Whole Genome Sequencing and Pan-Genomic Analysis of Multidrug-Resistant Vibrio cholerae VC01 Isolated from a Clinical Sample

Cholera, a disease caused by the Vibrio cholerae bacteria, threatens public health worldwide. The organism mentioned above has a significant historical record of being identified as a prominent aquatic environmental pollutant capable of adapting its phenotypic and genotypic traits to react to host patients effectively. This study aims to elucidate the heterogeneity of the sporadic clinical strain of V. cholerae VC01 among patients residing in Silvasa. The study involved conducting whole-genome sequencing of the isolate obtained from patients exhibiting symptoms, including those not commonly observed in clinical practice. The strain was initially identified through a combination of biochemical analysis, microscopy, and 16s rRNA-based identification, followed by type strain-based identification. The investigation demonstrated the existence of various genetic alterations and resistance profiles against multiple drugs, particularly chloramphenicol (catB9), florfenicol (floR), oxytetracycline (tet(34)), sulfonamide (sul2), and Trimethoprim (dfrA1). The pan-genomic analysis indicated that 1099 distinct clusters were detected within the genome sequences of recent isolates worldwide. The present study helps to establish a correlation between the mutation and the coexistence of antimicrobial resistance toward current treatment.

Short communications The 2022 outbreak and the pathobiology of the coxsackie virus [hand foot and mouth disease] in India

Outbreaks of HFMD in children aged <5 years have been reported worldwide and the major causative agents are Coxsackievirus (CV) A16, enterovirus (EV)-A71 and recently CVA6. In India, HFMD is a disease that is not commonly reported. The purpose of the study was to identify the enterovirus type(s) associated with large outbreak of Hand, foot, and mouth disease during COVID-19 pandemic in 2022. Four hundred and twenty five clinical samples from 196-suspected cases were collected from different parts of the country. This finding indicated the emergence of CVA6 in HFMD along with CVA16, soon after the gradual easing of non-pharmaceutical interventions during-pandemic COVID-19 and the relevance of continued surveillance of circulating enterovirus types in the post-COVID pandemic era.

Icariin attenuates isoproterenol-induced cardiac toxicity in Wistar rats via modulating cGMP level and NF-κB signaling cascade

Icariin, a major component of Epimedium species, was evaluated using isoproterenol (ISO)-induced cardiotoxicity in Wistar rats. Rats were treated with icariin at the doses of 1, 5, and 10 mg kg^-1 orally for 15 days. Afterward, rats were administered with ISO (85 mg kg^-1, subcutaneous) on 14th and 15th day to produce cardiac injury. Sildenafil (0.7 mg kg^-1, intraperitoneal) was used as a positive reference to compare the effects of icariin. ISO-treated rats showed significant changes in hemodynamic parameters. Elevated levels of cardiac troponin T, nitric oxide, and tumor necrosis factor-alpha in serum, positive expression of nuclear factor-kappa B (NF-κB) and inducible nitric oxide synthase in cardiac tissue, and a decrease in serum level of interleukin-10, manifested inflammation and associated cardiac injury. However, pretreatment with icariin and sildenafil significantly prevented the hemodynamic fall and showed improved contractile and lusitropic states. Furthermore, pretreatment groups also showed a reversal of other toxicity markers to normal. Additionally, pretreatment with icariin and sildenafil significantly increased the myocardial cyclic guanosine monophosphate (cGMP) levels. Our results thus indicated the potential role of icariin in the restoration of the ISO-induced cardiac toxicity and restored membrane integrity through modulation of cGMP and NF-κB signaling.

Leptospira in the different ecological niches of the tribal union territory of India

INTRODUCTION

Leptospirosis is a widespread zoonotic disease, which has a medical and veterinary importance, and also a commonly re-emerging infectious disease. The main causes of transmission are known; however, the respective prominence of each of the components and the respective environmental risk factors are obscure.

METHODOLOGY

Present study was conducted in the different locations (urban/rural/tribal) of the union territory of Dadra and Nagar Haveli (UT of Dadra and Nagar Haveli). Periodical sample collection approach was used to collect the samples from May 2016 to April 2017, to determine the persistence of leptospiral contamination of the environmental sources.

RESULTS

The PCR detection and isolation of Leptospira revealed that pathogenic leptospires were present in water, soil and animal urine. The highest positivity was reported from the water of household drainage in urban areas and in the water from rice field of rural areas.

CONCLUSIONS

The data obtained from the present study may help and guiding in developing preventive measures for leptospirosis in the UT of Dadra and Nagar Haveli.

Circulation of dengue serotypes in the Union Territory of Dadra & Nagar Haveli (India)

The presence of chronological infection by the multi serotype of dengue virus (DENV) is a major contributing factor for the induction of Dengue Hemorrhagic Fever (DHF) and Dengue Shock Syndrome (DSS). The results indicate that all serotype of dengue along with concurrent infection were reported from the third smallest Union Territory of India furthermore, rare serotype DENV 4, gradually spreads in new areas of India. Therefore, a need to understand the epidemiology of locally circulating serotype and accordingly the control strategy can be implemented. The study was conducted during 2014-2017 in the Union Territory of Dadra & Nagar Haveli (India).

Entomological indicators during transmission season of dengue in Silvassa (India)

The entomological surveillance was conducted in urban, semi-urban/slum, industrial and residential areas during main transmission period from June to November 2012. In residential sites house index was 41.7-35.0, breteau index 71.7-136.7 and container index 11.6-20.2. During transmission period all the values ware much higher than the threshold level. The causes of high values of entomological indicator appeared to be rapid industrialization, unawareness of the conditions or factors that can exacerbate mosquito breeding, water storage habits in community and un-implementation of health related legislation.

Occurrence of Hyalomma, (Acari: Ixodidae) Koch, 1844 on domestic animal in the Union Territory of Dadra & Nagar Haveli, Indian

In response to recent outbreak of Crimean-Congo hemorrhagic fever (CCHF) in Gujarat (India). This investigation was carried out in order to determine the risk of CCHF. The prevalence and abundance of Hyalomma (Acari: Ixodidae) were recorded on the domestic animals in the Union territory of Dadra & Nagar Haveli during the period of January to December 2012. Overall, 71 larva and 148 adults belonging to three species of Hyalomma viz., Hyal. anatolicum anatolicum, Hyal. detritum, and Hyal. marginatum isaaci were collected from 33 infested domestic mammals (Goats, Cows, Buffalos, Dogs and Cats). The infestation of Hyal. a. anatolicum and Hyal. m. isaaci (incriminated as the vector of CCHF virus) on cattles in these area may serious implication for human health, considering the fact that these ticks serve as vectors of CCHF. To minimize these dangers, strategic surveillance and control methods could be useful in the control of ticks recorded during the survey.

[Apoptosis and differentiation in presumptive neural retina and presumptive retinal pigmented epithelium during early eye development in toad, Bufo raddei Strauch]

Apoptosis and differentiation in presumptive neural retina (PNR) and presumptive retinal pigmented epithelium (PRPE) wert investigated during early retina development of toad, Bufo raddei Strauch. TUNEL staining was used to evaluate apoptotic cells and the immunohistochemistry was used to assess the expression levels ofglial fibrillary acidic protein (GFAP), RT97 and tyrosinase (Tyr) during early eye development respectively. The density of apoptotic cells and protein expression were quantitated with Image-Pro Plus 6.0. Apoptosis was found in both PNR and PRPE and the density of apoptotic profiles in PRPE was higher than that in PNR (most P<0.01) at the same stage during early eye development. The expression levels of GFAP and RT97 changed from low to high in PNR, but from high to low in PRPE, whereas the expression level of Tyr, was contrary to those of GFAP and RT97 in both PNR and PRPE. The point of intersection of these, increase and decrease respectively was found at 5-6 h after formation of optic vesicle (FOV). PRPE becomes thinner than PNR, one of the reasons might be due to higher density of apoptosis in PRPE than that in PNR during early eye development. Molecular differentiation, however, occurred after the contact of the optic vesicle outer wall with the overlying ectoderm which promotes the expression of specific molecules and inhibits the expression of non-specific molecules in PNR and PRPE respectively.

Feeding and reproductive behaviour of pigeon slender louse, Columbicola columbae (Phthiraptera, Insecta, Ischnocera)

Columbicola columbae, the pigeon slender louse mostly feeds upon the barbules of feathers but in addition to this it also feeds upon skin scurf, epidermal scales, sheaths of growing feathers, pellicle of skin etc. C. columbae is exclusively keratin feeder and does not take host blood. Any sex or stage related difference in feeding habit has not been recorded. It neither harbours any triturating agent in the crop nor is involved in cannibalism or predation. C. columbae exhibits sub-feminal mating behaviour (i.e., the male is under the female). Completecopulation lasts about 10 hours. The louse prefers the wing and tail feathers for oviposition. The eggs are generally laid on the ventral surface of the first row of undercoverts of wing feathers. Every event that takes place prior to eclosion of nymph, the time required for detachment of operculum and the freeing of nymph has been noted during hatching.

Percutaneous interventions below the knee in patients with critical limb ischemia using drug eluting stents

AIM

Midterm technical and clinical evaluation of stent angioplasty with drug-eluting stents in infrapopliteal lesions in patients with critical limb ischemia (CLI).

METHODS

Percutaneous stent angioplasty was performed in 128 limbs in 114 patients presenting with 320 vascular lesions. Lesions with up to 6 cm in length and at least one patent vessel below the obstruction were treated; 341 drug-eluting Cypher(R) stents (diameter of 2.5-3.5 mm; length of 18-33 mm) were implanted. Follow-up examinations were performed up to 18 months postinterventionally using clinical examination, ankle-brachial index (ABI) calculation, and color coded Duplex sonography. Patency rates were calculated on the basis of the Kaplan-Meier life-table analysis.

RESULTS

Technical success was achieved in 99.06%. Minor complications (hematoma, distal emboli, and vessel dissection) were documented in 8.77% of the patients. The 6, 12, and 18 months primary patency rate as controlled by Duplex sonography was 89.8, 84.2 and 83.3%, respectively; 77.6% of the lesions healed postinterventionally. The cumulative limb salvage rate was 95.6%.

CONCLUSION

Drug-eluting stent (DES) angioplasty in infrapopliteal arteries is a safe and effective technique for the treatment of patients with CLI. The use of a DES results in favorable technical and clinical outcome in the midterm follow-up.

Population characteristics and the nature of egg shells of two Phthirapteran species parasitizing Indian cattle egrets

The prevalence, intensities of infestation, range of infestation and population composition of two phthirapteran species, Ardeicola expallidus Blagoveshtchensky (Phthiraptera: Philopteridae) and Ciconiphilus decimfasciatus Boisduval and Lacordaire (Menoponidae) on seventy cattle egrets were recorded during August 2004 to March 2005, in India. The frequency distribution patterns of both the species were skewed but did not correspond to the negative binomial model. The oviposition sites, egg laying patterns and the nature of the eggs of the two species were markedly different.

A survey of phthirapteran ectoparasites on the Grey Francolin, Francolinus Pondicerianus (Galliformes: phasianidae) in North-India

As many as 144 brown francolin (Francolinus pondicerianus) were netted from 6 sites of Uttarakhand during the period from October, 2006 to September, 2008, to note the occurrence of phthirapteran species. Out of 144 birds, 45.83% were found to be infested with two species of lice i.e. Menacanthus kalatitar and Goniocotes jirufi, the former species occurring in 29.17% of birds (mean intensity 11.45 and sample mean abundance 3.34) whereas the later infesting only 25.69% of birds (mean intensity 8.22 and sample mean abundance 2.11). Significant positive correlation existed between mean monthly lice index and mean monthly temperature as well as photoperiod, while negative correlation was seen with respect to relative humidity and rainfall.

Targeting of specific domains of diphtheria toxin by site-directed antibodies

Antibodies highly selective for two functionally distinct regions of diphtheria toxin (DTx) were prepared using synthetic peptide conjugates as immunogens. Three peptides were selected for synthesis: sequence DTx141-157 on fragment A, which contains the putative protein elongation factor (EF-2) ADP-ribosyltransferase site; DTx224-237 on fragment B, selected on the basis of forming a predicted surface loop; and DTx513-526 on fragment B, forming a part of the region containing the putative receptor binding domain. All of the anti-peptide antibodies recognized the corresponding peptide, and also reacted with the toxin, specifically with the fragment containing the sequence against which they were raised, confirming the utility of this approach in generating fragment-specific antibodies. The anti-peptide antibody with the highest binding titre both to the peptide and to the native toxin was the one prepared against the sequence with the highest surface and loop likelihood indices of the three peptides selected. The similarity of the reactivity profiles with peptide and native and denatured toxin is consistent with the prediction that the region selected occurs in a surface loop and that the structure of the peptide is similar to the conformation of this region in the native protein. The epitopes for two of the anti-peptide antibodies were mapped. The results indicated that even though the antisera were raised to peptides containing 14 amino acids (aa) they were directed predominantly against a narrow region within the peptide, consisting of only 5-6 aa residues.(ABSTRACT TRUNCATED AT 250 WORDS)