Co-occurrence patterns of gut microbiome, antibiotic resistome and the perturbation of dietary uptake in captive giant pandas

The microbiome is a key source of antibiotic resistance genes (ARGs), significantly influenced by diet, which highlights the interconnectedness between diet, gut microbiome, and ARGs. Currently, our understanding is limited on the co-occurrence among gut microbiome, antibiotic resistome in the captive giant panda and the perturbation of dietary uptake, especially for the composition and forms in dietary nutrition. Here, a qPCR array with 384 primer sets and 16 S rRNA gene amplicon sequencing were used to characterize the antibiotic resistome and microbiomes in panda feces, dietary bamboo, and soil around the habitat. Diet nutrients containing organic and mineral substances in soluble and insoluble forms were also quantified. Organic and mineral components in water-unextractable fractions were 7.5 to 139 and 637 to 8695 times higher than those in water-extractable portions in bamboo and feces, respectively, while the latter contributed more to the variation (67.5 %) of gut microbiota. Streptococcus, Prevotellaceae, and Bacteroides were the dominant genera in giant pandas. The ARG patterns in panda guts showed higher diversity in old individuals but higher abundance in young ones, driven directly by the bacterial community change and mobile genetic element mediation and indirectly by dietary intervention. Our results suggest that dietary nutrition mainly accounts for the shift of gut microbiota, while bacterial community and mobile genetic elements influenced the variation of gut antibiotic resistome.

Legacy and novel brominated flame retardants in a lab-constructed freshwater ecosystem: Distribution, bioaccumulation, and trophic transfer

The extensive utilization of both legacy and novel brominated flame retardants (BFRs) leads to high environmental concentrations, which would be bioaccumulated by organisms and further transferred through the food webs, causing potential risks to humans. In this study, five BFRs, that showed high detection frequencies and concentrations in sediments from an e-waste dismantling site in Southern China, namely 2,3,4,5,6-pentabromotoluene (PBT), hexabromobenzene (HBB), 1,2-bis(2,4,6-tribromophenoxy) ethane (BTBPE), decabromodiphenyl ethane (DBDPE), and decabromodiphenyl ether (BDE209), were selected as target pollutants in the lab-constructed aquatic food web as part of a micro-ecosystem, to investigate their distribution, bioaccumulation, and trophic transfer patterns. The significant correlations between different samples in the food web indicated that the dietary uptake appeared to influence the levels of BFRs in organisms. Significant negative correlations were observed between the trophic level of organisms and the lipid-normalized concentrations of BTBPE and DBDPE, indicating the occurrence of trophic dilution after 5-month exposure. However, the average values of bioaccumulation factors (BAFs) were from 2.49 to 5.17 L/kg, underscoring the importance of continued concern for environmental risks of BFRs. The organisms occupying higher trophic levels with greater bioaccumulation capacities may play a pivotal role in determining the trophic magnification potentials of BFRs. This research provides a helpful reference for studying the impacts of feeding habits on bioaccumulation and biomagnification, as well as for identifying the fate of BFRs in aquatic environment.

Bioaccumulation but no biomagnification of silver sulfide nanoparticles in freshwater snails and planarians

Bioaccumulation studies are critical in regulatory decision making on the potential environmental risks of engineered nanoparticles (NPs). The present study evaluated the toxicokinetics of silver, taken up from sulfide nanoparticles (Ag₂S NPs; simulating an aged Ag NP form) and AgNO₃ (ionic counterpart), in the pulmonate snail Physa acuta and the planarian Girardia tigrina. The snails were first exposed for 7 days to Ag-spiked water, along with the microalgae Raphidocelis subcapitata upon which they fed setting up a double route exposure, and subsequently provided as pre-exposed food to the planarians. Ag toxicokinetics and bioaccumulation were assessed in planarians and snails, and potential biomagnification from snail to planarian was evaluated. Gut depuration was also explored to understand whether it constitutes a factor likely to influence Ag toxicokinetics and internal concentrations in the test species. Both species revealed Ag uptake in Ag₂S NP and AgNO₃ treatments, with higher uptake from the latter. Uptake by the snails was probably via a combination of water exposure and ingested algae provided as food, but ingestion of algae possibly had higher relevance for Ag uptake from the Ag₂S NPs compared to AgNO₃. For planarians, diet probably was the most important exposure route since no Ag uptake was observed in previous waterborne exposures to Ag₂S NPs. Kinetics and internal Ag concentrations did not significantly differ between depurated and non-depurated snails or planarians. The planarians fed on snails revealed no biomagnification. To the best of our knowledge this is the first study investigating the toxicokinetics and biomagnification of NPs in planarians, and with that providing important data on the kinetics and bioaccumulation of NPs in a relevant benthic species.

In vitro assessment of polychlorinated biphenyl bioaccessibility in meat: Influence of fat content, cooking level and consumer age on consumer uptake

In a risk assessment perspective, this work aims to assess the bioaccessibility of PCBs in meat. A standardised in vitro static digestion protocol was set up and coupled with extraction, clean-up and GC × GC-ToF/MS multianalyte method to monitor the fate of PCBs in meat during digestion. Starting with spiked meat, PCB bioaccessibility in 11% fat medium-cooked meat varied in adults from 20.6% to 30.5% according to congeners. PCB bioaccessibility increased to 44.2-50.1% in 5% fat meat and decreased to 6.2-9.1% and to 14.6-19.4% in digestion conditions mimicking infants and elderly, respectively. Intense cooking also decreased PCB bioaccessibility to 18.0-26.7%. Bioaccessibility data obtained with spiked meat were validated with measurements carried out in incurred meat samples. Finally, mean uptake distributions are obtained from a modular Bayesian approach. These distributions feature a lower mode when the fat content is higher, the meat is well-done cooked, and the consumers are older.

Mercury Uptake Affects the Development of Larus fuscus Chicks

Current emission and mobilization rates of mercury (Hg) in the environment pose extensive threats to both wildlife and human health. Assessing the exposure risk and effects of Hg contamination in model species such as seabirds is essential to understand Hg risks at the population and ecosystem levels. The lesser black-backed gull (Larus fuscus), a generalist seabird species, is an excellent model species because it forages in both marine and terrestrial habitats, which in turn differ in their Hg exposure risk. To identify possible deleterious effects of Hg exposure on developing L. fuscus chicks, a dietary experiment was carried out and chicks were provided a marine, terrestrial, or mixed diet. The effects of embryonic and dietary Hg exposure on chick body condition and physiological state were assessed at different developmental stages until fledging age (30 d). Overall physiological condition was lower in chicks fed a predominantly marine diet, which coincided with higher Hg loads in blood and primary feathers. However, no effect of dietary uptake of Hg was observed on body condition or in terms of genotoxic damage. Body condition and genotoxic damage correlated instead with Hg exposure during embryonic development, which seems to indicate that embryonic exposure to Hg may result in carry-over effects on later chick development. Environ Toxicol Chem 2020;39:2008-2017. © 2020 SETAC.

Effects of salinity and copper co-exposure on copper bioaccumulation in marine rabbitfish Siganus oramin

Marine fish living in estuaries and coastal areas commonly encounter the stress of both salinity and metal pollution. In this study, euryhaline rabbitfish Siganus oramin were exposed to 50 μg L^-1 waterborne Cu or 300 μg g^-1 dry wt dietary Cu at salinity 33‰, 25‰, 20‰, 10‰, and 5‰ for 30 days. The Cu accumulation in the liver (>20-fold increase) and intestine (>5-fold increase) significantly increased after either waterborne or dietary Cu acclimation. Moreover, Cu accumulation was further enhanced in the liver, intestine, plasma, and whole body of Cu-exposed fish at lower salinities. Similarly, the waterborne Cu uptake rate constants (k_us) were stable in the control at different salinities but increased significantly (2-4 times higher) after waterborne Cu exposure. Conversely, the dietary Cu assimilation efficiencies (AEs) were significantly lower in the dietary Cu-exposed fish (3-5%) than in the control fish (8-16%) at different salinities, suggesting that dietary Cu acclimation partially alleviated the dietary Cu uptake from the high-Cu diet. The Cu efflux rate constants (k_es) were comparable among all treatments as 0.060-0.071 d^-1. The changes of Cu accumulation by different salinities and Cu exposure were well estimated by the biokinetic modeling. In summary, the present study indicates that rabbitfish can regulate Cu uptake and accumulation when acclimated to different salinities, but the Cu-exposed rabbitfish failed to prevent the elevation of Cu accumulation at low salinities. It therefore suggested that the concurrence of low salinity and high Cu exposure enhances the risks of Cu bioaccumulation and toxicity in rabbitfish.

Cadmium Bioaccumulation in Aquatic Oligochaetes Using a Biodynamic Model: A Review of Values of Physiological Parameters and Model Validation Using Laboratory and Field Bioaccumulation Data

This study reviews certain physiological digestive parameters in the literature that could be used to predict tissue residues in aquatic oligochaetes using the biodynamic model. Predictions were evaluated with independently measured Cd bioaccumulation data in sediment bioassays and field oligochaetes. The parameter review focused on three species commonly used in ecotoxicity testing and bioaccumulation studies: Tubifex tubifex (Tt), Limnodrilus hoffmeisteri (Lh) and Lumbriculus variegatus (Lv). Median Ingestion rates (g g^-1 d^-1, dw) at unpolluted conditions were 7.8 (Tt), 24.5 (Lh) and 11.5 (Lv), while results were lower (1.7-2.4) at polluted conditions. Assimilation efficiencies ranged from 3.4-19.6% (Tt), 2.7-16.1% (Lh), and 10.9-25.6% (Lv). The biodynamic model accurately predicted Cd tissue concentration in T. tubifex exposed to spiked sediments in laboratory bioassays. Comparisons of predicted vs. measured Cd tissue concentration in bioassays or field aquatic oligochaetes suggest that the biodynamic model can predict Cd tissue concentration within a factor of five in 81.3% of cases, across a range of measured tissue concentrations from 0.1 to 100 μg Cd g^-1 dw. Predictions can be refined by using physiological parameter values that have been measured under varying environmental conditions (e.g. temperature, dissolved oxygen). The model can underestimate tissue concentration by up to one order of magnitude when worms are exposed to highly contaminated sediments. Contrarily, predictions overestimate tissue concentration by up to two orders of magnitude when the measured Cd < 0.1 μg g^-1 dw, although in most cases these predictions do not fail bioaccumulation-based risk assessments, using a tissue threshold value of 1.5 μg Cd g^-1 dw.

Biomagnification of persistent organic pollutants along a high-altitude aquatic food chain in the Tibetan Plateau: Processes and mechanisms

Biomagnification of some persistent organic pollutants (POPs) has been found in marine and freshwater food chains; however, due to the relatively short food chains in high-altitude alpine lakes, whether trophic transfer would result in the biomagnification of POPs is not clear. The transfer of various POPs, including organochlorine pesticides and polychlorinated biphenyls (PCBs), along the aquatic food chain in Nam Co Lake (4700 m), in the central Tibetan Plateau, was studied. The POPs levels in the water, sediment and biota [plankton, invertebrates and fish (Gymnocypris namensis)] of Nam Co were generally low, with concentrations comparable to those reported for the remote Arctic. The composition profiles of POPs in the fish were different from that in the water, but similar to their food. DDEs, DDDs, PCB 138, 153 and 180 displayed significant positive correlations with trophic levels, with trophic magnification factors (TMFs) ranged between 1.5 and 4.2, implying these chemicals can undergo final biomagnification along food chain. A fugacity-based dynamic bioaccumulation model was applied to the fish with localized parameters, by which the simulated concentrations were comparable to the measured data. Modeling results showed that most compounds underwent net gill loss and net gut uptake; only when the net result of the combined gut and gill fluxes would be positive, bioaccumulation could eventually occur. The net accumulation flux increased with fish age, which was caused by the continuous increase of gut uptake by aged fish. Due to the oligotrophic condition, efficient food absorption is likely the key factor that influences the gut POPs uptake. Long residence times with half-lives up to two decades were found for the higher chlorinated PCBs in Gymnocypris namensis.

Adverse effects of bisphenol A on water louse (Asellus aquaticus)

Experiments were performed to study the effects of short and long-term exposure to bisphenol A (BPA) on a freshwater crustacean isopod Asellus aquaticus (L.). Two life stages of isopods were exposed to a range of BPA concentrations, from aqueous and two dietary sources, in the form of with BPA spiked conditioned alder leaf (Alnus glutinosa) discs, or spiked formulated sediment, to determine the relative importance of each source of exposure on the uptake of this contaminant. Several lethal and sublethal endpoints were evaluated in this study to measure the potential effects of BPA on A. aquaticus, including mortality, growth and feeding rate inhibition, mobility inhibition, de-pigmentation and molting disturbances. They signify a correlation to BPA levels and a difference in BPA uptake efficiency from different uptake sources. Results of acute exposure to BPA show a greater sensitivity of test systems using juvenile specimens with a 96 h LC₅₀ of 8.6 mg L(-1) BPA in water medium and a 96 h LC₅₀ of 13.5 mg L(-1) BPA in sediment. In comparison, adult isopods show a 96 h LC₅₀ of 25.1 mg L(-1) BPA in water medium and a 96 h LC₅₀ of 65.1 mg L(-1) BPA in sediment. Observed endpoints of chronic exposures suggest the alder leave discs to be the most efficient uptake source of BPA, in contrast to uptake from water or heterogeneous sediment. Significant (p<0.05) growth inhibition, with a 21d NOEC of 0.5/2.5 mg L(-1) (for juvenile/adult organisms), and feeding rate inhibition, with a 21d NOEC of 0.5/1.0 mg L(-1) (for juvenile/adult organisms), were proven to be the most sensitive toxicity endpoints. An even more sensitive effect turned out to be molting frequency, which was significantly reduced; a 21d NOEC was 1.0 mg L(-1) of BPA for adult organisms and an even lower 21d NOEC of 0.05 mg L(-1) of BPA for juveniles. The observed endpoints are recorded at very low, non-toxic exposure concentrations, indicating that BPA acts as an endocrine disrupting compound, as well as a toxic substance. We also determined the importance of the direct dietary uptake of the pollutants, significant for juveniles as well as adult animals.