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Lampe A, Riedl D, Kampling H, Nolte T, Kirchhoff C, Grote V, Fischer MJ, Kruse J. Improvements of complex post-traumatic stress disorder symptoms during a multimodal psychodynamic inpatient rehabilitation treatment - results of an observational single-centre pilot study. Eur J Psychotraumatol 2024; 15:2333221. [PMID: 38577992 PMCID: PMC11000601 DOI: 10.1080/20008066.2024.2333221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 03/11/2024] [Indexed: 04/06/2024] Open
Abstract
Background: Complex post-traumatic stress disorder (CPTSD) describes chronic disturbances in self-organization (i.e. affect dysregulation; negative self-concept; severe difficulties in relationships) which are frequently observed in survivors of prolonged, repeated or multiple traumatic stressors. So far, evidence of psychodynamic treatment approaches for CPTSD is scarce.Methods: In this single-centre observational pilot study, symptom change during a 6-week psychodynamic inpatient treatment in a multimodal psychosomatic rehabilitation centre was evaluated using repeated measures analyses of variance (ANOVAs). Patients completed questionnaires on PTSD and CPTSD symptoms (ITQ), anxiety, depression and somatization (BSI-18), functional impairment (WHODAS) and epistemic trust, mistrust and credulity (ETMCQ) before (T1) and at the end of treatment (T2). A hierarchical linear regression analysis was calculated to identify factors associated with improved CPTSD symptoms.Results: A total of n = 50 patients with CPTSD were included in the study, of whom n = 40 (80%) completed treatment. Patients reported a significant reduction of CPTSD symptoms during treatment with a large effect size (-3.9 points; p < .001; η2 = .36), as well as a significant reduction of psychological distress (p < .001; η2 = .55) and functional impairment (p < .001; η2 = .59). At the end of treatment, 41.0% of patients no longer fulfilled the diagnostic criteria for CPTSD. Changes in epistemic stance included improved epistemic trust (β = -.34, p = .026) and decreased epistemic credulity (β = .37, p = .017), which together with lower age (β = .43, p = .012) and lower depression levels at baseline (β = .35, p = .054) were significantly associated with baseline adjusted mean change of CPTSD symptoms during therapy and explained 48% of its variance.Discussion: In our study, patients reported a significant reduction of CPTSD symptoms and comorbid symptoms during a multimodal psychodynamic inpatient rehabilitation treatment. Improved epistemic trust may facilitate the establishment of a trusting therapeutic relationship, thus fostering an environment of openness for knowledge transfer (i.e. social learning) and the exploration of diverse viewpoints and perspectives in the therapeutic process.
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Affiliation(s)
- A. Lampe
- Ludwig Boltzmann Institute for Rehabilitation Research, Vienna, Austria
- VAMED Rehabilitation Montafon, Schruns, Austria
| | - D. Riedl
- Ludwig Boltzmann Institute for Rehabilitation Research, Vienna, Austria
- University Hospital of Psychiatry II, Department of Psychiatry, Psychotherapy Psychosomatics and Medical Psychology, Medical University of Innsbruck, Innsbruck, Austria
| | - H. Kampling
- Department of Psychosomatic Medicine and Psychotherapy, Justus Liebig University Giessen, Giessen, Germany
| | - T. Nolte
- Anna Freud National Centre for Children and Families, London, UK
- Research Department for Clinical, Educational and Heath Psychology, UCL, London, UK
| | - C. Kirchhoff
- University Hospital of Psychiatry II, Department of Psychiatry, Psychotherapy Psychosomatics and Medical Psychology, Medical University of Innsbruck, Innsbruck, Austria
| | - V. Grote
- Ludwig Boltzmann Institute for Rehabilitation Research, Vienna, Austria
| | - M. J. Fischer
- Ludwig Boltzmann Institute for Rehabilitation Research, Vienna, Austria
- VAMED Rehabilitation Center Kitzbuehel, Kitzbuehel, Austria
| | - J. Kruse
- Department of Psychosomatic Medicine and Psychotherapy, Justus Liebig University Giessen, Giessen, Germany
- Department for Psychosomatic Medicine and Psychotherapy, Medical Center of the Philipps University Marburg, Marburg, Germany
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Kuraoka T, Goto S, Kanno M, Díaz-Tendero S, Reino-González J, Trinter F, Pier A, Sommerlad L, Melzer N, McGinnis OD, Kruse J, Wenzel T, Jahnke T, Xue H, Kishimoto N, Yoshikawa K, Tamura Y, Ota F, Hatada K, Ueda K, Martín F. Tracing Photoinduced Hydrogen Migration in Alcohol Dications from Time-Resolved Molecular-Frame Photoelectron Angular Distributions. J Phys Chem A 2024; 128:1241-1249. [PMID: 38324399 PMCID: PMC10895665 DOI: 10.1021/acs.jpca.3c07640] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2023] [Revised: 01/12/2024] [Accepted: 01/16/2024] [Indexed: 02/09/2024]
Abstract
The recent implementation of attosecond and few-femtosecond X-ray pump/X-ray probe schemes in large-scale free-electron laser facilities has opened the way to visualize fast nuclear dynamics in molecules with unprecedented temporal and spatial resolution. Here, we present the results of theoretical calculations showing how polarization-averaged molecular-frame photoelectron angular distributions (PA-MFPADs) can be used to visualize the dynamics of hydrogen migration in methanol, ethanol, propanol, and isopropyl alcohol dications generated by X-ray irradiation of the corresponding neutral species. We show that changes in the PA-MFPADs with the pump-probe delay as a result of intramolecular photoelectron diffraction carry information on the dynamics of hydrogen migration in real space. Although visualization of this dynamics is more straightforward in the smaller systems, methanol and ethanol, one can still recognize the signature of that motion in propanol and isopropyl alcohol and assign a tentative path to it. A possible pathway for a corresponding experiment requires an angularly resolved detection of photoelectrons in coincidence with molecular fragment ions used to define a molecular frame of reference. Such studies have become, in principle, possible since the first XFELs with sufficiently high repetition rates have emerged. To further support our findings, we provide experimental evidence of H migration in ethanol-OD from ion-ion coincidence measurements performed with synchrotron radiation.
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Affiliation(s)
- T. Kuraoka
- Department
of Physics, University of Toyama, Gofuku 3190, Toyama 930-8555, Japan
| | - S. Goto
- Department
of Physics, University of Toyama, Gofuku 3190, Toyama 930-8555, Japan
| | - M. Kanno
- Department
of Chemistry, Tohoku University, 6-3 Aramaki Aza-Aoba, Aoba-ku, Sendai 980-8578, Japan
| | - S. Díaz-Tendero
- Departamento
de Química, Universidad Autónoma
de Madrid, Madrid 28049, Spain
- Condensed
Matter Physics Center (IFIMAC), Universidad
Autónoma de Madrid, Madrid 28049, Spain
- Institute
for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - J. Reino-González
- Instituto
Madrileño de Estudios Avanzados en Nanociencia (IMDEA-Nano), Campus de Cantoblanco, Madrid 28049, Spain
| | - F. Trinter
- Molecular
Physics, Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, Berlin 14195, Germany
| | - A. Pier
- Institut
für Kernphysik, Goethe-Universität
Frankfurt, Max-von-Laue-Straβe 1, Frankfurt am
Main 60438, Germany
| | - L. Sommerlad
- Institut
für Kernphysik, Goethe-Universität
Frankfurt, Max-von-Laue-Straβe 1, Frankfurt am
Main 60438, Germany
| | - N. Melzer
- Institut
für Kernphysik, Goethe-Universität
Frankfurt, Max-von-Laue-Straβe 1, Frankfurt am
Main 60438, Germany
| | - O. D. McGinnis
- Institut
für Kernphysik, Goethe-Universität
Frankfurt, Max-von-Laue-Straβe 1, Frankfurt am
Main 60438, Germany
| | - J. Kruse
- Institut
für Kernphysik, Goethe-Universität
Frankfurt, Max-von-Laue-Straβe 1, Frankfurt am
Main 60438, Germany
| | - T. Wenzel
- Institut
für Kernphysik, Goethe-Universität
Frankfurt, Max-von-Laue-Straβe 1, Frankfurt am
Main 60438, Germany
| | - T. Jahnke
- Max-Planck-Institut
für Kernphysik, Saupfercheckweg 1, Heidelberg 69117, Germany
- European
XFEL, Holzkoppel
4, Schenefeld 22869, Germany
| | - H. Xue
- Department
of Chemistry, Tohoku University, 6-3 Aramaki Aza-Aoba, Aoba-ku, Sendai 980-8578, Japan
| | - N. Kishimoto
- Department
of Chemistry, Tohoku University, 6-3 Aramaki Aza-Aoba, Aoba-ku, Sendai 980-8578, Japan
| | - K. Yoshikawa
- Department
of Physics, University of Toyama, Gofuku 3190, Toyama 930-8555, Japan
| | - Y. Tamura
- Department
of Physics, University of Toyama, Gofuku 3190, Toyama 930-8555, Japan
| | - F. Ota
- Department
of Physics, University of Toyama, Gofuku 3190, Toyama 930-8555, Japan
| | - K. Hatada
- Department
of Physics, University of Toyama, Gofuku 3190, Toyama 930-8555, Japan
| | - K. Ueda
- Department
of Chemistry, Tohoku University, 6-3 Aramaki Aza-Aoba, Aoba-ku, Sendai 980-8578, Japan
| | - F. Martín
- Departamento
de Química, Universidad Autónoma
de Madrid, Madrid 28049, Spain
- Instituto
Madrileño de Estudios Avanzados en Nanociencia (IMDEA-Nano), Campus de Cantoblanco, Madrid 28049, Spain
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Hetzel M, Pezzè L, Pür C, Quensen M, Hüper A, Geng J, Kruse J, Santos L, Ertmer W, Smerzi A, Klempt C. Tomography of a Number-Resolving Detector by Reconstruction of an Atomic Many-Body Quantum State. Phys Rev Lett 2023; 131:260601. [PMID: 38215377 DOI: 10.1103/physrevlett.131.260601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Accepted: 10/10/2023] [Indexed: 01/14/2024]
Abstract
The high-fidelity analysis of many-body quantum states of indistinguishable atoms requires the accurate counting of atoms. Here we report the tomographic reconstruction of an atom-number-resolving detector. The tomography is performed with an ultracold rubidium ensemble that is prepared in a coherent spin state by driving a Rabi coupling between the two hyperfine clock levels. The coupling is followed by counting the occupation number in one level. We characterize the fidelity of our detector and show that a negative-valued Wigner function is associated with it. Our results offer an exciting perspective for the high-fidelity reconstruction of entangled states and can be applied for a future demonstration of Heisenberg-limited atom interferometry.
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Affiliation(s)
- Mareike Hetzel
- Institut für Quantenoptik, Leibniz Universität Hannover, Welfengarten 1, D-30167 Hannover, Germany
| | - Luca Pezzè
- QSTAR and INO-CNR and LENS, Largo Enrico Fermi 2, 50125 Firenze, Italy
| | - Cebrail Pür
- Institut für Quantenoptik, Leibniz Universität Hannover, Welfengarten 1, D-30167 Hannover, Germany
| | - Martin Quensen
- Institut für Quantenoptik, Leibniz Universität Hannover, Welfengarten 1, D-30167 Hannover, Germany
| | - Andreas Hüper
- Institut für Quantenoptik, Leibniz Universität Hannover, Welfengarten 1, D-30167 Hannover, Germany
| | - Jiao Geng
- Key Laboratory of 3D Micro/Nano Fabrication and Characterization of Zhejiang Province, School of Engineering, Westlake University, 18 Shilongshan Road, Hangzhou 310024, Zhejiang Province, China
- Institute of Advanced Technology, Westlake Institute for Advanced Study, 18 Shilongshan Road, Hangzhou 310024, Zhejiang Province, China
| | - Jens Kruse
- Institut für Quantenoptik, Leibniz Universität Hannover, Welfengarten 1, D-30167 Hannover, Germany
| | - Luis Santos
- Institut für Theoretische Physik, Leibniz Universität Hannover, Appelstraße 2, D-30167 Hannover, Germany
| | - Wolfgang Ertmer
- Institut für Quantenoptik, Leibniz Universität Hannover, Welfengarten 1, D-30167 Hannover, Germany
| | - Augusto Smerzi
- QSTAR and INO-CNR and LENS, Largo Enrico Fermi 2, 50125 Firenze, Italy
| | - Carsten Klempt
- Institut für Quantenoptik, Leibniz Universität Hannover, Welfengarten 1, D-30167 Hannover, Germany
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Siebers N, Kruse J, Jia Y, Lennartz B, Koch S. Loss of subsurface particulate and truly dissolved phosphorus during various flow conditions along a tile drain-ditch-brook continuum. Sci Total Environ 2023; 866:161439. [PMID: 36623669 DOI: 10.1016/j.scitotenv.2023.161439] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 01/03/2023] [Accepted: 01/03/2023] [Indexed: 06/17/2023]
Abstract
Subsurface losses of colloidal and truly dissolved phosphorus (P) from arable land can cause ecological damage to surface water. To gain deeper knowledge about subsurface particulate P transport from inland sources to brooks, we studied an artificially drained lowland catchment (1550 ha) in north-eastern Germany. We took daily samples during the winter discharge period 2019/2020 at different locations, i.e., a drain outlet, ditch, and brook, and analyzed them for total P (TPunfiltered), particulate P >750 nm (TP>750 nm), colloidal P (TPcolloids), and truly dissolved P (truly DP) during baseflow conditions and high flow events. The majority of TPunfiltered in the tile drain, ditch, and brook was formed by TP>750 nm (54 to 59 %), followed by truly DP (34 to 38 %) and a small contribution of TPcolloids (5 to 6 %). During flow events, 63 to 66 % of TPunfiltered was present as particulate P (TP>750 nm + TPcolloids), whereas during baseflow the figure was 97 to 99 %; thus, truly DP was almost negligible (1 to 3 % of TPunfiltered) during baseflow. We also found that colloids transported in the water samples have their origin in the water-extractable nanocolloids (0.66 to 20 nm) within the C horizon, which are mainly composed of clay minerals. Along the flow path there is an agglomeration of P-bearing nanocolloids from the soil, with an increasing importance of iron(III) (hydr)oxides over clay particles. Event flow facilitated the transport of greater amounts of larger particles (>750 nm) through the soil matrix. However, the discharge did not exhaust colloid mobilization and colloidal P was exported through the tile-drainage system during the complete runoff period, even under baseflow conditions. Therefore, it is essential that the impact of rainfall intensity and pattern on particulate P discharge be considered more closely so that drainage management can be adjusted to achieve a reduced P export from agricultural land.
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Affiliation(s)
- Nina Siebers
- Institute of Bio and Geosciences-Agrosphere (IBG-3), Forschungszentrum Jülich, D-52425 Jülich, Germany.
| | - Jens Kruse
- Institute of Bio and Geosciences-Agrosphere (IBG-3), Forschungszentrum Jülich, D-52425 Jülich, Germany; Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University of Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Yunsheng Jia
- Institute of Bio and Geosciences-Agrosphere (IBG-3), Forschungszentrum Jülich, D-52425 Jülich, Germany
| | - Bernd Lennartz
- Faculty of Agricultural and Environmental Sciences, University of Rostock, Justus-von-Liebig-Weg 6, D-18051 Rostock, Germany
| | - Stefan Koch
- Faculty of Agricultural and Environmental Sciences, University of Rostock, Justus-von-Liebig-Weg 6, D-18051 Rostock, Germany
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5
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Luedemann WM, Zickler D, Kruse J, Koerner R, Lenk J, Erxleben C, Torsello GF, Fehrenbach U, Jonczyk M, Guenther RW, De Bucourt M, Gebauer B. Percutaneous Large-Bore Pulmonary Thrombectomy with the FlowTriever Device: Initial Experience in Intermediate-High and High-Risk Patients. Cardiovasc Intervent Radiol 2023; 46:35-42. [PMID: 36175655 PMCID: PMC9521880 DOI: 10.1007/s00270-022-03266-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 08/23/2022] [Indexed: 01/06/2023]
Abstract
OBJECTIVES This retrospective cohort study investigates outcomes of patients with intermediate-high and high-risk pulmonary embolism (PE) who were treated with transfemoral mechanical thrombectomy (MT) using the large-bore Inari FlowTriever aspiration catheter system. MATERIAL AND METHODS Twenty-seven patients (mean age 56.1 ± 15.3 years) treated with MT for PE between 04/2021 and 11/2021 were reviewed. Risk stratification was performed according to European Society of Cardiology (ESC) guidelines. Clinical and hemodynamic characteristics before and after the procedure were compared with the paired Student's t test, and duration of hospital stay was analyzed with the Kaplan-Meier estimator. Procedure-related adverse advents were assessed. RESULTS Of 27 patients treated, 18 were classified as high risk. Mean right-to-left ventricular ratio on baseline CT was 1.7 ± 0.6. After MT, a statistically significant reduction in mean pulmonary artery pressures from 35.9 ± 9.6 to 26.1 ± 9.0 mmHg (p = 0.002) and heart rates from 109.4 ± 22.5 to 82.8 ± 13.8 beats per minute (p < 0.001) was achieved. Two patients died of prolonged cardiogenic shock. Three patients died of post-interventional complications of which a paradoxical embolism can be considered related to MT. One patient needed short cardiopulmonary resuscitation during the procedure due to clot displacement. Patients with PE as primary driver of clinical instability had a median intensive care unit (ICU) stay of 2 days (0.5-3.5 days). Patients who developed PE as a complication of an underlying medical condition spent 11 days (9.5-12.5 days) in the ICU. CONCLUSION In this small study population of predominantly high-risk PE patients, large-bore MT without adjunctive thrombolysis was feasible with an acceptable procedure-related complication rate.
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Affiliation(s)
- W. M. Luedemann
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - D. Zickler
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany ,grid.6363.00000 0001 2218 4662Department of Nephrology and Medical Intensive Care, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - J. Kruse
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany ,grid.6363.00000 0001 2218 4662Department of Nephrology and Medical Intensive Care, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - R. Koerner
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany ,grid.6363.00000 0001 2218 4662Department of Nephrology and Medical Intensive Care, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - J. Lenk
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - C. Erxleben
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - G. F. Torsello
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - U. Fehrenbach
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - M. Jonczyk
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - R. W. Guenther
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - M. De Bucourt
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
| | - B. Gebauer
- grid.6363.00000 0001 2218 4662Department of Diagnostic and Interventional Radiology, Charité Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität Zu Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
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6
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Crous P, Begoude B, Boers J, Braun U, Declercq B, Dijksterhuis J, Elliott T, Garay-Rodriguez G, Jurjević Ž, Kruse J, Linde C, Loyd A, Mound L, Osieck E, Rivera-Vargas L, Quimbita A, Rodas C, Roux J, Schumacher R, Starink-Willemse M, Thangavel R, Trappe J, van Iperen A, Van Steenwinkel C, Wells A, Wingfield M, Yilmaz N, Groenewald J. New and Interesting Fungi. 5. Fungal Syst Evol 2022; 10:19-90. [PMID: 36789279 PMCID: PMC9903348 DOI: 10.3114/fuse.2022.10.02] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Accepted: 08/02/2022] [Indexed: 11/07/2022] Open
Abstract
Nine new genera, 17 new species, nine new combinations, seven epitypes, three lectotypes, one neotype, and 14 interesting new host and / or geographical records are introduced in this study. New genera: Neobarrmaelia (based on Neobarrmaelia hyphaenes), Neobryochiton (based on Neobryochiton narthecii), Neocamarographium (based on Neocamarographium carpini), Nothocladosporium (based on Nothocladosporium syzygii), Nothopseudocercospora (based on Nothopseudocercospora dictamni), Paracamarographium (based on Paracamarographium koreanum), Pseudohormonema (based on Pseudohormonema sordidus), Quasiphoma (based on Quasiphoma hyphaenes), Rapidomyces (based on Rapidomyces narthecii). New species: Ascocorticium sorbicola (on leaves of Sorbus aucuparia, Belgium), Dactylaria retrophylli (on leaves of Retrophyllum rospigliosii, Colombia), Dactylellina miltoniae (on twigs of Miltonia clowesii, Colombia), Exophiala eucalyptigena (on dead leaves of Eucalyptus viminalis subsp. viminalis supporting Idolothrips spectrum, Australia), Idriellomyces syzygii (on leaves of Syzygium chordatum, South Africa), Microcera lichenicola (on Parmelia sulcata, Netherlands), Neobarrmaelia hyphaenes (on leaves of Hyphaene sp., South Africa), Neobryochiton narthecii (on dead leaves of Narthecium ossifragum, Netherlands), Niesslia pseudoexilis (on dead leaf of Quercus petraea, Serbia), Nothocladosporium syzygii (on leaves of Syzygium chordatum, South Africa), Nothotrimmatostroma corymbiae (on leaves of Corymbia henryi, South Africa), Phaeosphaeria hyphaenes (on leaves of Hyphaene sp., South Africa), Pseudohormonema sordidus (on a from human pacemaker, USA), Quasiphoma hyphaenes (on leaves of Hyphaene sp., South Africa), Rapidomyces narthecii (on dead leaves of Narthecium ossifragum, Netherlands), Reticulascus parahennebertii (on dead culm of Juncus inflexus, Netherlands), Scytalidium philadelphianum (from compressed air in a factory, USA). New combinations: Neobarrmaelia serenoae, Nothopseudocercospora dictamni, Dothiora viticola, Floricola sulcata, Neocamarographium carpini, Paracamarographium koreanum, Rhexocercosporidium bellocense, Russula lilacina. Epitypes: Elsinoe corni (on leaves of Cornus florida, USA), Leptopeltis litigiosa (on dead leaf fronds of Pteridium aquilinum, Netherlands), Nothopseudocercospora dictamni (on living leaves of Dictamnus albus, Russia), Ramularia arvensis (on leaves of Potentilla reptans, Netherlands), Rhexocercosporidium bellocense (on leaves of Verbascum sp., Germany), Rhopographus filicinus (on dead leaf fronds of Pteridium aquilinum, Netherlands), Septoria robiniae (on leaves of Robinia pseudoacacia, Belgium). Lectotypes: Leptopeltis litigiosa (on Pteridium aquilinum, France), Rhopographus filicinus (on dead leaf fronds of Pteridium aquilinum, Netherlands), Septoria robiniae (on leaves of Robinia pseudoacacia, Belgium). Neotype: Camarographium stephensii (on dead leaf fronds of Pteridium aquilinum, Netherlands). Citation: Crous PW, Begoude BAD, Boers J, Braun U, Declercq B, Dijksterhuis J, Elliott TF, Garay-Rodriguez GA, Jurjević Ž, Kruse J, Linde CC, Loyd A, Mound L, Osieck ER, Rivera-Vargas LI, Quimbita AM, Rodas CA, Roux J, Schumacher RK, Starink-Willemse M, Thangavel R, Trappe JM, van Iperen AL, Van Steenwinkel C, Wells A, Wingfield MJ, Yilmaz N, Groenewald JZ (2022) New and Interesting Fungi. 5. Fungal Systematics and Evolution 10: 19-90. doi: 10.3114/fuse.2022.10.02.
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Affiliation(s)
- P.W. Crous
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands,Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - B.A.D. Begoude
- Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa,Institute for Agricultural Research for Development (IRAD), Yaounde, Cameroon
| | - J. Boers
- Poststraat 50-104, 6701 AZ, Wageningen, Netherlands
| | - U. Braun
- Martin-Luther-Universität, Institut für Biologie, Bereich Geobotanik und Botanischer Garten, Herbarium, Neuwerk 21, 06099 Halle (Saale), Germany
| | | | - J. Dijksterhuis
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - T.F. Elliott
- Ecosystem Management, University of New England, Armidale, NSW 2351, Australia
| | - G.A. Garay-Rodriguez
- Department Agro-Environmental Sciences, College of Agricultural Sciences, University of Puerto Rico-Mayaguez Campus, Mayaguez, P.R. 00680, Puerto Rico
| | - Ž. Jurjević
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - J. Kruse
- Pfalzmuseum für Naturkunde – POLLICHIA-Museum, Hermann-Schäfer-Str. 17, 67098 Bad Dürkheim, Germany
| | - C.C. Linde
- Ecology and Evolution, Research School of Biology, College of Science, The Australian National University, Canberra, ACT, 2600, Australia
| | - A. Loyd
- Bartlett Tree Experts, 13768 Hamilton Rd, Charlotte, NC 28278, USA
| | - L. Mound
- Australian National Insect Collection, CSIRO, P.O. Box 1700, Canberra, ACT 2601, Australia
| | - E.R. Osieck
- Jkvr. C.M. van Asch van Wijcklaan 19, 3972 ST Driebergen-Rijsenburg, Netherlands Forestry Health Protection Programme Smurfit Kappa - Colombia Calle 15#18-109 Yumbo, Colombia
| | - L.I. Rivera-Vargas
- Department Agro-Environmental Sciences, College of Agricultural Sciences, University of Puerto Rico-Mayaguez Campus, Mayaguez, P.R. 00680, Puerto Rico
| | - A.M. Quimbita
- Department Agro-Environmental Sciences, College of Agricultural Sciences, University of Puerto Rico-Mayaguez Campus, Mayaguez, P.R. 00680, Puerto Rico
| | - C.A. Rodas
- Forestry Health Protection Programme Smurfit Kappa - Colombia Calle 15#18-109 Yumbo, Colombia
| | - J. Roux
- Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
| | | | - M. Starink-Willemse
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - R. Thangavel
- Plant Health and Environment Laboratory, Ministry for Primary Industries, P.O. Box 2095, Auckland 1140, New Zealand
| | - J.M. Trappe
- Department of Forest Ecosystems and Society, Oregon State University, Corvallis, Oregon 97331-5752, USA,U.S. Forest Service, Pacific Northwest Research Station, Forestry Sciences Laboratory, 3200 Jefferson Way, Corvallis, Oregon 97331-8550, USA
| | - A.L. van Iperen
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | | | - A. Wells
- Australian National Insect Collection, CSIRO, P.O. Box 1700, Canberra, ACT 2601, Australia
| | - M.J. Wingfield
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - N. Yilmaz
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - J.Z. Groenewald
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
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7
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Depotter JRL, Ökmen B, Ebert MK, Beckers J, Kruse J, Thines M, Doehlemann G. High Nucleotide Substitution Rates Associated with Retrotransposon Proliferation Drive Dynamic Secretome Evolution in Smut Pathogens. Microbiol Spectr 2022; 10:e0034922. [PMID: 35972267 PMCID: PMC9603552 DOI: 10.1128/spectrum.00349-22] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Accepted: 07/22/2022] [Indexed: 11/20/2022] Open
Abstract
Transposable elements (TEs) play a pivotal role in shaping diversity in eukaryotic genomes. The covered smut pathogen on barley, Ustilago hordei, encountered a recent genome expansion. Using long reads, we assembled genomes of 6 U. hordei strains and 3 sister species, to study this genome expansion. We found that larger genome sizes can mainly be attributed to a higher genome fraction of long terminal repeat retrotransposons (LTR-RTs). In the studied smut genomes, LTR-RTs fractions are the largest in U. hordei and are positively correlated with the mating-type locus sizes, which is up to ~560 kb in U. hordei. Furthermore, LTR-RTs were found to be associated with higher nucleotide substitution levels, as these occur in specific genome regions of smut species with a recent LTR-RT proliferation. Moreover, genes in genome regions with higher nucleotide substitution levels generally reside closer to LTR-RTs than other genome regions. Genome regions with many nucleotide substitutions encountered an especially high fraction of CG substitutions, which is not observed for LTR-RT sequences. The high nucleotide substitution levels particularly accelerate the evolution of secretome genes, as their more accessory nature results in substitutions that often lead to amino acid alterations. IMPORTANCE Genomic alteration can be generated through various means, in which transposable elements (TEs) can play a pivotal role. Their mobility causes mutagenesis in itself and can disrupt the function of the sequences they insert into. They also impact genome evolution as their repetitive nature facilitates nonhomologous recombination. Furthermore, TEs have been linked to specific epigenetic genome organizations. We report a recent TE proliferation in the genome of the barley covered smut fungus, Ustilago hordei. This proliferation is associated with a distinct nucleotide substitution regime that has a higher rate and a higher fraction of CG substitutions. This different regime shapes the evolution of genes in subjected genome regions. We hypothesize that TEs may influence the error-rate of DNA polymerase in a hitherto unknown fashion.
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Affiliation(s)
- J. R. L. Depotter
- CEPLAS, Institute for Plant Sciences, University of Cologne, Cologne, Germany
| | - B. Ökmen
- CEPLAS, Institute for Plant Sciences, University of Cologne, Cologne, Germany
| | - M. K. Ebert
- CEPLAS, Institute for Plant Sciences, University of Cologne, Cologne, Germany
| | - J. Beckers
- CEPLAS, Institute for Plant Sciences, University of Cologne, Cologne, Germany
| | - J. Kruse
- Senckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt a. M., Germany
- Institute of Ecology, Evolution and Diversity, Goethe University Frankfurt, Frankfurt a. M., Germany
| | - M. Thines
- Senckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt a. M., Germany
- Institute of Ecology, Evolution and Diversity, Goethe University Frankfurt, Frankfurt a. M., Germany
| | - G. Doehlemann
- CEPLAS, Institute for Plant Sciences, University of Cologne, Cologne, Germany
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8
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Ryley MJ, Tan YP, Kruse J, Thines M, Shivas RG. More than meets the eye — unexpected diversity in downy mildews (Oomycetes) on grasses in Australia. Mycol Prog 2022. [DOI: 10.1007/s11557-021-01750-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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9
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Crous PW, Osieck ER, Jurjević Ž, Boers J, van Iperen AL, Starink-Willemse M, Dima B, Balashov S, Bulgakov TS, Johnston PR, Morozova OV, Pinruan U, Sommai S, Alvarado P, Decock CA, Lebel T, McMullan-Fisher S, Moreno G, Shivas RG, Zhao L, Abdollahzadeh J, Abrinbana M, Ageev DV, Akhmetova G, Alexandrova AV, Altés A, Amaral AGG, Angelini C, Antonín V, Arenas F, Asselman P, Badali F, Baghela A, Bañares A, Barreto RW, Baseia IG, Bellanger JM, Berraf-Tebbal A, Biketova AY, Bukharova NV, Burgess TI, Cabero J, Câmara MPS, Cano-Lira JF, Ceryngier P, Chávez R, Cowan DA, de Lima AF, Oliveira RL, Denman S, Dang QN, Dovana F, Duarte IG, Eichmeier A, Erhard A, Esteve-Raventós F, Fellin A, Ferisin G, Ferreira RJ, Ferrer A, Finy P, Gaya E, Geering ADW, Gil-Durán C, Glässnerová K, Glushakova AM, Gramaje D, Guard FE, Guarnizo AL, Haelewaters D, Halling RE, Hill R, Hirooka Y, Hubka V, Iliushin VA, Ivanova DD, Ivanushkina NE, Jangsantear P, Justo A, Kachalkin AV, Kato S, Khamsuntorn P, Kirtsideli IY, Knapp DG, Kochkina GA, Koukol O, Kovács GM, Kruse J, Kumar TKA, Kušan I, Læssøe T, Larsson E, Lebeuf R, Levicán G, Loizides M, Marinho P, Luangsa-Ard JJ, Lukina EG, Magaña-Dueñas V, Maggs-Kölling G, Malysheva EF, Malysheva VF, Martín B, Martín MP, Matočec N, McTaggart AR, Mehrabi-Koushki M, Mešić A, Miller AN, Mironova P, Moreau PA, Morte A, Müller K, Nagy LG, Nanu S, Navarro-Ródenas A, Nel WJ, Nguyen TH, Nóbrega TF, Noordeloos ME, Olariaga I, Overton BE, Ozerskaya SM, Palani P, Pancorbo F, Papp V, Pawłowska J, Pham TQ, Phosri C, Popov ES, Portugal A, Pošta A, Reschke K, Reul M, Ricci GM, Rodríguez A, Romanowski J, Ruchikachorn N, Saar I, Safi A, Sakolrak B, Salzmann F, Sandoval-Denis M, Sangwichein E, Sanhueza L, Sato T, Sastoque A, Senn-Irlet B, Shibata A, Siepe K, Somrithipol S, Spetik M, Sridhar P, Stchigel AM, Stuskova K, Suwannasai N, Tan YP, Thangavel R, Tiago I, Tiwari S, Tkalčec Z, Tomashevskaya MA, Tonegawa C, Tran HX, Tran NT, Trovão J, Trubitsyn VE, Van Wyk J, Vieira WAS, Vila J, Visagie CM, Vizzini A, Volobuev SV, Vu DT, Wangsawat N, Yaguchi T, Ercole E, Ferreira BW, de Souza AP, Vieira BS, Groenewald JZ. Fungal Planet description sheets: 1284-1382. Persoonia 2021; 47:178-374. [PMID: 37693795 PMCID: PMC10486635 DOI: 10.3767/persoonia.2021.47.06] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Accepted: 11/04/2021] [Indexed: 11/25/2022]
Abstract
Novel species of fungi described in this study include those from various countries as follows: Antartica, Cladosporium austrolitorale from coastal sea sand. Australia, Austroboletus yourkae on soil, Crepidotus innuopurpureus on dead wood, Curvularia stenotaphri from roots and leaves of Stenotaphrum secundatum and Thecaphora stajsicii from capsules of Oxalis radicosa. Belgium, Paraxerochrysium coryli (incl. Paraxerochrysium gen. nov.) from Corylus avellana. Brazil, Calvatia nordestina on soil, Didymella tabebuiicola from leaf spots on Tabebuia aurea, Fusarium subflagellisporum from hypertrophied floral and vegetative branches of Mangifera indica and Microdochium maculosum from living leaves of Digitaria insularis. Canada, Cuphophyllus bondii from a grassland. Croatia, Mollisia inferiseptata from a rotten Laurus nobilis trunk. Cyprus, Amanita exilis on calcareous soil. Czech Republic, Cytospora hippophaicola from wood of symptomatic Vaccinium corymbosum. Denmark, Lasiosphaeria deviata on pieces of wood and herbaceous debris. Dominican Republic, Calocybella goethei among grass on a lawn. France (Corsica), Inocybe corsica on wet ground. France (French Guiana), Trechispora patawaensis on decayed branch of unknown angiosperm tree and Trechispora subregularis on decayed log of unknown angiosperm tree. Germany, Paramicrothecium sambuci (incl. Paramicrothecium gen. nov.) on dead stems of Sambucus nigra. India, Aureobasidium microtermitis from the gut of a Microtermes sp. termite, Laccaria diospyricola on soil and Phylloporia tamilnadensis on branches of Catunaregam spinosa. Iran, Pythium serotinoosporum from soil under Prunus dulcis. Italy, Pluteus brunneovenosus on twigs of broadleaved trees on the ground. Japan, Heterophoma rehmanniae on leaves of Rehmannia glutinosa f. hueichingensis. Kazakhstan, Murispora kazachstanica from healthy roots of Triticum aestivum. Namibia, Caespitomonium euphorbiae (incl. Caespitomonium gen. nov.) from stems of an Euphorbia sp. Netherlands, Alfaria junci, Myrmecridium junci, Myrmecridium juncicola, Myrmecridium juncigenum, Ophioceras junci, Paradinemasporium junci (incl. Paradinemasporium gen. nov.), Phialoseptomonium junci, Sporidesmiella juncicola, Xenopyricularia junci and Zaanenomyces quadripartis (incl. Zaanenomyces gen. nov.), from dead culms of Juncus effusus, Cylindromonium everniae and Rhodoveronaea everniae from Evernia prunastri, Cyphellophora sambuci and Myrmecridium sambuci from Sambucus nigra, Kiflimonium junci, Sarocladium junci, Zaanenomyces moderatricis-academiae and Zaanenomyces versatilis from dead culms of Juncus inflexus, Microcera physciae from Physcia tenella, Myrmecridium dactylidis from dead culms of Dactylis glomerata, Neochalara spiraeae and Sporidesmium spiraeae from leaves of Spiraea japonica, Neofabraea salicina from Salix sp., Paradissoconium narthecii (incl. Paradissoconium gen. nov.) from dead leaves of Narthecium ossifragum, Polyscytalum vaccinii from Vaccinium myrtillus, Pseudosoloacrosporiella cryptomeriae (incl. Pseudosoloacrosporiella gen. nov.) from leaves of Cryptomeria japonica, Ramularia pararhabdospora from Plantago lanceolata, Sporidesmiella pini from needles of Pinus sylvestris and Xenoacrodontium juglandis (incl. Xenoacrodontium gen. nov. and Xenoacrodontiaceae fam. nov.) from Juglans regia. New Zealand, Cryptometrion metrosideri from twigs of Metrosideros sp., Coccomyces pycnophyllocladi from dead leaves of Phyllocladus alpinus, Hypoderma aliforme from fallen leaves Fuscopora solandri and Hypoderma subiculatum from dead leaves Phormium tenax. Norway, Neodevriesia kalakoutskii from permafrost and Variabilispora viridis from driftwood of Picea abies. Portugal, Entomortierella hereditatis from a biofilm covering a deteriorated limestone wall. Russia, Colpoma junipericola from needles of Juniperus sabina, Entoloma cinnamomeum on soil in grasslands, Entoloma verae on soil in grasslands, Hyphodermella pallidostraminea on a dry dead branch of Actinidia sp., Lepiota sayanensis on litter in a mixed forest, Papiliotrema horticola from Malus communis, Paramacroventuria ribis (incl. Paramacroventuria gen. nov.) from leaves of Ribes aureum and Paramyrothecium lathyri from leaves of Lathyrus tuberosus. South Africa, Harzia combreti from leaf litter of Combretum collinum ssp. sulvense, Penicillium xyleborini from Xyleborinus saxesenii, Phaeoisaria dalbergiae from bark of Dalbergia armata, Protocreopsis euphorbiae from leaf litter of Euphorbia ingens and Roigiella syzygii from twigs of Syzygium chordatum. Spain, Genea zamorana on sandy soil, Gymnopus nigrescens on Scleropodium touretii, Hesperomyces parexochomi on Parexochomus quadriplagiatus, Paraphoma variabilis from dung, Phaeococcomyces kinklidomatophilus from a blackened metal railing of an industrial warehouse and Tuber suaveolens in soil under Quercus faginea. Svalbard and Jan Mayen, Inocybe nivea associated with Salix polaris. Thailand, Biscogniauxia whalleyi on corticated wood. UK, Parasitella quercicola from Quercus robur. USA, Aspergillus arizonicus from indoor air in a hospital, Caeliomyces tampanus (incl. Caeliomyces gen. nov.) from office dust, Cippumomyces mortalis (incl. Cippumomyces gen. nov.) from a tombstone, Cylindrium desperesense from air in a store, Tetracoccosporium pseudoaerium from air sample in house, Toxicocladosporium glendoranum from air in a brick room, Toxicocladosporium losalamitosense from air in a classroom, Valsonectria portsmouthensis from air in men's locker room and Varicosporellopsis americana from sludge in a water reservoir. Vietnam, Entoloma kovalenkoi on rotten wood, Fusarium chuoi inside seed of Musa itinerans, Micropsalliota albofelina on soil in tropical evergreen mixed forests and Phytophthora docyniae from soil and roots of Docynia indica. Morphological and culture characteristics are supported by DNA barcodes. Citation: Crous PW, Osieck ER, Jurjević Ž, et al. 2021. Fungal Planet description sheets: 1284-1382. Persoonia 47: 178-374. https://doi.org/10.3767/persoonia.2021.47.06.
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Affiliation(s)
- P W Crous
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - E R Osieck
- Jkvr. C.M. van Asch van Wijcklaan 19, 3972 ST Driebergen-Rijsenburg, Netherlands
| | - Ž Jurjević
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - J Boers
- Conventstraat 13A, 6701 GA Wageningen, Netherlands
| | - A L van Iperen
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - M Starink-Willemse
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - B Dima
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - S Balashov
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - T S Bulgakov
- Department of Plant Protection, Federal Research Centre the Subtropical Scientific Centre of the Russian Academy of Sciences, Yana Fabritsiusa street 2/28, 354002 Sochi, Krasnodar region, Russia
| | - P R Johnston
- Manaaki Whenua - Landcare Research, P. Bag 92170, Auckland 1142, New Zealand
| | - O V Morozova
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - U Pinruan
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - S Sommai
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - P Alvarado
- ALVALAB, C/ Dr. Fernando Bongera, Severo Ochoa bldg. S1.04, 33006 Oviedo, Spain
| | - C A Decock
- Mycothèque de l'Université catholique de Louvain (MUCL, BCCMTM), Earth and Life Institute - ELIM - Mycology, Université catholique de Louvain, Croix du Sud 2 bte L7.05.06, B-1348 Louvain-la-Neuve, Belgium
| | - T Lebel
- State Herbarium of South Australia, Adelaide, South Australia 5000 Australia
| | | | - G Moreno
- Universidad de Alcalá, Facultad de Ciencias, Departamento de Ciencias de la Vida (Botánica), 28805 Alcalá de Henares, Madrid, Spain
| | - R G Shivas
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Queensland, Australia
| | - L Zhao
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - J Abdollahzadeh
- Department of Plant Protection, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj, Iran
| | - M Abrinbana
- Department of Plant Protection, Faculty of Agriculture, Urmia University, P.O. Box 165, Urmia, Iran
| | - D V Ageev
- LLC 'Signatec', 630090, Inzhenernaya Str. 22, Novosibirsk, Russia
| | - G Akhmetova
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - A V Alexandrova
- Lomonosov Moscow State University (MSU), 119234, 1, 12 Leninskie Gory Str., Moscow, Russia
| | - A Altés
- Universidad de Alcalá, Facultad de Ciencias, Departamento de Ciencias de la Vida (Botánica), 28805 Alcalá de Henares, Madrid, Spain
| | - A G G Amaral
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - C Angelini
- Herbario Jardín Botánico Nacional Dr. Rafael Ma. Moscoso, Santo Domingo, Dominican Republic and Via Cappuccini, 78/8 - 33170 Pordenone, Italy
- Department of Botany, Moravian Museum, Zelný trh 6, 659 37 Brno, Czech Republic
| | - V Antonín
- Department of Botany, Moravian Museum, Zelný trh 6, 659 37 Brno, Czech Republic
| | - F Arenas
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - P Asselman
- Research Group Mycology, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Gent, Belgium
| | - F Badali
- Department of Plant Protection, Faculty of Agriculture, Urmia University, P.O. Box 165, Urmia, Iran
| | - A Baghela
- National Fungal Culture Collection of India (NFCCI)
- Biodiversity and Palaeobiology Group, MACS-Agharkar Research Institute, G.G. Agarkar Road, Pune 411004, Maharashtra, India
| | - A Bañares
- Departamento de Botánica, Ecología y Fisiología Vegetal, Universidad de La Laguna. Apdo. 456, E-38200 La Laguna, Tenerife, Islas Canarias, Spain
| | - R W Barreto
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, 36570-900, MG, Brazil
| | - I G Baseia
- Departamento Botânica e Zoologia, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Campus Universitário, 59072-970 Natal, RN, Brazil
| | - J-M Bellanger
- CEFE, CNRS, Université de Montpellier, Université Paul-Valéry Montpellier 3, EPHE, IRD, INSERM, 1919 route de Mende, F-34293 Montpellier Cedex 5, France
| | - A Berraf-Tebbal
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - A Yu Biketova
- Institute of Biochemistry, Biological Research Centre of the Eötvös Lóránd Research Network, Temesvári blvd. 62, H-6726 Szeged, Hungary
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK
| | - N V Bukharova
- Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of the Russian Academy of Sciences, Pr-t 100-let Vladivostoka 159, 690022 Vladivostok, Russia
| | - T I Burgess
- Phytophthora Science and Management, Harry Butler Institute, Murdoch University, 90 South Street, Murdoch, WA 6150, Australia
| | - J Cabero
- C/ El Sol 6, 49800 Toro, Zamora, Spain
| | - M P S Câmara
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - J F Cano-Lira
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - P Ceryngier
- Institute of Biological Sciences, Cardinal Stefan Wyszyński University, Wóycickiego 1/3, 01-938 Warsaw, Poland
| | - R Chávez
- Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Alameda 3363, Estación Central, 9170022, Santiago, Chile
| | - D A Cowan
- Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
| | - A F de Lima
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - R L Oliveira
- Programa de Pós-Graduação em Sistemática e Evolução, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Av. Senador Salgado Filho, 3000, 59072-970 Natal, RN, Brazil
| | - S Denman
- Forest Research, Alice Holt Lodge, Farnham, Surrey, UK
| | - Q N Dang
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - F Dovana
- Via Quargnento, 17, 15029, Solero (AL), Italy
| | - I G Duarte
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - A Eichmeier
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - A Erhard
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - F Esteve-Raventós
- Universidad de Alcalá, Facultad de Ciencias, Departamento de Ciencias de la Vida (Botánica), 28805 Alcalá de Henares, Madrid, Spain
| | - A Fellin
- Via G. Canestrini 10/B, I-38028, Novella (TN), Italy
| | - G Ferisin
- Associazione Micologica Bassa Friulana, 33052 Cervignano del Friuli, Italy
| | - R J Ferreira
- Programa de Pós-Graduação em Biologia de Fungos, Departamento de Micologia, Universidade Federal de Pernambuco, 50670-420 Recife, PE, Brazil
| | - A Ferrer
- Facultad de Estudios Interdisciplinarios, Núcleo de Química y Bioquímica, Universidad Mayor, Santiago, Chile
| | - P Finy
- Zsombolyai u. 56, 8000 Székesfehérvár, Hungary
| | - E Gaya
- Comparative Fungal Biology, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK
| | - A D W Geering
- Centre for Horticultural Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Dutton Park 4102, Queensland, Australia
| | - C Gil-Durán
- Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Alameda 3363, Estación Central, 9170022, Santiago, Chile
| | - K Glässnerová
- Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01 Prague 2, Czech Republic
| | - A M Glushakova
- Lomonosov Moscow State University (MSU), 119234, 1, 12 Leninskie Gory Str., Moscow, Russia
- Mechnikov Research Institute for Vaccines and Sera, 105064, Moscow, Maly Kazenny by-street, 5A, Russia
| | - D Gramaje
- Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas (CSIC) - Universidad de La Rioja - Gobierno de La Rioja, Ctra. LO-20, Salida 13, 26007, Logroño, Spain
| | | | - A L Guarnizo
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - D Haelewaters
- Research Group Mycology, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Gent, Belgium
- Faculty of Science, University of South Bohemia, Branišovská 31, 370 05 České Budějovice, Czech Republic
| | - R E Halling
- Inst. Systematic Botany, New York Botanical Garden, 2900 Southern Blvd, Bronx, NY, USA 10458-5126
| | - R Hill
- Comparative Fungal Biology, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK
| | - Y Hirooka
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - V Hubka
- Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01 Prague 2, Czech Republic
- Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba, 260-8673, Japan
| | - V A Iliushin
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - D D Ivanova
- The Herzen State Pedagogical University of Russia, 191186, 48 Moyka Embankment, Saint Petersburg, Russia
| | - N E Ivanushkina
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - P Jangsantear
- Forest and Plant Conservation Research Office, Department of National Parks, Wildlife and Plant Conservation, Chatuchak District, Bangkok, Thailand
| | - A Justo
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - A V Kachalkin
- Lomonosov Moscow State University (MSU), 119234, 1, 12 Leninskie Gory Str., Moscow, Russia
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - S Kato
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - P Khamsuntorn
- Microbe Interaction and Ecology Laboratory (BMIE), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - I Y Kirtsideli
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - D G Knapp
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - G A Kochkina
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - O Koukol
- Department of Botany, Charles University, Faculty of Science, Benátská 2, 128 01 Prague 2, Czech Republic
| | - G M Kovács
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - J Kruse
- Pfalzmuseum für Naturkunde - POLLICHIA-Museum, Hermann-Schäfer-Str. 17, 67098 Bad Dürkheim, Germany
| | - T K A Kumar
- Department of Botany, The Zamorin's Guruvayurappan College, Kozhikode, Kerala, India
| | - I Kušan
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - T Læssøe
- Globe Inst./Department of Biology, University of Copenhagen, Universitetsparken 15, 2100 Copenhagen Ø, Denmark, Denmark
| | - E Larsson
- Biological and Environmental Sciences, University of Gothenburg, and Gothenburg Global Biodiversity Centre, Box 461, SE40530 Göteborg, Sweden
| | - R Lebeuf
- 775, rang du Rapide Nord, Saint-Casimir, Quebec, G0A 3L0, Canada
| | - G Levicán
- Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Alameda 3363, Estación Central, 9170022, Santiago, Chile
| | | | - P Marinho
- Departamento de Biologia Celular e Genética, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil
| | - J J Luangsa-Ard
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - E G Lukina
- Saint Petersburg State University, 199034, 7-9 Universitetskaya emb., St. Petersburg, Russia
| | - V Magaña-Dueñas
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | | | - E F Malysheva
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - V F Malysheva
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - B Martín
- Servicio Territorial de Agricultura, Ganadería y Desarrollo Rural de Zamora, C/ Prado Tuerto 17, 49019 Zamora, Spain
| | - M P Martín
- Real Jardín Botánico RJB-CSIC, Plaza de Murillo 2, 28014 Madrid, Spain
| | - N Matočec
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - A R McTaggart
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane 4001, Australia
| | - M Mehrabi-Koushki
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Khuzestan Province, Iran
- Biotechnology and Bioscience Research Center, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - A Mešić
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - A N Miller
- University of Illinois Urbana-Champaign, Illinois Natural History Survey, 1816 South Oak Street, Champaign, Illinois, 61820, USA
| | - P Mironova
- Research Group Mycology, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Gent, Belgium
| | - P-A Moreau
- Université de Lille, Faculté de pharmacie de Lille, EA 4483, F-59000 Lille, France
| | - A Morte
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - K Müller
- Falkstraße 103, D-47058 Duisburg, Germany
| | - L G Nagy
- Institute of Biochemistry, Biological Research Centre of the Eötvös Lóránd Research Network, Temesvári blvd. 62, H-6726 Szeged, Hungary
| | - S Nanu
- Department of Botany, The Zamorin's Guruvayurappan College, Kozhikode, Kerala, India
| | - A Navarro-Ródenas
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - W J Nel
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - T H Nguyen
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - T F Nóbrega
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, 36570-900, MG, Brazil
| | - M E Noordeloos
- Naturalis Biodiversity Center, section Botany, P.O. Box 9517, 2300 RA Leiden, The Netherlands
| | - I Olariaga
- Rey Juan Carlos University, Dep. Biology and Geology, Physics and Inorganic Chemistry, C/ Tulipán s/n, 28933 Móstoles, Madrid, Spain
| | - B E Overton
- 205 East Campus Science Center, Lock Haven University, Department of Biology, Lock Haven, PA 17745, USA
| | - S M Ozerskaya
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - P Palani
- Centre for Advanced Studies in Botany, University of Madras, Guindy Campus, Chennai 600 025, India
| | - F Pancorbo
- Sociedad Micológica de Madrid, Real Jardín Botánico, C/ Claudio Moyano 1, 28014 Madrid, Spain
| | - V Papp
- Department of Botany, Hungarian University of Agriculture and Life Sciences, Ménesi út 44. H-1118 Budapest, Hungary
| | - J Pawłowska
- Institute of Evolutionary Biology, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, ul. Zwirki i Wigury 101, 02-089 Warsaw, Poland
| | - T Q Pham
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - C Phosri
- Biology programme, Faculty of Science, Nakhon Phanom University, Nakhon Phanom, 48000, Thailand
| | - E S Popov
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - A Portugal
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, 3004-531 Coimbra, Portugal
- Fitolab - Laboratory for Phytopathology, Instituto Pedro Nunes, 3030-199 Coimbra, Portugal
| | - A Pošta
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - K Reschke
- Mycology Research Group, Faculty of Biological Sciences, Goethe University Frankfurt am Main, Max-von-Laue Straße 13, 60439 Frankfurt am Main, Germany
| | - M Reul
- Ostenstraße 19, D-95615 Marktredwitz, Germany
| | - G M Ricci
- 205 East Campus Science Center, Lock Haven University, Department of Biology, Lock Haven, PA 17745, USA
| | - A Rodríguez
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - J Romanowski
- Institute of Biological Sciences, Cardinal Stefan Wyszyński University, Wóycickiego 1/3, 01-938 Warsaw, Poland
| | - N Ruchikachorn
- The Institute for the Promotion of Teaching Science and Technology, Bangkok, 10110, Thailand
| | - I Saar
- Institute of Ecology and Earth Sciences, University of Tartu, Ravila Street 14A, 50411 Tartu, Estonia
| | - A Safi
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Khuzestan Province, Iran
| | - B Sakolrak
- Forest and Plant Conservation Research Office, Department of National Parks, Wildlife and Plant Conservation, Chatuchak District, Bangkok, Thailand
| | - F Salzmann
- Kloosterweg 5, 6301WK, Valkenburg a/d Geul, The Netherlands
| | - M Sandoval-Denis
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - E Sangwichein
- Department of Biology, Faculty of Science, Ramkhamhaeng University, Bangkok, 10240, Thailand
| | - L Sanhueza
- Facultad de Estudios Interdisciplinarios, Núcleo de Química y Bioquímica, Universidad Mayor, Santiago, Chile
| | - T Sato
- Department of Agro-Food Science, Niigata Agro-Food University, 2416 Hiranedai, Tainai, Niigata Prefecture, Japan
| | - A Sastoque
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - B Senn-Irlet
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - A Shibata
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - K Siepe
- Geeste 133, D-46342 Velen, Germany
| | - S Somrithipol
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - M Spetik
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - P Sridhar
- Centre for Advanced Studies in Botany, University of Madras, Guindy Campus, Chennai 600 025, India
| | - A M Stchigel
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - K Stuskova
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - N Suwannasai
- Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok, 10110 Thailand
| | - Y P Tan
- Plant Pathology Herbarium, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - R Thangavel
- Plant Health and Environment Laboratory, Ministry for Primary Industries, P.O. Box 2095, Auckland 1140, New Zealand
| | - I Tiago
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, 3004-531 Coimbra, Portugal
| | - S Tiwari
- National Fungal Culture Collection of India (NFCCI)
- Biodiversity and Palaeobiology Group, MACS-Agharkar Research Institute, G.G. Agarkar Road, Pune 411004, Maharashtra, India
| | - Z Tkalčec
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - M A Tomashevskaya
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - C Tonegawa
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - H X Tran
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - N T Tran
- Centre for Horticultural Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Dutton Park 4102, Queensland, Australia
| | - J Trovão
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, 3004-531 Coimbra, Portugal
| | - V E Trubitsyn
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - J Van Wyk
- Department of Plant Soil and Microbial Sciences, 1066 Bogue Street, Michigan State University, East Lansing, MI, 48824 USA
| | - W A S Vieira
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - J Vila
- Passatge del Torn, 4, 17800 Olot, Spain
| | - C M Visagie
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - A Vizzini
- Department of Life Sciences and Systems Biology, University of Torino, Viale P.A. Mattioli 25, I-10125 Torino, Italy
| | - S V Volobuev
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - D T Vu
- Research Planning and International Cooperation Department, Plant Resources Center, An Khanh, Hoai Duc, Hanoi 152900, Vietnam
| | - N Wangsawat
- Department of Biology, Faculty of Science, Srinakharinwirot University, Bangkok, 10110 Thailand
| | - T Yaguchi
- Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba, 260-8673, Japan
| | - E Ercole
- Via Murazzano 11, I-10141, Torino (TO), Italy
| | - B W Ferreira
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, 36570-900, MG, Brazil
| | - A P de Souza
- Laboratório de Microbiologia e Fitopatologia, Universidade Federal de Uberlândia, Monte Carmelo, 38500-000, MG, Brazil
| | - B S Vieira
- Laboratório de Microbiologia e Fitopatologia, Universidade Federal de Uberlândia, Monte Carmelo, 38500-000, MG, Brazil
| | - J Z Groenewald
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
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Sakharuk I, Harner A, McKenzie J, Arfa A, Ullah A, Belakhlef S, Kruse J. Large Primary Neuroendocrine Tumor of the Liver in a 57-year-Old Female Presenting With MSSA Bacteremia. Am Surg 2021; 88:778-780. [PMID: 34734552 DOI: 10.1177/00031348211050825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Primary neuroendocrine tumors (NETs) are rare forms of malignancy, representing just .5% of known cancers and having an overall incidence of 0.2/100,000. The most common sites of origin are bronchopulmonary and gastrointestinal, most commonly the appendix, pancreas, and ileum. We report the case of a 57-year-old female who was admitted for refractory MSSA bacteremia and several weeks of abdominal pain. CT imaging done on presentation demonstrated a 12.5 x 19.4 x 17.3 cm heterogeneous right liver mass with associated mass effect. The patient was taken to the operating room and a right hepatectomy and cholecystectomy were performed without complication. Histological examination revealed necrotic tumor in sheets and nests with marked nuclear pleomorphism. Immunohistochemistry demonstrated positive staining for pancytokeratin, synaptophysin, chromogranin, and TTF-1, consistent with undifferentiated NET. While rare, NETs can originate from a variety of organs outside the gastrointestinal and bronchopulmonary tract, including the liver.
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Affiliation(s)
- Ilya Sakharuk
- Department of Surgery, 160343Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Andrew Harner
- Department of Surgery, 160343Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Janie McKenzie
- Department of Surgery, 160343Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Ahmed Arfa
- Department of Pathology, 160343Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Asad Ullah
- Department of Pathology, 160343Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Sami Belakhlef
- Department of Pathology, 160343Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - J Kruse
- Department of Surgery, 160343Medical College of Georgia at Augusta University, Augusta, GA, USA
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Kruse J, Shim A, Morgan V, Ryan K. Does pull up grip performance influence sprint times in high school female swimmers? J Sci Med Sport 2021. [DOI: 10.1016/j.jsams.2021.09.134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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12
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Crous PW, Osieck ER, Jurjević Ž, Boers J, van Iperen AL, Starink-Willemse M, Dima B, Balashov S, Bulgakov TS, Johnston PR, Morozova OV, Pinruan U, Sommai S, Alvarado P, Decock CA, Lebel T, McMullan-Fisher S, Moreno G, Shivas RG, Zhao L, Abdollahzadeh J, Abrinbana M, Ageev DV, Akhmetova G, Alexandrova AV, Altés A, Amaral AGG, Angelini C, Antonín V, Arenas F, Asselman P, Badali F, Baghela A, Bañares A, Barreto RW, Baseia IG, Bellanger JM, Berraf-Tebbal A, Biketova AY, Bukharova NV, Burgess TI, Cabero J, Câmara MPS, Cano-Lira JF, Ceryngier P, Chávez R, Cowan DA, de Lima AF, Oliveira RL, Denman S, Dang QN, Dovana F, Duarte IG, Eichmeier A, Erhard A, Esteve-Raventós F, Fellin A, Ferisin G, Ferreira RJ, Ferrer A, Finy P, Gaya E, Geering ADW, Gil-Durán C, Glässnerová K, Glushakova AM, Gramaje D, Guard FE, Guarnizo AL, Haelewaters D, Halling RE, Hill R, Hirooka Y, Hubka V, Iliushin VA, Ivanova DD, Ivanushkina NE, Jangsantear P, Justo A, Kachalkin AV, Kato S, Khamsuntorn P, Kirtsideli IY, Knapp DG, Kochkina GA, Koukol O, Kovács GM, Kruse J, Kumar TKA, Kušan I, Læssøe T, Larsson E, Lebeuf R, Levicán G, Loizides M, Marinho P, Luangsa-Ard JJ, Lukina EG, Magaña-Dueñas V, Maggs-Kölling G, Malysheva EF, Malysheva VF, Martín B, Martín MP, Matočec N, McTaggart AR, Mehrabi-Koushki M, Mešić A, Miller AN, Mironova P, Moreau PA, Morte A, Müller K, Nagy LG, Nanu S, Navarro-Ródenas A, Nel WJ, Nguyen TH, Nóbrega TF, Noordeloos ME, Olariaga I, Overton BE, Ozerskaya SM, Palani P, Pancorbo F, Papp V, Pawłowska J, Pham TQ, Phosri C, Popov ES, Portugal A, Pošta A, Reschke K, Reul M, Ricci GM, Rodríguez A, Romanowski J, Ruchikachorn N, Saar I, Safi A, Sakolrak B, Salzmann F, Sandoval-Denis M, Sangwichein E, Sanhueza L, Sato T, Sastoque A, Senn-Irlet B, Shibata A, Siepe K, Somrithipol S, Spetik M, Sridhar P, Stchigel AM, Stuskova K, Suwannasai N, Tan YP, Thangavel R, Tiago I, Tiwari S, Tkalčec Z, Tomashevskaya MA, Tonegawa C, Tran HX, Tran NT, Trovão J, Trubitsyn VE, Van Wyk J, Vieira WAS, Vila J, Visagie CM, Vizzini A, Volobuev SV, Vu DT, Wangsawat N, Yaguchi T, Ercole E, Ferreira BW, de Souza AP, Vieira BS, Groenewald JZ. Fungal Planet description sheets: 1284-1382. Persoonia 2021; 47:178-374. [PMID: 38352974 PMCID: PMC10784667 DOI: 10.3767/persoonia.2023.47.06] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Accepted: 11/04/2021] [Indexed: 02/16/2024]
Abstract
Novel species of fungi described in this study include those from various countries as follows: Antartica, Cladosporium austrolitorale from coastal sea sand. Australia, Austroboletus yourkae on soil, Crepidotus innuopurpureus on dead wood, Curvularia stenotaphri from roots and leaves of Stenotaphrum secundatum and Thecaphora stajsicii from capsules of Oxalis radicosa. Belgium, Paraxerochrysium coryli (incl. Paraxerochrysium gen. nov.) from Corylus avellana. Brazil, Calvatia nordestina on soil, Didymella tabebuiicola from leaf spots on Tabebuia aurea, Fusarium subflagellisporum from hypertrophied floral and vegetative branches of Mangifera indica and Microdochium maculosum from living leaves of Digitaria insularis. Canada, Cuphophyllus bondii from a grassland. Croatia, Mollisia inferiseptata from a rotten Laurus nobilis trunk. Cyprus, Amanita exilis on calcareous soil. Czech Republic, Cytospora hippophaicola from wood of symptomatic Vaccinium corymbosum. Denmark, Lasiosphaeria deviata on pieces of wood and herbaceous debris. Dominican Republic, Calocybella goethei among grass on a lawn. France (Corsica), Inocybe corsica on wet ground. France (French Guiana), Trechispora patawaensis on decayed branch of unknown angiosperm tree and Trechispora subregularis on decayed log of unknown angiosperm tree. Germany, Paramicrothecium sambuci (incl. Paramicrothecium gen. nov.) on dead stems of Sambucus nigra. India, Aureobasidium microtermitis from the gut of a Microtermes sp. termite, Laccaria diospyricola on soil and Phylloporia tamilnadensis on branches of Catunaregam spinosa. Iran, Pythium serotinoosporum from soil under Prunus dulcis. Italy, Pluteus brunneovenosus on twigs of broadleaved trees on the ground. Japan, Heterophoma rehmanniae on leaves of Rehmannia glutinosa f. hueichingensis. Kazakhstan, Murispora kazachstanica from healthy roots of Triticum aestivum. Namibia, Caespitomonium euphorbiae (incl. Caespitomonium gen. nov.) from stems of an Euphorbia sp. Netherlands, Alfaria junci, Myrmecridium junci, Myrmecridium juncicola, Myrmecridium juncigenum, Ophioceras junci, Paradinemasporium junci (incl. Paradinemasporium gen. nov.), Phialoseptomonium junci, Sporidesmiella juncicola, Xenopyricularia junci and Zaanenomyces quadripartis (incl. Zaanenomyces gen. nov.), from dead culms of Juncus effusus, Cylindromonium everniae and Rhodoveronaea everniae from Evernia prunastri, Cyphellophora sambuci and Myrmecridium sambuci from Sambucus nigra, Kiflimonium junci, Sarocladium junci, Zaanenomyces moderatricis-academiae and Zaanenomyces versatilis from dead culms of Juncus inflexus, Microcera physciae from Physcia tenella, Myrmecridium dactylidis from dead culms of Dactylis glomerata, Neochalara spiraeae and Sporidesmium spiraeae from leaves of Spiraea japonica, Neofabraea salicina from Salix sp., Paradissoconium narthecii (incl. Paradissoconium gen. nov.) from dead leaves of Narthecium ossifragum, Polyscytalum vaccinii from Vaccinium myrtillus, Pseudosoloacrosporiella cryptomeriae (incl. Pseudosoloacrosporiella gen. nov.) from leaves of Cryptomeria japonica, Ramularia pararhabdospora from Plantago lanceolata, Sporidesmiella pini from needles of Pinus sylvestris and Xenoacrodontium juglandis (incl. Xenoacrodontium gen. nov. and Xenoacrodontiaceae fam. nov.) from Juglans regia. New Zealand, Cryptometrion metrosideri from twigs of Metrosideros sp., Coccomyces pycnophyllocladi from dead leaves of Phyllocladus alpinus, Hypoderma aliforme from fallen leaves Fuscopora solandri and Hypoderma subiculatum from dead leaves Phormium tenax. Norway, Neodevriesia kalakoutskii from permafrost and Variabilispora viridis from driftwood of Picea abies. Portugal, Entomortierella hereditatis from a biofilm covering a deteriorated limestone wall. Russia, Colpoma junipericola from needles of Juniperus sabina, Entoloma cinnamomeum on soil in grasslands, Entoloma verae on soil in grasslands, Hyphodermella pallidostraminea on a dry dead branch of Actinidia sp., Lepiota sayanensis on litter in a mixed forest, Papiliotrema horticola from Malus communis, Paramacroventuria ribis (incl. Paramacroventuria gen. nov.) from leaves of Ribes aureum and Paramyrothecium lathyri from leaves of Lathyrus tuberosus. South Africa, Harzia combreti from leaf litter of Combretum collinum ssp. sulvense, Penicillium xyleborini from Xyleborinus saxesenii, Phaeoisaria dalbergiae from bark of Dalbergia armata, Protocreopsis euphorbiae from leaf litter of Euphorbia ingens and Roigiella syzygii from twigs of Syzygium chordatum. Spain, Genea zamorana on sandy soil, Gymnopus nigrescens on Scleropodium touretii, Hesperomyces parexochomi on Parexochomus quadriplagiatus, Paraphoma variabilis from dung, Phaeococcomyces kinklidomatophilus from a blackened metal railing of an industrial warehouse and Tuber suaveolens in soil under Quercus faginea. Svalbard and Jan Mayen, Inocybe nivea associated with Salix polaris. Thailand, Biscogniauxia whalleyi on corticated wood. UK, Parasitella quercicola from Quercus robur. USA, Aspergillus arizonicus from indoor air in a hospital, Caeliomyces tampanus (incl. Caeliomyces gen. nov.) from office dust, Cippumomyces mortalis (incl. Cippumomyces gen. nov.) from a tombstone, Cylindrium desperesense from air in a store, Tetracoccosporium pseudoaerium from air sample in house, Toxicocladosporium glendoranum from air in a brick room, Toxicocladosporium losalamitosense from air in a classroom, Valsonectria portsmouthensis from air in men's locker room and Varicosporellopsis americana from sludge in a water reservoir. Vietnam, Entoloma kovalenkoi on rotten wood, Fusarium chuoi inside seed of Musa itinerans, Micropsalliota albofelina on soil in tropical evergreen mixed forests and Phytophthora docyniae from soil and roots of Docynia indica. Morphological and culture characteristics are supported by DNA barcodes. Citation: Crous PW, Osieck ER, Jurjević Ž, et al. 2021. Fungal Planet description sheets: 1284-1382. Persoonia 47: 178-374. https://doi.org/10.3767/persoonia.2021.47.06.
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Affiliation(s)
- P W Crous
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - E R Osieck
- Jkvr. C.M. van Asch van Wijcklaan 19, 3972 ST Driebergen-Rijsenburg, Netherlands
| | - Ž Jurjević
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - J Boers
- Conventstraat 13A, 6701 GA Wageningen, Netherlands
| | - A L van Iperen
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - M Starink-Willemse
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - B Dima
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - S Balashov
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - T S Bulgakov
- Department of Plant Protection, Federal Research Centre the Subtropical Scientific Centre of the Russian Academy of Sciences, Yana Fabritsiusa street 2/28, 354002 Sochi, Krasnodar region, Russia
| | - P R Johnston
- Manaaki Whenua - Landcare Research, P. Bag 92170, Auckland 1142, New Zealand
| | - O V Morozova
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - U Pinruan
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - S Sommai
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - P Alvarado
- ALVALAB, C/ Dr. Fernando Bongera, Severo Ochoa bldg. S1.04, 33006 Oviedo, Spain
| | - C A Decock
- Mycothèque de l'Université catholique de Louvain (MUCL, BCCMTM), Earth and Life Institute - ELIM - Mycology, Université catholique de Louvain, Croix du Sud 2 bte L7.05.06, B-1348 Louvain-la-Neuve, Belgium
| | - T Lebel
- State Herbarium of South Australia, Adelaide, South Australia 5000 Australia
| | | | - G Moreno
- Universidad de Alcalá, Facultad de Ciencias, Departamento de Ciencias de la Vida (Botánica), 28805 Alcalá de Henares, Madrid, Spain
| | - R G Shivas
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Queensland, Australia
| | - L Zhao
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - J Abdollahzadeh
- Department of Plant Protection, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj, Iran
| | - M Abrinbana
- Department of Plant Protection, Faculty of Agriculture, Urmia University, P.O. Box 165, Urmia, Iran
| | - D V Ageev
- LLC 'Signatec', 630090, Inzhenernaya Str. 22, Novosibirsk, Russia
| | - G Akhmetova
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - A V Alexandrova
- Lomonosov Moscow State University (MSU), 119234, 1, 12 Leninskie Gory Str., Moscow, Russia
| | - A Altés
- Universidad de Alcalá, Facultad de Ciencias, Departamento de Ciencias de la Vida (Botánica), 28805 Alcalá de Henares, Madrid, Spain
| | - A G G Amaral
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - C Angelini
- Herbario Jardín Botánico Nacional Dr. Rafael Ma. Moscoso, Santo Domingo, Dominican Republic and Via Cappuccini, 78/8 - 33170 Pordenone, Italy
- Department of Botany, Moravian Museum, Zelný trh 6, 659 37 Brno, Czech Republic
| | - V Antonín
- Department of Botany, Moravian Museum, Zelný trh 6, 659 37 Brno, Czech Republic
| | - F Arenas
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - P Asselman
- Research Group Mycology, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Gent, Belgium
| | - F Badali
- Department of Plant Protection, Faculty of Agriculture, Urmia University, P.O. Box 165, Urmia, Iran
| | - A Baghela
- National Fungal Culture Collection of India (NFCCI)
- Biodiversity and Palaeobiology Group, MACS-Agharkar Research Institute, G.G. Agarkar Road, Pune 411004, Maharashtra, India
| | - A Bañares
- Departamento de Botánica, Ecología y Fisiología Vegetal, Universidad de La Laguna. Apdo. 456, E-38200 La Laguna, Tenerife, Islas Canarias, Spain
| | - R W Barreto
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, 36570-900, MG, Brazil
| | - I G Baseia
- Departamento Botânica e Zoologia, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Campus Universitário, 59072-970 Natal, RN, Brazil
| | - J-M Bellanger
- CEFE, CNRS, Université de Montpellier, Université Paul-Valéry Montpellier 3, EPHE, IRD, INSERM, 1919 route de Mende, F-34293 Montpellier Cedex 5, France
| | - A Berraf-Tebbal
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - A Yu Biketova
- Institute of Biochemistry, Biological Research Centre of the Eötvös Lóránd Research Network, Temesvári blvd. 62, H-6726 Szeged, Hungary
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK
| | - N V Bukharova
- Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of the Russian Academy of Sciences, Pr-t 100-let Vladivostoka 159, 690022 Vladivostok, Russia
| | - T I Burgess
- Phytophthora Science and Management, Harry Butler Institute, Murdoch University, 90 South Street, Murdoch, WA 6150, Australia
| | - J Cabero
- C/ El Sol 6, 49800 Toro, Zamora, Spain
| | - M P S Câmara
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - J F Cano-Lira
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - P Ceryngier
- Institute of Biological Sciences, Cardinal Stefan Wyszyński University, Wóycickiego 1/3, 01-938 Warsaw, Poland
| | - R Chávez
- Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Alameda 3363, Estación Central, 9170022, Santiago, Chile
| | - D A Cowan
- Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
| | - A F de Lima
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - R L Oliveira
- Programa de Pós-Graduação em Sistemática e Evolução, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Av. Senador Salgado Filho, 3000, 59072-970 Natal, RN, Brazil
| | - S Denman
- Forest Research, Alice Holt Lodge, Farnham, Surrey, UK
| | - Q N Dang
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - F Dovana
- Via Quargnento, 17, 15029, Solero (AL), Italy
| | - I G Duarte
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - A Eichmeier
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - A Erhard
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - F Esteve-Raventós
- Universidad de Alcalá, Facultad de Ciencias, Departamento de Ciencias de la Vida (Botánica), 28805 Alcalá de Henares, Madrid, Spain
| | - A Fellin
- Via G. Canestrini 10/B, I-38028, Novella (TN), Italy
| | - G Ferisin
- Associazione Micologica Bassa Friulana, 33052 Cervignano del Friuli, Italy
| | - R J Ferreira
- Programa de Pós-Graduação em Biologia de Fungos, Departamento de Micologia, Universidade Federal de Pernambuco, 50670-420 Recife, PE, Brazil
| | - A Ferrer
- Facultad de Estudios Interdisciplinarios, Núcleo de Química y Bioquímica, Universidad Mayor, Santiago, Chile
| | - P Finy
- Zsombolyai u. 56, 8000 Székesfehérvár, Hungary
| | - E Gaya
- Comparative Fungal Biology, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK
| | - A D W Geering
- Centre for Horticultural Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Dutton Park 4102, Queensland, Australia
| | - C Gil-Durán
- Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Alameda 3363, Estación Central, 9170022, Santiago, Chile
| | - K Glässnerová
- Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01 Prague 2, Czech Republic
| | - A M Glushakova
- Lomonosov Moscow State University (MSU), 119234, 1, 12 Leninskie Gory Str., Moscow, Russia
- Mechnikov Research Institute for Vaccines and Sera, 105064, Moscow, Maly Kazenny by-street, 5A, Russia
| | - D Gramaje
- Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas (CSIC) - Universidad de La Rioja - Gobierno de La Rioja, Ctra. LO-20, Salida 13, 26007, Logroño, Spain
| | | | - A L Guarnizo
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - D Haelewaters
- Research Group Mycology, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Gent, Belgium
- Faculty of Science, University of South Bohemia, Branišovská 31, 370 05 České Budějovice, Czech Republic
| | - R E Halling
- Inst. Systematic Botany, New York Botanical Garden, 2900 Southern Blvd, Bronx, NY, USA 10458-5126
| | - R Hill
- Comparative Fungal Biology, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK
| | - Y Hirooka
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - V Hubka
- Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01 Prague 2, Czech Republic
- Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba, 260-8673, Japan
| | - V A Iliushin
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - D D Ivanova
- The Herzen State Pedagogical University of Russia, 191186, 48 Moyka Embankment, Saint Petersburg, Russia
| | - N E Ivanushkina
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - P Jangsantear
- Forest and Plant Conservation Research Office, Department of National Parks, Wildlife and Plant Conservation, Chatuchak District, Bangkok, Thailand
| | - A Justo
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - A V Kachalkin
- Lomonosov Moscow State University (MSU), 119234, 1, 12 Leninskie Gory Str., Moscow, Russia
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - S Kato
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - P Khamsuntorn
- Microbe Interaction and Ecology Laboratory (BMIE), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - I Y Kirtsideli
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - D G Knapp
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - G A Kochkina
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - O Koukol
- Department of Botany, Charles University, Faculty of Science, Benátská 2, 128 01 Prague 2, Czech Republic
| | - G M Kovács
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117, Budapest, Hungary
| | - J Kruse
- Pfalzmuseum für Naturkunde - POLLICHIA-Museum, Hermann-Schäfer-Str. 17, 67098 Bad Dürkheim, Germany
| | - T K A Kumar
- Department of Botany, The Zamorin's Guruvayurappan College, Kozhikode, Kerala, India
| | - I Kušan
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - T Læssøe
- Globe Inst./Department of Biology, University of Copenhagen, Universitetsparken 15, 2100 Copenhagen Ø, Denmark, Denmark
| | - E Larsson
- Biological and Environmental Sciences, University of Gothenburg, and Gothenburg Global Biodiversity Centre, Box 461, SE40530 Göteborg, Sweden
| | - R Lebeuf
- 775, rang du Rapide Nord, Saint-Casimir, Quebec, G0A 3L0, Canada
| | - G Levicán
- Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Alameda 3363, Estación Central, 9170022, Santiago, Chile
| | | | - P Marinho
- Departamento de Biologia Celular e Genética, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil
| | - J J Luangsa-Ard
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - E G Lukina
- Saint Petersburg State University, 199034, 7-9 Universitetskaya emb., St. Petersburg, Russia
| | - V Magaña-Dueñas
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | | | - E F Malysheva
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - V F Malysheva
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - B Martín
- Servicio Territorial de Agricultura, Ganadería y Desarrollo Rural de Zamora, C/ Prado Tuerto 17, 49019 Zamora, Spain
| | - M P Martín
- Real Jardín Botánico RJB-CSIC, Plaza de Murillo 2, 28014 Madrid, Spain
| | - N Matočec
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - A R McTaggart
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane 4001, Australia
| | - M Mehrabi-Koushki
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Khuzestan Province, Iran
- Biotechnology and Bioscience Research Center, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - A Mešić
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - A N Miller
- University of Illinois Urbana-Champaign, Illinois Natural History Survey, 1816 South Oak Street, Champaign, Illinois, 61820, USA
| | - P Mironova
- Research Group Mycology, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Gent, Belgium
| | - P-A Moreau
- Université de Lille, Faculté de pharmacie de Lille, EA 4483, F-59000 Lille, France
| | - A Morte
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - K Müller
- Falkstraße 103, D-47058 Duisburg, Germany
| | - L G Nagy
- Institute of Biochemistry, Biological Research Centre of the Eötvös Lóránd Research Network, Temesvári blvd. 62, H-6726 Szeged, Hungary
| | - S Nanu
- Department of Botany, The Zamorin's Guruvayurappan College, Kozhikode, Kerala, India
| | - A Navarro-Ródenas
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - W J Nel
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - T H Nguyen
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - T F Nóbrega
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, 36570-900, MG, Brazil
| | - M E Noordeloos
- Naturalis Biodiversity Center, section Botany, P.O. Box 9517, 2300 RA Leiden, The Netherlands
| | - I Olariaga
- Rey Juan Carlos University, Dep. Biology and Geology, Physics and Inorganic Chemistry, C/ Tulipán s/n, 28933 Móstoles, Madrid, Spain
| | - B E Overton
- 205 East Campus Science Center, Lock Haven University, Department of Biology, Lock Haven, PA 17745, USA
| | - S M Ozerskaya
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - P Palani
- Centre for Advanced Studies in Botany, University of Madras, Guindy Campus, Chennai 600 025, India
| | - F Pancorbo
- Sociedad Micológica de Madrid, Real Jardín Botánico, C/ Claudio Moyano 1, 28014 Madrid, Spain
| | - V Papp
- Department of Botany, Hungarian University of Agriculture and Life Sciences, Ménesi út 44. H-1118 Budapest, Hungary
| | - J Pawłowska
- Institute of Evolutionary Biology, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, ul. Zwirki i Wigury 101, 02-089 Warsaw, Poland
| | - T Q Pham
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - C Phosri
- Biology programme, Faculty of Science, Nakhon Phanom University, Nakhon Phanom, 48000, Thailand
| | - E S Popov
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - A Portugal
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, 3004-531 Coimbra, Portugal
- Fitolab - Laboratory for Phytopathology, Instituto Pedro Nunes, 3030-199 Coimbra, Portugal
| | - A Pošta
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - K Reschke
- Mycology Research Group, Faculty of Biological Sciences, Goethe University Frankfurt am Main, Max-von-Laue Straße 13, 60439 Frankfurt am Main, Germany
| | - M Reul
- Ostenstraße 19, D-95615 Marktredwitz, Germany
| | - G M Ricci
- 205 East Campus Science Center, Lock Haven University, Department of Biology, Lock Haven, PA 17745, USA
| | - A Rodríguez
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - J Romanowski
- Institute of Biological Sciences, Cardinal Stefan Wyszyński University, Wóycickiego 1/3, 01-938 Warsaw, Poland
| | - N Ruchikachorn
- The Institute for the Promotion of Teaching Science and Technology, Bangkok, 10110, Thailand
| | - I Saar
- Institute of Ecology and Earth Sciences, University of Tartu, Ravila Street 14A, 50411 Tartu, Estonia
| | - A Safi
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Khuzestan Province, Iran
| | - B Sakolrak
- Forest and Plant Conservation Research Office, Department of National Parks, Wildlife and Plant Conservation, Chatuchak District, Bangkok, Thailand
| | - F Salzmann
- Kloosterweg 5, 6301WK, Valkenburg a/d Geul, The Netherlands
| | - M Sandoval-Denis
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - E Sangwichein
- Department of Biology, Faculty of Science, Ramkhamhaeng University, Bangkok, 10240, Thailand
| | - L Sanhueza
- Facultad de Estudios Interdisciplinarios, Núcleo de Química y Bioquímica, Universidad Mayor, Santiago, Chile
| | - T Sato
- Department of Agro-Food Science, Niigata Agro-Food University, 2416 Hiranedai, Tainai, Niigata Prefecture, Japan
| | - A Sastoque
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - B Senn-Irlet
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - A Shibata
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - K Siepe
- Geeste 133, D-46342 Velen, Germany
| | - S Somrithipol
- Plant Microbe Interaction Research Team (APMT), BIOTEC, National Science and Technology Development Agency, Pathum Thani, Thailand, 113 Thailand Science Park, Phahonyothin Rd., Khlong Nueng, Khlong Luang, Pathum Thani Thailand
| | - M Spetik
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - P Sridhar
- Centre for Advanced Studies in Botany, University of Madras, Guindy Campus, Chennai 600 025, India
| | - A M Stchigel
- Mycology Unit, Medical School, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - K Stuskova
- Mendeleum - Institute of Genetics, Faculty of Horticulture, Mendel University in Brno, Valticka 334, Lednice, 69144, Czech Republic
| | - N Suwannasai
- Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok, 10110 Thailand
| | - Y P Tan
- Plant Pathology Herbarium, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - R Thangavel
- Plant Health and Environment Laboratory, Ministry for Primary Industries, P.O. Box 2095, Auckland 1140, New Zealand
| | - I Tiago
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, 3004-531 Coimbra, Portugal
| | - S Tiwari
- National Fungal Culture Collection of India (NFCCI)
- Biodiversity and Palaeobiology Group, MACS-Agharkar Research Institute, G.G. Agarkar Road, Pune 411004, Maharashtra, India
| | - Z Tkalčec
- Laboratory for Biological Diversity, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - M A Tomashevskaya
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - C Tonegawa
- Department of Clinical Plant Science, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - H X Tran
- Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, 46 Duc Thang Ward, Bac Tu Liem District, Hanoi City, Vietnam
| | - N T Tran
- Centre for Horticultural Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Dutton Park 4102, Queensland, Australia
| | - J Trovão
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, 3004-531 Coimbra, Portugal
| | - V E Trubitsyn
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290, Pushchino, pr. Nauki, 5, Russia
| | - J Van Wyk
- Department of Plant Soil and Microbial Sciences, 1066 Bogue Street, Michigan State University, East Lansing, MI, 48824 USA
| | - W A S Vieira
- Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Recife, Pernambuco, Brazil
| | - J Vila
- Passatge del Torn, 4, 17800 Olot, Spain
| | - C M Visagie
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - A Vizzini
- Department of Life Sciences and Systems Biology, University of Torino, Viale P.A. Mattioli 25, I-10125 Torino, Italy
| | - S V Volobuev
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376, 2 Prof. Popov Str., Saint Petersburg, Russia
| | - D T Vu
- Research Planning and International Cooperation Department, Plant Resources Center, An Khanh, Hoai Duc, Hanoi 152900, Vietnam
| | - N Wangsawat
- Department of Biology, Faculty of Science, Srinakharinwirot University, Bangkok, 10110 Thailand
| | - T Yaguchi
- Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba, 260-8673, Japan
| | - E Ercole
- Via Murazzano 11, I-10141, Torino (TO), Italy
| | - B W Ferreira
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, 36570-900, MG, Brazil
| | - A P de Souza
- Laboratório de Microbiologia e Fitopatologia, Universidade Federal de Uberlândia, Monte Carmelo, 38500-000, MG, Brazil
| | - B S Vieira
- Laboratório de Microbiologia e Fitopatologia, Universidade Federal de Uberlândia, Monte Carmelo, 38500-000, MG, Brazil
| | - J Z Groenewald
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
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Biener L, Kruse J, Tuleta I, Pizarro C, Kreuter M, Birring SS, Nickenig G, Skowasch D. Association of proangiogenic and profibrotic serum markers with lung function and quality of life in sarcoidosis. PLoS One 2021; 16:e0247197. [PMID: 33617593 PMCID: PMC7899331 DOI: 10.1371/journal.pone.0247197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Accepted: 02/02/2021] [Indexed: 11/18/2022] Open
Abstract
Background Sarcoidosis is a systemic inflammatory granulomatous disease, frequently affecting the lung. If left untreated, it may end in lung fibrosis. Proangiogenic and profibrotic vascular endothelial growth factor (VEGF), transforming growth factor (TGF)-β1, fibroblast growth factor (FGF)-2 and platelet-derived growth factor (PDGF)-AB are a known therapeutical target in pulmonary fibrosing diseases, e.g. IPF, but there is no targeted therapy option for pulmonary fibrosis in sarcoidosis. Objectives The aim of our study was to determine the association of these markers’ serum levels on lung function and the patients’ quality of life in a long-term follow-up of sarcoidosis patients, to provide further information for finding targeted therapy options for pulmonary sarcoidosis. Methods 54 patients with sarcoidosis underwent blood sampling, pulmonary function testing and answered the King’s Brief Interstitial Lung Disease (K-BILD) questionnaire at baseline and at three-years follow-up. Serum levels of profibrotic and angiogenic markers were assessed at baseline by enzyme-linked immunosorbent assay. Results Between 2015 and 2018, 54 patients with biopsy proven sarcoidosis were enrolled. Throughout the observation period, there was a significant decrease in the diffusion capacity for carbon monoxide (DLCO) [%] (-6.5504 ± 13,39, p = 0.001) and forced expiratory volume in one second predicted (FEV1) [%] (-6.07 ± 12.09, p = 0.001). Patients with greater impairment of forced vital capacity (FVC) did have significantly higher serum levels of VEGF (p = 0.03) and PDGF-AB (p<0.001). The K-BILD questionnaire did not change significantly during follow-up. However, patients with worsening K-BILD scores did have significantly higher serum-levels of PDGF-AB (2.67 pg/ml ± 0.93 vs. 1.88 pg/ml ± 0.60, p = 0.004) at baseline, compared to those with unchanged or increasing K-BILD scores. Conclusions Among patients with pulmonary sarcoidosis, baseline serum levels of VEGF and PDGF-AB were associated with pulmonary function impairment. Furthermore, PDGF-AB was associated with worsening K-BILD scores. No such association was observed for FGF-2 and TGF-ß1. VEGF and PDGF-AB may be possible prognostic and therapeutic targets in sarcoidosis as a fibrosing ILD beyond IPF.
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Affiliation(s)
- L. Biener
- Department of Internal Medicine II–Cardiology, Pneumology and Angiology, University Hospital Bonn, Bonn, Germany
- * E-mail:
| | - J. Kruse
- Department of Internal Medicine II–Cardiology, Pneumology and Angiology, University Hospital Bonn, Bonn, Germany
| | - I. Tuleta
- Department of Cardiology I, University Hospital Muenster, Muenster, Germany
| | - C. Pizarro
- Department of Internal Medicine II–Cardiology, Pneumology and Angiology, University Hospital Bonn, Bonn, Germany
| | - M. Kreuter
- Centre for Interstitial and Rare Lung Diseases, Pneumology, Thoraxklinik, University of Heidelberg, Germany and German Centre for Lung Research, Heidelberg, Germany
| | - S. S. Birring
- Centre for Human & Applied Physiological Sciences, School of Basic & Medical Biosciences, Faculty of Life Sciences & Medicine, King’s College London, London, United Kingdom
| | - G. Nickenig
- Department of Internal Medicine II–Cardiology, Pneumology and Angiology, University Hospital Bonn, Bonn, Germany
| | - D. Skowasch
- Department of Internal Medicine II–Cardiology, Pneumology and Angiology, University Hospital Bonn, Bonn, Germany
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Kruse J, McTaggart AR, Dhileepan K, Musili PM, Mutie FM, Ntandu JE, Edogbanya PRO, Chukwuma EC, Shivas RG. Broad and narrow host ranges in resolved species of Cintractia limitata s. lat. (Anthracoideaceae, Ustilaginomycotina) on Cyperus. Mycol Prog 2021. [DOI: 10.1007/s11557-020-01664-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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15
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Jiang L, Atasoy S, Johar H, Herder C, Peters A, Kruse J, Ladwig KH. Anxiety boosts progression of prediabetes to type 2 diabetes: findings from the prospective Cooperative Health Research in the Region of Augsburg F4 and FF4 studies. Diabet Med 2020; 37:1737-1741. [PMID: 31943340 DOI: 10.1111/dme.14232] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 01/09/2020] [Indexed: 01/14/2023]
Abstract
AIM To investigate the association between anxiety symptoms and the progression from prediabetes to type 2 diabetes. METHODS A sample of 1708 participants aged 31-82 years from the population-based Cooperative Health Research in the Region of Augsburg F4 and the follow-up Cooperative Health Research in the Region of Augsburg FF4 studies was included. Prediabetes was defined as impaired fasting glucose and/or impaired glucose tolerance, and anxiety status was measured by the generalized anxiety disorder-7 questionnaire. Newly diagnosed type 2 diabetes cases were identified after 6.5 years (11 102 person-years) and confirmed by medical records. Multivariate logistic regression analyses were employed to estimate the effect of prediabetes and anxiety on the incidence of type 2 diabetes with different levels of adjustments for potential confounders. The population attributable risk of type 2 diabetes in participants with prediabetes and anxiety was estimated. RESULTS Prediabetes at baseline was prevalent in 247 participants, of whom 77 developed diabetes after follow-up, accounting for a progression rate of 31%. In participants with prediabetes, high anxiety was associated with a 3-fold increased risk of progression to type 2 diabetes in comparison with low anxiety, even after accounting for socio-demographic, lifestyle and metabolic risk factors (OR = 2.82, 95% CI = 0.95-8.37, P = 0.06). A significant proportion of incident type 2 diabetes was attributed to having anxiety in addition to prediabetes (attributable risk proportion: 0.52; 95% CI = 0.004-1.04, P = 0.05). CONCLUSIONS Anxiety symptoms independently increase the progression risk of prediabetes to type 2 diabetes and should be routinely considered alongside the traditional risk factors in people with prediabetes.
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Affiliation(s)
- L Jiang
- Institute for Medical Information Processing, Biometry and Epidemiology - IBE, LMU Munich, Munich, Germany
- Pettenkofer School of Public Health, Munich, Germany
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - S Atasoy
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- German Center for Diabetes Research (DZD), München-Neuherberg, Germany
- Department of Psychosomatic Medicine and Psychotherapy, University of Gießen and Marburg, Gießen, Germany
| | - H Johar
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- German Center for Diabetes Research (DZD), München-Neuherberg, Germany
- Department of Psychosomatic Medicine and Psychotherapy, University of Gießen and Marburg, Gießen, Germany
| | - C Herder
- German Center for Diabetes Research (DZD), München-Neuherberg, Germany
- Division of Endocrinology and Diabetology, Medical Faculty, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
- Institute for Clinical Diabetology, German Diabetes Center, Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf, Düsseldorf, Germany
| | - A Peters
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- German Center for Diabetes Research (DZD), München-Neuherberg, Germany
| | - J Kruse
- Department of Psychosomatic Medicine and Psychotherapy, University of Gießen and Marburg, Gießen, Germany
| | - K-H Ladwig
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- German Center for Diabetes Research (DZD), München-Neuherberg, Germany
- Department of Psychosomatic Medicine and Psychotherapy, Klinikum rechts der Isar, Technische Universität München, München, Germany
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Colocho Hurtarte LC, Santana Amorim HC, Kruse J, Criginski Cezar J, Klysubun W, Prietzel J. A Novel Approach for the Quantification of Different Inorganic and Organic Phosphorus Compounds in Environmental Samples by P L 2,3-Edge X-ray Absorption Near-Edge Structure (XANES) Spectroscopy. Environ Sci Technol 2020; 54:2812-2820. [PMID: 32068384 DOI: 10.1021/acs.est.9b07018] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Phosphorus (P) is an essential element for life on Earth, with an important and oftentimes unaccounted organic biogeochemical component. Current methods for the quantification of different organic P compounds in environmental samples (e.g., soils, sediments) are based on extraction techniques and often associated with incomplete P recovery or sample changes. In this study, we present a protocol for the quantification of different organic and inorganic P species in soils using synchrotron-based X-ray absorption near-edge structure (XANES) spectroscopy at the P L2,3-edge. Its accuracy and precision was evaluated by analyzing 40 standard mixtures composed of seven different inorganic and organic P compounds (with a mean of R2 = 0.85). In addition, we quantified the P species of two soils and two agro-industrial byproducts using P L2,3-edge XANES spectroscopy and the results were compared with those obtained by P K-edge XANES or 31P NMR spectroscopy. Using the P L2,3-edge, we identified different organic P species, including those not identified by the common P K-edge XANES. However, there is a consistent underestimation of organic polyphosphates. Overall, the application of P L2,3-edge XANES provides a higher level of information than by P K-edge XANES, although the ubiquitous use of this novel methodology is still limited to samples with a phosphorus content above 3 mg g-1.
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Affiliation(s)
- Luis Carlos Colocho Hurtarte
- Lehrstuhl für Bodenkunde, Research Department Ecology and Ecosystem Management, Technische Universität München, Emil-Ramann-Straße 2, 85354 Freising, Germany
| | - Helen Carla Santana Amorim
- Universidade Federal de Lavras, Departamento de Ciência do Solo, 1001 Av. Doutor Silvio Menicucci, Lavras, MG 37200-000, Brazil
| | - Jens Kruse
- Institute of Bio- and Geosciences, Agrosphere Institute (IBG-3), Forschungszentrum Jülich GmbH, Wilhelm Johnen Straße, 52425 Jülich, Germany
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Julio Criginski Cezar
- Laboratório Nacional de Luz Síncrotron (LNLS) -Centro Nacional de Pesquisa em Energia e Materiais (CNPEM), Campinas, SP 13083-971, Brazil
| | - Wantana Klysubun
- Synchrotron Light Research Institute, Muang District, 111 University Avenue, Nakhon Ratchasima 30000, Thailand
| | - Jörg Prietzel
- Lehrstuhl für Bodenkunde, Research Department Ecology and Ecosystem Management, Technische Universität München, Emil-Ramann-Straße 2, 85354 Freising, Germany
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Kruse J, Koch M, Khoi CM, Braun G, Sebesvari Z, Amelung W. Land use change from permanent rice to alternating rice-shrimp or permanent shrimp in the coastal Mekong Delta, Vietnam: Changes in the nutrient status and binding forms. Sci Total Environ 2020; 703:134758. [PMID: 31767321 DOI: 10.1016/j.scitotenv.2019.134758] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2019] [Revised: 09/28/2019] [Accepted: 09/29/2019] [Indexed: 06/10/2023]
Abstract
Saline water intrusion has become a severe threat in the coastal areas of Mekong delta of Vietnam, though offering farmers the option to diversify their land use, and switching, for instance, from permanent rice to alternating rice-shrimp systems or even to permanent shrimp systems. The objective of this study was to evaluate the respective impacts on soil salinity, nutrient status and their binding forms. Hence, we sampled the topsoils (cultivation layer, 0-15 cm) from 10 permanent rice systems and the rice platforms of 10 alternating riceshrimp systems. Furthermore, the sludges and the soils 10 cm underneath of the sludges from the ditches of the alternating rice-shrimp as well as from ponds of the permanent shrimp systems were sampled in Bến Tre and Sóc Trăng provinces, Vietnam, respectively. The samples were analyzed regarding their electric conductivity, total and plant-available nutrient contents. To reveal possible changes in nutrient binding forms, sequential P and S extraction, 31P-nuclear magnetic resonance spectroscopy, and S and P X-ray absorption near edge structure spectroscopy were applied. The results showed that permanent and alternating shrimp cultivation lead to elevated salt concentrations but also improved the overall nutrient status relative to the permanent rice management and especially in the sludges relative to the soils underneath. The continued deposition of shrimp and feed debris promoted the accrual of stable, Ca- and Mg-associated P forms as well as of P-monoesters, whereas the S forms were depleted in thiophene S groups but enriched in sulfides relative to permanent rice fields. As effects by alternating rice-shrimp management were intermediate, this management has more potential to serve as a no-regret strategy for farmers to remain flexible in their response to climate changes and concurrent salinity intrusion relative to permanent shrimp production, which requires strict maintenance of adequate salinity levels also during the rainy season.
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Affiliation(s)
- Jens Kruse
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115 Bonn, Germany; Institute for Bio- and Geosciences - IBG-3, Agrosphere, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany.
| | - Maximilian Koch
- Institute for Bio- and Geosciences - IBG-3, Agrosphere, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany
| | - Chau Minh Khoi
- Soil Science Department, College of Agriculture and Applied Biological Sciences, Can Tho University, 3/2 Street, Can Tho City, Viet Nam
| | - Gianna Braun
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, Bonn 53113, Germany
| | - Zita Sebesvari
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, Bonn 53113, Germany
| | - Wulf Amelung
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115 Bonn, Germany
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Braun G, Braun M, Kruse J, Amelung W, Renaud FG, Khoi CM, Duong MV, Sebesvari Z. Pesticides and antibiotics in permanent rice, alternating rice-shrimp and permanent shrimp systems of the coastal Mekong Delta, Vietnam. Environ Int 2019; 127:442-451. [PMID: 30959309 DOI: 10.1016/j.envint.2019.03.038] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2018] [Revised: 02/18/2019] [Accepted: 03/14/2019] [Indexed: 06/09/2023]
Abstract
BACKGROUND Salinity intrusion into coastal regions is an increasing threat to agricultural production of salt sensitive crops like paddy rice. In the coastal Mekong Delta, farmers respond by shifting to more salinity tolerant agricultural production systems such as alternating rice-shrimp and permanent shrimp. While shrimps are sensitive to pesticide residues used on rice, the use of antibiotics in shrimp farming can cause contamination in rice crops. These patterns of cross-contamination are not well documented empirically in the rapidly changing agricultural landscape. OBJECTIVE AND METHODS Our objective was to understand changing pollution patterns induced by shifts in agricultural land use system. We addressed this by i) documenting pesticide and antibiotic use in three different agriculture land use systems (permanent rice, alternating rice-shrimp and permanent shrimp), and by ii) determining residues of pesticides and antibiotics in top soil layers of these three land use systems. Samples were taken in Sóc Trăng and Bến Tre province in the Mekong Delta, Vietnam. Chemical analyses comprised 12 of the most commonly used pesticides in rice paddies and six common antibiotics used in shrimp production. RESULTS Results showed that residues of pesticides were present in all agricultural land use systems, including shrimp aquaculture. Active ingredients were mostly fungicides with a maximum concentration of 67 μg kg-1 found for isoprothiolane in permanent rice systems, followed by alternating rice-shrimp and permanent shrimp systems. Furthermore, antibiotics were present ubiquitously, with fluoroquinolones accumulating to larger amounts than sulfonamides and diaminopyrimidines. All concentrations were below critical lethal threshold values. CONCLUSION Overall, farmers were most conscious of agrochemical use in alternating rice-shrimp systems to prevent harm to shrimps, which was reflected in overall lower concentrations of agrochemicals when compared to rice systems. Thus, alternating rice-shrimp systems present a low risk option in terms of food safety, which may bring additional benefits to this so far rather low-input system in brackish water transition zone.
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Affiliation(s)
- G Braun
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, 53113 Bonn, Germany.
| | - M Braun
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115 Bonn, Germany
| | - J Kruse
- Institute for Bio- and Geosciences - IBG-3, Agrosphere, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany
| | - W Amelung
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115 Bonn, Germany
| | - F G Renaud
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, 53113 Bonn, Germany
| | - C M Khoi
- Soil Science Department, Can Tho University, 3/2 Street, Can Tho city, Viet Nam
| | - M V Duong
- Soil Science Department, Can Tho University, 3/2 Street, Can Tho city, Viet Nam
| | - Z Sebesvari
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, 53113 Bonn, Germany
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Crous P, Carnegie A, Wingfield M, Sharma R, Mughini G, Noordeloos M, Santini A, Shouche Y, Bezerra J, Dima B, Guarnaccia V, Imrefi I, Jurjević Ž, Knapp D, Kovács G, Magistà D, Perrone G, Rämä T, Rebriev Y, Shivas R, Singh S, Souza-Motta C, Thangavel R, Adhapure N, Alexandrova A, Alfenas A, Alfenas R, Alvarado P, Alves A, Andrade D, Andrade J, Barbosa R, Barili A, Barnes C, Baseia I, Bellanger JM, Berlanas C, Bessette A, Bessette A, Biketova A, Bomfim F, Brandrud T, Bransgrove K, Brito A, Cano-Lira J, Cantillo T, Cavalcanti A, Cheewangkoon R, Chikowski R, Conforto C, Cordeiro T, Craine J, Cruz R, Damm U, de Oliveira R, de Souza J, de Souza H, Dearnaley J, Dimitrov R, Dovana F, Erhard A, Esteve-Raventós F, Félix C, Ferisin G, Fernandes R, Ferreira R, Ferro L, Figueiredo C, Frank J, Freire K, García D, Gené J, Gêsiorska A, Gibertoni T, Gondra R, Gouliamova D, Gramaje D, Guard F, Gusmão L, Haitook S, Hirooka Y, Houbraken J, Hubka V, Inamdar A, Iturriaga T, Iturrieta-González I, Jadan M, Jiang N, Justo A, Kachalkin A, Kapitonov V, Karadelev M, Karakehian J, Kasuya T, Kautmanová I, Kruse J, Kušan I, Kuznetsova T, Landell M, Larsson KH, Lee H, Lima D, Lira C, Machado A, Madrid H, Magalhães O, Majerova H, Malysheva E, Mapperson R, Marbach P, Martín M, Martín-Sanz A, Matočec N, McTaggart A, Mello J, Melo R, Mešić A, Michereff S, Miller A, Minoshima A, Molinero-Ruiz L, Morozova O, Mosoh D, Nabe M, Naik R, Nara K, Nascimento S, Neves R, Olariaga I, Oliveira R, Oliveira T, Ono T, Ordoñez M, Ottoni ADM, Paiva L, Pancorbo F, Pant B, Pawłowska J, Peterson S, Raudabaugh D, Rodríguez-Andrade E, Rubio E, Rusevska K, Santiago A, Santos A, Santos C, Sazanova N, Shah S, Sharma J, Silva B, Siquier J, Sonawane M, Stchigel A, Svetasheva T, Tamakeaw N, Telleria M, Tiago P, Tian C, Tkalčec Z, Tomashevskaya M, Truong H, Vecherskii M, Visagie C, Vizzini A, Yilmaz N, Zmitrovich I, Zvyagina E, Boekhout T, Kehlet T, Læssøe T, Groenewald J. Fungal Planet description sheets: 868-950. Persoonia 2019; 42:291-473. [PMID: 31551622 PMCID: PMC6712538 DOI: 10.3767/persoonia.2019.42.11] [Citation(s) in RCA: 90] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Accepted: 05/10/2019] [Indexed: 12/11/2022]
Abstract
Novel species of fungi described in this study include those from various countries as follows: Australia, Chaetomella pseudocircinoseta and Coniella pseudodiospyri on Eucalyptus microcorys leaves, Cladophialophora eucalypti, Teratosphaeria dunnii and Vermiculariopsiella dunnii on Eucalyptus dunnii leaves, Cylindrium grande and Hypsotheca eucalyptorum on Eucalyptus grandis leaves, Elsinoe salignae on Eucalyptus saligna leaves, Marasmius lebeliae on litter of regenerating subtropical rainforest, Phialoseptomonium eucalypti (incl. Phialoseptomonium gen. nov.) on Eucalyptus grandis × camaldulensis leaves, Phlogicylindrium pawpawense on Eucalyptus tereticornis leaves, Phyllosticta longicauda as an endophyte from healthy Eustrephus latifolius leaves, Pseudosydowia eucalyptorum on Eucalyptus sp. leaves, Saitozyma wallum on Banksia aemula leaves, Teratosphaeria henryi on Corymbia henryi leaves. Brazil, Aspergillus bezerrae, Backusella azygospora, Mariannaea terricola and Talaromyces pernambucoensis from soil, Calonectria matogrossensis on Eucalyptus urophylla leaves, Calvatia brasiliensis on soil, Carcinomyces nordestinensis on Bromelia antiacantha leaves, Dendryphiella stromaticola on small branches of an unidentified plant, Nigrospora brasiliensis on Nopalea cochenillifera leaves, Penicillium alagoense as a leaf endophyte on a Miconia sp., Podosordaria nigrobrunnea on dung, Spegazzinia bromeliacearum as a leaf endophyte on Tilandsia catimbauensis, Xylobolus brasiliensis on decaying wood. Bulgaria, Kazachstania molopis from the gut of the beetle Molops piceus. Croatia, Mollisia endocrystallina from a fallen decorticated Picea abies tree trunk. Ecuador, Hygrocybe rodomaculata on soil. Hungary, Alfoldia vorosii (incl. Alfoldia gen. nov.) from Juniperus communis roots, Kiskunsagia ubrizsyi (incl. Kiskunsagia gen. nov.) from Fumana procumbens roots. India, Aureobasidium tremulum as laboratory contaminant, Leucosporidium himalayensis and Naganishia indica from windblown dust on glaciers. Italy, Neodevriesia cycadicola on Cycas sp. leaves, Pseudocercospora pseudomyrticola on Myrtus communis leaves, Ramularia pistaciae on Pistacia lentiscus leaves, Neognomoniopsis quercina (incl. Neognomoniopsis gen. nov.) on Quercus ilex leaves. Japan, Diaporthe fructicola on Passiflora edulis × P. edulis f. flavicarpa fruit, Entoloma nipponicum on leaf litter in a mixed Cryptomeria japonica and Acer spp. forest. Macedonia, Astraeus macedonicus on soil. Malaysia, Fusicladium eucalyptigenum on Eucalyptus sp. twigs, Neoacrodontiella eucalypti (incl. Neoacrodontiella gen. nov.) on Eucalyptus urophylla leaves. Mozambique, Meliola gorongosensis on dead Philenoptera violacea leaflets. Nepal, Coniochaeta dendrobiicola from Dendriobium lognicornu roots. New Zealand, Neodevriesia sexualis and Thozetella neonivea on Archontophoenix cunninghamiana leaves. Norway, Calophoma sandfjordenica from a piece of board on a rocky shoreline, Clavaria parvispora on soil, Didymella finnmarkica from a piece of Pinus sylvestris driftwood. Poland, Sugiyamaella trypani from soil. Portugal, Colletotrichum feijoicola from Acca sellowiana. Russia, Crepidotus tobolensis on Populus tremula debris, Entoloma ekaterinae, Entoloma erhardii and Suillus gastroflavus on soil, Nakazawaea ambrosiae from the galleries of Ips typographus under the bark of Picea abies. Slovenia, Pluteus ludwigii on twigs of broadleaved trees. South Africa, Anungitiomyces stellenboschiensis (incl. Anungitiomyces gen. nov.) and Niesslia stellenboschiana on Eucalyptus sp. leaves, Beltraniella pseudoportoricensis on Podocarpus falcatus leaf litter, Corynespora encephalarti on Encephalartos sp. leaves, Cytospora pavettae on Pavetta revoluta leaves, Helminthosporium erythrinicola on Erythrina humeana leaves, Helminthosporium syzygii on a Syzygium sp. bark canker, Libertasomyces aloeticus on Aloe sp. leaves, Penicillium lunae from Musa sp. fruit, Phyllosticta lauridiae on Lauridia tetragona leaves, Pseudotruncatella bolusanthi (incl. Pseudotruncatellaceae fam. nov.) and Dactylella bolusanthi on Bolusanthus speciosus leaves. Spain, Apenidiella foetida on submerged plant debris, Inocybe grammatoides on Quercus ilex subsp. ilex forest humus, Ossicaulis salomii on soil, Phialemonium guarroi from soil. Thailand, Pantospora chromolaenae on Chromolaena odorata leaves. Ukraine, Cadophora helianthi from Helianthus annuus stems. USA, Boletus pseudopinophilus on soil under slash pine, Botryotrichum foricae, Penicillium americanum and Penicillium minnesotense from air. Vietnam, Lycoperdon vietnamense on soil. Morphological and culture characteristics are supported by DNA barcodes.
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Affiliation(s)
- P.W. Crous
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
| | - A.J. Carnegie
- Forest Health & Biosecurity, NSW Department of Primary Industries, Forestry, Level 12, 10 Valentine Ave, Parramatta NSW 2150, Australia
| | - M.J. Wingfield
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
| | - R. Sharma
- National Centre for Microbial Resource (NCMR), National Centre for Cell Science, S.P. Pune University, Ganeshkhind, Pune 411 007, Maharashtra, India
| | - G. Mughini
- Research Center for Forestry and Wood - C.R.E.A., Via Valle della Quistione 27, 00166 Rome, Italy
| | - M.E. Noordeloos
- Naturalis Biodiversity Center, section Botany, P.O. Box 9517, 2300 RA Leiden, The Netherlands
| | - A. Santini
- Institute for Sustainable Plant Protection - C.N.R., Via Madonna del Piano 10, 50019 Sesto fiorentino (FI), Italy
| | - Y.S. Shouche
- National Centre for Microbial Resource (NCMR), National Centre for Cell Science, S.P. Pune University, Ganeshkhind, Pune 411 007, Maharashtra, India
| | - J.D.P. Bezerra
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - B. Dima
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, 1117 Budapest, Pázmány Péter sétány 1/C, Hungary
| | - V. Guarnaccia
- DiSAFA, University of Torino, Largo Paolo Braccini, 2, 10095 Grugliasco, TO, Italy
| | - I. Imrefi
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, 1117 Budapest, Pázmány Péter sétány 1/C, Hungary
| | - Ž. Jurjević
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077, USA
| | - D.G. Knapp
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, 1117 Budapest, Pázmány Péter sétány 1/C, Hungary
| | - G.M. Kovács
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, 1117 Budapest, Pázmány Péter sétány 1/C, Hungary
| | - D. Magistà
- Institute of Sciences of Food Production, CNR, Via Amendola 122/O, 70126 Bari, Italy
| | - G. Perrone
- Institute of Sciences of Food Production, CNR, Via Amendola 122/O, 70126 Bari, Italy
| | - T. Rämä
- Marbio, Norwegian College of Fishery Science, University of Tromsø - The Arctic University of Norway
| | - Y.A. Rebriev
- South Scientific Center of the Russian Academy of Sciences, Rostov-on-Don, Russia
| | - R.G. Shivas
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Australia
| | - S.M. Singh
- National Centre for Antarctic and Ocean Research, Headland Sada, Vasco-da-Gama-403 804, Goa, India
- Banaras Hindu University (BHU), Uttar Pradesh, India
| | - C.M. Souza-Motta
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - R. Thangavel
- Plant Health and Environment Laboratory, Ministry for Primary Industries, P.O. Box 2095, Auckland 1140, New Zealand
| | - N.N. Adhapure
- Department of Biotechnology and Microbiology, Vivekanand Arts, Sardar Dalipsingh Commerce and Science College, Aurangabad 431001, Maharashtra, India
| | - A.V. Alexandrova
- Lomonosov Moscow State University (MSU), Faculty of Biology, 119234, 1, 12 Leninskie Gory Str., Moscow, Russia
- Joint Russian-Vietnamese Tropical Research and Technological Center, Hanoi, Vietnam
| | - A.C. Alfenas
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Brazil
| | - R.F. Alfenas
- Departamento de Engenharia Florestal, Universidade Federal de Mato Grosso, Cuiabá, Brazil
| | - P. Alvarado
- ALVALAB, Avda. de Bruselas 2-3B, 33011 Oviedo, Spain
| | - A.L. Alves
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - D.A. Andrade
- Instituto de Ciências Biológicas e da Saúde – ICBS, Universidade Federal de Alagoas, Maceió, Brazil
| | - J.P. Andrade
- Universidade Estadual de Feira de Santana, Av. Transnordestina, S/N – Novo Horizonte, 44036-900 Feira de Santana, BA, Brazil
| | - R.N. Barbosa
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - A. Barili
- Escuela de Ciencias Biológicas, Pontificia Universidad Católica del Ecuador, Av. 12 de octubre 1076 y Roca, Quito, Ecuador
| | - C.W. Barnes
- Escuela de Ciencias Biológicas, Pontificia Universidad Católica del Ecuador, Av. 12 de octubre 1076 y Roca, Quito, Ecuador
| | - I.G. Baseia
- Departamento Botânica e Zoologia, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Campus Universitário, 59072-970, Natal, RN, Brazil
| | - J.-M. Bellanger
- CEFE – CNRS – Université de Montpellier – Université Paul-Valéry Montpellier – EPHE – IRD – INSERM, Campus CNRS, 1919 Route de Mende, 34293 Montpellier, France
| | - C. Berlanas
- Instituto de Ciencias de la Vid y del Vino (Gobierno de La Rioja-CSIC-Universidad de La Rioja), Ctra. LO-20, Salida 13, 26007 Logroño, La Rioja, Spain
| | | | | | - A.Yu. Biketova
- Synthetic and Systems Biology Unit, Biological Research Centre, Hungarian Academy of Sciences, H-6726 Szeged, Hungary
| | - F.S. Bomfim
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - T.E. Brandrud
- Norwegian Institute for Nature Research, Gaustadalléen 21, NO-0349 Oslo, Norway
| | - K. Bransgrove
- Plant Pathology Herbarium, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - A.C.Q. Brito
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - J.F. Cano-Lira
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - T. Cantillo
- Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Av. Transnordestina, S/N – Novo Horizonte, 44036-900 Feira de Santana, BA, Brazil
| | - A.D. Cavalcanti
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - R. Cheewangkoon
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand
| | - R.S. Chikowski
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - C. Conforto
- Instituto de Patología Vegetal, Instituto Nacional de Tecnología Agropecuaria, Córdoba, Argentina
| | - T.R.L. Cordeiro
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - J.D. Craine
- 5320 N. Peachtree Road, Dunwoody, GA 30338, USA
| | - R. Cruz
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - U. Damm
- Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany
| | - R.J.V. de Oliveira
- Comissão Executiva do Plano da Lavoura Cacaueira (CEPLAC)/CEPEC, Itabuna, Bahia, Brazil
| | | | - H.G. de Souza
- Recôncavo da Bahia Federal University, Bahia, Brazil
| | - J.D.W. Dearnaley
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Australia
| | - R.A. Dimitrov
- National Center of Infectious and Parasitic Diseases, 26 Yanko Sakazov blvd, Sofia 1504, Bulgaria
| | - F. Dovana
- Department of Life Sciences and Systems Biology, University of Turin, Viale P.A. Mattioli 25, 10125, Torino, Italy
| | - A. Erhard
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077, USA
| | - F. Esteve-Raventós
- Departamento de Ciencias de la Vida (Area de Botánica), Universidad de Alcalá, 28805 Alcalá de Henares, Madrid, Spain
| | - C.R. Félix
- Instituto de Ciências Biológicas e da Saúde – ICBS, Universidade Federal de Alagoas, Maceió, Brazil
| | - G. Ferisin
- Via A. Vespucci 7, 1537, 33052 Cervignano del Friuli (UD), Italy
| | - R.A. Fernandes
- Departamento de Fitopatologia, Universidade Federal de Brasilia, Brasilia, Brazil
| | - R.J. Ferreira
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - L.O. Ferro
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | | | - J.L. Frank
- Department of Biology, Southern Oregon University, Ashland OR 97520, USA
| | - K.T.L.S. Freire
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - D. García
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - J. Gené
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - A. Gêsiorska
- Department of Molecular Phylogenetics and Evolution, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, ul. Zwirki i Wigury 101, 02-089 Warsaw, Poland
| | - T.B. Gibertoni
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - R.A.G. Gondra
- University Utrecht, P.O. Box 80125, 3508 TC Utrecht, The Netherlands
| | - D.E. Gouliamova
- The Stephan Angeloff Institute of Microbiology, Bulgarian Academy of Sciences, 26 Acad. Georgi Bonchev, Sofia 1113, Bulgaria
| | - D. Gramaje
- Instituto de Ciencias de la Vid y del Vino (Gobierno de La Rioja-CSIC-Universidad de La Rioja), Ctra. LO-20, Salida 13, 26007 Logroño, La Rioja, Spain
| | | | - L.F.P. Gusmão
- Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Av. Transnordestina, S/N – Novo Horizonte, 44036-900 Feira de Santana, BA, Brazil
| | - S. Haitook
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Y. Hirooka
- Department of Clinical Plant Science, Faculty of Bioscience, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - J. Houbraken
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
| | - V. Hubka
- Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01 Prague 2, Czech Republic
- Laboratory of Fungal Genetics and Metabolism, Institute of Microbiology of the CAS, v.v.i, Vídeòská 1083, 142 20 Prague 4, Czech Republic
| | - A. Inamdar
- Department of Biotechnology and Microbiology, Vivekanand Arts, Sardar Dalipsingh Commerce and Science College, Aurangabad 431001, Maharashtra, India
| | - T. Iturriaga
- University of Illinois Urbana-Champaign, Illinois Natural History Survey, 1816 South Oak Street, Champaign, Illinois, 61820, USA
- Plant Pathology Herbarium, 334 Plant Science Building, Cornell University, Ithaca, NY 14853 USA
| | - I. Iturrieta-González
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - M. Jadan
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - N. Jiang
- The Key Laboratory for Silviculture and Conservation of Ministry of Education, Beijing Forestry University, Beijing 100083, China
| | - A. Justo
- Department of Biology, Clark University, 950 Main St, Worcester, 01610, MA, USA
| | - A.V. Kachalkin
- Lomonosov Moscow State University, Moscow, Russia
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms RAS, Pushchino, Russia
| | - V.I. Kapitonov
- Tobolsk Complex Scientific Station of the Ural Branch of the Russian Academy of Sciences, 626152 Tobolsk, Russia
| | - M. Karadelev
- Institute of Biology, Faculty of Natural Sciences and Mathematics, Ss. Cyril and Methodius University, Skopje, Republic of Macedonia
| | - J. Karakehian
- Farlow Herbarium, Harvard University, 22 Divinity Avenue, Cambridge, MA 02138, USA
| | - T. Kasuya
- Department of Biology, Keio University, 4-1-1, Hiyoshi, Kohoku-ku, Yokohama, Kanagawa 223-8521, Japan
| | - I. Kautmanová
- Slovak National Museum-Natural History Museum, vjanaskeho nab. 2, P.O. Box 13, 81006 Bratislava, Slovakia
| | - J. Kruse
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Australia
| | - I. Kušan
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - T.A. Kuznetsova
- A.N. Severtsov Institute of Ecology and Evolution RAS, Moscow, Russia
| | - M.F. Landell
- Instituto de Ciências Biológicas e da Saúde – ICBS, Universidade Federal de Alagoas, Maceió, Brazil
| | - K.-H. Larsson
- Natural History Museum, P.O. Box 1172 Blindern 0318, University of Oslo, Norway
| | - H.B. Lee
- Environmental Microbiology Lab, Division of Food Technology, Biotechnology & Agrochemistry, College of Agriculture and Life Sciences, Chonnam National University, Korea
| | - D.X. Lima
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - C.R.S. Lira
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - A.R. Machado
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - H. Madrid
- Centro de Genómica y Bioinformática, Facultad de Ciencias, Universidad Mayor, Camino La Pirámide 5750, Huechuraba, Santiago, Chile
| | - O.M.C. Magalhães
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - H. Majerova
- Faculty of Chemical and Food Technology, Biochemistry and Microbiology Department, Slovak University of Technology, Radlinského 9, 81237 Bratislava, Slovakia
| | - E.F. Malysheva
- Komarov Botanical Institute of the Russian Academy of Sciences, Saint Petersburg, Russia
| | - R.R. Mapperson
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Australia
| | | | - M.P. Martín
- Departamento de Micología, Real Jardín Botánico, RJB-CSIC, Plaza de Murillo 2, 28014 Madrid, Spain
| | - A. Martín-Sanz
- Pioneer Hi-Bred International, Inc., Campus Dupont – Pioneer, Ctra. Sevilla-Cazalla km 4.6, 41309 La Rinconada, Spain
| | - N. Matočec
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - A.R. McTaggart
- Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St Lucia 4069, Australia
| | - J.F. Mello
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - R.F.R. Melo
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - A. Mešić
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - S.J. Michereff
- Centro de Ciências Agrárias e da Biodiversidade, Universidade Federal do Cariri, Ceará, Brazil
| | - A.N. Miller
- University of Illinois Urbana-Champaign, Illinois Natural History Survey, 1816 South Oak Street, Champaign, Illinois, 61820, USA
| | - A. Minoshima
- Department of Clinical Plant Science, Faculty of Bioscience, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - L. Molinero-Ruiz
- Department of Crop Protection, Institute for Sustainable Agriculture, CSIC, 14004 Córdoba, Spain
| | - O.V. Morozova
- Komarov Botanical Institute of the Russian Academy of Sciences, Saint Petersburg, Russia
| | - D. Mosoh
- National Centre for Microbial Resource (NCMR), National Centre for Cell Science, S.P. Pune University, Ganeshkhind, Pune 411 007, Maharashtra, India
| | - M. Nabe
- 2-2-1, Sakuragaoka-nakamachi, Nishi-ku, Kobe, Hyogo 651-2226, Japan
| | - R. Naik
- National Centre for Antarctic and Ocean Research, Headland Sada, Vasco-da-Gama-403 804, Goa, India
| | - K. Nara
- Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha, Kashiwa, Chiba 277-8563, Japan
| | - S.S. Nascimento
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - R.P. Neves
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - I. Olariaga
- Biology, Geology and Inorganic Chemistry department, Universidad Rey Juan Carlos, C/ Tulipán s/n, 28933 Móstoles, Madrid, Spain
| | - R.L. Oliveira
- Programa de Pós-Graduação em Sistemática e Evolução, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Av. Senador Salgado Filho, 3000, 59072-970, Natal, RN, Brazil
| | - T.G.L. Oliveira
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - T. Ono
- Ogasawara Subtropical Branch of Tokyo Metropolitan Agriculture and Forestry Research Center, Komagari, Chichijima, Ogasawara, Tokyo, Japan
| | - M.E. Ordoñez
- Escuela de Ciencias Biológicas, Pontificia Universidad Católica del Ecuador, Av. 12 de octubre 1076 y Roca, Quito, Ecuador
| | - A. de M. Ottoni
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - L.M. Paiva
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - F. Pancorbo
- Pintores de El Paular 25, 28740 Rascafría, Madrid, Spain
| | - B. Pant
- Central Department of Botany, Tribhuvan University, Nepal
| | - J. Pawłowska
- Department of Molecular Phylogenetics and Evolution, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, ul. Zwirki i Wigury 101, 02-089 Warsaw, Poland
| | - S.W. Peterson
- Mycotoxin Prevention and Applied Microbiology Research Unit, Agricultural Research Service, U.S. Department of Agriculture, 1815 North University Street, Peoria, IL 61604, USA
| | - D.B. Raudabaugh
- University of Illinois Urbana-Champaign, Illinois Natural History Survey, 1816 South Oak Street, Champaign, Illinois, 61820, USA
| | - E. Rodríguez-Andrade
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - E. Rubio
- C/ José Cueto 3 – 5ºB, 33401 Avilés, Asturias, Spain
| | - K. Rusevska
- Institute of Biology, Faculty of Natural Sciences and Mathematics, Ss. Cyril and Methodius University, Skopje, Republic of Macedonia
| | - A.L.C.M.A. Santiago
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - A.C.S. Santos
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - C. Santos
- Departamento de Ciencias Químicas y Recursos Naturales, BIOREN-UFRO, Universidad de La Frontera, Temuco, Chile
| | - N.A. Sazanova
- Institute of Biological Problems of the North, Far East Branch of the Russian Academy of Sciences, Magadan, Russia
| | - S. Shah
- Central Department of Botany, Tribhuvan University, Nepal
| | - J. Sharma
- Department of Plant and Soil Science, Texas Tech. University, USA
| | - B.D.B. Silva
- Universidade Federal da Bahia, Instituto de Biologia, Departamento de Botânica, 40170115 Ondina, Salvador, BA, Brazil
| | - J.L. Siquier
- Carrer Major, 19, E-07300 Inca (Islas Baleares), Spain
| | - M.S. Sonawane
- National Centre for Microbial Resource (NCMR), National Centre for Cell Science, S.P. Pune University, Ganeshkhind, Pune 411 007, Maharashtra, India
| | - A.M. Stchigel
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, 43201 Reus, Tarragona, Spain
| | - T. Svetasheva
- Biology and Technologies of Living Systems Department, Tula State Lev Tolstoy Pedagogical University, 125 Lenin av., 300026 Tula, Russia
| | - N. Tamakeaw
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand
| | - M.T. Telleria
- Departamento de Micología, Real Jardín Botánico, RJB-CSIC, Plaza de Murillo 2, 28014 Madrid, Spain
| | - P.V. Tiago
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil
| | - C.M. Tian
- The Key Laboratory for Silviculture and Conservation of Ministry of Education, Beijing Forestry University, Beijing 100083, China
| | - Z. Tkalčec
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - M.A. Tomashevskaya
- All-Russian Collection of Microorganisms, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms RAS, Pushchino, Russia
| | - H.H. Truong
- Department of Clinical Plant Science, Faculty of Bioscience, Hosei University, 3-7-2 Kajino-cho, Koganei, Tokyo, Japan
| | - M.V. Vecherskii
- A.N. Severtsov Institute of Ecology and Evolution RAS, Moscow, Russia
| | - C.M. Visagie
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
- Biosystematics Division, Agricultural Research Council – Plant Health and Protection, P. Bag X134, Queenswood, Pretoria 0121, South Africa
| | - A. Vizzini
- Department of Life Sciences and Systems Biology, University of Turin, Viale P.A. Mattioli 25, 10125, Torino, Italy
| | - N. Yilmaz
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
| | - I.V. Zmitrovich
- Komarov Botanical Institute of the Russian Academy of Sciences, Saint Petersburg, Russia
| | | | - T. Boekhout
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
- Institute of Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands
| | - T. Kehlet
- Natural History Museum of Denmark, Department of Biology, University of Copenhagen, Universitetsparken 15, 2100 Copenhagen E, Denmark
| | - T. Læssøe
- Natural History Museum of Denmark, Department of Biology, University of Copenhagen, Universitetsparken 15, 2100 Copenhagen E, Denmark
| | - J.Z. Groenewald
- Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
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Abstract
People with rare diseases have a very high rate of mental and social stress. This results in specific tasks and problems in the psychosomatic care of patients. On the one hand, the physical and/or psychological symptoms of an undetected rare organic disease can be misdiagnosed as a psychosomatic disease, and the affected persons possibly receive psychotherapy that is not causally effective. On the other hand, mental diseases that require treatment can arise as a result of the effects of a rare disease. These should be diagnosed as such and treated with psychotherapy. If, in individual cases, both symptoms of a rare disease and symptoms of a psychosomatic disorder in the sense of comorbidity are present, neither one nor the other diagnosis should lead to a hasty termination of diagnostic efforts. Otherwise, misalignments can easily occur and the further diagnostic and therapeutic process can be permanently disturbed. Interdisciplinary team care interventions should therefore be developed further.
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Affiliation(s)
- B Kolb-Niemann
- Klinik für Psychosomatische Medizin und Psychotherapie, Universitätsklinikum Gießen und Marburg, Standort Marburg, Baldingerstr. 1, 35043, Marburg, Deutschland.
| | - J Kruse
- Klinik für Psychosomatische Medizin und Psychotherapie, Universitätsklinikum Gießen und Marburg, Standort Marburg, Baldingerstr. 1, 35043, Marburg, Deutschland
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21
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Zimmer D, Kruse J, Siebers N, Panten K, Oelschläger C, Warkentin M, Hu Y, Zuin L, Leinweber P. Bone char vs. S-enriched bone char: Multi-method characterization of bone chars and their transformation in soil. Sci Total Environ 2018; 643:145-156. [PMID: 29936158 DOI: 10.1016/j.scitotenv.2018.06.076] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2018] [Revised: 06/06/2018] [Accepted: 06/07/2018] [Indexed: 06/08/2023]
Abstract
To decrease environmental impacts from usage of mineral P fertilizers based on rock phosphate, alternative P fertilizers are urgently necessary but have to be critically evaluated for their characteristics and behaviour or effects in soil. For this reason, bone char (BC) and S-enriched BC (BCplus), original and after one vegetation period in soil, were analysed by wet chemical analyses and XANES spectroscopy. According to X-ray absorption near edge structure (XANES) spectroscopy, both chars were dominated by P bound in hydroxyapatite, which was well reflected by wet chemical P fractionation, where Ca-P was the dominant fraction. Sulfur fractionation of both chars confirmed low percentages of sulfate-S according to XANES analysis but failed to detect elemental S in BCplus. Because S concentrations in BCplus were comparable to that of activated carbon used for biogas desulfurization and sorbed S was dominantly elemental S, BC seems to be well suited for biogas desulfurization. After one year in soil the disappearance of more easily soluble Ca(H2PO4)·2H2O and strongly reduced proportions of sulfates and sulfonates in soil-BCplus compared to BCplus pointed to considerable advantages of BCplus over BC. Taking into consideration the acidic pH of BCplus, the high Ca, P, and S concentrations and the expected microbial induced "in situ digestion" of BC by oxidation of elemental S, it can be concluded that a cascade usage of BC as biogas adsorber and following subsequent usage of BCplus as S/P/Ca/Mg (multi-element) fertilizer could be an alternative to mineral fertilizers based on rock phosphate. The agronomic efficiency and detailed application guidelines must be derived from established and currently running longer-term plot and field experiments.
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Affiliation(s)
- Dana Zimmer
- University of Rostock, Soil Science, Justus-von-Liebig-Weg 6, D-18051 Rostock, Germany
| | - Jens Kruse
- Soil Science, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, 53115 Bonn, Germany
| | - Nina Siebers
- Forschungszentrum Jülich GmbH, Agrosphere (IBG-3) Institute of Bio- and Geosciences, Wilhelm Johnen Straße, D-52425 Jülich, Germany; Forschungszentrum Jülich GmbH, Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons, Wilhelm Johnen Straße, D-52425 Jülich, Germany
| | - Kerstin Panten
- Julius Kühn Institute, Institute for Crop and Soil Science, Bundesallee 69, D-38116 Braunschweig, Germany
| | - Claudia Oelschläger
- University of Rostock, Department of Material Science & Medical Engineering, Friedrich-Barnewitz-Straße, D-18119 Rostock, Germany
| | - Mareike Warkentin
- University of Rostock, Department of Material Science & Medical Engineering, Friedrich-Barnewitz-Straße, D-18119 Rostock, Germany
| | - Yongfeng Hu
- Canadian Light Source Saskatoon Inc., 44 Innovation Boulevard Saskatoon, S7N 2V3, Saskatchewan, Canada
| | - Lucia Zuin
- Canadian Light Source Saskatoon Inc., 44 Innovation Boulevard Saskatoon, S7N 2V3, Saskatchewan, Canada
| | - Peter Leinweber
- University of Rostock, Soil Science, Justus-von-Liebig-Weg 6, D-18051 Rostock, Germany.
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Braun G, Sebesvari Z, Braun M, Kruse J, Amelung W, An NT, Renaud FG. Does sea-dyke construction affect the spatial distribution of pesticides in agricultural soils? - A case study from the Red River Delta, Vietnam. Environ Pollut 2018; 243:890-899. [PMID: 30245451 DOI: 10.1016/j.envpol.2018.09.050] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2018] [Revised: 08/13/2018] [Accepted: 09/07/2018] [Indexed: 06/08/2023]
Abstract
The Red River Delta is a major agricultural production area of Vietnam with year-round use of pesticides for paddy rice cultivation and other production systems. The delta is protected from flooding, storm surges and saline water intrusion by a sophisticated river and sea-dyke system. Little is known about the effects of such a dyke system on pesticide pollution in the enclosed landscape. Our aim was to address this gap by i) determining pesticide prevalence in soils and sediments within a dyked agricultural area, and by ii) assessing whether and to which degree this dyke system might affect the spatial distribution of pesticides. After sampling paddy rice fields (topsoil) and irrigation ditches (sediment) perpendicular to the dyke in Giao Thuy district, we analysed 12 of the most commonly used pesticides in this area. In soils, we detected most frequently isoprothiolane (100% detection frequency), chlorpyrifos (85%) and propiconazole (41%) while in sediments isoprothiolane (71%) and propiconazole (71%) were most frequently found. Maximum concentrations reached 42.6 μg isoprotiolane kg-1 in soil, and 35.1 μg azoxystrobin kg-1 in sediment. Our results supported the assumption that the dyke system influenced residue distribution of selected pesticides. More polar substances increasingly accumulated in fields closer to the sea-dyke (R2 = 0.92 for chlorpyrifos and 0.51 for isoprothiolane). We can thus support initiatives from local authorities to use the distance to dykes as a mean for deliniating zones of different environmental pollution; yet, the degree at which dykes influence pesticide accumulation appear to be compound specific.
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Affiliation(s)
- G Braun
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, 53113, Bonn, Germany.
| | - Z Sebesvari
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, 53113, Bonn, Germany
| | - M Braun
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115, Bonn, Germany
| | - J Kruse
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115, Bonn, Germany; Institute for Bio- and Geosciences - IBG-3, Agrosphere, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany
| | - W Amelung
- Institute of Crop Science and Resource Conservation (INRES), Soil Science and Soil Ecology, University Bonn, Nussallee 13, 53115, Bonn, Germany
| | - N T An
- Faculty of Environment, Vietnam National University of Agriculture, Gia Lâm, Hanoi, Viet Nam
| | - F G Renaud
- Institute for Environment and Human Security (UNU-EHS), United Nations University, Platz der Vereinten Nationen 1, 53113, Bonn, Germany
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Atasoy S, Johar H, Fang XY, Kruse J, Ladwig KH. Cumulative effect of depressed mood and obesity on type II diabetes incidence: Findings from the MONICA/KORA cohort study. J Psychosom Res 2018; 115:66-70. [PMID: 30470320 DOI: 10.1016/j.jpsychores.2018.10.007] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Revised: 10/16/2018] [Accepted: 10/16/2018] [Indexed: 01/17/2023]
Abstract
BACKGROUND Obesity and depression both individually contribute to the risk of Type II Diabetes (T2DM). The extent to which obesity can be set-off by depression is unknown. METHODS In a sample of 9340 participants followed for 15.4 years (79,372 person-years) from the prospective MONICA/KORA population-based cohort conducted in Southern Germany, we investigated the impact of obesity, defined as Body Mass Index (BMI) ≥ 30, and depression on the incidence of T2DM using Cox Proportional Hazards Regression. RESULTS The relative risk of T2DM was over 6 fold higher among obese participants in comparison to normal weight participants (HR 6.05; 95% CI 4.82 to 7.59; p < .0001). Nonetheless, among participants with obesity, comorbidity of depression was associated with an additional 2 fold risk T2DM (HR 8.05, 95% CI 5.90-10.98; p < .0001). This finding corresponded to an increase in the 15.4-year absolute risk of T2DM from 15.9 cases per 1000 person-years (py) in participants with obesity but not depression, to 21.4 cases per 1000 py for participants with obesity and depression. Further analysis of joint effects and Relative Excess Risk due to Interaction disclosed that depressed mood is associated with significantly higher risk of T2DM in participants with obesity, and to a lesser extent in overweight participants, however an association was not found in normal weight participants. CONCLUSIONS The present investigation discloses that despite the overreaching importance of obesity as a risk factor for T2DM, there is room for depressed mood to add measurable risk prediction.
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Affiliation(s)
- S Atasoy
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany; Institute of Medical Informatics, Biometry and Epidemiology (IBE), München, Germany
| | - H Johar
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany; German Center for Diabetes Research (DZD), München-Neuherberg, Germany; Department of Psychosomatic Medicine and Psychotherapy, University of Gießen and Marburg, Germany
| | - X Y Fang
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany; Department of Psychosomatic Medicine and Psychotherapy, Klinikum rechts der Isar, Technische Universität München, München, Germany
| | - J Kruse
- German Center for Diabetes Research (DZD), München-Neuherberg, Germany; Department of Psychosomatic Medicine and Psychotherapy, University of Gießen and Marburg, Germany
| | - K H Ladwig
- Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany; German Center for Diabetes Research (DZD), München-Neuherberg, Germany; Department of Psychosomatic Medicine and Psychotherapy, Klinikum rechts der Isar, Technische Universität München, München, Germany.
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24
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Kruse J, Kruse J, Yip APW, Cary Reid M, E.Löckenhoff C. PAIN FORECASTING AND RECOLLECTION IN MIDDLE-AGED AND OLDER ADULTS WITH CHRONIC PAIN. Innov Aging 2018. [DOI: 10.1093/geroni/igy023.3037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- J Kruse
- Cornell University, Ithaca, New York, United States
| | - J Kruse
- Cornell University, Ithaca, NY, USA
| | | | - M Cary Reid
- Weill Cornell Medical College, New York, NY, USA
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25
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Yip A, Kruse J, Cary Reid M, Löckenhoff CE. AFFECTIVE GOALS AND CHRONIC PAIN MANAGEMENT: COMPARING ACTUAL, IDEAL, AND AVOIDED AFFECT. Innov Aging 2018. [DOI: 10.1093/geroni/igy023.3036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- A Yip
- Cornell University, Ithaca, New York, United States
| | - J Kruse
- Cornell University, Ithaca, NY, USA
| | - M Cary Reid
- Weill Cornell Medical College, New York, NY, USA
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26
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Hohmann S, Deisher AJ, Suzuki A, Konishi H, Rettmann ME, Lehmann HI, Kruse J, Parker KD, Newman LK, Herman MG, Packer DL. P298Safety of catheter-free VT ablation: Dose-dependent LVEF changes after proton beam therapy of the LV in a porcine model. Eur Heart J 2018. [DOI: 10.1093/eurheartj/ehy564.p298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- S Hohmann
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
| | - A J Deisher
- Mayo Clinic, Department of Radiation Oncology, Rochester, United States of America
| | - A Suzuki
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
| | - H Konishi
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
| | - M E Rettmann
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
| | - H I Lehmann
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
| | - J Kruse
- Mayo Clinic, Department of Radiation Oncology, Rochester, United States of America
| | - K D Parker
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
| | - L K Newman
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
| | - M G Herman
- Mayo Clinic, Department of Radiation Oncology, Rochester, United States of America
| | - D L Packer
- Mayo Clinic, Division of Cardiovascular Diseases, Rochester, United States of America
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Kislitsina ON, Michel E, Bonow RO, Thomas JD, Liu M, Kruse J, Andrei AC, McCarthy PM. P3522Preoperative characteristics and late outcomes in patients who develop left ventricular dysfunction following mitral valve surgery for degenerative mitral regurgitation (DMR). Eur Heart J 2018. [DOI: 10.1093/eurheartj/ehy563.p3522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- O N Kislitsina
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
| | - E Michel
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
| | - R O Bonow
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
| | - J D Thomas
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
| | - M Liu
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
| | - J Kruse
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
| | - A C Andrei
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
| | - P M McCarthy
- Northwestern University, Cardiac Surgery and Cardiology, Chicago, United States of America
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28
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Connor A, Greig T, Kruse J. Evolutionary generation of game levels. EAI Endorsed Transactions on Creative Technologies 2018. [DOI: 10.4108/eai.10-4-2018.155857] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
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29
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Peddapatla RVG, Ahmed MR, Blackshields CA, Sousa-Gallagher MJ, McSweeney S, Kruse J, Crean AM, Fitzpatrick D. Broadband Acoustic Resonance Dissolution Spectroscopy (BARDS): A Novel Approach To Investigate the Wettability of Pharmaceutical Powder Blends. Mol Pharm 2017; 15:31-39. [PMID: 28926716 DOI: 10.1021/acs.molpharmaceut.7b00658] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The ability of broadband acoustic resonance dissolution spectroscopy (BARDS) to assess the wettability of powder blends is investigated. BARDS is a novel analytical technology developed on the basis of the change in acoustic phenomena observed when material is added into a solvent under resonance. Addition of solid material to the solvent results in the introduction of gas (air) into the solvent, changing the compressibility of the solvent system, and reducing the velocity of sound in the solvent. As a material is wetted and dissolved, the gas is released from the solvent and resonance frequency is altered. The main purpose of this work is to demonstrate the ability of BARDS to assess differences in the wetting behavior of tablet excipients (microcrystalline cellulose (MCC) and magnesium stearate (MgSt)) and a model drug (metoclopramide hydrochloride) as single component powders and multicomponent powder blends. BARDS acoustic responses showed a prolonged release of gas for the powdered blends with lubricant compared to unlubricated blends. As the elimination of gas from the solvent was assumed to follow first order elimination kinetics, a compressible gas elimination rate constant was calculated from the log plots of the gas volume profiles. The gas elimination rate constant was used as a parameter to compare the release of gas from the powder introduced to the solvent and hence the powder wetting behavior. A lower gas elimination rate constant was measured for lubricated blends compared to nonlubricated blends, suggesting the prolonged hydration of lubricated blends. Standard wetting techniques such as contact angle measurements and wetting time analysis were also used to analyze the blends and confirmed differences in wetting behavior determined by BARDS. The study results demonstrate the capability of BARDS as a rapid, analytical tool to determine the wetting behavior of the pharmaceutical powder blends and the potential of BARDS as a process analytical technology (PAT) tool.
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Affiliation(s)
- Raghu V G Peddapatla
- Pharmaceutical Manufacturing Technology Centre, School of Pharmacy, University College Cork , Cork, T12 YN60, Ireland
| | - M Rizwan Ahmed
- Department of Chemistry, Analytical and Biological Chemistry Research Facility (ABCRF), University College Cork , Cork, T12 YN60, Ireland
| | - Caroline A Blackshields
- Pharmaceutical Manufacturing Technology Centre, School of Pharmacy, University College Cork , Cork, T12 YN60, Ireland
| | - M J Sousa-Gallagher
- Process & Chemical Engineering, School of Engineering, University College Cork , Cork, T12 YN60, Ireland
| | - Sean McSweeney
- Department of Chemistry, Analytical and Biological Chemistry Research Facility (ABCRF), University College Cork , Cork, T12 YN60, Ireland
| | - J Kruse
- Kinetox , 9413 BB, Beilen, Netherlands
| | - Abina M Crean
- Pharmaceutical Manufacturing Technology Centre, School of Pharmacy, University College Cork , Cork, T12 YN60, Ireland.,Synthesis and Solid State Pharmaceutical Centre, School of Pharmacy, University College Cork , Cork, T12 YN60, Ireland
| | - Dara Fitzpatrick
- Department of Chemistry, Analytical and Biological Chemistry Research Facility (ABCRF), University College Cork , Cork, T12 YN60, Ireland
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30
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Kruse J, Gao P, Eibelmeier M, Alfarraj S, Rennenberg H. Dynamics of amino acid redistribution in the carnivorous Venus flytrap (Dionaea muscipula) after digestion of 13 C/ 15 N-labelled prey. Plant Biol (Stuttg) 2017; 19:886-895. [PMID: 28727249 DOI: 10.1111/plb.12603] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2017] [Accepted: 07/17/2017] [Indexed: 06/07/2023]
Abstract
Amino acids represent an important component in the diet of the Venus flytrap (Dionaea muscipula), and supply plants with much needed nitrogen resources upon capture of insect prey. Little is known about the significance of prey-derived carbon backbones of amino acids for the success of Dionaea's carnivorous life-style. The present study aimed at characterizing the metabolic fate of 15 N and 13 C in amino acids acquired from double-labeled insect powder. We tracked changes in plant amino acid pools and their δ13 C- and δ15 N-signatures over a period of five weeks after feeding, as affected by contrasting feeding intensity and tissue type (i.e., fed and non-fed traps and attached petioles of Dionaea). Isotope signatures (i.e., δ13 C and δ15 N) of plant amino acid pools were strongly correlated, explaining 60% of observed variation. Residual variation was related to contrasting effects of tissue type, feeding intensity and elapsed time since feeding. Synthesis of nitrogen-rich transport compounds (i.e., amides) during peak time of prey digestion increased 15 N- relative to 13 C- abundances in amino acid pools. After completion of prey digestion, 13 C in amino acid pools was progressively exchanged for newly fixed 12 C. The latter process was most evident for non-fed traps and attached petioles of plants that had received ample insect powder. We argue that prey-derived amino acids contribute to respiratory energy gain and loss of 13 CO2 during conversion into transport compounds (i.e., 2 days after feeding), and that amino-nitrogen helps boost photosynthetic carbon gain later on (i.e., 5 weeks after feeding).
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Affiliation(s)
- J Kruse
- Institut für Forstbotanik und Baumphysiologie, Professur für Baumphysiologie, Universität Freiburg, Freiburg, Germany
| | - P Gao
- Institut für Forstbotanik und Baumphysiologie, Professur für Baumphysiologie, Universität Freiburg, Freiburg, Germany
| | - M Eibelmeier
- Institut für Forstbotanik und Baumphysiologie, Professur für Baumphysiologie, Universität Freiburg, Freiburg, Germany
| | - S Alfarraj
- College of Sciences, King Saud University, Riyadh, Saudi Arabia
| | - H Rennenberg
- Institut für Forstbotanik und Baumphysiologie, Professur für Baumphysiologie, Universität Freiburg, Freiburg, Germany
- College of Sciences, King Saud University, Riyadh, Saudi Arabia
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Johar H, Bidlingmeier M, Koenig W, Thorand B, Kruse J, Ladwig KH. The impact of inflammation-mediated stress reactivity in type 2 diabetes patients. Findings from the population-based KORA age study. DIABETOL STOFFWECHS 2017. [DOI: 10.1055/s-0037-1601627] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- H Johar
- Helmholtz Zentrum München, Institute of Epidemiology II, Neuherberg, Germany
| | - M Bidlingmeier
- Klinikum der Ludwig-Maximilians-Universität München, Medizinische Klinik und Poliklinik IV, München, Germany
| | - W Koenig
- Deutsches Herzzentrum München, Klinik für Herz- & Kreislauferkrankungen, München, Germany
| | - B Thorand
- Helmholtz Zentrum München, Institute of Epidemiology II, Neuherberg, Germany
| | - J Kruse
- University of Gießen and Marburg, Department of Psychosomatic Medicine and Psychotherapy, Gießen, Germany
| | - KH Ladwig
- Helmholtz Zentrum München, Institute of Epidemiology II, Neuherberg, Germany
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Lukaschek K, Baumert J, Kruse J, Meisinger C, Ladwig KH. Sex differences in the association of social network satisfaction and the risk for type 2 diabetes. BMC Public Health 2017; 17:379. [PMID: 28464880 PMCID: PMC5414370 DOI: 10.1186/s12889-017-4323-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2016] [Accepted: 04/27/2017] [Indexed: 11/15/2022] Open
Abstract
Background The role of an individual’s social network satisfaction (SNS) in the association of social isolation or living alone and incident type 2 diabetes (T2D) is unclear. We assessed the association of SNS with incident T2D and analysed potential modifications of the SNS-T2D association by social isolation or living alone. Methods The study population (N = 6839 aged 25–74 years without diabetes at baseline) derived from the prospective population-based MONICA/KORA study (1989–2009). Social network satisfaction was assessed by a single item. Cox regression was used to estimate hazard ratios (HR) for SNS separately in men and women. Results In men with low SNS, risk for incident T2D increased significantly (HR: 2.15, 95% CI: 1.33–3.48, p value 0.002). After additional adjustments for social isolation or living alone, the risk for incident T2D was still significant, albeit less pronounced (HRs 1.85 or 2.05, p values 0.001 or 0.004). The interaction analysis showed an increased T2D risk effect for low SNS compared to high SNS in women living in a partnership (HR: 2.11, 95% CI: 1.00–4.44, p value for interaction: 0.047) and for moderate SNS compared to high SNS in socially connected women (1.56, 1.01–2.39, 0.010). Conclusions Further research is needed to address the complexities of the perception of social relationships and social interactions, or interdependence, especially when another major public health issue such as T2D is concerned. Electronic supplementary material The online version of this article (doi:10.1186/s12889-017-4323-7) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- K Lukaschek
- Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Epidemiology II, Mental Health Research Unit, Ingolstaedter Landstr. 1, 85764, Neuherberg, Germany.,German Center for Diabetes Research (DZD), Munich, Germany.,Department of Psychosomatic Medicine and Psychotherapy, University of Gießen, Gießen, Germany
| | - J Baumert
- Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Epidemiology II, Mental Health Research Unit, Ingolstaedter Landstr. 1, 85764, Neuherberg, Germany.,German Center for Diabetes Research (DZD), Munich, Germany
| | - J Kruse
- German Center for Diabetes Research (DZD), Munich, Germany.,Department of Psychosomatic Medicine and Psychotherapy, University of Gießen, Gießen, Germany.,Department of Psychosomatic Medicine and Psychotherapy, University of Marburg, Marburg, Germany
| | - C Meisinger
- Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Epidemiology II, Mental Health Research Unit, Ingolstaedter Landstr. 1, 85764, Neuherberg, Germany.,MONICA/KORA Myocardial Infarction Registry, Central Hospital of Augsburg, Augsburg, Germany
| | - K H Ladwig
- Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Epidemiology II, Mental Health Research Unit, Ingolstaedter Landstr. 1, 85764, Neuherberg, Germany. .,German Center for Diabetes Research (DZD), Munich, Germany. .,Department of Psychosomatic Medicine and Psychotherapy, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
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Vogel T, Kruse J, Siebers N, Nelles M, Eichler-Löbermann B. Recycled Products from Municipal Wastewater: Composition and Effects on Phosphorus Mobility in a Sandy Soil. J Environ Qual 2017; 46:443-451. [PMID: 28380553 DOI: 10.2134/jeq2016.10.0392] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Recycled products from wastewater may contain high concentrations of phosphorus (P) and are thus promising alternative fertilizers. However, to better predict their P fertilizer efficiency and potential for P leaching, investigations on P forms and P mobility in soil are essential. In this study, different recycled products-an untreated sewage sludge ash (SSA), an HSO-digested SSA, four thermochemically treated SSAs (two Mg-SSAs and two Ca-SSAs), and struvite-were investigated using a combination of wet chemical methods and P K-edge X-ray absorption near-edge structure (XANES) spectroscopy concerning their composition and their effects on P sorption in a sandy soil in comparison to triple superphosphate. Most of the P in the SSAs was associated with Ca in stable P fractions. The lowest P values in labile fractions (HO-P, NaHCO-P) were found for the untreated SSA and struvite. However, the addition of struvite resulted in an immediate increase in the bioavailable P fractions and the degree of P saturation in soil after only 1 d of incubation. This suggests a high P fertilizer potential for struvite but also a risk of P losses. Among the SSAs, the two Mg-SSAs increased the bioavailable P fractions in soil the most, whereas the lowest values were measured after application of the untreated SSA. Our results demonstrate that chemical analyses of recycled P products may involve the risk of misjudging the fertilizer quality when performed alone, without considering the behavior of these products in soil.
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Steinert C, Bumke PJ, Hollekamp RL, Larisch A, Leichsenring F, Mattheß H, Sek S, Sodemann U, Stingl M, Ret T, Vojtová H, Wöller W, Kruse J. Resource activation for treating post-traumatic stress disorder, co-morbid symptoms and impaired functioning: a randomized controlled trial in Cambodia. Psychol Med 2017; 47:553-564. [PMID: 27804900 DOI: 10.1017/s0033291716002592] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
BACKGROUND Mental health morbidity in post-conflict settings is high. Nevertheless, randomized controlled trials of psychotherapy on site are rare. Our aim was to integrate rigorous research procedures into a humanitarian programme and test the efficacy of resource activation (ROTATE) in treating post-traumatic stress disorder (PTSD), co-morbid symptoms and impaired functioning in Cambodia. METHOD A total of 86 out-patients with PTSD were randomly assigned to five sessions of ROTATE (n = 53) or a 5-week waiting-list control (WLC) condition (n = 33). Treatment was provided by six Cambodian psychologists who had received extensive training in ROTATE. Masked assessments were made before and after therapy. RESULTS PTSD remission rates according to the DSM-IV algorithm of the Harvard Trauma Questionnaire were 95.9% in ROTATE and 24.1% in the WLC condition. Thus, patients receiving ROTATE had a significantly higher likelihood of PTSD remission (odds ratio 0.012, 95% confidence interval 0.002-0.071, p < 0.00001). Additionally, levels of anxiety, depression and impaired functioning were significantly reduced compared with the WLC condition (p < 0.00001, between-group effect sizes d = 2.41, 2.26 and 2.54, respectively). No harms were reported. CONCLUSIONS ROTATE was efficacious in treating Cambodian patients with high symptom levels of PTSD, emotional distress and impaired functioning. ROTATE is a brief, culturally adaptable intervention focusing on stabilization and strengthening resources rather than trauma confrontation. It can be taught to local professionals and paraprofessionals and enhance access to mental health care for patients in need.
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Affiliation(s)
- C Steinert
- University of Giessen,Clinic for Psychosomatic Medicine and Psychotherapy,Ludwigstrasse 76,Giessen,Germany
| | - P J Bumke
- Trauma Aid Germany,Schillerstrasse 6,Berlin,Germany
| | - R L Hollekamp
- University of Giessen,Clinic for Psychosomatic Medicine and Psychotherapy,Ludwigstrasse 76,Giessen,Germany
| | - A Larisch
- University of Giessen,Clinic for Psychosomatic Medicine and Psychotherapy,Friedrichstrasse 33,Giessen,Germany
| | - F Leichsenring
- University of Giessen,Clinic for Psychosomatic Medicine and Psychotherapy,Ludwigstrasse 76,Giessen,Germany
| | - H Mattheß
- Psychotraumatology Institute Europe,Großenbaumer Allee 35a,Duisburg,Germany
| | - S Sek
- Department of Psychology,The Royal University of Phnom Penh,Russian Federation Boulevard,Toul Kork,Phnom Penh,Cambodia
| | - U Sodemann
- Trauma Aid Germany,In den Floragärten 41,Berlin,Germany
| | - M Stingl
- University of Giessen,Clinic for Psychosomatic Medicine and Psychotherapy,Ludwigstrasse 76,Giessen,Germany
| | - T Ret
- Department of Psychology,The Royal University of Phnom Penh,Russian Federation Boulevard,Toul Kork,Phnom Penh,Cambodia
| | - H Vojtová
- Slovak Institute for Psychotraumatology and EMDR,Legionarska 29, Trencin,Slovakia
| | - W Wöller
- Rhein-Klinik, Hospital for Psychsomatic Medicine and Psychotherapy,Luisenstrasse 3, Bad Honnef,Germany
| | - J Kruse
- University of Giessen,Clinic for Psychosomatic Medicine and Psychotherapy,Friedrichstrasse 33,Giessen,Germany
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Kruse J, Lehto N, Riklund K, Tegner Y, Engström Å. Scrutinized with inadequate control and support: Interns' experiences communicating with and writing referrals to hospital radiology departments – A qualitative study. Radiography (Lond) 2016. [DOI: 10.1016/j.radi.2016.04.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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Kulzer B, Albus C, Herpertz S, Kruse J, Lange K, Lederbogen F, Petrak F. Psychosoziales und Diabetes. DIABETOL STOFFWECHS 2016. [DOI: 10.1055/s-0042-113783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- B. Kulzer
- Diabetes-Zentrum Bad Mergentheim, Forschungsinstitut der Diabetes Akademie (FIDAM), Mergentheim
| | - C. Albus
- Klinik und Poliklinik für Psychosomatik und Psychotherapie, Universität Köln
| | - S. Herpertz
- Klinik für Psychosomatische Medizin und Psychotherapie, LWL-Universitätsklinikum der Ruhr-Universität Bochum
| | - J. Kruse
- Klinik für Psychosomatik und Psychotherapie der Justus-Liebig-Universität Gießen und Philipps-Universität Marburg
| | - K. Lange
- Forschungs- und Lehreinheit Medizinische Psychologie, Medizinische Hochschule, Hannover
| | | | - F. Petrak
- Klinik für Psychosomatische Medizin und Psychotherapie, LWL-Universitätsklinikum der Ruhr-Universität Bochum
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Schaeffer A, Amelung W, Hollert H, Kaestner M, Kandeler E, Kruse J, Miltner A, Ottermanns R, Pagel H, Peth S, Poll C, Rambold G, Schloter M, Schulz S, Streck T, Roß-Nickoll M. The impact of chemical pollution on the resilience of soils under multiple stresses: A conceptual framework for future research. Sci Total Environ 2016; 568:1076-1085. [PMID: 27372890 DOI: 10.1016/j.scitotenv.2016.06.161] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2016] [Revised: 06/20/2016] [Accepted: 06/20/2016] [Indexed: 06/06/2023]
Abstract
Soils are faced with man-made chemical stress factors, such as the input of organic or metal-containing pesticides, in combination with non-chemical stressors like soil compaction and natural disturbance like drought. Although multiple stress factors are typically co-occurring in soil ecosystems, research in soil sciences on this aspect is limited and focuses mostly on single structural or functional endpoints. A mechanistic understanding of the reaction of soils to multiple stressors is currently lacking. Based on a review of resilience theory, we introduce a new concept for research on the ability of polluted soil (xenobiotics or other chemical pollutants as one stressor) to resist further natural or anthropogenic stress and to retain its functions and structure. There is strong indication that pollution as a primary stressor will change the system reaction of soil, i.e., its resilience, stability and resistance. It can be expected that pollution affects the physiological adaption of organisms and the functional redundancy of the soil to further stress. We hypothesize that the recovery of organisms and chemical-physical properties after impact of a follow-up stressor is faster in polluted soil than in non-polluted soil, i.e., polluted soil has a higher dynamical stability (dynamical stability=1/recovery time), whereas resilience of the contaminated soil is lower compared to that of not or less contaminated soil. Thus, a polluted soil might be more prone to change into another system regime after occurrence of further stress. We highlight this issue by compiling the literature exemplarily for the effects of Cu contamination and compaction on soil functions and structure. We propose to intensify research on effects of combined stresses involving a multidisciplinary team of experts and provide suggestions for corresponding experiments. Our concept offers thus a framework for system level analysis of soils paving the way to enhance ecological theory.
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Affiliation(s)
- Andreas Schaeffer
- RWTH Aachen University, Institute for Environmental Research (Biology 5), 52074 Aachen, Germany.
| | - Wulf Amelung
- Soil Science and Soil Ecology, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Henner Hollert
- RWTH Aachen University, Institute for Environmental Research (Biology 5), 52074 Aachen, Germany
| | - Matthias Kaestner
- Helmholtz-Centre for Environmental Research - UFZ, Department of Environmental Biotechnology, 04318 Leipzig, Germany
| | - Ellen Kandeler
- Soil Science and Land Evaluation, University of Hohenheim, Emil Wolff Str. 27, 70599 Stuttgart, Germany
| | - Jens Kruse
- Soil Science and Soil Ecology, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Anja Miltner
- Helmholtz-Centre for Environmental Research - UFZ, Department of Environmental Biotechnology, 04318 Leipzig, Germany
| | - Richard Ottermanns
- RWTH Aachen University, Institute for Environmental Research (Biology 5), 52074 Aachen, Germany
| | - Holger Pagel
- Soil Science and Land Evaluation, University of Hohenheim, Emil Wolff Str. 27, 70599 Stuttgart, Germany
| | - Stephan Peth
- Department of Soil Science, University of Kassel, Nordbahnhofstr. 1a, 37213 Witzenhausen, Germany
| | - Christian Poll
- Soil Science and Land Evaluation, University of Hohenheim, Emil Wolff Str. 27, 70599 Stuttgart, Germany
| | - Gerhard Rambold
- Systematic Botany and Mycology, University of Bayreuth, Universitätsstraße 30, 95447 Bayreuth, Germany
| | - Michael Schloter
- Helmholtz Zentrum München, Research Unit for Environmental Genomics, Ingolstädter Landstr. 1, 85758 Oberschleissheim, Germany
| | - Stefanie Schulz
- Helmholtz Zentrum München, Research Unit for Environmental Genomics, Ingolstädter Landstr. 1, 85758 Oberschleissheim, Germany
| | - Thilo Streck
- Soil Science and Land Evaluation, University of Hohenheim, Emil Wolff Str. 27, 70599 Stuttgart, Germany
| | - Martina Roß-Nickoll
- RWTH Aachen University, Institute for Environmental Research (Biology 5), 52074 Aachen, Germany
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Kruse J. MO-A-201-01: A Cliff's Notes Version of Proton Therapy. Med Phys 2016. [DOI: 10.1118/1.4957148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Mundy D, Tryggestad E, Beltran C, Furutani K, Gilson G, Ito S, Johnson J, Kruse J, Remmes N, Tasson A, Whitaker T, Herman M. SU-F-T-169: A Periodic Quality Assurance Program for a Spot-Scanning Proton Treatment Facility. Med Phys 2016. [DOI: 10.1118/1.4956306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Altevers J, Lukaschek K, Baumert J, Kruse J, Meisinger C, Emeny RT, Ladwig KH. Poor structural social support is associated with an increased risk of Type 2 diabetes mellitus: findings from the MONICA/KORA Augsburg cohort study. Diabet Med 2016; 33:47-54. [PMID: 26331457 DOI: 10.1111/dme.12951] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 08/28/2015] [Indexed: 12/31/2022]
Abstract
AIMS Several psychosocial factors have been shown to increase the risk of Type 2 diabetes mellitus. This study investigated the association between structural social support and incidence of Type 2 diabetes mellitus in men and women. METHODS Data were derived from three population-based MONICA/KORA surveys conducted in 1984-1995 in the Augsburg region (southern Germany) and followed up by 2009. The study population comprised 8952 participants (4669 men/4283 women) aged 30-74 years without diabetes at baseline. Structural social support was assessed using the Social Network Index. Sex-specific hazard ratios were estimated from Cox proportional hazard models. RESULTS Within follow-up, 904 incident Type 2 diabetes mellitus cases (558 men, 346 women) were observed. Crude incidence rates for Type 2 diabetes mellitus per 10 000 person-years were substantially higher in poor compared with good structural social support (men: 94 vs. 69, women: 58 vs. 43). After adjustment for age, survey, parental history of diabetes, smoking status, alcohol intake, physical activity, hypertension, dyslipidaemia, BMI, education, sleep complaints and depressed mood, risk of Type 2 diabetes mellitus for participants with poor compared with good structural social support was 1.31 [95% confidence interval (CI) = 1.11-1.55] in men and 1.10 (95% CI = 0.88-1.37) in women. Stratified analyses revealed a hazard ratio of 1.50 (95% CI = 1.23-1.83) in men with a low level of education and 0.87 (95% CI = 0.62-1.22) in men with a high level of education (P for interaction: 0.0082). CONCLUSIONS Poor structural social support is associated with Type 2 diabetes mellitus in men. This association is independent of risk factors at baseline and is particularly pronounced in men with a low level of education.
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Affiliation(s)
- J Altevers
- Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - K Lukaschek
- Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - J Baumert
- Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- German Center for Diabetes Research (DZD), partner site Munich, Germany
| | - J Kruse
- German Center for Diabetes Research (DZD), partner site Munich, Germany
- Department of Psychosomatic Medicine and Psychotherapy, University of Giessen, Augsburg, Germany
- Department of Psychosomatic Medicine and Psychotherapy, University of Marburg, Augsburg, Germany
| | - C Meisinger
- Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- Central Hospital of Augsburg, MONICA/KORA Myocardial Infarction Registry, Augsburg, Germany
| | - R T Emeny
- Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - K H Ladwig
- Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- German Center for Diabetes Research (DZD), partner site Munich, Germany
- Department of Psychosomatic Medicine and Psychotherapy, Klinikum rechts der Isar, Technische Universität München, Munich, Germany
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Kulzer B, Albus C, Herpertz S, Kruse J, Lange K, Lederbogen F, Petrak F. Psychosoziales und Diabetes. DIABETOL STOFFWECHS 2015. [DOI: 10.1055/s-0035-1553881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- B. Kulzer
- Diabetes-Zentrum Bad Mergentheim, Forschungsinstitut der Diabetes Akademie, Mergentheim
| | - C. Albus
- Klinik und Poliklinik für Psychosomatik und Psychotherapie, Universität Köln
| | - S. Herpertz
- Klinik für Psychosomatische Medizin und Psychotherapie, LWL-Universitätsklinikum der Ruhr-Universität Bochum
| | - J. Kruse
- Klinik für Psychosomatik und Psychotherapie der Justus-Liebig-Universität Gießen und Philipps-Universität Marburg
| | - K. Lange
- Forschungs- und Lehreinheit Medizinische Psychologie, Medizinische Hochschule, Hannover
| | | | - F. Petrak
- Klinik für Psychosomatische Medizin und Psychotherapie, LWL-Universitätsklinikum der Ruhr-Universität Bochum
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Kruse J, Connor AM. Multi-agent evolutionary systems for the generation of complex virtual worlds. EAI Endorsed Transactions on Creative Technologies 2015. [DOI: 10.4108/eai.20-10-2015.150099] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
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Coulthart MB, Jansen GH, Connolly T, D’Amour R, Kruse J, Lynch J, Sabourin S, Wang Z, Giulivi A, Ricketts MN, Cashman NR. Creutzfeldt-Jakob disease mortality in Canada, 1998 to 2013. Can Commun Dis Rep 2015; 41:182-191. [PMID: 29769950 PMCID: PMC5864311 DOI: 10.14745/ccdr.v41i08a01] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
BACKGROUND Human prion diseases, known collectively as Creutzfeldt-Jakob disease (CJD), are fatal, infectious neurodegenerative disorders that occur in all human populations. OBJECTIVE To summarize national surveillance data for CJD in Canada between January 1, 1998, and December 31, 2013. METHODS Detailed investigations were conducted of individual suspected CJD cases, with collaboration between Canadian health professionals and investigators affiliated with a central CJD surveillance registry operated by the Public Health Agency of Canada. Data were collected on the clinical profile, family history, and results of paraclinical and laboratory investigations, including post-mortem neuropathological examination. RESULTS A total of 662 deaths from definite and probable CJD were identified in Canadian residents during the study period, comprising 613 cases of sporadic CJD (92.6%), 43 cases of genetic prion disease (6.5%), 4 cases of iatrogenic CJD (0.6%), and 2 cases of variant CJD disease (0.3%). The overall crude mortality rate for sporadic CJD was 1.18 per million per year [95% confidence interval (CI): 1.08,1.27]. Age-specific rates ranged from 0.05 [95% CI: 0.03,0.08] in persons under 50 years of age to 7.11 [95% CI: 6.20,8.11] in those aged 70 to 79. A significant net upward trend in age-adjusted rates was observed over the study period. Standardized mortality ratios, calculated for 10 individual Canadian provinces with reference to national average mortality rates, did not differ significantly from 1.0. CONCLUSION Creutzfeldt-Jakob disease remains rare in Canada, although mortality rates vary by two orders of magnitude between older and younger age groups. The upward trend in age-standardized sporadic CJD mortality rate over the study period can be better accounted for by gradually improving case ascertainment than by a real increase in incidence.
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Affiliation(s)
- MB Coulthart
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
| | - GH Jansen
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
- The Ottawa Hospital, University of Ottawa and Eastern Ontario Regional Laboratory Association, Ottawa, ON
| | - T Connolly
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
| | - R D’Amour
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
| | - J Kruse
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
| | - J Lynch
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
| | - S Sabourin
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
| | - Z Wang
- Canadian Creutzfeldt-Jakob Disease Surveillance System, Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Ottawa, ON
- Deceased November 2014
| | - A Giulivi
- The Ottawa Hospital, University of Ottawa and Eastern Ontario Regional Laboratory Association, Ottawa, ON
| | | | - NR Cashman
- Department of Medicine (Neurology), Brain Research Centre, University of British Columbia, Vancouver, BC
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Remmes N, Mundy D, Stoker J, Classic K, Nelson K, Beltran C, Bues M, Kruse J, Herman M. SU-E-T-400: Evaluation of Shielding and Activation at Two Pencil Beam Scanning Proton Facilities. Med Phys 2015. [DOI: 10.1118/1.4924761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Deisher A, Anderson S, Cusma J, Herman M, Johnson S, Lehmann H, Packer D, Parker K, Song L, Takami M, Kruse J. WE-EF-BRA-03: Catheter- Free Ablation with External Photon Radiation: Treatment Planning, Delivery Considerations, and Correlation of Effects with Delivered Dose. Med Phys 2015. [DOI: 10.1118/1.4925982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Kruse J, Abraham M, Amelung W, Baum C, Bol R, Kühn O, Lewandowski H, Niederberger J, Oelmann Y, Rüger C, Santner J, Siebers M, Siebers N, Spohn M, Vestergren J, Vogts A, Leinweber P. Innovative methods in soil phosphorus research: A review. J Plant Nutr Soil Sci (1999) 2015; 178:43-88. [PMID: 26167132 PMCID: PMC4497464 DOI: 10.1002/jpln.201400327] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 10/16/2014] [Indexed: 05/18/2023]
Abstract
Phosphorus (P) is an indispensable element for all life on Earth and, during the past decade, concerns about the future of its global supply have stimulated much research on soil P and method development. This review provides an overview of advanced state-of-the-art methods currently used in soil P research. These involve bulk and spatially resolved spectroscopic and spectrometric P speciation methods (1 and 2D NMR, IR, Raman, Q-TOF MS/MS, high resolution-MS, NanoSIMS, XRF, XPS, (µ)XAS) as well as methods for assessing soil P reactions (sorption isotherms, quantum-chemical modeling, microbial biomass P, enzymes activity, DGT, 33P isotopic exchange, 18O isotope ratios). Required experimental set-ups and the potentials and limitations of individual methods present a guide for the selection of most suitable methods or combinations.
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Affiliation(s)
- Jens Kruse
- Soil Science, Faculty for Agricultural and Environmental Sciences, University of RostockJustus-von-Liebig Weg 6, 18051 Rostock, Germany
- Institute of Crop Science and Resource Conservation, Soil Science and Soil Ecology, University of BonnNussallee 13, 53115 Bonn, Germany
| | - Marion Abraham
- Leibniz Institute for Baltic Sea ResearchSeestraße 15, 18119 Rostock, Germany
| | - Wulf Amelung
- Institute of Crop Science and Resource Conservation, Soil Science and Soil Ecology, University of BonnNussallee 13, 53115 Bonn, Germany
- Forschungszentrum Jülich GmbH, Institute of Bio- and GeosciencesIBG-3: Agrosphere, 52425 Jülich, Germany
| | - Christel Baum
- Soil Science, Faculty for Agricultural and Environmental Sciences, University of RostockJustus-von-Liebig Weg 6, 18051 Rostock, Germany
| | - Roland Bol
- Forschungszentrum Jülich GmbH, Institute of Bio- and GeosciencesIBG-3: Agrosphere, 52425 Jülich, Germany
| | - Oliver Kühn
- Institute of Physics, Faculty of Mathematics and Natural Sciences, University of RostockWismarsche Straße 43–45,18057 Rostock, Germany
| | - Hans Lewandowski
- Forschungszentrum Jülich GmbH, Institute of Bio- and GeosciencesIBG-3: Agrosphere, 52425 Jülich, Germany
| | - Jörg Niederberger
- Chair of Silviculture, Albert Ludwig University FreiburgTennenbacherstraße 4, 79085 Freiburg im Breisgau, Germany
| | - Yvonne Oelmann
- Geoecology, Geosciences, University of TübingenRümelinstraße 19–23.72070 Tübingen, Germany
| | - Christopher Rüger
- Analytical Chemistry, Faculty of Mathematics and Natural Sciences, University of RostockDr.-Lorenzweg 1, 18059 Rostock, Germany
| | - Jakob Santner
- Institute of Soil Research, University of Natural Resources and Life Sciences ViennaKonrad Lorenz-Straße 24, 3430 Tulln an der Donau, Austria
| | - Meike Siebers
- Institute of Molecular Physiology and Biotechnology of Plants, University of BonnKarlrobert-Kreiten-Str. 13, 53115 Bonn, Germany
| | - Nina Siebers
- Forschungszentrum Jülich GmbH, Institute of Bio- and GeosciencesIBG-3: Agrosphere, 52425 Jülich, Germany
| | - Marie Spohn
- Department of Soil Ecology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University BayreuthDr.-Hans-Frisch-Str. 1–3, 95448 Bayreuth, Germany
| | - Johan Vestergren
- Chemistry, Umeå University, Kemi A, plan 4, Linnaeus väg10 Umeå, Sweden
| | - Angela Vogts
- Leibniz Institute for Baltic Sea ResearchSeestraße 15, 18119 Rostock, Germany
| | - Peter Leinweber
- Soil Science, Faculty for Agricultural and Environmental Sciences, University of RostockJustus-von-Liebig Weg 6, 18051 Rostock, Germany
- *
Soil Science, Faculty for Agricultural and Environmental Sciences, University of Rostock, Justus-von-Liebig Weg 6, 18051 Rostock, Germany e-mail:
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Timlin C, Warren DR, Rowland B, Madkhali A, Loken J, Partridge M, Jones B, Kruse J, Miller R. 3D calculation of radiation-induced second cancer risk including dose and tissue response heterogeneities. Med Phys 2015; 42:866-76. [PMID: 25652499 DOI: 10.1118/1.4905158] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2014] [Revised: 12/05/2014] [Accepted: 12/08/2014] [Indexed: 02/11/2024] Open
Abstract
PURPOSE Tools for comparing relative induced second cancer risk, to inform choice of radiotherapy treatment plan, are becoming increasingly necessary as the availability of new treatment modalities expands. Uncertainties, in both radiobiological models and model parameters, limit the confidence of such calculations. The aim of this study was to develop and demonstrate a software tool to produce a malignant induction probability (MIP) calculation which incorporates patient-specific dose and allows for the varying responses of different tissue types to radiation. METHODS The tool has been used to calculate relative MIPs for four different treatment plans targeting a subtotally resected meningioma: 3D conformal radiotherapy (3DCFRT), volumetric modulated arc therapy (VMAT), intensity-modulated x-ray therapy (IMRT), and scanned protons. RESULTS Two plausible MIP models, with considerably different dose-response relationships, were considered. A fractionated linear-quadratic induction and cell-kill model gave a mean relative cancer risk (normalized to 3DCFRT) of 113% for VMAT, 16% for protons, and 52% for IMRT. For a linear no-threshold model, these figures were 105%, 42%, and 78%, respectively. The relative MIP between plans was shown to be significantly more robust to radiobiological parameter uncertainties compared to absolute MIP. Both models resulted in the same ranking of modalities, in terms of MIP, for this clinical case. CONCLUSIONS The results demonstrate that relative MIP is a useful metric with which treatment plans can be ranked, regardless of parameter- and model-based uncertainties. With further validation, this metric could be used to discriminate between plans that are equivalent with respect to other planning priorities.
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Affiliation(s)
- C Timlin
- Particle Therapy Cancer Research Institute, University of Oxford, Oxfordshire OX1 3RH, United Kingdom and Department of Physics, University of Oxford, Oxfordshire OX1 3RH, United Kingdom
| | - D R Warren
- Particle Therapy Cancer Research Institute, University of Oxford, Oxfordshire OX1 3RH, United Kingdom and Department of Physics, University of Oxford, Oxfordshire OX1 3RH, United Kingdom
| | - B Rowland
- Particle Therapy Cancer Research Institute, University of Oxford, Oxfordshire OX1 3RH, United Kingdom and Department of Physics, University of Oxford, Oxfordshire OX1 3RH, United Kingdom
| | - A Madkhali
- Particle Therapy Cancer Research Institute, University of Oxford, Oxfordshire OX1 3RH, United Kingdom and Department of Physics, University of Oxford, Oxfordshire OX1 3RH, United Kingdom
| | - J Loken
- Particle Therapy Cancer Research Institute, University of Oxford, Oxfordshire OX1 3RH, United Kingdom and Department of Physics, University of Oxford, Oxfordshire OX1 3RH, United Kingdom
| | - M Partridge
- CRUK/MRC Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford OX3 7DQ, United Kingdom
| | - B Jones
- CRUK/MRC Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford OX3 7DQ, United Kingdom
| | - J Kruse
- Mayo Clinic, Rochester, Minnesota 55905
| | - R Miller
- Mayo Clinic, Rochester, Minnesota 55905
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Kulzer B, Albus C, Herpertz S, Kruse J, Lange K, Lederbogen F, Petrak F. Psychosoziales und Diabetes. DIABETOL STOFFWECHS 2015. [DOI: 10.1055/s-0034-1385403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- B. Kulzer
- Diabetes-Zentrum Bad Mergentheim, Forschungsinstitut der Diabetes Akademie, Mergentheim
| | - C. Albus
- Klinik und Poliklinik für Psychosomatik und Psychotherapie, Universität Köln
| | - S. Herpertz
- Klinik für Psychosomatische Medizin und Psychotherapie, LWL-Universitätsklinikum der Ruhr-Universität Bochum
| | - J. Kruse
- Klinik für Psychosomatik und Psychotherapie der Justus-Liebig-Universität Gießen und Philipps-Universität Marburg
| | - K. Lange
- Forschungs- und Lehreinheit Medizinische Psychologie, Medizinische Hochschule, Hannover
| | | | - F. Petrak
- Klinik für Psychosomatische Medizin und Psychotherapie, LWL-Universitätsklinikum der Ruhr-Universität Bochum
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Deisher A, Whitaker T, Kooy H, Trofimov A, Kruse J. SU-E-T-441: Comparison of Dose Distributions for Spot-Scanned Pencil-Beam and Scattered-Beam Proton Treatments of Ocular Tumors. Med Phys 2014. [DOI: 10.1118/1.4888774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Remmes N, Courneyea L, Corner S, Beltran C, Stoker J, Kemp B, Kruse J, Herman M. WE-F-16A-02: Design, Fabrication, and Validation of a 3D-Printed Proton Filter for Range Spreading. Med Phys 2014. [DOI: 10.1118/1.4889469] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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