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Salazar Marcano DE, Lentink S, Chen JJ, Anyushin AV, Moussawi MA, Bustos J, Van Meerbeek B, Nyman M, Parac-Vogt TN. Supramolecular Self-Assembly of Proteins Promoted by Hybrid Polyoxometalates. Small 2024:e2312009. [PMID: 38213017 DOI: 10.1002/smll.202312009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2023] [Indexed: 01/13/2024]
Abstract
Controlling the formation of supramolecular protein assemblies and endowing them with new properties that can lead to novel functional materials is an important but challenging task. In this work, a new hybrid polyoxometalate is designed to induce controlled intermolecular bridging between biotin-binding proteins. Such bridging interactions lead to the formation of supramolecular protein assemblies incorporating metal-oxo clusters that go from several nanometers in diameter up to the micron range. Insights into the self-assembly process and the nature of the resulting biohybrid materials are obtained by a combination of Small Angle X-ray Scattering (SAXS), Transmission Electron Microscopy (TEM), and Dynamic Light Scattering (DLS), along with fluorescence, UV-vis, and Circular Dichroism (CD) spectroscopy. The formation of hybrid supramolecular assemblies is determined to be driven by biotin binding to the protein and electrostatic interactions between the anionic metal-oxo cluster and the protein, both of which also influence the stability of the resulting assemblies. As a result, the rate of formation, size, and stability of the supramolecular assemblies can be tuned by controlling the electrostatic interactions between the cluster and the protein (e.g., through varying the ionic strength of the solution), thereby paving the way toward biomaterials with tunable assembly and disassembly properties.
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Affiliation(s)
| | - Sarah Lentink
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, Leuven, 3001, Belgium
| | - Jieh-Jang Chen
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, Leuven, 3001, Belgium
| | | | - Mhamad Aly Moussawi
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, Leuven, 3001, Belgium
| | - Jenna Bustos
- Department of Chemistry, Oregon State University, Corvallis, OR, 97331, USA
| | - Bart Van Meerbeek
- Department of Oral Health Sciences, BIOMAT & UZ Leuven, Dentistry, KU Leuven, Kapucijnenvoer 7, Leuven, 3000, Belgium
| | - May Nyman
- Department of Chemistry, Oregon State University, Corvallis, OR, 97331, USA
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Salazar Marcano D, Savić ND, Abdelhameed SAM, de Azambuja F, Parac-Vogt TN. Exploring the Reactivity of Polyoxometalates toward Proteins: From Interactions to Mechanistic Insights. JACS Au 2023; 3:978-990. [PMID: 37124292 PMCID: PMC10131212 DOI: 10.1021/jacsau.3c00011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 01/31/2023] [Accepted: 02/01/2023] [Indexed: 05/03/2023]
Abstract
The latest advances in the study of the reactivity of metal-oxo clusters toward proteins showcase how fundamental insights obtained so far open new opportunities in biotechnology and medicine. In this Perspective, these studies are discussed through the lens of the reactivity of a family of soluble anionic metal-oxo nanoclusters known as polyoxometalates (POMs). POMs act as catalysts in a wide range of reactions with several different types of biomolecules and have promising therapeutic applications due to their antiviral, antibacterial, and antitumor activities. However, the lack of a detailed understanding of the mechanisms behind biochemically relevant reactions-particularly with complex biological systems such as proteins-still hinders further developments. Hence, in this Perspective, special attention is given to reactions of POMs with peptides and proteins showcasing a molecular-level understanding of the reaction mechanism. In doing so, we aim to highlight both existing limitations and promising directions of future research on the reactivity of metal-oxo clusters toward proteins and beyond.
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Wang C, Yan J, Chen S, Liu Y. High-Valence Metal-Organic Framework Materials Constructed from Metal-Oxo Clusters: Opportunities and Challenges. Chempluschem 2023; 88:e202200462. [PMID: 36790800 DOI: 10.1002/cplu.202200462] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 02/14/2023] [Accepted: 02/15/2023] [Indexed: 02/16/2023]
Abstract
Metal-organic framework (MOF), which possesses stable framework structure constructed by highly connected metal-oxo cluster nodes and organic linkers, has shown great promise in gas storage, adsorption, and separation, owing to the high surface areas, tunable pore aperture, and rich functional groups. In this review article, we summarized recent progress made in synthesizing high-valence MOF (e. g., UiO-66, MIL-125, PCN-22, and MIP-207) with metal-oxo cluster as metal source. Of particular note, recent breakthroughs in the preparation of UiO-66 and MIL-125 membranes with the corresponding Zr6 -oxo and Ti8 -oxo cluster sources (e. g., Zr6 O4 (OH)4 (OAc)12 and Ti8 O8 (OOCR)16 clusters) possessing superior separation performance were highlighted. In the end, an outlook on the preparation of versatile high-valence MOF membranes with the corresponding metal-oxo clusters as metal sources was highlighted.
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Affiliation(s)
- Chen Wang
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, School of Chemical Engineering, Dalian University of Technology, Linggong Road 2 Ganjingzi District, Dalian, 116024, P. R. China
| | - Jiahui Yan
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, School of Chemical Engineering, Dalian University of Technology, Linggong Road 2 Ganjingzi District, Dalian, 116024, P. R. China
| | - Sixing Chen
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, School of Chemical Engineering, Dalian University of Technology, Linggong Road 2 Ganjingzi District, Dalian, 116024, P. R. China
| | - Yi Liu
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, School of Chemical Engineering, Dalian University of Technology, Linggong Road 2 Ganjingzi District, Dalian, 116024, P. R. China.,Dalian Key Laboratory of Membrane Materials and Membrane Processes, Dalian University of Technology Linggong Road 2 Ganjingzi District, Dalian, 116024, P. R. China
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Abstract
Monodisperse and atomically precise Ag nanoclusters have attracted considerable recent research interest. A conventional silver cluster usually consists of a silver metallic kernel and an organic peripheral ligand shell. Nevertheless, the present inevitable problem is the unsatisfied stability of such nanoclusters. In this concept, we will give an introduction to Ag clusters protected by metal-oxo modules which exhibit enhanced stability and unique properties. Accordingly, three different types of clusters are summarized: (1) Ag clusters protected by mononuclear oxometallates; (2) Ag clusters protected by block-like metal-oxo clusters; (3) Ag clusters protected by hollow-like metal-oxo clusters. The aim of this concept is to offer possible general guidance and insight into future rational design of more metal-oxo clusters protected silver clusters or even other coinage metal nanoclusters.
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Affiliation(s)
- Xi Fan
- Chinese Academy of Sciences Fujian Institute of Research on the Structure of Matter, State Key Laboratory of Structural Chemistry, CHINA
| | - Shuai Chen
- Chinese Academy of Sciences Fujian Institute of Research on the Structure of Matter, State Key Laboratory of Structural Chemistry, CHINA
| | - Lei Zhang
- Fujian Institute of Research on the Structure of Matter, State Key Laboratory of Structural Chemistry, 155 Yangqiao Road West, 350002, Fuzhou, CHINA
| | - Jian Zhang
- Chinese Academy of Sciences Fujian Institute of Research on the Structure of Matter, State Key Laboratory of Structural Chemistry, CHINA
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Chen H, Snurr RQ. Insights into Catalytic Gas-Phase Hydrolysis of Organophosphate Chemical Warfare Agents by MOF-Supported Bimetallic Metal-Oxo Clusters. ACS Appl Mater Interfaces 2020; 12:14631-14640. [PMID: 31909586 DOI: 10.1021/acsami.9b19484] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Zirconium-based metal-organic frameworks (Zr-MOFs) have been reported to be efficient catalysts for the hydrolysis of organophosphate chemical warfare agents (CWAs) in buffered solutions. However, for the gas-phase reaction, which is more relevant to the situation in a battlefield gas mask application, the kinetics of Zr-MOF catalysts may be severely hindered by strong product inhibition. To improve the catalytic performance, we computationally screened a series of synthetically accessible Zr-MOF-supported bimetallic metal-oxo clusters in which the metal-oxygen-metal active motif is preserved, aiming to find catalysts that have lower binding affinities to the hydrolysis product. For the promising catalyst Al2O2(OH)2@NU-1000 identified from the screening using density functional theory, we mapped out the full reaction pathway of gas-phase dimethyl p-nitrophenolphosphate (DMNP) hydrolysis and analyzed the free energy profile as well as the turnover frequency (TOF). We found that the catalytic mechanism on the new catalyst is slightly different from the one on NU-1000, which also led to a different TOF-limiting step. Additional factors that can affect the overall catalytic performance in practical application, such as the amount of ambient moisture and the existence of acid gases that may poison the catalyst, have also been evaluated.
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Affiliation(s)
- Haoyuan Chen
- Department of Chemical & Biological Engineering, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Randall Q Snurr
- Department of Chemical & Biological Engineering, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
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Moons J, de Azambuja F, Mihailovic J, Kozma K, Smiljanic K, Amiri M, Cirkovic Velickovic T, Nyman M, Parac-Vogt TN. Discrete Hf 18 Metal-oxo Cluster as a Heterogeneous Nanozyme for Site-Specific Proteolysis. Angew Chem Int Ed Engl 2020; 59:9094-9101. [PMID: 32154631 DOI: 10.1002/anie.202001036] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Revised: 03/04/2020] [Indexed: 12/11/2022]
Abstract
The selective hydrolysis of proteins by non-enzymatic catalysis is difficult to achieve, yet it is crucial for applications in biotechnology and proteomics. Herein, we report that discrete hafnium metal-oxo cluster [Hf18 O10 (OH)26 (SO4 )13 ⋅(H2 O)33 ] (Hf18 ), which is centred by the same hexamer motif found in many MOFs, acts as a heterogeneous catalyst for the efficient hydrolysis of horse heart myoglobin (HHM) in low buffer concentrations. Among 154 amino acids present in the sequence of HHM, strictly selective cleavage at only 6 solvent accessible aspartate residues was observed. Mechanistic experiments suggest that the hydrolytic activity is likely derived from the actuation of HfIV Lewis acidic sites and the Brønsted acidic surface of Hf18 . X-ray scattering and ESI-MS revealed that Hf18 is completely insoluble in these conditions, confirming the HHM hydrolysis is caused by a heterogeneous reaction of the solid Hf18 cluster, and not from smaller, soluble Hf species that could leach into solution.
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Affiliation(s)
- Jens Moons
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | | | - Jelena Mihailovic
- Faculty of Chemistry, University of Belgrade, Studentski trg 16, 11000, Belgrade, Serbia
| | - Karoly Kozma
- Department of Chemistry, Oregon State University, Corvallis, OR, 97331-4003, USA
| | - Katarina Smiljanic
- Faculty of Chemistry, University of Belgrade, Studentski trg 16, 11000, Belgrade, Serbia
| | - Mehran Amiri
- Department of Chemistry, Oregon State University, Corvallis, OR, 97331-4003, USA
| | - Tanja Cirkovic Velickovic
- Faculty of Chemistry, University of Belgrade, Studentski trg 16, 11000, Belgrade, Serbia.,Ghent University Global Campus, Incheon, South Korea.,Ghent University, Faculty of Bioscience Engineering, Ghent, Belgium.,Serbian Academy of Sciences and Arts, Belgrade, Serbia
| | - May Nyman
- Department of Chemistry, Oregon State University, Corvallis, OR, 97331-4003, USA
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Gumerova NI, Al-Sayed E, Krivosudský L, Čipčić-Paljetak H, Verbanac D, Rompel A. Antibacterial Activity of Polyoxometalates Against Moraxella catarrhalis. Front Chem 2018; 6:336. [PMID: 30155460 PMCID: PMC6102686 DOI: 10.3389/fchem.2018.00336] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Accepted: 07/19/2018] [Indexed: 01/02/2023] Open
Abstract
The antibacterial activity of 29 different polyoxometalates (POMs) against Moraxella catarrhalis was investigated by determination of the minimum inhibitory concentration (MIC). The Preyssler type polyoxotungstate (POT) [NaP5W30O110]14− demonstrates the highest activity against M. catarrhalis (MIC = 1 μg/ml) among all tested POMs. Moreover, we show that the Dawson type based anions, [P2W18O62]6−, [(P2O7)Mo18O54]4−, [As2Mo18O62]6−, [H3P2W15V3O62]6−, and [AsW18O60]7− are selective on M. catarrhalis (MIC range of 2-8 μg/ml). Among the six tested Keggin type based POTs ([PW12O40]3−, [H2PCoW11O40]5−, [H2CoTiW11O40]6−, [SiW10O36]8−, [SbW9O33]9−, [AsW9O33]9−), only the mono-substituted [H2CoTiW11O40]6− showed MIC value comparable to those of the Dawson type group. Polyoxovanadates (POVs) and Anderson type POMs were inactive against M. catarrhalis within the tested concentration range (1-256 μg/ml). Four Dawson type POMs [P2W18O62]6−, [(P2O7)Mo18O54]4−, [As2Mo18O62]6−, [H3P2W15V3O62]6− and the Preyssler POT [NaP5W30O110]14− showed promising antibacterial activity against M. catarrhalis (MICs < 8 μg/ml) and were therefore tested against three additional bacteria, namely S. aureus, E. faecalis, and E. coli. The most potent antibacterial agent was [NaP5W30O110]14−, exhibiting the lowest MIC values of 16 μg/ml against S. aureus and 8 μg/ml against E. faecalis. The three most active compounds ([NaP5W30O110]14−, [P2W18O62]6−, and [H3P2W15V3O62]6−) show bacteriostatic effects in killing kinetics study against M. catarrhalis. We demonstrate, that POM activity is mainly depending on composition, shape, and size, but in the case of medium-size POTs (charge is more than −12 and number of addenda atoms is not being higher than 22) its activity correlates with the total net charge.
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Affiliation(s)
- Nadiia I Gumerova
- Universität Wien, Fakultät für Chemie, Institut für Biophysikalische Chemie, Wien, Austria
| | - Emir Al-Sayed
- Universität Wien, Fakultät für Chemie, Institut für Biophysikalische Chemie, Wien, Austria
| | - Lukáš Krivosudský
- Universität Wien, Fakultät für Chemie, Institut für Biophysikalische Chemie, Wien, Austria
| | - Hana Čipčić-Paljetak
- Center for Translational and Clinical Research, Croatian Center of Excellence for Reproductive and Regenerative Medicine, School of Medicine, University of Zagreb, Zagreb, Croatia
| | - Donatella Verbanac
- Center for Translational and Clinical Research, Croatian Center of Excellence for Reproductive and Regenerative Medicine, School of Medicine, University of Zagreb, Zagreb, Croatia
| | - Annette Rompel
- Universität Wien, Fakultät für Chemie, Institut für Biophysikalische Chemie, Wien, Austria
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