Molecular detection and antibiogram of Shiga toxin-producing Escherichia coli (STEC) from raw milk in and around Bahir Dar town dairy farms, Ethiopia

Illnesses associated with consuming infected milk and milk products are a widespread problem in low and middle-income countries. Shiga toxin-producing Escherichia coli (STEC) is a bacterium commonly found in raw milk and causes foodborne diseases ranging from mild diarrhea to severe hemorrhagic colitis and hemolytic uremic syndrome. This study aimed to investigate the virulence gene and antimicrobial resistance profiles of Shiga toxin-producing E. coli strains isolated from raw milk in dairy farms in and around Bahir Dar town. Raw milk samples (n = 128) collected from December 2021 to July 2022 were cultured, and E. coli strains were isolated using standard methods. Shiga toxin-producing E. coli strains were identified genotypically by the presence of the virulence markers using a single-plex polymerase chain reaction. The antibiotic susceptibility testing of Shiga toxin-producing E. coli isolates was done by the agar disk diffusion method. In total, 32 E. coli isolates were recovered from milk samples from lactating animals. PCR screening of these isolates resulted in 19 (59.3%) positives for Shiga toxin-producing E. coli. The stx2 gene was detected in 53% of cases, followed by stx1 (31%) and eae (16%. The STEC isolates were highly sensitive to ciprofloxacin (94.7%) and kanamycin (89.5%), while exhibiting significant resistance to amoxicillin (89.5%) and streptomycin (73.7%). The present study points out the occurrence of virulent and antibiotic-resistant Shiga toxin-producing E. coli strains in raw milk that could pose a potential risk to public health. Further analysis by whole genome sequencing is necessary for an in-depth assessment and understanding of their virulence and resistance factors. Moreover, large-scale studies are needed to identify the prevalence and potential risk factors and to prevent the spread of antibiotic-resistant STEC strains in the milk production chain.

Seroprevalence and associated risk factors of peste des petits ruminants among ovine and caprine in selected districts of Afar region, Ethiopia

BACKGROUND

A Peste des petits ruminant is an acute, highly contagious and economically important transboundary viral disease of small ruminants. Despite the fact that food and agriculture organization and world organization for animal health plan to eradicate the disease by 2030, some studies indicated an increasing seropositivity of PPR infection in sheep and goats in Ethiopia. A cross-sectional study was employed to estimate the seroprevalence of PPR and to assess risk factors during the study period, February to April, 2020. Following purposive selection of the study districts, simple random sampling technique was employed to select individual animal during sample collection. A total of 384 serum samples were collected from apparently healthy sheep and goats. Competitive Enzyme Linked Immunosorbent Assay was used to detect the presence of antibodies against PPR at national veterinary institute. Descriptive statistics, Pearson's chi-square (X²) and logistic regression analysis were used is this study.

RESULTS

The overall animal level seroprevalence of PPR virus was found to be 60.15% (n = 231/384) and species level prevalence rate was found to be 38.18% (n = 42) in sheep and 68.98% (n = 189) in goats in the study areas. Among the associated risk factors considered; species, sex, age and herd sizes were significantly associated (P < 0.05) with the disease occurrence. Among the associated risk factors considered in this study, species, sex, age and herd size were found to be statistically associated with the seropositivity of PPR infection.

CONCLUSION

The present study finding revealed that a higher seroprevalence of PPR virus infection and this confirms peste des petits ruminant virus is circulating in Afar region. Further studies should be carried out on the entire region to determine PPR seroprevalence and to develop appropriate control and eradication strategies of PPR disease.

Seroprevalence and Associated Risk Factors of Lumpy Skin Disease of Cattle in Selected Districts of Afar Region, Ethiopia

Background

Lumpy skin disease (LSD) is one of Ethiopia's most economically significant transboundary livestock illnesses. The disease has a significant economic impact on pastoral household livestock owners, who rely significantly on their cattle as a source of income.

Methods

A cross-sectional study was undertaken in selected districts of Afar region from November 2018 to May 2019 primarily intended to estimate the prevalence of lumpy skin disease serologically in local Afar cattle as well as identify potential associated factors. A multistage sampling method was employed to select study districts, peasant association, herd size and study units. A total of 384 sera were processed using serum neutralization test (SNT) method to detect antibodies against lumpy skin disease virus. Relevant data were refined and further analyzed using stata version 14.

Results

In the study districts, the overall animal level seroprevalence was found to be 7.6% (N = 29/384; 95% confidence interval: 4.90-10.20) and the overall herd level prevalence was found to be 20.8% (n = 15/72; 95% confidence interval: 11.42-30.18). Only district was shown to be statistically significant (P = 0.004) in terms of LSD occurrence among the relevant factors studied. Cattle in Chifra district were 20.18 times more likely to contract LSD infection than cattle in Dubti district, when Asayita district was used as the reference group.

Conclusion

The present study finding confirmed the presence of the disease in the study districts of afar region and coordinated intervention set to be in place.

Isolation, identification and antimicrobial susceptibility profile of Salmonella isolated from poultry farms in Addis Ababa, Ethiopia

Background

Salmonella has been found to be the major cause of foodborne diseases and a serious public health problem in the world, with an increasing concern for the emergence and spread of antimicrobial‐resistant strains.

Method

A cross‐sectional study was conducted on poultry and poultry farms in Addis Ababa from February 2016 to April 2016 to determine the occurrence and evaluate the antimicrobial susceptibility profile of Salmonella isolates. A total of 200 samples consisting of the cloacal swab (n = 168), pooled litter (n = 12), hand swab (n = 8), pooled feed and water (n = 12) were collected separately from six poultry farms. The samples were examined for the presence of Salmonella through culturing on bacteriological media. Descriptive statistics, Pearson's Chi‐square (X²) and bivariate logistic regression were used in the analysis of the data. Accordingly, out of 200 samples, 23 (11.50%) were Salmonella positive, of which 21(12.50%) were in cloacal swab and 2(16.67%) in the pooled litter. There was no statistical association between the bacteriological status of sample type and Salmonella positivity (X² = 3.07, P = 0.545). However, there was a statistical association between farms and the rate of Salmonella isolation (X² = 22.21, P ≤ 0.00). The antimicrobial susceptibility testing for Salmonella isolates was conducted following the Kirby–Bauer disc diffusion method (1961).

Results

Out of 23 samples tested, 95.65% of them were resistant to at least one or more antimicrobials. Multiple drug resistances were observed for 69.56% of Salmonella isolates. The highest resistance (73.9%) was observed in kanamycin followed by tetracycline (65.2%) and streptomycin (56.3%). gentamycin was the most effective antibiotic (95.7%; sensitivity) followed by ciprofloxacin (78.3% sensitivity) and ampicillin (69.6% sensitivity.

Conclusion

This current study finding indicated that further detailed epidemiological and molecular studies are essential on the frequency and sources of acquisition of resistant genes.

Salmonellosis is an infectious and economically important disease of humans and animals caused by different Salmonella species.

Seroprevalence of bovine foot and mouth disease (FMD) and its associated risk factors in selected districts of Afar region, Ethiopia

BACKGROUND

A cross-sectional study was conducted from November 2018 to May 2019 to estimate seroprevalence of foot and mouth disease virus for cattle and assess associated risk factors in selected districts of afar region. Simple random sampling technique was employed to select the study areas. A total of 384 bovine sera were collected from 72 herds and seroprevalence of the disease was determined using 3ABC-ELISA technique. Data were recorded and coded using Microsoft Excel spread sheet and analysed using STATA. Potential risk factors of the disease were also assessed using logistic regression analysis.

RESULTS

Out of 384 sera tested at National Veterinary Institute, the overall seroprevalence of foot and mouth disease (FMD) virus was 19.8% (n = 76; 95% CI = 15.8-23.79) at animal level and 56.94% at herd level. The herd level seroprevalence was higher in animals tested from Dubti (85%, n = 17) than Asayita (48.13%, n = 13) and Chifra (44%, n = 11). Among the associated risk factors, age, herd size, district and contact with wild life were statistically associated with foot and mouth disease serostatus (p < 0.05). Medium and large herd size animals were 2.49 (95% CI: 1.33-6.63) and 6.05 (95% CI: 2.54-14.43) times more likely to develop the disease as compared to animals from small herd size, respectively.

CONCLUSIONS

The current study finding revealed that FMD was more prevalent and economically significant disease in the study districts. Hence, further studies ought to be conducted to estimate the region wise serostatus magnitude of the disease, to assess its economic impact and to identify the circulating serotypes and strains in the areas.

Contagious bovine pleuropneumonia: Seroprevalence and its associated risk factors in selected districts of Afar region, Ethiopia

BACKGROUND

In pastoral and lowland areas of the country particularly in Afar region, studies suggested higher prevalence of contagious bovine pleuropneumonia (CBPP) than mid and highland agro-ecologies. Though CBPP is a prime constraint to cattle productivity in the region, research outputs pertaining to CBPP are unavailable compared to highland areas. Thus, the objectives of the current study were to determine seroprevalence of CBPP and assess risk factors in selected districts of Afar region.

METHODS

A cross-sectional study was conducted on cattle aged 6 months and above from February 2018 to January 2019 in selected districts of the region. A total of 420 blood samples were collected and sera were separated for further serologic analysis. Using competitive enzyme linked immunosorbent assay (c-ELISA), antibodies against Mycoplasma mycoides subspecies mycoides small colony (MmmSc) were detected at National Veterinary Institute, Ethiopia. Data were analysed using Stata version 14.0.

RESULT

Of 420 samples tested by c-ELISA, 158 samples were found to be positive for CBPP providing an overall seroprevalence of 37.6%. Among the three risk factors considered (age, sex and district) assessed, only two (age and district) were found to be associated significantly with the disease (p < 0.05) at 95% CI and p-value less than 5% applying logistic regression.

CONCLUSION

The study has revealed a higher prevalence of CBPP over the study areas urging a coordinated act to be set in place.