Isolation of cadmium-resistance and siderophore-producing endophytic bacteria and their potential use for soil cadmium remediation

Endophyte-assisted phytoremediation is an emerging technique for soil heavy metals (HMs) remediation and has become a research focus in the world because of the benefits of endophytes on plant growth and uptake of HMs. In this study, multifunctional endophytic bacteria strains were isolated and screened, and the feasibility of these strains for soil cadmium (Cd) remediation was investigated by soil incubation experiments and pot experiments. All endophytic bacteria were isolated from the roots of woody plants grown on Cd-contaminated soil. Seven endophytic bacteria strains had capacities to tolerate Cd toxicity and produce siderophores, and sequence analysis of the 16S rRNA gene classified these strains as belonging to the genera Burkholderia, Pseudomonas, Pantoea, and Herbaspirillum. All strains were able to produce hydroxamate siderophores (32.40%-91.49%) and had three or more plant growth promoting properties such as phosphorus solubilization, nitrogen fixation, indole acetic acid and 1-aminocyclopropane-1-carboxylate deaminase production. They were all strongly resistant to Cd2+ toxicity, with the minimum inhibitory concentration in LB medium ranging from 1.5 mM to 9.0 mM. Except for strain Burkholderia contaminans JLS17, other strains showed decreasing removal rates within continuously elevated Cd2+ concentration of 10-100 mg L-1. Compared with the uninoculated treatment, the inoculation of strains B.contaminans JLS17, Pseudomonas lurida JLS32, and Pantoea endophytica JLS50 effectively increased the concentration of acid-soluble Cd and decreased the concentration of reducible, oxidizable, and residual Cd in the soils of different Cd contamination levels. In pot experiments, inoculation of strains JLS17 and YTG72 significantly (p < 0.05) promoted the growth of above-ground parts and root system of slash pine (Pinus elliottii) under Cd stress. This study provides a valuable biological resource for endophyte-assisted phytoremediation and a theoretical basis for the application of endophytic bacteria for remediation of Cd-contaminated soil.

Vanadium-resistant endophytes modulate multiple strategies to facilitate vanadium detoxification and phytoremediation in Pteris vittata

Vanadium (V) contamination of soils poses potential risks to humans and ecosystems. This study was conducted to evaluate the effects of endophyte-assisted phytoremediation and to determine the mechanisms involved in V detoxification and plant growth promotion. Results showed that the endophytic bacterium Serratia marcescens PRE01 could successfully colonize the roots and increase the total V uptake of Pteris vittata by 25.4 %, with higher plant biomass and V accumulation in roots. Endophyte inoculation significantly improved the secretion of phytic, malic, and oxalic acids and accelerated FeVO₄ dissolution and subsequent Fe and V uptake in the rhizosphere. Under V stress without inoculation, V removed by shoot uptake, root uptake, and root surface adsorption accounted for 21.76 %, 42.14 %, and 30.93 % of the total V removal efficiency, respectively. To detoxify excess V, PRE01 effectively strengthened the adsorption of V on the root surface, with an increase in its contribution to the total V removal efficiency from 30.93 % to 38.10 %. Furthermore, beneficial endophytes could alleviate oxidative damage caused by V stress by reinforcing the plant antioxidant system and promoting V(V) reduction in root tissues. These findings clearly reveal that inoculation with endophytes is a promising method for modulating multiple strategies to enhance the phytoremediation of V-contaminated soils.

Effects of endophytes inoculation on rhizosphere and endosphere microecology of Indian mustard (Brassica juncea) grown in vanadium-contaminated soil and its enhancement on phytoremediation

We investigated the effects of endophytes inoculation on ecological factors such as root morphology, rhizosphere soil properties, heavy metal speciation, and rhizosphere and endophytic bacterial communities and their role on phytoremediation. Indian mustards were grown for two months in V-contaminated soil with three treatments (control, inoculation with Serratia PRE01 or Arthrobacter PRE05). Inoculation with PRE01 and PRE05 increased organic matter content by 6.94% and 4.6% respectively and significantly increased bioavailability of heavy metals in rhizosphere soils. Despite the endophyte inocula failed to flourish as stable endophytes, they significantly affected the specific composition and diversity of endophytic bacterial communities in roots, with no significant effect on rhizosphere bacterial communities. The test strains could greatly increase plant growth promotion-related biomarkers in the endosphere, especially those associated with Pseudomonas and Microbacterium genera. PICRUSt analysis predicted high relative abundances of functional genes related to environmental information processing especially in the endophytic microbiota. More biomass production (12.0%-17.4%) and total metals uptake (24.2%-32.0%) were acquired in inoculated treatments. We conclude that endophyte PRE01 or PRE05 inoculation could effectively enhance phytoremediation of V-contaminated soil by improving the rhizosphere and endosphere microecology without causing any ecological damage.

Identification and characterization of plant growth-promoting endophyte RE02 from Trifolium repens L. in mining smelter

Endophyte-assisted phytoremediation is considered to be an effective approach for bioremediation of heavy metal-contaminated soil; however, few information is available on Trifolium repens L. and its endophytes to remediate heavy metal-polluted soils. In this study, heavy metal-resistant endophytes were isolated from T. repens growing in mining smelter and identified by BIOLOG system. The isolate was also evaluated for promoting plant growth in heavy metal-contaminated soils in pot experiments. A total of eight Cd²⁺-resistant endophytes were isolated and these isolates preferred to grow on L-aspartic acid and α-D-glucose. All the isolates had at least two plant growth-promoting properties including siderophore production, phosphate solubilization activity, indole acetic acid (IAA) production, and 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity. Strain RE02, identified as Pseudomonas putida by Biolog system, showed the highest Cd tolerance and could reduce Cd concentration from 20 to 1.84 mg L^-1 in about 49 h in liquid medium, amounting to about 90.8%. Among the five endophytes which have positive effect on the growth of T. repens, RE02, whose IAA production ability was 7.06 mg L^-1 and phosphate solubilization was 134.76 mg L^-1, could improve T. repens root and shoot biomass by 25.9% and 37.7% in cadmium-contained soil, respectively. Our research may provide a new microbial-enhanced phytoremediation of heavy metal-polluted soils and improve the remediation efficiency.

Isolation of vanadium-resistance endophytic bacterium PRE01 from Pteris vittata in stone coal smelting district and characterization for potential use in phytoremediation

This study investigates the V-resistant endophytic bacteria isolated from V-accumulator Pteris vittata grown on stone coal smelting district. Among all the ten isolates, the strain PRE01 identified as Serratia marcescens ss marcescens by Biolog GEN III MicroPlate™ was screened out by ranking first in terms of heavy metal resistance and plant growth promoting traits. The S. marcescens PRE01 had strong V, Cr and Cd resistance especially for V up to 1500mg/L. In addition, it exhibited ACC deaminase activity, siderophore production and high indoleacetic acid production (60.14mg/L) and solubilizing P potential (336.41mg/L). For heavy metal detoxification tests, PRE01 could specifically assimilate 97.6%, 21.7% and 6.6% of Cd(II), Cr(VI) and V(V) within 72h incubation. Despite the poor absorption of the two anions, most V(V) and Cr(VI) were detoxified and reduced to lower valence states by the strain. Furthermore, the isolate had the potential to facilitate the metals uptake of their hosts by changing heavy metal speciation. Our research may open up further scope of utilizing the endophyte for enhancing phytoextraction of vanadium industry contaminated soils.