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Nakai Y, Kumagai K, Ino Y, Akiyama T, Moriyama K, Takeda Y, Egashira K, Ohira T, Ryo A, Saito T, Inaba Y, Hirano H, Kimura Y. Use of data-independent acquisition mass spectrometry to identify an objective serum indicator of the need for osteoporotic therapeutic intervention. J Proteomics 2024; 300:105166. [PMID: 38574990 DOI: 10.1016/j.jprot.2024.105166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Revised: 02/21/2024] [Accepted: 03/31/2024] [Indexed: 04/06/2024]
Abstract
Osteoporosis is characterized by weakened bone microstructure and loss of bone mass. Current diagnostic criteria for osteoporosis are based on the T-score, which is a measure of bone mineral density. However, osteoporotic fragility fractures can occur regardless of the T-score, underscoring the need for additional criteria for the early detection of patients at fracture risk. To identify indicators of reduced bone strength, we performed serum proteomic analysis using data-independent acquisition mass spectrometry with serum samples from two patient groups, one with osteoporosis but no fractures and the other with osteopenia and fragility fractures. Collective evaluation of the results identified six serum proteins that changed to a similar extent in both patient groups compared with controls. Of these, extracellular matrix protein 1 (ECM1), which contributes to bone formation, showed the most significant increase in serum levels in both patient groups. An ELISA-based assay suggested that ECM1 could serve as a serum indicator of the need for therapeutic intervention; however, further prospective studies with a larger sample size are necessary to confirm these results. The present findings may contribute to the provision of early and appropriate therapeutic strategies for patients at risk of osteoporotic fractures. SIGNIFICANCE: This study aimed to identify objective serum indicators of the need for therapeutic intervention in individuals at risk of osteoporotic fracture. Comprehensive proteome analyses of serum collected from patients with osteoporosis but no fractures, patients with osteopenia and fragility fractures, and controls were performed by data-independent acquisition mass spectrometry. Collective evaluation of the proteome analysis data and ELISA-based assays identified serum ECM1 as a potential objective marker of the risk of fragility fractures in patients with osteoporosis or osteopenia. The findings are an important step toward the development of appropriate bone health management methods to improve well-being and maintain quality of life.
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Affiliation(s)
- Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Ken Kumagai
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
| | - Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Tomoko Akiyama
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Kayano Moriyama
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Yuriko Takeda
- Department of Biostatistics, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
| | - Kenji Egashira
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan; R&D Headquarters, LION Corporation, Tokyo 132-0035, Japan
| | - Takashi Ohira
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan; Department of Physiology and Regenerative Medicine, Kindai University Faculty of Medicine, Osaka 589-8511, Japan
| | - Akihide Ryo
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Tomoyuki Saito
- Yokohama Brain and Spine Center, Yokohama 235-0012, Japan
| | - Yutaka Inaba
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan.
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Kimura Y, Nakai Y, Ino Y, Akiyama T, Moriyama K, Aiba T, Ohira T, Egashira K, Yamamoto Y, Takeda Y, Inaba Y, Ryo A, Saito T, Kumagai K, Hirano H. Changes in the astronaut serum proteome during prolonged spaceflight. Proteomics 2024; 24:e2300328. [PMID: 38185763 DOI: 10.1002/pmic.202300328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 09/01/2023] [Accepted: 12/20/2023] [Indexed: 01/09/2024]
Abstract
The molecular mechanisms associated with spaceflight-induced biological adaptations that may affect many healthy tissue functions remain poorly understood. In this study, we analyzed temporal changes in the serum proteome of six astronauts during prolonged spaceflight missions using quantitative comprehensive proteome analysis performed with the data-independent acquisition method of mass spectrometry (DIA-MS). All six astronauts participated in a spaceflight mission for approximately 6 months and showed a decreasing trend in T-scores at almost all sites where dual-energy X-ray absorptiometry scans were performed. DIA-MS successfully identified 624 nonredundant proteins in sera and further quantitative analysis for each sampling point provided information on serum protein profiles closely related to several time points before (pre-), during (in-), and after (post-) spaceflight. Changes in serum protein levels between spaceflight and on the ground suggest that abnormalities in bone metabolism are induced in astronauts during spaceflight. Furthermore, changes in the proteomic profile occurring during spaceflight suggest that serum levels of bone metabolism-related proteins, namely ALPL, COL1A1, SPP1, and POSTN, could serve as highly responsive indicators of bone metabolism status in spaceflight missions. This study will allow us to accelerate research to improve our understanding of the molecular mechanisms of biological adaptations associated with prolonged spaceflight.
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Affiliation(s)
- Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Tomoko Akiyama
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Kayano Moriyama
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Tatsuya Aiba
- Japan Aerospace Exploration Agency, Tsukuba, Japan
| | - Takashi Ohira
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
- Department of Physiology and Regenerative Medicine, Kindai University Faculty of Medicine, Osaka, Japan
| | - Kenji Egashira
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
- R&D Headquarters, LION Corporation, Tokyo, Japan
| | - Yu Yamamoto
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
- R&D Headquarters, LION Corporation, Tokyo, Japan
| | - Yuriko Takeda
- Department of Biostatistics, Yokohama City University School of Medicine, Yokohama, Japan
| | - Yutaka Inaba
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama, Japan
| | - Akihide Ryo
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | | | - Ken Kumagai
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama, Japan
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
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Kimura Y, Nakai Y, Ino Y, Akiyama T, Moriyama K, Ohira T, Saito T, Inaba Y, Kumagai K, Ryo A, Hirano H. Identification of gravity-responsive serum proteins in spaceflight mice using a quantitative proteomic approach with data-independent acquisition mass spectrometry. Proteomics 2024; 24:e2300214. [PMID: 38475964 DOI: 10.1002/pmic.202300214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 03/05/2024] [Accepted: 03/05/2024] [Indexed: 03/14/2024]
Abstract
Physical inactivity associated with gravity unloading, such as microgravity during spaceflight and hindlimb unloading (HU), can cause various physiological changes. In this study, we attempted to identify serum proteins whose levels fluctuated in response to gravity unloading. First, we quantitatively assessed changes in the serum proteome profiles of spaceflight mice using mass spectrometry with data-independent acquisition. The serum levels of several proteins involved in the responses to estrogen and glucocorticoid, blood vessel maturation, osteoblast differentiation, and ossification were changed by microgravity exposure. Furthermore, a collective evaluation of serum proteomic data from spaceflight and HU mice identified 30 serum proteins, including Mmp2, Igfbp2, Tnc, Cdh5, and Pmel, whose levels varied to a similar extent in both gravity unloading models. These changes in serum levels could be involved in the physiological changes induced by gravity unloading. A collective evaluation of serum, femur, and soleus muscle proteome data of spaceflight mice also showed 24 serum proteins, including Igfbp5, Igfbp3, and Postn, whose levels could be associated with biological changes induced by microgravity. This study examined serum proteome profiles in response to gravity unloading, and may help deepen our understanding of microgravity adaptation mechanisms during prolonged spaceflight missions.
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Affiliation(s)
- Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Tomoko Akiyama
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Kayano Moriyama
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Takashi Ohira
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
- Department of Physiology and Regenerative Medicine, Kindai University Faculty of Medicine, Osaka, Japan
| | | | - Yutaka Inaba
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama, Japan
| | - Ken Kumagai
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama, Japan
| | - Akihide Ryo
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
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Tsutsumi-Arai C, Arai Y, Tran A, Salinas M, Nakai Y, Orikasa S, Ono W, Ono N. A PTHrP Gradient Drives Mandibular Condylar Chondrogenesis via Runx2. J Dent Res 2024; 103:91-100. [PMID: 38058151 PMCID: PMC10734211 DOI: 10.1177/00220345231208175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2023] Open
Abstract
The mandibular condylar cartilage (MCC) is an essential component of the temporomandibular joint, which orchestrates the vertical growth of the mandibular ramus through endochondral ossification with distinctive modes of cell differentiation. Parathyroid hormone-related protein (PTHrP) is a master regulator of chondrogenesis; in the long bone epiphyseal growth plate, PTHrP expressed by resting zone chondrocytes promotes chondrocyte proliferation in the adjacent layer. However, how PTHrP regulates chondrogenesis in the MCC remains largely unclear. In this study, we used a Pthrp-mCherry knock-in reporter strain to map the localization of PTHrP+ cells in the MCC and define the function of PTHrP in the growing mandibular condyle. In the postnatal MCC of PthrpmCherry/+ mice, PTHrP-mCherry was specifically expressed by cells in the superficial layer immediately adjacent to RUNX2-expressing cells in the polymorphic layer. PTHrP ligands diffused across the polymorphic and chondrocyte layers where its cognate receptor PTH1R was abundantly expressed. We further analyzed the mandibular condyle of PthrpmCherry/mCherry mice lacking functional PTHrP protein (PTHrP-KO). At embryonic day (E) 18.5, the condylar process and MCC were significantly truncated in the PTHrP-KO mandible, which was associated with a significant reduction in cell proliferation across the polymorphic layer and a loss of SOX9+ cells in the chondrocyte layers. The PTHrP-KO MCC showed a transient increase in the number of Col10a1+ hypertrophic chondrocytes at E15.5, followed by a significant loss of these cells at E18.5, indicating that superficial layer-derived PTHrP prevents premature chondrocyte exhaustion in the MCC. The expression of Runx2, but not Sp7, was significantly reduced in the polymorphic layer of the PTHrP-KO MCC. Therefore, PTHrP released from cells in the superficial layer directly acts on cells in the polymorphic layer to promote proliferation of chondrocyte precursor cells and prevent their premature differentiation by maintaining Runx2 expression, revealing a unique PTHrP gradient-directed mechanism that regulates MCC chondrogenesis.
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Affiliation(s)
- C. Tsutsumi-Arai
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
| | - Y. Arai
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
| | - A. Tran
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
| | - M. Salinas
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
| | - Y. Nakai
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
| | - S. Orikasa
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
| | - W. Ono
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
| | - N. Ono
- University of Texas Health Science Center at Houston School of Dentistry, Houston, TX, USA
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Ueda H, Katakami S, Okada M, Yoshida S, Nakai Y, Mito T, Mizumaki M. Efficient NMR measurement and data analysis supported by the Bayesian inference: The case of the heavy fermion compound YbCo 2Zn 20. J Magn Reson 2023; 357:107585. [PMID: 37952430 DOI: 10.1016/j.jmr.2023.107585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 10/30/2023] [Accepted: 10/31/2023] [Indexed: 11/14/2023]
Abstract
We propose a data-driven technique to infer microscopic physical quantities from nuclear magnetic resonance (NMR) spectra, in which the data size and quality required for the Bayesian inference are investigated. The 59Co-NMR measurement of YbCo2Zn20 single crystal generates complex spectra with 28 peaks. By exploiting the site symmetry in the crystal structure, the isotropic Knight shift Kiso and nuclear quadrupole resonance (NQR) frequency νQ were respectively estimated to be Kiso=0.7822±0.0090% and νQ=2.008±0.016 MHz (T=20 K and H≃10.2 T) by analyzing only 30 data points from one spectrum. The estimated νQ is consistent with the precise value obtained in the NQR experiment. Our method can significantly reduce the measurement time and the computational cost of data analysis in NMR experiments.
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Affiliation(s)
- H Ueda
- Department of Complexity Science and Engineering, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8561, Japan
| | - S Katakami
- Department of Complexity Science and Engineering, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8561, Japan
| | - M Okada
- Department of Complexity Science and Engineering, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8561, Japan.
| | - S Yoshida
- Department of Material Science, Graduate School of Science, University of Hyogo, Ako-gun, Hyogo, 678-1297, Japan
| | - Y Nakai
- Department of Material Science, Graduate School of Science, University of Hyogo, Ako-gun, Hyogo, 678-1297, Japan
| | - T Mito
- Department of Material Science, Graduate School of Science, University of Hyogo, Ako-gun, Hyogo, 678-1297, Japan
| | - M Mizumaki
- Faculty of Science, Course for Physical Sciences, Kumamoto University, Kurokami, Kumamoto 860-8555, Japan
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Yamaki K, Egi T, Segawa K, Tomonaka A, Nakai Y, Koyama Y. Co-induced Allergic Response to an Unrelated Allergen Exacerbates Imiquimod-Induced Psoriasis in Mice. Biol Pharm Bull 2023; 46:1484-1489. [PMID: 37599076 DOI: 10.1248/bpb.b23-00353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/22/2023]
Abstract
Psoriasis is classically regarded as a T-helper 1 (Th1) response-dominant disease believed to be antagonized by the Th2 response, which is responsible for allergic diseases, such as atopic dermatitis. The roles of these responses in psoriasis and the relationship between psoriasis and atopic dermatitis have received increasing attention because it is estimated that more than one million patients are concomitantly affected by psoriasis and atopic dermatitis. To address this, we attempted to determine the characteristics of imiquimod-induced psoriasiform lesions in mice with a concomitant allergic response after co-application of the unrelated allergen ovalbumin onto the skin. Imiquimod cream containing ovalbumin was successively applied to the right back skin of hairless HR female mice. Psoriasiform scores were determined for 11 d, and then, the resected skin thickness, spleen weight, and serum antibody levels were examined. In some experiments, mice were allowed free access to ovalbumin-containing water for 10 d before skin application to induce oral tolerance. Imiquimod cream induced psoriasis, and its severity increased upon simultaneous ovalbumin treatment. Increases in anti-ovalbumin immunoglobulin G2a (IgG2a) levels, a Th1 response indicator, and IgG1 and IgE levels, Th2 response indicators, were mediated by ovalbumin addition. Oral tolerance against ovalbumin effectively decreased ovalbumin-exacerbated imiquimod-induced psoriasis, in parallel with a decrease in levels of anti-ovalbumin antibodies. These results suggest that the concomitant allergic response induced by ovalbumin application exacerbates imiquimod-induced psoriasis. This implies that allergic responses to unrelated allergens might exacerbate psoriasis in humans and that modulating such responses could be an effective new approach to treat psoriasis.
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Affiliation(s)
- Kouya Yamaki
- Department of Pharmacology, Kobe Pharmaceutical University
| | - Taichi Egi
- Department of Pharmacology, Kobe Pharmaceutical University
| | - Kouki Segawa
- Department of Pharmacology, Kobe Pharmaceutical University
| | - Ayano Tomonaka
- Department of Pharmacology, Kobe Pharmaceutical University
| | - Yusuke Nakai
- Department of Pharmacology, Kobe Pharmaceutical University
| | - Yutaka Koyama
- Department of Pharmacology, Kobe Pharmaceutical University
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Egashira K, Ino Y, Nakai Y, Ohira T, Akiyama T, Moriyama K, Yamamoto Y, Kimura M, Ryo A, Saito T, Inaba Y, Hirano H, Kumagai K, Kimura Y. Identification of gravity-responsive proteins in the femur of spaceflight mice using a quantitative proteomic approach. J Proteomics 2023; 288:104976. [PMID: 37482271 DOI: 10.1016/j.jprot.2023.104976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Revised: 07/11/2023] [Accepted: 07/17/2023] [Indexed: 07/25/2023]
Abstract
Although the microgravity (μ-g) environment that astronauts encounter during spaceflight can cause severe acute bone loss, the molecular mechanism of this bone loss remains unclear. To investigate the gravity-response proteins involved in bone metabolism, it is important to comprehensively determine which proteins exhibit differential abundance associated with mechanical stimuli. However, comprehensive proteomic analysis using small bone samples is difficult because protein extraction in mineralized bone tissue is inefficient. Here, we established a high-sensitivity analysis system for mouse bone proteins using data-independent acquisition mass spectrometry. This system successfully detected 40 proteins in the femoral diaphysis showing differential abundance between mice raised in a μ-g environment, where the bone mass was reduced by gravity unloading, and mice raised in an artificial 1-gravity environment on the International Space Station. Additionally, 22 proteins, including noncollagenous bone matrix proteins, showed similar abundance between the two groups in the mandible, where bone mass was unaltered due to mastication stimuli, suggesting that these proteins are responsive to mechanical stimuli. One of these proteins, SPARCL1, is suggested to promote osteoclastogenesis induced by receptor activator of nuclear factor-κB ligand. We expect these findings to lead to new insights into the mechanisms of bone metabolism induced by mechanical stimuli. SIGNIFICANCE: We aimed to investigate the gravity-response proteins involved in bone metabolism. To this end, we established a comprehensive analysis system for mouse bone proteins using data-independent acquisition mass spectrometry, which is particularly useful in comprehensively analyzing the bone proteome using small sample volumes. In addition, a comprehensive proteomic analysis of the femoral diaphysis and mandible, which exhibit different degrees of bone loss in mice raised on the International Space Station, identified proteins that respond to mechanical stimuli. SPARCL1, a mechanical stimulus-responsive protein, was consequently suggested to be involved in osteoclast differentiation associated with bone remodeling. Our findings represent an important step toward elucidating the molecular mechanism of bone metabolism induced by mechanical stimuli.
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Affiliation(s)
- Kenji Egashira
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan; R&D Headquarters, LION Corporation, Tokyo 132-0035, Japan
| | - Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Takashi Ohira
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan; Department of Physiology and Regenerative Medicine, Kindai University Faculty of Medicine, Osaka 589-8511, Japan
| | - Tomoko Akiyama
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Kayano Moriyama
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Yu Yamamoto
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan; R&D Headquarters, LION Corporation, Tokyo 132-0035, Japan
| | - Mitsuo Kimura
- R&D Headquarters, LION Corporation, Tokyo 132-0035, Japan
| | - Akihide Ryo
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Tomoyuki Saito
- Yokohama Brain and Spine Center, Yokohama 235-0012, Japan
| | - Yutaka Inaba
- Department of Orthopaedic Surgery, Yokohama City University, Yokohama 236-0004, Japan
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Ken Kumagai
- Department of Orthopaedic Surgery, Yokohama City University, Yokohama 236-0004, Japan
| | - Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan.
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Ino Y, Ohira T, Kumagai K, Nakai Y, Akiyama T, Moriyama K, Takeda Y, Saito T, Ryo A, Inaba Y, Hirano H, Kimura Y. Identification of mouse soleus muscle proteins altered in response to changes in gravity loading. Sci Rep 2023; 13:15768. [PMID: 37737267 PMCID: PMC10517164 DOI: 10.1038/s41598-023-42875-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Accepted: 09/15/2023] [Indexed: 09/23/2023] Open
Abstract
Gravity-dependent physical processes strongly affect the ability of elderly people to maintain musculoskeletal health by reducing muscle atrophy and increasing bone mineral density, thereby increasing quality of life. A need therefore exists to identify molecules in the musculoskeletal system that are responsive to gravitational loading and to establish an objective indicator for the maintenance of healthy musculoskeletal systems. Here, we performed an integrated assessment of the results of soleus muscle proteomic analyses in three model mouse experiments under different gravity environments (hypergravity, hindlimb unloading, and spaceflight). Myl6b, Gpd1, Fbp2, Pvalb, and Actn3 were shown to be gravity-responsive muscle proteins, and alterations in the levels of these proteins indicated changes in muscle fiber type to slow-twitch type due to gravity loading. In addition, immunoblotting and enzyme-linked immunosorbent assays revealed that Pvalb levels in the sera of hindlimb-unloaded mice and osteoporosis patients were higher than in control subjects, suggesting that Pvalb levels might be useful to objectively evaluate soleus muscle atrophy and bone loss.
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Affiliation(s)
- Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan
| | - Takashi Ohira
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan.
- Department of Physiology and Regenerative Medicine, Kindai University Faculty of Medicine, Ohno-Higashi 377-2, Osaka-Sayama, Osaka, Japan.
| | - Ken Kumagai
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama, Japan
| | - Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan
| | - Tomoko Akiyama
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan
| | - Kayano Moriyama
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan
| | - Yuriko Takeda
- Department of Biostatistics, Yokohama City University School of Medicine, Yokohama, Japan
| | | | - Akihide Ryo
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan
| | - Yutaka Inaba
- Department of Orthopaedic Surgery, Yokohama City University School of Medicine, Yokohama, Japan
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan
| | - Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Fukuura 3-9, Kanazawa-Ku, Yokohama, 236-0004, Japan.
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Nakai Y, Noda A, Yamamoto E. Algorithm for the early prediction of drug stability using bayesian inference and multiple measurements: Application for predicting the stability of silodosin tablets. J Pharm Biomed Anal 2023; 233:115442. [PMID: 37182365 DOI: 10.1016/j.jpba.2023.115442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Revised: 04/27/2023] [Accepted: 05/02/2023] [Indexed: 05/16/2023]
Abstract
The stability of active pharmaceutical ingredients (APIs) and formulations has become a major chemistry, manufacturing, and control (CMC) concern in the pharmaceutical industry because it can determine the feasibility of research and development, the development period, and the development costs of a certain formulation. To streamline the research and development of pharmaceutical products and create useful pharmaceutical products at an early stage, a technology that predicts the stability of formulations at an early stage and with a high degree of accuracy is needed. When predicting the stability of a substance, highly reliable data are required; however, the stability data are affected by analytical variations that depend on the experimenter, measurement device, and conditions used. Although these variations greatly affect the prediction accuracy, a stability prediction method that considers these variations has not yet been developed. Here, short-term stability data under accelerated conditions were obtained at three institutions using silodosin tablets as a model sample. By combining Bayesian inference with the temporal change in the amount of the main degradation products obtained and the conventional humidity-corrected Arrhenius equation, we developed a new algorithm that provides a narrow confidence interval, even when using data with variations. By using this algorithm and setting an appropriate number of conditions, we were able to obtain a valid confidence intervals in a short period of time. Here, by performing more measurements than those suggested by the minimum measurement frequency indicated in the guideline specified in the International Council for Harmonisation (ICH) of Technical Requirements for Pharmaceuticals for Human Use, we developed a method that can be used to reasonably predict the long-term stability of the drugs, even if the data measurement interval is short. Our results will help solve various problems in today's pharmaceutical product development scenario and contribute to worldwide health and welfare.
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Affiliation(s)
- Yusuke Nakai
- Shimadzu Corporation, Technology Research Laboratory, 3-9-4 Hikaridai, Seika-cho, Soraku-gun, Kyoto 619-0237, Japan.
| | - Akira Noda
- Shimadzu Corporation, Technology Research Laboratory, 3-9-4 Hikaridai, Seika-cho, Soraku-gun, Kyoto 619-0237, Japan
| | - Eiichi Yamamoto
- National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki, Kanagawa 210-9501, Japan.
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10
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Fujii T, Nakai Y, Hirata M, Hasegawa Y, Akahama Y, Ueda K, Mito T. Giant Density of States Enhancement Driven by a Zero-Mode Landau Level in Semimetallic Black Phosphorus under Pressure. Phys Rev Lett 2023; 130:076401. [PMID: 36867797 DOI: 10.1103/physrevlett.130.076401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 01/26/2023] [Indexed: 06/18/2023]
Abstract
Dirac fermion systems form a unique Landau level at the Fermi level-the so-called zero mode-whose observation itself will provide strong evidence of the presence of Dirac dispersions. Here, we report the study of semimetallic black phosphorus under pressure by ^{31}P-nuclear magnetic resonance measurements in a wide range of magnetic field up to 24.0 T. We have found a field-induced giant enhancement of 1/T_{1}T, where 1/T_{1} is the nuclear spin lattice relaxation rate: 1/T_{1}T at 24.0 T reaches more than 20 times larger than that at 2.0 T. The increase in 1/T_{1}T above 6.5 T is approximately proportional to the squared field, implying a linear relationship between the density of states and the field. We also found that, while 1/T_{1}T at a constant field is independent of temperature in the low-temperature region, it steeply increases with temperature above 100 K. All these phenomena are well explained by considering the effect of Landau quantization on three-dimensional Dirac fermions. The present study demonstrates that 1/T_{1} is an excellent quantity to probe the zero-mode Landau level and to identify the dimensionality of the Dirac fermion system.
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Affiliation(s)
- Takuto Fujii
- Department of Material Science, Graduate School of Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Yusuke Nakai
- Department of Material Science, Graduate School of Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Michihiro Hirata
- Institute for Materials Research, Tohoku University, Sendai 980-8577, Japan
| | - Yasumasa Hasegawa
- Department of Material Science, Graduate School of Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Yuichi Akahama
- Department of Material Science, Graduate School of Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Koichi Ueda
- Department of Material Science, Graduate School of Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Takeshi Mito
- Department of Material Science, Graduate School of Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
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11
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Nakai Y, Miyakawa K, Yamaoka Y, Hatayama Y, Nishi M, Suzuki H, Kimura H, Takahashi H, Kimura Y, Ryo A. Generation and Utilization of a Monoclonal Antibody against Hepatitis B Virus Core Protein for a Comprehensive Interactome Analysis. Microorganisms 2022; 10:microorganisms10122381. [PMID: 36557634 PMCID: PMC9783060 DOI: 10.3390/microorganisms10122381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Revised: 11/22/2022] [Accepted: 11/29/2022] [Indexed: 12/05/2022] Open
Abstract
Hepatitis B virus (HBV) core antigen (HBc) is a structural protein that forms the viral nucleocapsid and is involved in various steps of the viral replication cycle, but its role in the pathogenesis of HBV infection is still elusive. In this study, we generated a mouse monoclonal antibody (mAb) against HBc and used it in antibody-based in situ biotinylation analysis in order to identify host proteins that interact with HBc. HBc antigen was produced with a wheat germ cell-free protein synthesis system and used to immunize mice. Among the established hybridoma clones, a single clone (mAb #7) was selected and further characterized for its ability in the antibody-based in situ biotinylation analysis to collect host proteins that are in the vicinity of HBc. Using mass spectrometry, we identified 215 HBc-interacting host proteins, three of which bind HBc most significantly under hypoxic conditions. Our results indicate that mAb #7 can be used to systematically identify host proteins that interact with HBc under pathophysiological conditions, and thus may be useful to explore the molecular pathways involved in HBV-induced cytopathogenesis.
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Affiliation(s)
- Yusuke Nakai
- Department of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Kei Miyakawa
- Department of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
| | - Yutaro Yamaoka
- Department of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
- Life Science Laboratory, Technology and Development Division, Kanto Chemical Co., Inc., Isehara 259-1146, Japan
| | - Yasuyoshi Hatayama
- Department of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Mayuko Nishi
- Department of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
| | - Hidefumi Suzuki
- Department of Molecular Biology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
| | - Hirokazu Kimura
- Department of Health Science, Gunma Paz University Graduate School, Takasaki 370-0006, Japan
| | - Hidehisa Takahashi
- Department of Molecular Biology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
| | - Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
| | - Akihide Ryo
- Department of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan
- Advanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan
- Correspondence: ; Tel.: +81-45-787-2602
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12
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Wada KC, Inagaki N, Sakai H, Yamashita H, Nakai Y, Fujimoto Z, Yonemaru J, Itoh H. Genetic effects of Red Lettuce Leaf genes on red coloration in leaf lettuce under artificial lighting conditions. Plant Environ Interact 2022; 3:179-192. [PMID: 37283610 PMCID: PMC10168059 DOI: 10.1002/pei3.10089] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 07/15/2022] [Accepted: 08/05/2022] [Indexed: 06/08/2023]
Abstract
Some cultivars of lettuce accumulate anthocyanins, which act as functional food ingredients. Leaf lettuce has been known to be erratic in exhibiting red color when grown under artificial light, and there is a need for cultivars that more stably exhibit red color in artificial light cultivation. In this study, we aimed to dissect the genetic architecture for red coloring in various leaf lettuce cultivars grown under artificial light. We investigated the genotype of Red Lettuce Leaf (RLL) genes in 133 leaf lettuce strains, some of which were obtained from publicly available resequencing data. By studying the allelic combination of RLL genes, we further analyzed the contribution of these genes to producing red coloring in leaf lettuce. From the quantification of phenolic compounds and corresponding transcriptome data, we revealed that gene expression level-dependent regulation of RLL1 (bHLH) and RLL2 (MYB) is the underlying mechanism conferring high anthocyanin accumulation in red leaf lettuce under artificial light cultivation. Our data suggest that different combinations of RLL genotypes cause quantitative differences in anthocyanin accumulation among cultivars, and some genotype combinations are more effective at producing red coloration even under artificial lighting.
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Affiliation(s)
- Kaede C. Wada
- Breeding Big Data Management and Utilization Group, Division of Smart Breeding Research, Institute of Crop ScienceNational Agriculture and Food Research OrganizationTsukubaJapan
| | - Noritoshi Inagaki
- Biomacromolecules Research Unit, Research Center for Advanced Analysis, Core Technology Research HeadquartersNational Agriculture and Food Research OrganizationTsukubaJapan
| | - Hiroaki Sakai
- Bioinformatics Unit, Research Center for Advanced Analysis, Core Technology Research HeadquartersNational Agriculture and Food Research OrganizationTsukubaJapan
| | - Hiroto Yamashita
- Breeding Big Data Management and Utilization Group, Division of Smart Breeding Research, Institute of Crop ScienceNational Agriculture and Food Research OrganizationTsukubaJapan
| | - Yusuke Nakai
- Greenhouse Vegetable Production Group, Division of Field Crop and Vegetable Research, Kyushu‐Okinawa Agricultural Research CenterNational Agriculture and Food Research OrganizationKurumeJapan
| | - Zui Fujimoto
- Biomacromolecules Research Unit, Research Center for Advanced Analysis, Core Technology Research HeadquartersNational Agriculture and Food Research OrganizationTsukubaJapan
| | - Jun‐ichi Yonemaru
- Breeding Big Data Management and Utilization Group, Division of Smart Breeding Research, Institute of Crop ScienceNational Agriculture and Food Research OrganizationTsukubaJapan
| | - Hironori Itoh
- Breeding Big Data Management and Utilization Group, Division of Smart Breeding Research, Institute of Crop ScienceNational Agriculture and Food Research OrganizationTsukubaJapan
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13
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Ino Y, Kinoshita E, Kinoshita-Kikuta E, Akiyama T, Nakai Y, Nishino K, Osada M, Ryo A, Hirano H, Koike T, Kimura Y. Evaluation of four phosphopeptide enrichment strategies for mass spectrometry-based proteomic analysis. Proteomics 2021; 22:e2100216. [PMID: 34932266 DOI: 10.1002/pmic.202100216] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2021] [Revised: 12/07/2021] [Accepted: 12/14/2021] [Indexed: 11/07/2022]
Abstract
Information about phosphorylation status can be used to prioritize and characterize biological processes in the cell. Various analytical strategies have been proposed to address the complexity of phosphorylation status and comprehensively identify phosphopeptides. In this study, we evaluated four strategies for phosphopeptide enrichment, using titanium dioxide (TiO2 ) and Phos-tag ligand particles from in-gel or in-solution digests prior to mass spectrometry-based analysis. Using TiO2 and Phos-tag magnetic beads, it was possible to enrich phosphopeptides from in-gel digests of phosphorylated ovalbumin separated by Phos-tag SDS-PAGE or in-solution serum digests, while minimizing non-specific adsorption. The tip-column strategy with TiO2 particles enabled enrichment of phosphopeptides from in-solution digests of whole-cell lysates with high efficiency and selectivity. However, the tip-column strategy with Phos-tag agarose beads yielded the greatest number of identified phosphopeptides. The strategies using both types of tip columns had a high degree of overlap, although there were differences in selectivity between the identified phosphopeptides. Together, our results indicate that multi-enrichment strategies using TiO2 particles and Phos-tag agarose beads are useful for comprehensive phosphoproteomic analysis.
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Affiliation(s)
- Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan.,Graduate School of Health Sciences, Gunma Paz University, Takasaki City, Gunma, Japan
| | - Eiji Kinoshita
- Department of Human Nutrition, Faculty of Human Sciences, Hiroshima Bunkyo University, Hiroshima, Japan
| | - Emiko Kinoshita-Kikuta
- Department of Functional Molecular Science, Graduate School of Biomedical & Health Sciences, Hiroshima University, Hiroshima, Japan
| | - Tomoko Akiyama
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Kohei Nishino
- Kuramoto Division, Technical Support Department, Tokushima University, Tokushima, Japan
| | - Makoto Osada
- Graduate School of Health Sciences, Gunma Paz University, Takasaki City, Gunma, Japan
| | - Akihide Ryo
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan.,Department of Microbiology, Yokohama City University School of Medicine, Yokohama, Japan
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
| | - Tohru Koike
- Department of Functional Molecular Science, Graduate School of Biomedical & Health Sciences, Hiroshima University, Hiroshima, Japan
| | - Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Yokohama, Japan
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14
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Nakamura Y, Namikawa K, Yoshikawa S, Kiniwa Y, Maekawa T, Yamasaki O, Isei T, Matsushita S, Nomura M, Nakai Y, Fukushima S, Saito S, Takenouchi T, Tanaka R, Kato H, Otsuka A, Matsuya T, Baba N, Nagase K, Inozume T, Fujimoto N, Kuwatsuka Y, Onishi M, Kaneko T, Onuma T, Umeda Y, Ogata D, Takahashi A, Otsuka M, Teramoto Y, Yamazaki N. Anti-PD-1 antibody monotherapy versus anti-PD-1 plus anti-CTLA-4 combination therapy as first-line immunotherapy in unresectable or metastatic mucosal melanoma: a retrospective, multicenter study of 329 Japanese cases (JMAC study). ESMO Open 2021; 6:100325. [PMID: 34839104 PMCID: PMC8633880 DOI: 10.1016/j.esmoop.2021.100325] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Accepted: 10/29/2021] [Indexed: 01/14/2023] Open
Abstract
Background Anti-programmed cell death protein 1 (PD-1) antibody monotherapy (PD1) has led to favorable responses in advanced non-acral cutaneous melanoma among Caucasian populations; however, recent studies suggest that this therapy has limited efficacy in mucosal melanoma (MCM). Thus, advanced MCM patients are candidates for PD1 plus anti-cytotoxic T lymphocyte-associated antigen-4 (CTLA-4) combination therapy (PD1 + CTLA4). Data on the efficacy of immunotherapy in MCM, however, are limited. We aimed to compare the efficacies of PD1 and PD1 + CTLA4 in Japanese advanced MCM patients. Patients and methods We retrospectively assessed advanced MCM patients treated with PD1 or PD1 + CTLA4 at 24 Japanese institutions. Patient baseline characteristics, clinical responses (RECIST), progression-free survival (PFS), and overall survival (OS) were estimated using Kaplan–Meier analysis, and toxicity was assessed to estimate the efficacy and safety of PD1 and PD1 + CTLA4. Results Altogether, 329 patients with advanced MCM were included in this study. PD1 and PD1 + CTLA4 were used in 263 and 66 patients, respectively. Baseline characteristics were similar between both treatment groups, except for age (median age 71 versus 65 years; P < 0.001). No significant differences were observed between the PD1 and PD1 + CTLA4 groups with respect to objective response rate (26% versus 29%; P = 0.26) or PFS and OS (median PFS 5.9 months versus 6.8 months; P = 0.55, median OS 20.4 months versus 20.1 months; P = 0.55). Cox multivariate survival analysis revealed that PD1 + CTLA4 did not prolong PFS and OS (PFS: hazard ratio 0.83, 95% confidence interval 0.58-1.19, P = 0.30; OS: HR 0.89, 95% confidence interval 0.57-1.38, P = 0.59). The rate of ≥grade 3 immune-related adverse events was higher in the PD1 + CTLA4 group than in the PD1 group (53% versus 17%; P < 0.001). Conclusions First-line PD1 + CTLA4 demonstrated comparable clinical efficacy to PD1 in Japanese MCM patients, but with a higher rate of immune-related adverse events. Anti-PD-1 plus anti-CTLA-4 antibody therapy (PD1 + CTLA4) is an option for patients with advanced mucosal melanoma (MCM). Data on the efficacy of PD1 + CTLA4 compared with PD-1 monotherapy (PD1) for MCM, however, are limited. We retrospectively analyzed data from 329 Japanese patients with advanced MCM treated with PD1 or PD1 + CTLA4. No significant differences in objective response rate, progression-free survival, or overall survival were observed. Immune-related adverse events resulting in treatment cessation were higher in the PD1 + CTLA4 group.
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Affiliation(s)
- Y Nakamura
- Department of Skin Oncology/Dermatology, Saitama Medical University International Medical Center, Saitama, Japan.
| | - K Namikawa
- Department of Dermatologic Oncology, National Cancer Center Hospital, Tokyo, Japan
| | - S Yoshikawa
- Department of Dermatology, Shizuoka Cancer Center, Shizuoka, Japan
| | - Y Kiniwa
- Department of Dermatology, Shinshu University, Matsumoto, Japan
| | - T Maekawa
- Department of Dermatology, Jichi Medical University, Tochigi, Japan
| | - O Yamasaki
- Department of Dermatology, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Okayama, Japan
| | - T Isei
- Department of Dermatologic Oncology, Osaka International Cancer Institute, Osaka, Japan
| | - S Matsushita
- Department of Dermato-Oncology/Dermatology, National Hospital Organization Kagoshima Medical Center, Kagoshima, Japan
| | - M Nomura
- Department of Clinical Oncology, Kyoto University, Kyoto, Japan
| | - Y Nakai
- Department of Dermatology, Mie University, Tsu, Japan
| | - S Fukushima
- Department of Dermatology and Plastic Surgery, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan
| | - S Saito
- Department of Dermatology, Gunma University, Maebashi, Japan
| | - T Takenouchi
- Department of Dermatology, Niigata Cancer Center, Niigata, Japan
| | - R Tanaka
- Department of Dermatology, Kawasaki Medical School, Kurashiki, Japan
| | - H Kato
- Department of Geriatric and Environmental Dermatology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan
| | - A Otsuka
- Department of Dermatology, Kyoto University, Kyoto, Japan
| | - T Matsuya
- Department of Dermatology, Asahikawa Medical University, Asahikawa, Japan
| | - N Baba
- Department of Dermatology, Fukui University, Fukui, Japan
| | - K Nagase
- Division of Dermatology, Department of Internal Medicine, Saga University, Saga, Japan
| | - T Inozume
- Department of Dermatology, Chiba University, Chiba, Japan
| | - N Fujimoto
- Department of Dermatology, Shiga University of Medical Science, Otsu, Japan
| | - Y Kuwatsuka
- Department of Dermatology, Nagasaki University, Nagasaki, Japan
| | - M Onishi
- Department of Dermatology, Iwate Medical University, Morioka, Japan
| | - T Kaneko
- Department of Dermatology, Juntendo University Urayasu Hospital, Urayasu, Japan
| | - T Onuma
- Department of Dermatology, Yamanashi University, Kofu, Japan
| | - Y Umeda
- Department of Skin Oncology/Dermatology, Saitama Medical University International Medical Center, Saitama, Japan; Department of Dermatology, Kawasaki Medical School, Kurashiki, Japan
| | - D Ogata
- Department of Dermatologic Oncology, National Cancer Center Hospital, Tokyo, Japan
| | - A Takahashi
- Department of Dermatologic Oncology, National Cancer Center Hospital, Tokyo, Japan
| | - M Otsuka
- Department of Dermatology, Shizuoka Cancer Center, Shizuoka, Japan
| | - Y Teramoto
- Department of Skin Oncology/Dermatology, Saitama Medical University International Medical Center, Saitama, Japan
| | - N Yamazaki
- Department of Dermatologic Oncology, National Cancer Center Hospital, Tokyo, Japan
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15
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Ohira T, Ino Y, Kimura Y, Nakai Y, Kimura A, Kurata Y, Kagawa H, Kimura M, Egashira K, Matsuda C, Ohira Y, Furukawa S, Hirano H. Effects of microgravity exposure and fructo-oligosaccharide ingestion on the proteome of soleus and extensor digitorum longus muscles in developing mice. NPJ Microgravity 2021; 7:34. [PMID: 34535681 PMCID: PMC8448765 DOI: 10.1038/s41526-021-00164-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2020] [Accepted: 08/26/2021] [Indexed: 12/22/2022] Open
Abstract
Short-chain fatty acids produced by the gut bacterial fermentation of non-digestible carbohydrates, e.g., fructo-oligosaccharide (FOS), contribute to the maintenance of skeletal muscle mass and oxidative metabolic capacity. We evaluated the effect of FOS ingestion on protein expression of soleus (Sol) and extensor digitorum longus muscles in mice exposed to microgravity (μ-g). Twelve 9-week-old male C57BL/6J mice were raised individually on the International Space Station under μ-g or artificial 1-g and fed a diet with or without FOS (n = 3/group). Regardless of FOS ingestion, the absolute wet weights of both muscles tended to decrease, and the fiber phenotype in Sol muscles shifted toward fast-twitch type following μ-g exposure. However, FOS ingestion tended to mitigate the μ-g-exposure-related decrease in oxidative metabolism and enhance glutathione redox detoxification in Sol muscles. These results indicate that FOS ingestion mildly suppresses metabolic changes and oxidative stress in antigravity Sol muscles during spaceflight.
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Affiliation(s)
- Takashi Ohira
- Research Center for Space and Medical Sciences and Organization for Research Initiatives and Development, Doshisha University, Kyoto, Japan. .,Department of Physiology and Regenerative Medicine, Kindai University Faculty of Medicine, 377-2 Ohno-Higashi Osaka-Sayama, Osaka, Japan. .,Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan. .,Space Biomedical Research Group, Japan Aerospace Exploration Agency, Ibaraki, Japan.
| | - Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Ayuko Kimura
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Yoichi Kurata
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Hiroyuki Kagawa
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Mitsuo Kimura
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Kenji Egashira
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Chie Matsuda
- Space Biomedical Research Group, Japan Aerospace Exploration Agency, Ibaraki, Japan
| | - Yoshinobu Ohira
- Research Center for Space and Medical Sciences and Organization for Research Initiatives and Development, Doshisha University, Kyoto, Japan
| | - Satoshi Furukawa
- Space Biomedical Research Group, Japan Aerospace Exploration Agency, Ibaraki, Japan
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
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Tanaka N, Nakai Y, Asakawa I, Miyake M, Anai S, Hasegawa M, Fujimoto K. The oncologic outcomes of low-dose-rate brachytherapy for prostate cancer. EUR UROL SUPPL 2020. [DOI: 10.1016/s2666-1683(20)33523-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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17
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Miyake M, Marugami N, Hori S, Nishimura N, Owari T, Itami Y, Nakai Y, Tanaka N, Fujimoto K. Dynamic contrast-enhanced magnetic resonance imaging can improve diagnostic accuracy of detecting bladder carcinoma in situ in combination with photodynamic diagnosis? EUR UROL SUPPL 2020. [DOI: 10.1016/s2666-1683(20)33497-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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18
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Miyake M, Marugami N, Fujiwara Y, Komura K, Inamoto T, Azuma H, Matsumoto H, Matsuyama H, Nishimura N, Hori S, Owari T, Itami Y, Nakai Y, Fujimoto K. Down-grading of ipsilateral hydronephrosis by neoadjuvant chemotherapy is associated with better oncological outcomes after radical nephroureterectomy in patients with ureteral cancer. EUR UROL SUPPL 2020. [DOI: 10.1016/s2666-1683(20)34094-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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19
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Ohira T, Ino Y, Nakai Y, Morita H, Kimura A, Kurata Y, Kagawa H, Kimura M, Egashira K, Moriya S, Hiramatsu K, Kawakita M, Kimura Y, Hirano H. Proteomic analysis revealed different responses to hypergravity of soleus and extensor digitorum longus muscles in mice. J Proteomics 2020; 217:103686. [PMID: 32061808 DOI: 10.1016/j.jprot.2020.103686] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Revised: 01/30/2020] [Accepted: 02/12/2020] [Indexed: 01/01/2023]
Abstract
Investigating protein abundance profiles is important to understand the differences in the slow and fast skeletal muscle characteristics. The profiles in soleus (Sol) and extensor digitorum longus (EDL) muscles in mice exposed to 1 g or 3 g for 28 d were compared. The biological implications of the profiles revealed that hypergravity exposure activated a larger number of pathways involved in protein synthesis in Sol. In contrast, the inactivation of signalling pathways involved in oxidative phosphorylation were conspicuous in EDL. These results suggested that the reactivity of molecular pathways in Sol and EDL differed. Additionally, the levels of spermidine synthase and spermidine, an important polyamine for cell growth, increased in both muscles following hypergravity exposure, whereas the level of spermine oxidase (SMOX) increased in EDL alone. The SMOX level was negatively correlated with spermine content, which is involved in muscle atrophy, and was higher in EDL than Sol, even in the 1 g group. These results indicated that the contribution of SMOX to the regulation of spermidine and spermine contents in Sol and EDL differed. However, contrary to expectations, the difference in the SMOX level did not have a significant impact on the growth of these muscles following hypergravity exposure. SIGNIFICANCE: The skeletal muscle-specific protein abundance profiles result in differences in the characteristics of slow and fast skeletal muscles. We investigated differences in the profiles in mouse slow-twitch Sol and fast-twitch EDL muscles following 28-d of 1 g and 3 g exposure by LC-MS/MS analysis and label-free quantitation. A two-step solubilisation of the skeletal muscle proteins increased the coverage of proteins identified by LC-MS/MS analysis. Additionally, this method reduced the complexity of samples more easily than protein or peptide fractionation by SDS-PAGE and offline HPLC while maintaining the high operability of samples and was reproducible. A larger number of hypergravity-responsive proteins as well as a prominent increase in the wet weights was observed in Sol than EDL muscles. The biological implications of the difference in the protein abundance profiles in 1 g and 3 g groups revealed that the reactivity of each molecular pathway in Sol and EDL muscles to hypergravity exposure differed significantly. In addition, we found that the biosynthetic and interconversion pathway of polyamines, essential factors for cell growth and survival in mammals, was responsive to hypergravity exposure; spermidine and spermine contents in Sol and EDL muscles were regulated by different mechanisms even in the 1 g group. However, our results indicated that the difference in the mechanism regulating polyamine contents is unlikely to have a significant effect on the differences in Sol and EDL muscle growth following hypergravity exposure.
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Affiliation(s)
- Takashi Ohira
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Yoko Ino
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Yusuke Nakai
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Hironobu Morita
- Department of Physiology, Gifu University Graduate School of Medicine, Gifu, Japan
| | - Ayuko Kimura
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Yoichi Kurata
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Hiroyuki Kagawa
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Mitsuo Kimura
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Kenji Egashira
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan
| | - Shunsuke Moriya
- Department of Advanced Research for Biomolecules, Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan
| | - Kyoko Hiramatsu
- Department of Advanced Research for Biomolecules, Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan
| | - Masao Kawakita
- Department of Advanced Research for Biomolecules, Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan
| | - Yayoi Kimura
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan.
| | - Hisashi Hirano
- Advanced Medical Research Center, Yokohama City University, Kanagawa, Japan.
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20
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Matsuo I, Shimizu T, Nakai Y, Kakimoto M, Sawasaki Y, Mori Y, Sugano T, Ikemoto S, Miyamoto T. Q-bot: heavy object carriage robot for in-house logistics based on universal vacuum gripper. Adv Robot 2020. [DOI: 10.1080/01691864.2019.1709987] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Isamu Matsuo
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
| | - Toshihiko Shimizu
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
| | - Yusuke Nakai
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
| | - Masahiro Kakimoto
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
| | - Yuki Sawasaki
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
| | - Yoshiki Mori
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
| | - Takamasa Sugano
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
| | - Shuhei Ikemoto
- School of Engineering, Osaka University, Toyonaka, Osaka, Japan
| | - Takeshi Miyamoto
- Department of Mechanical Engineering, Kobe City College of Technology, Nishi-ku, Kobe, Japan
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21
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Sakai R, Katsumata S, Miki T, Yano T, Wei W, Okadome Y, Chihara N, Kimura N, Nakai Y, Matsuo I, Shimizu T. A mobile dual-arm manipulation robot system for stocking and disposing of items in a convenience store by using universal vacuum grippers for grasping items. Adv Robot 2019. [DOI: 10.1080/01691864.2019.1705909] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Ryo Sakai
- Intelligent Information Research, Hitachi, Ltd. Research and Development Group, Tokyo, Japan
| | - Shinichi Katsumata
- Intelligent Information Research, Hitachi, Ltd. Research and Development Group, Tokyo, Japan
| | - Takahiro Miki
- Department of Mechanical and Process Engineering, ETH Zürich, Zürich, Switzerland
| | - Taiki Yano
- Intelligent Information Research, Hitachi, Ltd. Research and Development Group, Tokyo, Japan
| | - Wenpeng Wei
- Intelligent Information Research, Hitachi, Ltd. Research and Development Group, Tokyo, Japan
| | - Yuya Okadome
- Intelligent Information Research, Hitachi, Ltd. Research and Development Group, Tokyo, Japan
| | - Nobuhiro Chihara
- Intelligent Information Research, Hitachi, Ltd. Research and Development Group, Tokyo, Japan
| | - Nobutaka Kimura
- Intelligent Information Research, Hitachi, Ltd. Research and Development Group, Tokyo, Japan
| | - Yusuke Nakai
- Mechanical Engineering, Kobe City College of Technology, Kobe, Japan
| | - Isamu Matsuo
- Mechanical Engineering, Kobe City College of Technology, Kobe, Japan
| | - Toshihiko Shimizu
- Mechanical Engineering, Kobe City College of Technology, Kobe, Japan
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22
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Matsuno T, Nakai Y, Maniwa Y, Someya M, Sato S, Isobe H. Regulated Single‐Axis Rotations of a Carbonaceous Guest in a van der Waals Complex with an Entropy Cost. Chem Asian J 2019; 15:273-278. [DOI: 10.1002/asia.201901638] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Indexed: 11/12/2022]
Affiliation(s)
- Taisuke Matsuno
- Department of Chemistry The University of Tokyo Hongo Bunkyo-ku Tokyo 113-0033 Japan
- JST ERATO, Isobe Degenerate π-Integration Project Hongo Bunkyo-ku Tokyo 113-0033 Japan
| | - Yusuke Nakai
- Graduate School of Material Science University of Hyogo Ako-gun Hyogo 678-1297 Japan
| | - Yutaka Maniwa
- Department of Physics Tokyo Metropolitan University Hachioji Tokyo 192-0397 Japan
| | - Maki Someya
- Department of Chemistry The University of Tokyo Hongo Bunkyo-ku Tokyo 113-0033 Japan
| | - Sota Sato
- Department of Chemistry The University of Tokyo Hongo Bunkyo-ku Tokyo 113-0033 Japan
- JST ERATO, Isobe Degenerate π-Integration Project Hongo Bunkyo-ku Tokyo 113-0033 Japan
| | - Hiroyuki Isobe
- Department of Chemistry The University of Tokyo Hongo Bunkyo-ku Tokyo 113-0033 Japan
- JST ERATO, Isobe Degenerate π-Integration Project Hongo Bunkyo-ku Tokyo 113-0033 Japan
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23
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Okano N, Ueno M, Morizane C, Yamanaka T, Ojima H, Ozaka M, Sasaki M, Takahara N, Kobayashi S, Morimoto M, Hosoi H, Nakai Y, Ikeda M, Maeno S, Nagashima F, Okusaka T, Furuse J. Multicenter phase II trial of axitinib monotherapy for advanced biliary tract cancer refractory to gemcitabine-based chemotherapy. Ann Oncol 2019. [DOI: 10.1093/annonc/mdz247.064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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24
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Ikeda M, Maruki Y, Ueno M, Ioka T, Naganuma A, Furukawa M, Mizuno N, Uwagawa T, Nakai Y, Kanai M, Asagi A, Shimizu S, Miyamoto A, Yukisawa S, Kadokura M, Yamanaka T, Arai Y, Shibata T, Morizane C, Okusaka T. Frequency and clinicopathological characteristics of biliary tract carcinomas harboring the FGFR2-fusion gene: A prospective observational study (PRELUDE study). Ann Oncol 2019. [DOI: 10.1093/annonc/mdz247.050] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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25
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Saito K, Nakai Y, Ushiku T, Saito T, Takahara N, Mizuno S, Kogure H, Koike K. Gastrointestinal: Successful diagnosis of primary peritoneal serous carcinoma by endoscopic ultrasound-guided through-the-needle forceps biopsy. J Gastroenterol Hepatol 2019; 34:1271. [PMID: 30693562 DOI: 10.1111/jgh.14593] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Revised: 11/22/2018] [Accepted: 12/28/2018] [Indexed: 12/09/2022]
Affiliation(s)
- K Saito
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
| | - Y Nakai
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
| | - T Ushiku
- Department of Pathology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
| | - T Saito
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
| | - N Takahara
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
| | - S Mizuno
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
| | - H Kogure
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
| | - K Koike
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
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26
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Mizuno S, Nakai Y, Tanaka M, Ushiku T, Arita J, Hasegawa K, Fukayama M, Koike K. Gastrointestinal: Reappraisal of the usefulness of percutaneous transhepatic cholangioscopy for indeterminate distal biliary strictures. J Gastroenterol Hepatol 2019; 34:961. [PMID: 30669178 DOI: 10.1111/jgh.14588] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/12/2018] [Accepted: 12/28/2018] [Indexed: 12/12/2022]
Affiliation(s)
- S Mizuno
- Department of Gastroenterology, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
| | - Y Nakai
- Department of Gastroenterology, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
| | - M Tanaka
- Department of Pathology and Diagnostic Pathology, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
| | - T Ushiku
- Department of Pathology and Diagnostic Pathology, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
| | - J Arita
- Department of Hepatobiliary and Pancreatic Surgery, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
| | - K Hasegawa
- Department of Hepatobiliary and Pancreatic Surgery, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
| | - M Fukayama
- Department of Pathology and Diagnostic Pathology, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
| | - K Koike
- Department of Gastroenterology, Graduate School of Medicine, University of Tokyo, Tokyo, Japan
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27
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Murata M, Nakai Y, Kawazu K, Ishizaka M, Kajiwara H, Abe H, Takeuchi K, Ichinose Y, Mitsuhara I, Mochizuki A, Seo S. Loliolide, a Carotenoid Metabolite, Is a Potential Endogenous Inducer of Herbivore Resistance. Plant Physiol 2019; 179:1822-1833. [PMID: 30700538 PMCID: PMC6446782 DOI: 10.1104/pp.18.00837] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2018] [Accepted: 01/18/2019] [Indexed: 05/12/2023]
Abstract
Jasmonic acid (JA) plays an important role in the induction of herbivore resistance in many plants. However, JA-independent herbivore resistance has been suggested. An herbivore-resistance-inducing substance was isolated from Tobacco mosaic virus-infected tobacco (Nicotiana tabacum) leaves in which a hypersensitive response (HR) was induced and identified as loliolide, which has been identified as a β-carotene metabolite. When applied to tomato (Solanum lycopersicum) leaves, loliolide decreased the survival rate of the two-spotted spider mite, Tetranychus urticae, egg deposition by the same pest, and the survival rate of larvae of the common cutworm Spodoptera litura without exhibiting toxicity against these herbivores. Endogenous loliolide levels increased not only with an infestation by S litura larvae, but also with the exogenous application of their oral secretions in tomato. A microarray analysis identified cell-wall-associated defense genes as loliolide-responsive tomato genes, and exogenous JA application did not induce the expression of these genes. Suppressor of zeaxanthin-less (szl), an Arabidopsis (Arabidopsis thaliana) mutant with a point mutation in a key gene of the β-carotene metabolic pathway, exhibited the decreased accumulation of endogenous loliolide and increased susceptibility to infestation by the western flower thrip (Frankliniella occidentalis). A pretreatment with loliolide decreased susceptibility to thrips in the JA-insensitive Arabidopsis mutant coronatine-insensitive1 Exogenous loliolide did not restore reduced electrolyte leakage in szl in response to a HR-inducing bacterial strain. These results suggest that loliolide functions as an endogenous signal that mediates defense responses to herbivores, possibly independently of JA, at least in tomato and Arabidopsis plants.
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Affiliation(s)
- Mika Murata
- National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
- Institute of Vegetable and Floriculture Science, National Agriculture and Food Research Organization, Tsu, Mie, 514-2392, Japan
| | - Yusuke Nakai
- National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
- Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, Kurume, Fukuoka 839-8503, Japan
| | - Kei Kawazu
- National Institute for Agro-Environmental Sciences, Tsukuba, Ibaraki 305-8604, Japan
| | - Masumi Ishizaka
- Advanced Analysis Center, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8604, Japan
| | - Hideyuki Kajiwara
- Advanced Analysis Center, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8604, Japan
| | - Hiroshi Abe
- Experimantal Plant Division, RIKEN BioResource Research Center, Tsukuba, Ibaraki 305-0074, Japan
| | - Kasumi Takeuchi
- Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8602, Japan
| | - Yuki Ichinose
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Okayama 700-8530, Japan
| | - Ichiro Mitsuhara
- National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Okayama 700-8530, Japan
| | - Atsushi Mochizuki
- National Institute for Agro-Environmental Sciences, Tsukuba, Ibaraki 305-8604, Japan
| | - Shigemi Seo
- National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
- Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8602, Japan
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28
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Nakai Y, Tanaka N, Asakawa I, Miyake M, Anai S, Morizawa Y, Owari T, Fujii T, Hasegawa M, Fujimoto K. Assessment of the Prostate-Specific Antigen Bounce in Patients Treated with 12⁵I-Brachytherapy for Prostate Cancer and Its Correlation with Testosterone. Int J Radiat Oncol Biol Phys 2018. [DOI: 10.1016/j.ijrobp.2018.07.250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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29
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Saito K, Nakai Y, Isayama H, Ishigaki K, Saito T, Takahara N, Mizuno S, Kogure H, Koike K. A phase II trial of gemcitabine, S-1 and LV combination therapy in patients with advanced pancreatic cancer. Ann Oncol 2018. [DOI: 10.1093/annonc/mdy282.120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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30
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Takahara N, Nakai Y, Saito K, Sato M, Ooyama H, Kanai S, Suzuki T, Sato T, Hakuta R, Ishigaki K, Takeda T, Mizuno S, Kogure H, Tada M, Koike K. Nomograms predicting survival of patients with advanced or recurrent biliary tract cancer receiving a first-line chemotherapy. Ann Oncol 2018. [DOI: 10.1093/annonc/mdy282.151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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31
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Kyakuno H, Matsuda K, Nakai Y, Ichimura R, Saito T, Miyata Y, Hata K, Maniwa Y. Rotational dynamics and dynamical transition of water inside hydrophobic pores of carbon nanotubes. Sci Rep 2017; 7:14834. [PMID: 29093483 PMCID: PMC5666012 DOI: 10.1038/s41598-017-13704-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Accepted: 09/29/2017] [Indexed: 11/10/2022] Open
Abstract
Water in a nanoconfined geometry has attracted great interest from the viewpoint of not only basic science but also nanofluidic applications. Here, the rotational dynamics of water inside single-walled carbon nanotubes (SWCNTs) with mean diameters larger than ca. 1.4 nm were investigated systematically using 2H nuclear magnetic resonance spectroscopy with high-purity SWCNTs and molecular dynamics calculations. The results were compared with those for hydrophilic pores. It was found that faster water dynamics could be achieved by increasing the hydrophobicity of the pore walls and decreasing the pore diameters. These results suggest a strategy that paves the way for emerging high-performance filtration/separation devices. Upon cooling below 220 K, it was found that water undergoes a transition from fast to slow dynamics states. These results strongly suggest that the observed transition is linked to a liquid-liquid crossover or transition proposed in a two-liquid states scenario for bulk water.
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Affiliation(s)
- Haruka Kyakuno
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji, 192-0397, Japan. .,Institute of Physics, Faculty of Engineering, Kanagawa University, Yokohama, 221-8686, Japan.
| | - Kazuyuki Matsuda
- Institute of Physics, Faculty of Engineering, Kanagawa University, Yokohama, 221-8686, Japan
| | - Yusuke Nakai
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji, 192-0397, Japan
| | - Ryota Ichimura
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji, 192-0397, Japan
| | - Takeshi Saito
- Nanomaterials Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba, 305-8565, Japan
| | - Yasumitsu Miyata
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji, 192-0397, Japan.,JST, CREST, Kawaguchi, 332-0012, Japan
| | - Kenji Hata
- CNT-application Research Center, National Institute of Advanced Industrial Science and Technology, Tsukuba, 305-8565, Japan
| | - Yutaka Maniwa
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji, 192-0397, Japan.
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32
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Akizuki M, Nakai Y, Fujii T, Oshima Y. Kinetic Analysis of a Solid Base-Catalyzed Reaction in Sub- and Supercritical Water Using Aldol Condensation with Mg(OH)2 as a Model. Ind Eng Chem Res 2017. [DOI: 10.1021/acs.iecr.7b03283] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Makoto Akizuki
- Department
of Environment Systems, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8563, Japan
| | - Yusuke Nakai
- Department
of Environment Systems, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8563, Japan
| | - Tatsuya Fujii
- Research
Institute for Chemical Process Technology, National Institute of Advanced Industrial Science and Technology (AIST), 4-2-1 Nigatake, Miyagino-ku, Sendai, Miyagi 983-8551, Japan
| | - Yoshito Oshima
- Department
of Environment Systems, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8563, Japan
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Kiguchi T, Sato C, Takai K, Nakai Y, Kaneko Y, Matsuki M. CT findings in 11 patients with TAFRO syndrome: a variant of multicentric Castleman's disease. Clin Radiol 2017. [DOI: 10.1016/j.crad.2017.05.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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34
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Yamaguchi K, Fukami Y, Nakai Y, Hiroaki O, Kanai M. Safety and feasibility of hybrid assistive limb therapy for acute stroke: Protocol for a pilot study. J Neurol Sci 2017. [DOI: 10.1016/j.jns.2017.08.2361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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35
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Tanaka N, Asakawa I, Nakai Y, Miyake M, Anai S, Hasegawa M, Fujimoto K. The Hybrid Method Can Cover the External Prostatic Region Compared With the Conventional Method in Patients Who Undergo Prostate Low-Dose-Rate Brachytherapy. Int J Radiat Oncol Biol Phys 2017. [DOI: 10.1016/j.ijrobp.2017.06.514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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36
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Nakai Y, Tanaka N, Asakawa I, Hasegawa M, Fujimoto K. Quality of Life in Patients Who Underwent Intensity-Modulated Radiation Therapy, 125 I Brachytherapy, and Combined 125 I Brachytherapy Plus Three-Dimensional Conformal Radiation Therapy for Prostate Cancer. Int J Radiat Oncol Biol Phys 2017. [DOI: 10.1016/j.ijrobp.2017.06.1216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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37
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Fujita K, Nakai Y, Kawashima A, Ujike T, Nagahara A, Nakajima T, Inoue T, Lee CM, Uemura M, Miyagawa Y, Kaneda Y, Nonomura N. Phase I/II clinical trial to assess safety and efficacy of intratumoral and subcutaneous injection of HVJ-E in castration-resistant prostate cancer patients. Cancer Gene Ther 2017; 24:277-281. [PMID: 28497777 PMCID: PMC5562845 DOI: 10.1038/cgt.2017.15] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2017] [Revised: 03/01/2017] [Accepted: 03/04/2017] [Indexed: 12/27/2022]
Abstract
Inactivated Sendai virus particles (hemagglutinating virus of Japan envelope (HVJ-E)) have a novel antitumor effect: HVJ-E fused to prostate cancer cells via cell surface receptor causes apoptosis of prostate cancer cells in vitro and in vivo. HVJ-E also induces antitumor immunity by activating natural killer (NK) cells and cytotoxic T cells and suppressing regulatory T cells in vivo. We conducted an open-label, single-arm, phase I/II clinical trial in patients with castration-resistant prostate cancer (CRPC) to determine the safety and efficacy of intratumoral and subcutaneous injection of HVJ-E. Patients with CRPC who were docetaxel-resistant or could not receive docetaxel treatment were eligible. HVJ-E was injected directly into the prostate on day 1 and subcutaneously on days 5, 8 and 12 in two 28-day treatment cycles using a 3+3 dose-escalation design. The primary end points were to evaluate safety and tolerability of HVJ-E. The secondary end points were to analyze tumor immunity and antitumor effect. The study is registered at UMIN Clinical Trials Registry, number UMIN000006142. Seven patients were enrolled, and six patients received HVJ-E. Grade 2 or 3 adverse events (Common Terminology Criteria for Adverse Events Ver. 4.0) were urinary retention and lymphopenia from which the patients recovered spontaneously. No Grade 4 adverse events were observed. Radiographically, three patients had stable disease in the low-dose group, and one patient had stable disease and two had progressive disease in the high-dose group. The prostate-specific antigen (PSA) declined from 14 to 1.9 ng ml-1 in one patient in the low-dose group after two cycles of HVJ-E treatment, and the PSA response rate was 16.6%. NK cell activity was elevated from day 12 to day 28 after HVJ-E administration, whereas serum interleukin-6, interferon (IFN)-α, IFN-β and IFN-γ levels were not affected by HVJ-E treatment. Intratumoral and subcutaneous injections of HVJ-E are feasible and PSA response was observed in a subgroup of CRPC patients.
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Affiliation(s)
- K Fujita
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
| | - Y Nakai
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
| | - A Kawashima
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
| | - T Ujike
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
| | - A Nagahara
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
| | | | - T Inoue
- Department of Medical Innovation, Osaka University Graduate School of Medicine, Suita, Japan
| | - C M Lee
- Department of Medical Innovation, Osaka University Graduate School of Medicine, Suita, Japan
| | - M Uemura
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
| | - Y Miyagawa
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
| | - Y Kaneda
- Division of Gene Therapy Science, Osaka University Graduate School of Medicine, Suita, Japan
| | - N Nonomura
- Department of Urology, Osaka University Graduate School of Medicine, Suita, Japan
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Kyakuno H, Fukasawa M, Ichimura R, Matsuda K, Nakai Y, Miyata Y, Saito T, Maniwa Y. Diameter-dependent hydrophobicity in carbon nanotubes. J Chem Phys 2016. [DOI: 10.1063/1.4960609] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Affiliation(s)
- Haruka Kyakuno
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji 192-0397, Japan
- Institute of Physics, Faculty of Engineering, Kanagawa University, Yokohama 221-8686, Japan
| | - Mamoru Fukasawa
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji 192-0397, Japan
| | - Ryota Ichimura
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji 192-0397, Japan
| | - Kazuyuki Matsuda
- Institute of Physics, Faculty of Engineering, Kanagawa University, Yokohama 221-8686, Japan
| | - Yusuke Nakai
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji 192-0397, Japan
| | - Yasumitsu Miyata
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji 192-0397, Japan
- PRESTO, JST, Kawaguchi 332-0012, Japan
| | - Takeshi Saito
- Nanotube Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba 305-8565, Japan
| | - Yutaka Maniwa
- Department of Physics, Graduate School of Science and Engineering, Tokyo Metropolitan University, Hachioji 192-0397, Japan
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Masuno K, Yanai T, Hirata A, Yonemaru K, Sakai H, Satoh M, Masegi T, Nakai Y. Morphological and Immunohistochemical Features of Cryptosporidium andersoni in Cattle. Vet Pathol 2016; 43:202-7. [PMID: 16537941 DOI: 10.1354/vp.43-2-202] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Light and electron microscopic features and immunohistochemical features of Cryptosporidium andersoni ( C. andersoni) and host reaction in the mucosa were studied. Although the affected cattle demonstrated no apparent clinical signs, a severe infection of C. andersoni was observed in the abomasum. C. andersoni were round in shape, measured 6-8 μm in size and were mainly observed to be freely located in the gastric pits, being attached in occasional cases to the surface of the abomasum epithelium. Frequent inflammatory cells had infiltrated the lamina propria of the affected mucosa, and frequent mitotic figures were observed in epithelial cells at the dilated isthmus. To access the cell kinetics, the number of epithelial cells infected with C. andersoni were counted and compared with noninfected cattle. The number of gastric pit cells in infected cattle was significantly higher than that in the controls. The number of proliferative cells determined by the Ki-67 antigen in C. andersoni infected cattle was also significantly higher than that in the controls. Transmission electron microscopy and scanning electron microscopy revealed that the morphology of the C. andersoni organism was common to those of other Cryptosporidium spp. immunohistochemically, several commercial antibodies against Cryptosporidium spp. showed positive reactions at the wall of these oocysts or parasitophorous vacuoles. This report is possibly the first to discuss the prominent hyperplasia of the abomasum mucosa, as well as morphologic features of C. andersoni in cattle.
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Affiliation(s)
- K Masuno
- Department of Veterinary Pathology, Faculty of Agriculture, Gifu University 1-1 Yanagido, Gifu 501-1193, Japan
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Ohbayashi Y, Nakai F, Iwasaki A, Nakai Y, Httori Y, Yamamoto, Nishiyama Y, Miyake M. The predictability of bisphosphonate-related osteonecrosis of the jaw using a quantitative analysis of bone scintigraphy. Int J Oral Maxillofac Surg 2015. [DOI: 10.1016/j.ijom.2015.08.264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Affiliation(s)
- H Yamane
- Department of Otolaryngology, Osaka City University Medical School, Japan
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42
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Imura H, Kato Y, Nakai Y. Endocrine aspects of tumors arising from suprasellar, third ventricular regions. Prog Exp Tumor Res 2015; 30:313-24. [PMID: 3628813 DOI: 10.1159/000413689] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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43
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Kong Q, Nakai Y, Kuroda N, Shiratsuchi A, Nagaosa K, Nakanishi Y. Peptidoglycan recognition protein-triggered induction of Escherichia coli gene in Drosophila melanogaster. J Biochem 2015; 157:507-17. [DOI: 10.1093/jb/mvv002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 01/07/2015] [Indexed: 11/14/2022] Open
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Ichikawa M, Nakai Y, Arima K, Nishiyama S, Hirano T, Sato MH. A VAMP-associated protein, PVA31 is involved in leaf senescence in Arabidopsis. Plant Signal Behav 2015; 10:e990847. [PMID: 25897470 PMCID: PMC4622063 DOI: 10.4161/15592324.2014.990847] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2014] [Revised: 10/14/2014] [Accepted: 10/15/2014] [Indexed: 05/26/2023]
Abstract
VAMP-associated proteins (VAPs) are highly conserved among eukaryotes. Here, we report a functional analysis of one of the VAPs, PVA31, and demonstrate its novel function on leaf senescence in Arabidopsis. The expression of PVA31 is highly induced in senescence leaves, and localizes to the plasma membrane as well as the ARA7-positive endosomes. Yeast two-hybrid analysis demonstrates that PVA31 is interacted with the plasma membrane localized-VAMP proteins, VAMP721/722/724 but not with the endosome-localized VAMPs, VAMP711 and VAMP727, indicating that PVA31 is associated with VAMP721/722/724 on the plasma membrane. Strong constitutive expression of PVA31 under the control of the Cauliflower mosaic virus 35S promoter induces the typical symptom of leaf senescence earlier than WT in normal growth and an artificially induced senescence conditions. In addition, the marker genes for the SA-mediated signaling pathways, PR-1, is promptly expressed with elicitor application. These data indicate that PVA31-overexpressing plants exhibit the early senescence phenotype in their leaves, and suggest that PVA31 is involved in the SA-mediated programmed cell death process during leaf senescence and PR-protein secretion during pathogen infection in Arabidopsis.
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Affiliation(s)
- Mie Ichikawa
- Graduate School of Life and Environmental Sciences; Kyoto Prefectural University; Kyoto, Japan
| | - Yusuke Nakai
- Graduate School of Life and Environmental Sciences; Kyoto Prefectural University; Kyoto, Japan
- Current affiliation: Research Institute of Genome-based Biofactory; AIST; Tsukuba, Japan
| | - Keita Arima
- Graduate School of Life and Environmental Sciences; Kyoto Prefectural University; Kyoto, Japan
| | - Sayo Nishiyama
- Graduate School of Life and Environmental Sciences; Kyoto Prefectural University; Kyoto, Japan
| | - Tomoko Hirano
- Graduate School of Life and Environmental Sciences; Kyoto Prefectural University; Kyoto, Japan
| | - Masa H Sato
- Graduate School of Life and Environmental Sciences; Kyoto Prefectural University; Kyoto, Japan
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Tahara H, Naito H, Kise K, Wakabayashi T, Kamoi K, Okihara K, Yanagisawa A, Nakai Y, Nonomura N, Morii E, Miki T, Takakura N. Evaluation of PSF1 as a prognostic biomarker for prostate cancer. Prostate Cancer Prostatic Dis 2014; 18:56-62. [DOI: 10.1038/pcan.2014.46] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2014] [Revised: 09/18/2014] [Accepted: 10/02/2014] [Indexed: 11/09/2022]
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46
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Yanagi K, Kanda S, Oshima Y, Kitamura Y, Kawai H, Yamamoto T, Takenobu T, Nakai Y, Maniwa Y. Tuning of the thermoelectric properties of one-dimensional material networks by electric double layer techniques using ionic liquids. Nano Lett 2014; 14:6437-6442. [PMID: 25302572 DOI: 10.1021/nl502982f] [Citation(s) in RCA: 54] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
We report across-bandgap p-type and n-type control over the Seebeck coefficients of semiconducting single-wall carbon nanotube networks through an electric double layer transistor setup using an ionic liquid as the electrolyte. All-around gating characteristics by electric double layer formation upon the surface of the nanotubes enabled the tuning of the Seebeck coefficient of the nanotube networks by the shift in gate voltage, which opened the path to Fermi-level-controlled three-dimensional thermoelectric devices composed of one-dimensional nanomaterials.
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Affiliation(s)
- Kazuhiro Yanagi
- Department of Physics, Tokyo Metropolitan University , Tokyo 192-0397, Japan
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Yoshida T, Ogawa T, Taguchi N, Maeda J, Abe K, Rodis OM, Nakai Y, Shirai H, Torii Y, Konoo T, Suzuki K. Effectiveness of a simulated patient training programme based on trainee response accuracy and appropriateness of feedback. Eur J Dent Educ 2014; 18:241-251. [PMID: 25318559 DOI: 10.1111/eje.12093] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 12/28/2013] [Indexed: 06/04/2023]
Abstract
INTRODUCTION Simulated patients (SPs) need education and training in required skills to be effective resources in education. This study was conducted to examine the effectiveness of an SP training programme based on the accuracy of trainee responses and the appropriateness of their feedback. METHODS Thirty-two applicants to the training programme and 35 experienced SPs were included in this study. The experienced SPs served as a reference group. The rate of accurate responses and the rate of appropriate feedback were assessed with pre- and post-training tests, and these two outcome measures were compared with those of the experienced SPs. RESULTS No significant differences were found in trainee response accuracy or appropriateness of feedback between pre- and post-training tests. The response accuracy rate of the trainees on the pre-training test was significantly lower than that of SPs with 1-2 years of experience, whilst there was no significant difference between these SPs and the trainees on the post-training test. CONCLUSIONS Although our study suggests that more training is needed to improve the skills of SPs, the training programme may contribute to helping trainees reach a novice level in the skill of providing accurate responses. SP training should be encouraged to contribute to the effectiveness of such teaching and to establish the validity of the assessment.
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Affiliation(s)
- T Yoshida
- Center for the Development of Medical and Healthcare Education (Dental Education), Okayama University, Okayama, Japan
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Hamada T, Nakai Y, Yasunaga H, Isayama H, Matsui H, Takahara N, Sasaki T, Takagi K, Watanabe T, Yagioka H, Kogure H, Arizumi T, Yamamoto N, Ito Y, Hirano K, Tsujino T, Tada M, Koike K. Prognostic nomogram for nonresectable pancreatic cancer treated with gemcitabine-based chemotherapy. Br J Cancer 2014; 110:1943-9. [PMID: 24642625 PMCID: PMC3992497 DOI: 10.1038/bjc.2014.131] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2013] [Revised: 02/14/2014] [Accepted: 02/20/2014] [Indexed: 12/26/2022] Open
Abstract
Background: A nomogram is progressively being used as a useful predictive tool for cancer prognosis. A nomogram to predict survival in nonresectable pancreatic cancer treated with chemotherapy has not been reported. Methods: Using prospectively collected data on patients with nonresectable pancreatic cancer receiving gemcitabine-based chemotherapy at five Japanese hospitals, we derived a predictive nomogram and internally validated it using a concordance index and calibration plots. Results: In total, 531 patients were included between June 2001 and February 2013. The American Joint Committee on Cancer (AJCC) TNM stages were III and IV in 204 and 327 patients, respectively. The median survival time of the total cohort was 11.3 months. A nomogram was generated to predict survival probabilities at 6, 12, and 18 months and median survival time, based on the following six variables: age; sex; performance status; tumour size; regional lymph node metastasis; and distant metastasis. The concordance index of the present nomogram was higher than that of the AJCC TNM staging system at 12 months (0.686 vs 0.612). The calibration plots demonstrated good fitness of the nomogram for survival prediction. Conclusions: The present nomogram can provide valuable information for tailored decision-making early after the diagnosis of nonresectable pancreatic cancer.
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Affiliation(s)
- T Hamada
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - Y Nakai
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - H Yasunaga
- Department of Health Economics and Epidemiology Research, School of Public Health, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - H Isayama
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - H Matsui
- Department of Health Economics and Epidemiology Research, School of Public Health, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - N Takahara
- Department of Gastroenterology, Kanto Central Hospital, 6-25-1 Kami-Yoga, Setagaya-ku, Tokyo 158-8531, Japan
| | - T Sasaki
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - K Takagi
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - T Watanabe
- Department of Gastroenterology, Kanto Central Hospital, 6-25-1 Kami-Yoga, Setagaya-ku, Tokyo 158-8531, Japan
| | - H Yagioka
- Department of Gastroenterology, JR Tokyo General Hospital, 2-1-3 Yoyogi, Shibuya-ku, Tokyo 151-8528, Japan
| | - H Kogure
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - T Arizumi
- Department of Gastroenterology, Mitsui Memorial Hospital, 1 Izumi-cho, Kanda, Chiyoda-ku, Tokyo 101-8643, Japan
| | - N Yamamoto
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - Y Ito
- Department of Gastroenterology, Japanese Red Cross Medical Center, Tokyo, 4-1-22 Hiroo, Shibuya-ku, Tokyo 150-8935, Japan
| | - K Hirano
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - T Tsujino
- Department of Gastroenterology, Japanese Red Cross Medical Center, Tokyo, 4-1-22 Hiroo, Shibuya-ku, Tokyo 150-8935, Japan
| | - M Tada
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - K Koike
- Department of Gastroenterology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
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Nishiuchi M, Sakaki H, Maeda S, Sagisaka A, Pirozhkov AS, Pikuz T, Faenov A, Ogura K, Kanasaki M, Matsukawa K, Kusumoto T, Tao A, Fukami T, Esirkepov T, Koga J, Kiriyama H, Okada H, Shimomura T, Tanoue M, Nakai Y, Fukuda Y, Sakai S, Tamura J, Nishio K, Sako H, Kando M, Yamauchi T, Watanabe Y, Bulanov SV, Kondo K. Multi-charged heavy ion acceleration from the ultra-intense short pulse laser system interacting with the metal target. Rev Sci Instrum 2014; 85:02B904. [PMID: 24593609 DOI: 10.1063/1.4827111] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Experimental demonstration of multi-charged heavy ion acceleration from the interaction between the ultra-intense short pulse laser system and the metal target is presented. Al ions are accelerated up to 12 MeV/u (324 MeV total energy). To our knowledge, this is far the highest energy ever reported for the case of acceleration of the heavy ions produced by the <10 J laser energy of 200 TW class Ti:sapphire laser system. Adding to that, thanks to the extraordinary high intensity laser field of ∼10(21) W cm(-2), the accelerated ions are almost fully stripped, having high charge to mass ratio (Q/M).
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Affiliation(s)
- M Nishiuchi
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - H Sakaki
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - S Maeda
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - A Sagisaka
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - A S Pirozhkov
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Pikuz
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - A Faenov
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - K Ogura
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - M Kanasaki
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - K Matsukawa
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Kusumoto
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - A Tao
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Fukami
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Esirkepov
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - J Koga
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - H Kiriyama
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - H Okada
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Shimomura
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - M Tanoue
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - Y Nakai
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - Y Fukuda
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - S Sakai
- Japan Atomic Energy Agency, Tokai, Ibaragi, Japan
| | - J Tamura
- J-PARC Center, Tokai, Ibaragi, Japan
| | - K Nishio
- Japan Atomic Energy Agency, Tokai, Ibaragi, Japan
| | - H Sako
- Japan Atomic Energy Agency, Tokai, Ibaragi, Japan
| | - M Kando
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Yamauchi
- Graduate School of Maritime Science, Kobe University, 5-1-1 Fukaeminami-machi, Higashinada-ku, Kobe 658-0022, Japan
| | - Y Watanabe
- Interdisciplinary Graduate School of Engineering Sciences, Kyushu University, Kasuga, Fukuoka, Japan
| | - S V Bulanov
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - K Kondo
- Kansai Photon Science Institute, Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
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50
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Sakaki H, Nishiuchi M, Maeda S, Sagisaka A, Pirozhkov AS, Pikuz T, Faenov A, Ogura K, Fukami T, Matsukawa K, Kanasaki M, Fukuda Y, Yogo A, Esirkepov T, Kiriyama H, Shimomura T, Nakai Y, Tanoue M, Torimoto K, Okamoto M, Sato T, Niita K, Tamura J, Nishio K, Sako H, Yamauchi T, Watanabe Y, Bulanov S, Kondo K. Measurements of electron-induced neutrons as a tool for determination of electron temperature of fast electrons in the task of optimization laser-produced plasma ions acceleration. Rev Sci Instrum 2014; 85:02A705. [PMID: 24593439 DOI: 10.1063/1.4825154] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
High intensity laser-plasma interaction has attracted considerable interest for a number of years. The laser-plasma interaction is accompanied by generation of various charged particle beams, such as high-energy proton and ions with high charge to mass ratio (Q/M; same as multi-charged ions). Results of simultaneous novel measurements of electron-induced photonuclear neutrons (photoneutron), which are a diagnostic of the laser-plasma interaction, are proposed to use for optimization of the laser-plasma ion generation. The proposed method is demonstrated by the laser irradiation with the intensity of 1 × 10(21) W/cm(2) on the metal foil target. The photoneutrons are measured by using NE213 liquid scintillation detectors. Heavy-ion signal is registered with the CR-39 track detector simultaneously. The measured signals of the electron-induced photoneutrons are well reproduced by using the Particle and Heavy Ion Transport code System. The results obtained provide useful approach for analyzing the various laser based ion beams.
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Affiliation(s)
- H Sakaki
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - M Nishiuchi
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - S Maeda
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - A Sagisaka
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | | | - T Pikuz
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - A Faenov
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - K Ogura
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Fukami
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - K Matsukawa
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - M Kanasaki
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - Y Fukuda
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - A Yogo
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Esirkepov
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - H Kiriyama
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Shimomura
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - Y Nakai
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - M Tanoue
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - K Torimoto
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - M Okamoto
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - T Sato
- Japan Atomic Energy Agency, Tokai, Ibaragi, Japan
| | - K Niita
- Research Organization for Information Science and Technology, Tokai, Ibaragi, Japan
| | - J Tamura
- J-PARC Center, Tokai, Ibaragi, Japan
| | - K Nishio
- Japan Atomic Energy Agency, Tokai, Ibaragi, Japan
| | - H Sako
- Japan Atomic Energy Agency, Tokai, Ibaragi, Japan
| | - T Yamauchi
- Graduate School of Maritime Sciences, Kobe University, Japan
| | - Y Watanabe
- Interdisciplinary Graduate School of Engineering Sciences, Kyushu University, Japan
| | - S Bulanov
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
| | - K Kondo
- Japan Atomic Energy Agency, Kizugawa, Kyoto, Japan
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