One sixth of Amazonian tree diversity is dependent on river floodplains

Amazonia's floodplain system is the largest and most biodiverse on Earth. Although forests are crucial to the ecological integrity of floodplains, our understanding of their species composition and how this may differ from surrounding forest types is still far too limited, particularly as changing inundation regimes begin to reshape floodplain tree communities and the critical ecosystem functions they underpin. Here we address this gap by taking a spatially explicit look at Amazonia-wide patterns of tree-species turnover and ecological specialization of the region's floodplain forests. We show that the majority of Amazonian tree species can inhabit floodplains, and about a sixth of Amazonian tree diversity is ecologically specialized on floodplains. The degree of specialization in floodplain communities is driven by regional flood patterns, with the most compositionally differentiated floodplain forests located centrally within the fluvial network and contingent on the most extraordinary flood magnitudes regionally. Our results provide a spatially explicit view of ecological specialization of floodplain forest communities and expose the need for whole-basin hydrological integrity to protect the Amazon's tree diversity and its function.

Evaluation of the management potential of timber resources in clearwater floodplain forests in the Amazon using growth models

The Amazonian clearwater igapós are poorly studied floodplain ecosystems that are mainly covered by forests and are undergoing massive threats due to changes in land use and climate. Their hydrochemical characteristics and edaphic conditions fall between those of the eutrophic várzea floodplains on whitewater rivers and those of the oligotrophic igapós on blackwater rivers. Previous studies have indicated the management potential of timber species in the highly dynamic várzea floodplains due to the fast tree growth and high forest productivity. Timber resource management, however, is not recommended for the blackwater ecosystem because of its slow dynamics and high vulnerability to disturbances. For clearwater igapós, information on the potential for sustainable management of timber resources is lacking. In this study, we modeled the growth in diameter, height, and volume to derive species-specific minimum logging diameters (MLD) and felling cycles (FC) for eight merchantable species in the clearwater igapós of the Branco and Tapajós rivers in the northern and southern Amazon Basin, respectively. Diameter growth was modeled by analyzing the tree rings that are annually formed in the Amazonian floodplains as a consequence of the regular and predicable long-term flooding. Growth modeling followed the guidelines of the Growth-Oriented Logging (GOL) concept, with the adjustment of diameter growth improved by applying nonlinear mixed-effects regression. MLDs varied from 36 to 90 cm and FCs ranged from 6 to 21 years, which diverges from the standards of Brazilian logging regulations (MLD: 50 cm; FC: 25-35 years). This indicates the potential for timber resource management, which should be tested and introduced at small scales, integrated in protected areas to stepwise promote the sustainable management of these natural resources by traditional communities to increase their income and the conservation of this ecosystem.

Consistent patterns of common species across tropical tree communities

Trees structure the Earth's most biodiverse ecosystem, tropical forests. The vast number of tree species presents a formidable challenge to understanding these forests, including their response to environmental change, as very little is known about most tropical tree species. A focus on the common species may circumvent this challenge. Here we investigate abundance patterns of common tree species using inventory data on 1,003,805 trees with trunk diameters of at least 10 cm across 1,568 locations1-6 in closed-canopy, structurally intact old-growth tropical forests in Africa, Amazonia and Southeast Asia. We estimate that 2.2%, 2.2% and 2.3% of species comprise 50% of the tropical trees in these regions, respectively. Extrapolating across all closed-canopy tropical forests, we estimate that just 1,053 species comprise half of Earth's 800 billion tropical trees with trunk diameters of at least 10 cm. Despite differing biogeographic, climatic and anthropogenic histories7, we find notably consistent patterns of common species and species abundance distributions across the continents. This suggests that fundamental mechanisms of tree community assembly may apply to all tropical forests. Resampling analyses show that the most common species are likely to belong to a manageable list of known species, enabling targeted efforts to understand their ecology. Although they do not detract from the importance of rare species, our results open new opportunities to understand the world's most diverse forests, including modelling their response to environmental change, by focusing on the common species that constitute the majority of their trees.

Mapping density, diversity and species-richness of the Amazon tree flora

Using 2.046 botanically-inventoried tree plots across the largest tropical forest on Earth, we mapped tree species-diversity and tree species-richness at 0.1-degree resolution, and investigated drivers for diversity and richness. Using only location, stratified by forest type, as predictor, our spatial model, to the best of our knowledge, provides the most accurate map of tree diversity in Amazonia to date, explaining approximately 70% of the tree diversity and species-richness. Large soil-forest combinations determine a significant percentage of the variation in tree species-richness and tree alpha-diversity in Amazonian forest-plots. We suggest that the size and fragmentation of these systems drive their large-scale diversity patterns and hence local diversity. A model not using location but cumulative water deficit, tree density, and temperature seasonality explains 47% of the tree species-richness in the terra-firme forest in Amazonia. Over large areas across Amazonia, residuals of this relationship are small and poorly spatially structured, suggesting that much of the residual variation may be local. The Guyana Shield area has consistently negative residuals, showing that this area has lower tree species-richness than expected by our models. We provide extensive plot meta-data, including tree density, tree alpha-diversity and tree species-richness results and gridded maps at 0.1-degree resolution.

More than 10,000 pre-Columbian earthworks are still hidden throughout Amazonia

Indigenous societies are known to have occupied the Amazon basin for more than 12,000 years, but the scale of their influence on Amazonian forests remains uncertain. We report the discovery, using LIDAR (light detection and ranging) information from across the basin, of 24 previously undetected pre-Columbian earthworks beneath the forest canopy. Modeled distribution and abundance of large-scale archaeological sites across Amazonia suggest that between 10,272 and 23,648 sites remain to be discovered and that most will be found in the southwest. We also identified 53 domesticated tree species significantly associated with earthwork occurrence probability, likely suggesting past management practices. Closed-canopy forests across Amazonia are likely to contain thousands of undiscovered archaeological sites around which pre-Columbian societies actively modified forests, a discovery that opens opportunities for better understanding the magnitude of ancient human influence on Amazonia and its current state.

Seasonal shifts in isoprenoid emission composition from three hyperdominant tree species in central Amazonia

Volatile isoprenoids regulate plant performance and atmospheric processes, and Amazon forests comprise the dominant source to the global atmosphere. Still, there is a poor understanding of how isoprenoid emission capacities vary in response to ecophysiological and environmental controls in Amazonian ecosystems. We measured isoprenoid emission capacities of three Amazonian hyperdominant tree species - Protium hebetatum, Eschweilera grandiflora, Eschweilera coriacea - across seasons and along a topographic and edaphic environmental gradient in the central Amazon. From wet to dry season, both photosynthesis and isoprene emission capacities strongly declined, while emissions increased among the heavier isoprenoids: monoterpenes and sesquiterpenes. Plasticity across habitats was most evident in P. hebetatum, which emitted sesquiterpenes only in the dry season, at rates that significantly increased along the hydro-topographic gradient from white sands (shallow root water access) to uplands (deep water table). We suggest that emission composition shifts are part of a plastic response to increasing abiotic stress (e.g. heat and drought) and reduced photosynthetic supply of substrates for isoprenoid synthesis. Our comprehensive measurements suggest that more emphasis should be placed on other isoprenoids, besides isoprene, in the context of abiotic stress responses. Shifting emission compositions have implications for atmospheric responses because of the strong variation in reactivity among isoprenoid compounds.

NEOTROPICAL FRESHWATER FISHES: A dataset of occurrence and abundance of freshwater fishes in the Neotropics

The Neotropical region hosts 4225 freshwater fish species, ranking first among the world's most diverse regions for freshwater fishes. Our NEOTROPICAL FRESHWATER FISHES data set is the first to produce a large-scale Neotropical freshwater fish inventory, covering the entire Neotropical region from Mexico and the Caribbean in the north to the southern limits in Argentina, Paraguay, Chile, and Uruguay. We compiled 185,787 distribution records, with unique georeferenced coordinates, for the 4225 species, represented by occurrence and abundance data. The number of species for the most numerous orders are as follows: Characiformes (1289), Siluriformes (1384), Cichliformes (354), Cyprinodontiformes (245), and Gymnotiformes (135). The most recorded species was the characid Astyanax fasciatus (4696 records). We registered 116,802 distribution records for native species, compared to 1802 distribution records for nonnative species. The main aim of the NEOTROPICAL FRESHWATER FISHES data set was to make these occurrence and abundance data accessible for international researchers to develop ecological and macroecological studies, from local to regional scales, with focal fish species, families, or orders. We anticipate that the NEOTROPICAL FRESHWATER FISHES data set will be valuable for studies on a wide range of ecological processes, such as trophic cascades, fishery pressure, the effects of habitat loss and fragmentation, and the impacts of species invasion and climate change. There are no copyright restrictions on the data, and please cite this data paper when using the data in publications.

The vascular epiphyte flora in a white-sand ecosystem of the Uatumã Sustainable Development Reserve, Central Amazon

Amazon ecosystems have suffered constant losses due to fragmentation processes, which as a result puts associated biodiversity at risk. Although vascular epiphytes constitute a representative component of tropical forests, they are still poorly studied in white-sand ecosystems. We present a description and checklist of the vascular epiphytes present in white-sand ecosystems (campinaranas) in the Central Amazon. We also analyzed the structure and determined of the value of epiphytic importance (VEI) for the species. We recorded 112 species, 58 genera, and 16 families of vascular epiphytes. The greatest richness (95 spp.) was observed in forested phytophysiognomies. Orchidaceae (66 spp.), Bromeliaceae (12 spp.), and Araceae (9 spp.) were the richest families. Prosthechea aemula W.E.Higgins (Orchidaceae) had the highest VEI and accounted for about 28% of an abundance of individuals. Among the species, 36.6% have a distribution restricted to the Amazon region, which emphasizes the importance of the conservation of these environments.

The specialized white-sand flora of the Uatumã Sustainable Development Reserve, central Amazon, Brazil

The consensus is that Amazonian white-sand ecosystems (campinaranas) shelter several endemic plant species. However, recent studies have shown that most species are generalists, and they also occur in other Neotropical ecosystems. To investigate this issue, we analyzed the proportion of endemic/specialist species in a checklist of trees, palms, and shrubs sampled between 2014 and 2020 in campinarana patches of the Uatumã Sustainable Development Reserve (USDR), central Amazon. We also provide a description of phytophysiognomies, habitats, distribution, and phenology. We found 167 species belonging to 117 genera and 50 families. Fabaceae was the most representative (21 spp.), followed by Rubiaceae (16 spp.) and Chrysobalanaceae (10 spp.). We found that 30.5% of the species were exclusive to campinaranas, confirming that although there are many endemics, proportionally most species are generalists. The USDR has a rich flora specialized in oligotrophic habitats, which must be considered in the management and conservation strategies of these complex and fragile Amazonian ecosystems. 

Morphology, germination, and geographic distribution of Pentaclethra macroloba (Fabaceae): a hyperdominant Amazonian tree

Introduction: Pentaclethra macroloba is a hyperdominant tree in the Amazon estuary of great socioeconomic importance for the region because the oil from its seeds is a powerful herbal medicine. Objective: We aimed to characterize the morphological structure, the morphological adaptations in response to the daily flooding of the Amazon estuary and the biogeographic area of P. macroloba. Methods: Detailed description of the external morphology, from germination to the adult tree, was obtained from individuals located in floodplain forest, Northeast Amazonia. The occupation area and the geographical extension of P. macroloba were determined from point of geographical coordinates of botanical samples deposited in the digital collections of Mobot and SpeciesLink. Results: Adult individuals have adapted structures in response to daily flooding, such as: adventitious roots to increase respiratory efficiency and lenticels in the trunk, serving as a connection point for oxygen transport between the root and the aerial part. Dried fruit favours the activation of the explosive dehiscence mechanism, allowing the seed to be expelled long distance. Deltoid shape of the seed allows water fluctuation and more efficient dispersal. Seedling is phanerocotylar hypogeal and with one pair of reserve cotyledons that provide the seedling an extra source of energy to escape the flood. Germination rate was 78 % and the speed was 0.2 seeds.day-1. Circular buffer method revealed the presence of 123 subpopulations of P. macroloba distributed in a radius of 5 699 943 km² across the Neotropical region. Conclusions: Much of the morphological structures of P. macroloba are adaptive and evolutionary responses to the periodically flooded environment of the Amazon estuary, showing that these environments select the trees, best adapted, to inhabit the flood. P. macroloba has a wide geographical area denotes the plasticity of adapting to different environments, which may justify its monodominance in some regions.

Convergent evolution of tree hydraulic traits in Amazonian habitats: implications for community assemblage and vulnerability to drought

Amazonian droughts are increasing in frequency and severity. However, little is known about how this may influence species-specific vulnerability to drought across different ecosystem types. We measured 16 functional traits for 16 congeneric species from six families and eight genera restricted to floodplain, swamp, white-sand or plateau forests of Central Amazonia. We investigated whether habitat distributions can be explained by species hydraulic strategies, and if habitat specialists differ in their vulnerability to embolism that would make water transport difficult during drought periods. We found strong functional differences among species. Nonflooded species had higher wood specific gravity and lower stomatal density, whereas flooded species had wider vessels, and higher leaf and xylem hydraulic conductivity. The P₅₀ values (water potential at 50% loss of hydraulic conductivity) of nonflooded species were significantly more negative than flooded species. However, we found no differences in hydraulic safety margin among species, suggesting that all trees may be equally likely to experience hydraulic failure during severe droughts. Water availability imposes a strong selection leading to differentiation of plant hydraulic strategies among species and may underlie patterns of adaptive radiation in many tropical tree genera. Our results have important implications for modeling species distribution and resilience under future climate scenarios.

Biased-corrected richness estimates for the Amazonian tree flora

Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended database of forest plots with up-to-date taxonomy. We show that the species abundance distribution of Amazonia is best approximated by a logseries with aggregated individuals, where aggregation increases with rarity. By averaging several methods to estimate total richness, we confirm that over 15,000 tree species are expected to occur in Amazonia. We also show that using ten times the number of plots would result in an increase to just ~50% of those 15,000 estimated species. To get a more complete sample of all tree species, rigorous field campaigns may be needed but the number of trees in Amazonia will remain an estimate for years to come.

Rarity of monodominance in hyperdiverse Amazonian forests

Tropical forests are known for their high diversity. Yet, forest patches do occur in the tropics where a single tree species is dominant. Such “monodominant” forests are known from all of the main tropical regions. For Amazonia, we sampled the occurrence of monodominance in a massive, basin-wide database of forest-inventory plots from the Amazon Tree Diversity Network (ATDN). Utilizing a simple defining metric of at least half of the trees ≥ 10 cm diameter belonging to one species, we found only a few occurrences of monodominance in Amazonia, and the phenomenon was not significantly linked to previously hypothesized life history traits such wood density, seed mass, ectomycorrhizal associations, or Rhizobium nodulation. In our analysis, coppicing (the formation of sprouts at the base of the tree or on roots) was the only trait significantly linked to monodominance. While at specific locales coppicing or ectomycorrhizal associations may confer a considerable advantage to a tree species and lead to its monodominance, very few species have these traits. Mining of the ATDN dataset suggests that monodominance is quite rare in Amazonia, and may be linked primarily to edaphic factors.

Massive tree mortality from flood pulse disturbances in Amazonian floodplain forests: The collateral effects of hydropower production

Large dams built for hydroelectric power generation alter the hydrology of rivers, attenuating the flood pulse downstream of the dam and impacting riparian and floodplain ecosystems. The present work mapped black-water floodplain forests (igapó) downstream of the Balbina Reservoir, which was created between 1983 and 1987 by damming the Uatumã River in the Central Amazon basin. We apply remote sensing methods to detect tree mortality resulting from hydrological changes, based on analysis of 56 ALOS/PALSAR synthetic aperture radar images acquired at different flood levels between 2006 and 2011. Our application of object-based image analysis (OBIA) methods and the random forests supervised classification algorithm yielded an overall accuracy of 87.2%. A total of 9800 km² of igapó forests were mapped along the entire river downstream of the dam, but forest mortality was only observed below the first 49 km downstream, after the Morena rapids, along an 80-km river stretch. In total, 12% of the floodplain forest died within this stretch. We also detected that 29% of the remaining living igapó forest may be presently undergoing mortality. Furthermore, this large loss does not include the entirety of lost igapó forests downstream of the dam; areas which are now above current maximum flooding heights are no longer floodable and do not show on our mapping but will likely transition over time to upland forest species composition and dynamics, also characteristic of igapó loss. Our results show that floodplain forests are extremely sensitive to long-term downstream hydrological changes and disturbances resulting from the disruption of the natural flood pulse. Brazilian hydropower regulations should require that Amazon dam operations ensure the simulation of the natural flood-pulse, despite losses in energy production, to preserve the integrity of floodplain forest ecosystems and to mitigate impacts for the riverine populations.

Flood tolerance in two tree species that inhabit both the Amazonian floodplain and the dry Cerrado savanna of Brazil

Comparing plants of the same species thriving in flooded and non-flooded ecosystems helps to clarify the interplay between natural selection, phenotypic plasticity and stress adaptation. We focussed on responses of seeds and seedlings of Genipa americana and Guazuma ulmifolia to substrate waterlogging or total submergence. Both species are commonly found in floodplain forests of Central Amazonia and in seasonally dry savannas of Central Brazil (Cerrado). Although seeds of Amazonian and Cerrado G. americana were similar in size, the germination percentage of Cerrado seeds was decreased by submergence (3 cm water) and increased in Amazonian seeds. The seeds of Amazonian G. ulmifolia were heavier than Cerrado seeds, but germination of both types was unaffected by submergence. Three-month-old Amazonian and Cerrado seedlings of both species survived 30 days of waterlogging or submersion despite suffering significant inhibition in biomass especially if submerged. Shoot elongation was also arrested. Submersion triggered chlorosis and leaf abscission in Amazonian and Cerrado G. ulmifolia while waterlogging did so only in Cerrado seedlings. During 30 days of re-exposure to non-flooded conditions, G. ulmifolia plants that lost their leaves produced a replacement flush. However, they attained only half the plant dry mass of non-flooded plants. Both submerged and waterlogged G. americana retained their leaves. Consequently, plant dry mass after 30 days recovery was less depressed by these stresses than in G. ulmifolia. Small amounts of cortical aerenchyma were found in roots 2 cm from the tip of well-drained plants. The amount was increased by flooding. Waterlogging but not submergence promoted hypertrophy of lenticels at the stem base of both species and adventitious rooting in G. ulmifolia. Despite some loss of performance in dryland plants, flood tolerance traits were present in wetland and dryland populations of both species. They are part of an overall stress-response potential that permits flexible acclimation to locally flooded conditions.

Postponing the production of ant domatia as a strategy promoting an escape from flooding in an Amazonian myrmecophyte

Background and Aims

Even when adapted to flooding environments, the spatial distribution, growing strategies and anti-herbivore defences of plants face stressful conditions. Here we describe the effects of flooding on carbon allocation on growth, domatia and leaf production, and the herbivory on the myrmecophyte domatia-bearing Tococa coronata Benth. (Melastomataceae) growing along river banks in the Amazon region.

Methods

In an area of 80 000 m2 of riparian forest along the Juruena River we actively searched for individuals of T. coronata. In each plant we evaluated the size of the plant when producing the first domatium and determined its best predictor: (1) plant total height; (2) size of plants above flood level; or (3) length of time each plant spent underwater. We also compared the herbivory, internode elongation, foliar asymmetry and specific leaf weight between T. coronata individuals growing above and below the maximum flooding level. The distance to the river and the height of the first domatium produced were compared between T. coronata and its sympatric congener, T. bulifera.

Key Results

We found that T. coronata invests in rapid growth in the early ontogenetic stages through an elongation of internodes rather than in constitutive anti-herbivore defences to leaves or domatia to exceed the maximum flooding level. Consequently, its leaf herbivory was higher when compared with those produced above the flooding level. Individuals with leaves above flood levels produce coriaceous leaves and ant-domatias. Thus, flooding seems to trigger changes in growth strategies of the species. Furthermore, T. coronata occurs within the flood level, whereas its congener T. bullifera invariably occurs at sites unreachable by floods.

Conclusion

Even in conditions of high stress, T. coronata presents both physiological and adaptive strategies that allow for colonization and establishment within flooded regions. These mechanisms involve an extreme trade-off of postponing adult plant characteristics to rapid growth to escape flooding while minimizing carbon allocation to defence.

Species Distribution Modelling: Contrasting presence-only models with plot abundance data

Species distribution models (SDMs) are widely used in ecology and conservation. Presence-only SDMs such as MaxEnt frequently use natural history collections (NHCs) as occurrence data, given their huge numbers and accessibility. NHCs are often spatially biased which may generate inaccuracies in SDMs. Here, we test how the distribution of NHCs and MaxEnt predictions relates to a spatial abundance model, based on a large plot dataset for Amazonian tree species, using inverse distance weighting (IDW). We also propose a new pipeline to deal with inconsistencies in NHCs and to limit the area of occupancy of the species. We found a significant but weak positive relationship between the distribution of NHCs and IDW for 66% of the species. The relationship between SDMs and IDW was also significant but weakly positive for 95% of the species, and sensitivity for both analyses was high. Furthermore, the pipeline removed half of the NHCs records. Presence-only SDM applications should consider this limitation, especially for large biodiversity assessments projects, when they are automatically generated without subsequent checking. Our pipeline provides a conservative estimate of a species’ area of occupancy, within an area slightly larger than its extent of occurrence, compatible to e.g. IUCN red list assessments.

Effects of increasing temperature and, CO2 on quality of litter, shredders, and microorganisms in Amazonian aquatic systems

Climate change may affect the chemical composition of riparian leaf litter and, aquatic organisms and, consequently, leaf breakdown. We evaluated the effects of different scenarios combining increased temperature and carbon dioxide (CO₂) on leaf detritus of Hevea spruceana (Benth) Müll. and decomposers (insect shredders and microorganisms). We hypothesized that simulated climate change (warming and elevated CO₂) would: i) decrease leaf-litter quality, ii) decrease survival and leaf breakdown by shredders, and iii) increase microbial leaf breakdown and fungal biomass. We performed the experiment in four microcosm chambers that simulated air temperature and CO₂ changes in relation to a real-time control tracking current conditions in Manaus, Amazonas, Brazil. The experiment lasted seven days. During the experiment mean air temperature and CO₂ concentration ranged from 26.96 ± 0.98ºC and 537.86 ± 18.36 ppmv in the control to 31.75 ± 0.50ºC and 1636.96 ± 17.99 ppmv in the extreme chamber, respectively. However, phosphorus concentration in the leaf litter decreased with warming and elevated CO₂. Leaf quality (percentage of carbon, nitrogen, phosphorus, cellulose and lignin) was not influenced by soil flooding. Fungal biomass and microbial leaf breakdown were positively influenced by temperature and CO₂ increase and reached their highest values in the intermediate condition. Both total and shredder leaf breakdown, and shredder survival rate were similar among all climatic conditions. Thus, low leaf-litter quality due to climate change and higher leaf breakdown under intermediate conditions may indicate an increase of riparian metabolism due to temperature and CO₂ increase, highlighting the risk (e.g., decreased productivity) of global warming for tropical streams.

The size distribution of organic carbon in headwater streams in the Amazon basin

Despite the strong representativeness of streams in the Amazon basin, their role in the accumulation of coarse particulate organic carbon (CPOC), fine particulate organic carbon (FPOC), and dissolved organic carbon (DOC) in transport, an important energy source in these environments, is poorly known. It is known that the arboreal vegetation in the Amazon basin is influenced by soil fertility and rainfall gradients, but would these gradients promote local differences in organic matter in headwater streams? To answer this question, 14 low-order streams were selected within these gradients along the Amazon basin, with extensions that varied between 4 and 8 km. The efficiency of the transformation of particulate into dissolved carbon fractions was assessed for each stream. The mean monthly benthic organic matter storage ranged between 1.58 and 9.40 t ha(-1) month(-1). In all locations, CPOC was the most abundant fraction in biomass, followed by FPOC and DOC. Rainfall and soil fertility influenced the distribution of the C fraction (p = 0.01), showing differentiated particulate organic carbon (POC) storage and DOC transportation along the basin. Furthermore, the results revealed that carbon quantification at the basin level could be underestimated, ultimately influencing the global carbon calculations for the region. This is especially due to the fact that the majority of studies consider only fine particulate organic matter and dissolved organic matter, which represent less than 50 % of the stored and transported carbon in streambeds.

Estimating the global conservation status of more than 15,000 Amazonian tree species

Estimates of extinction risk for Amazonian plant and animal species are rare and not often incorporated into land-use policy and conservation planning. We overlay spatial distribution models with historical and projected deforestation to show that at least 36% and up to 57% of all Amazonian tree species are likely to qualify as globally threatened under International Union for Conservation of Nature (IUCN) Red List criteria. If confirmed, these results would increase the number of threatened plant species on Earth by 22%. We show that the trends observed in Amazonia apply to trees throughout the tropics, and we predict that most of the world's >40,000 tropical tree species now qualify as globally threatened. A gap analysis suggests that existing Amazonian protected areas and indigenous territories will protect viable populations of most threatened species if these areas suffer no further degradation, highlighting the key roles that protected areas, indigenous peoples, and improved governance can play in preventing large-scale extinctions in the tropics in this century.

Seed germination and seedling development in response to submergence in tree species of the Central Amazonian floodplains

Successful germination and seedling establishment are crucial steps for maintenance and expansion of plant populations and recovery from perturbations. Every year the Amazon River and its tributaries overflow and flood the adjacent forest, exerting a strong selective pressure on traits related to seedling recruitment. We examined seed characteristics, stored reserves, germination, seedling development and survival under water of eight representative tree species from the lower portions of the flood-level gradient to identify adaptive strategies that contribute to their regeneration in this extreme ecosystem. Submerged seedlings were assessed for longevity and survival until they showed symptoms of injury. At this point, the remaining healthy seedlings were planted in unsaturated soil to monitor recovery after re-exposure to air over 30 days. All small (seed mass ≤0.17 g) seeds had epigeal phanerocotylar-type germination, a trait that would allow plants to acquire light and CO2 in the shortest time. Cell wall storage polysaccharide was a major component of all seeds, suggesting plant investment in structural reserves. Seven of the eight species germinated and formed healthy seedlings under water that endured submersion without any apparent injury for periods of 20-115 days, depending on the species. Seedlings of some species changed the direction of root growth and grew towards the surface of the water, which might have increased the uptake of oxygen to the tissues. Only one of the seven species did not survive re-exposure to air. Species able to germinate and produce seedlings under submersion, which subsequently are able to establish in aerated soils, would have more time available for terrestrial growth. This is critical for colonization of lower portions of the flood-level gradient where establishment is constrained by the short terrestrial phase that precedes the next flood.

Experimental study on the survival of the water hyacinth (Eichhornia crassipes (Mart.) Solms--Pontederiaceae) under different oil doses and times of exposure

In the last decades, petroleum activities have increased in the Brazilian Amazon where there is oil exploration on the Urucu River, a tributary of the Amazon River, about 600 km from the city of Manaus. Particularly, transportation via the Amazon River to reach the oil refinery in Manaus may compromise the integrity of the large floodplains that flank hundreds of kilometers of this major river. In the Amazon floodplains, plant growth and nutrient cycling are related to the flood pulse. When oil spills occur, floating oil on the water surface is dispersed through wind and wave action in the littoral region, thus affecting the vegetation of terrestrial and aquatic environments. If pollutants enter the system, they are absorbed by plants and distributed in the food chain via plant consumption, mortality, and decomposition. The effect of oil on the growth and survival of vegetation in these environments is virtually unknown. The water hyacinth [Eichhornia crassipes (Mart.) Solms] has a pantropical distribution but is native to the Amazon, often growing in high-density populations in the floodplains where it plays an important role as shelter and food source for aquatic and terrestrial biota. The species is well known for its high capacity to absorb and tolerate high levels of heavy metal ions. To study the survival and response of water hyacinth under six different oil doses, ranging from 0 to 150 ml l(-1), and five exposure times (1, 5, 10, 15, and 20 days), young individuals distributed in a completely randomized design experiment composed of vessels with a single individual each were followed over a 50-day period (30-day acclimatization, 20 days under oil treatments). Growth parameters, biomass, visual changes in the plants, and pH were recorded at 1, 5, 10, 15, and 20 days. Increasing the time of oil exposure caused a decrease in biomass, ratio of live/dead biomass and length of leaves, and an increase in the number of dead leaves. Dose of oil and time of exposure are the most important factors controlling the effects of petroleum hydrocarbons on E. crassipes. Although the species is able to survive exposure to a moderate dose of oil, below 75 ml l(-1) for only 5 days, severe alterations in plant growth and high mortality were observed. Therefore, we conclude that Urucu oil heavily affects E. crassipes despite its known resistance to many pollutants.

Hyperdominance in the Amazonian tree flora

The vast extent of the Amazon Basin has historically restricted the study of its tree communities to the local and regional scales. Here, we provide empirical data on the commonness, rarity, and richness of lowland tree species across the entire Amazon Basin and Guiana Shield (Amazonia), collected in 1170 tree plots in all major forest types. Extrapolations suggest that Amazonia harbors roughly 16,000 tree species, of which just 227 (1.4%) account for half of all trees. Most of these are habitat specialists and only dominant in one or two regions of the basin. We discuss some implications of the finding that a small group of species--less diverse than the North American tree flora--accounts for half of the world's most diverse tree community.

Root anoxia effects on physiology and emissions of volatile organic compounds (VOC) under short- and long-term inundation of trees from Amazonian floodplains

Volatile organic compound (VOC) emissions are affected by a variety of biotic and abiotic factors such as light intensity, temperature, CO₂ and drought. Another stress factor, usually overlooked but very important for the Amazon region, is flooding. We studied the exchange of VOCs in relation to CO₂ exchange and transpiration of 8 common tree species from the Amazonian floodplain forest grown up from seeds using a dynamic enclosure system. Analysis of volatile organics was performed by PTR-MS fast online measurements. Our study confirmed emissions of ethanol and acetaldehyde at the beginning of root anoxia after inundation, especially in less anoxia adapted species such as Vatairea guianensis, but not for Hevea spruceana probably due to a better adapted metabolism. In contrast to short-term inundation, long-term flooding of the root system did not result in any emission of ethanol or/and acetaldehyde. Emission of other VOCs, such as isoprenoids, acetone, and methanol exhibited distinct behavior related to the origin (igapó or várzea type of floodplain) of the tree species. Also physiological activities exhibited different response patterns for trees from igapó or várzea. In general, isoprenoid emissions increased within the course of some days of short-term flooding. After a long period of waterlogging, VOC emissions decreased considerably, along with photosynthesis, transpiration and stomatal conductance. However, even under long-term testing conditions, two tree species did not show any significant decrease or increase in photosynthesis. In order to understand ecophysiological advantages of the different responses we need field investigations with adult tree species.

Time of exposure and oil dosage affecting biomass production of the Amazonian semi-aquatic grass Echinochloa polystachya

Abstract The effects of Urucu crude oil on growth and biomass production of Echinochloa polystachya were studied experimentally. Young plants contaminated with 5 oil doses (0 to 2.64 l.m-2) were monitored at 1, 5, 10, 15 and 20 days after exposure. A significant reduction was observed in leaf humidity and the ratio of live aerial/ total biomass related to the increase in oil dosage. Increased exposition time caused a reduction in the number of leaves, aerial biomass, proportion of live aerial/total biomass, total biomass, and an increase of dead aerial biomass. However, root biomass and leaf length were not affected by exposure to oil. The low tolerance of E. polystachya to Urucu crude oil has lead to the mortality of 90% of the plant population in 20 days at the 2.64 l treatment. The death of young individuals of E. polystachya by relatively low dosages of Urucu oil indicates that, in the case of an oil spill in the Amazon varzea, this species would be severely affected, endangering, consequently, the entire environment.

O período da contaminação com petróleo influencia a rebrota de Echinochloa polystachya (H.B.K.) Hitchcock em solo de várzea da Amazônia Central?

Diversos fatores podem influenciar o impacto do petróleo no meio ambiente. No entanto, embora seja sabido que o efeito dos poluentes pode mudar ao longo do ano de acordo com as variações sazonais em parâmetros ambientais, esse efeito é pobremente estudado na região tropical. Foi estudado o efeito do petróleo de Urucu sobre o rebrotamento e crescimento de Echinochloa polystachya durante 63 dias, em plantios estabelecidos em casa de vegetação em dois períodos do ano, "A" (julho a setembro) e "B" (setembro a novembro). Os propágulos foram plantados em frascos com 2 L de solo contaminado pela mistura de 6 dosagens de petróleo, distribuídas entre 0 e 0,231 L óleo m-2 de solo. Em resposta ao aumento da dosagem do petróleo houve diminuição da biomassa total, da biomassa aérea viva/total, da biomassa aérea, do comprimento das folhas e do número de folhas. O período de plantio influenciou a resposta das plantas à dosagem aplicada o que foi positivamente correlacionado a alterações climáticas, com efeitos negativos acentuados no período "B", de temperaturas mais elevadas. Pode-se concluir que o período de exposição influencia a propagação vegetativa e crescimento das plantas jovens, sendo um derrame no período de temperaturas mais altas mais prejudicial para essa espécie.

Plant reproduction in the Central Amazonian floodplains: challenges and adaptations

BACKGROUND

The Central Amazonian floodplain forests are subjected to extended periods of flooding and to flooding amplitudes of 10 m or more. The predictability, the length of the flood pulse, the abrupt transition in the environmental conditions along topographic gradients on the banks of major rivers in Central Amazonia, and the powerful water and sediment dynamics impose a strong selective pressure on plant reproduction systems.

SCOPE

In this review, we examine how the hydrological cycle influences the strategies of sexual and asexual reproduction in herbaceous and woody plants. These are of fundamental importance for the completion of the life cycle. Possible constraints to seed germination, seedling establishment and formation of seed banks are also covered. Likewise, we also discuss the importance of river connectivity for species propagation and persistence in floodplains.

CONCLUSIONS

The propagation and establishment strategies employed by the highly diversified assortment of different plant life forms result in contrasting successional stages and a zonation of plant assemblages along the flood-level gradient, whose species composition and successional status are continuously changing not only temporally but also spatially along the river channel.

The role of carbohydrates in seed germination and seedling establishment of Himatanthus sucuuba, an Amazonian tree with populations adapted to flooded and non-flooded conditions

BACKGROUND AND AIMS

In the Amazonian floodplains plants withstand annual periods of flooding which can last 7 months. Under these conditions seedlings remain submerged in the dark for long periods since light penetration in the water is limited. Himatanthus sucuuba is a tree species found in the 'várzea' (VZ) floodplains and adjacent non-flooded 'terra-firme' (TF) forests. Biochemical traits which enhance flood tolerance and colonization success of H. sucuuba in periodically flooded environments were investigated.

METHODS

Storage carbohydrates of seeds of VZ and TF populations were extracted and analysed by HPAEC/PAD. Starch was analysed by enzyme (glucoamylase) degradation followed by quantification of glucose oxidase. Carbohydrate composition of roots of VZ and TF seedlings was studied after experimental exposure to a 15-d period of submersion in light versus darkness.

KEY RESULTS

The endosperm contains a large proportion of the seed reserves, raffinose being the main non-structural carbohydrate. Around 93 % of the cell wall storage polysaccharides (percentage dry weight basis) in the endosperm of VZ seeds was composed of mannose, while soluble sugars accounted for 2.5%. In contrast, 74 % of the endosperm in TF seeds was composed of galactomannans, while 22 % of the endosperm was soluble sugars. This suggested a larger carbohydrate allocation to germination in TF populations whereas VZ populations allocate comparatively more to carbohydrates mobilized during seedling development. The concentration of root non-structural carbohydrates in non-flooded seedlings strongly decreased after a 15-d period of darkness, whereas flooded seedlings were less affected. These effects were more pronounced in TF seedlings, which showed significantly lower root non-structural carbohydrate concentrations.

CONCLUSIONS

There seem to be metabolic adjustments in VZ but not TF seedlings that lead to adaptation to the combined stresses of darkness and flooding. This seems to be important for the survival of the species in these contrasting environments, leading these populations to different directions during evolution.