, and 45.1% identity with the beta-glucosidases from A. xylinum subsp. sucrofermentans, Cellvibrio gilvus, and Mycobacterium tuberculosis, respectively. Based on amino acid sequence similarities, the beta-glucosidase (BglxA) was assigned to family 3 of the glycosyl hydrolases.
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Affiliation(s)
- K Tajima
- Division of Molecular Chemistry, Graduate School of Engineering, Hokkaido University, Sapporo, Japan.
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