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Rajak K, Ghosh A, Mahapatra S. Photophysics of phenol and pentafluorophenol: The role of nonadiabaticity in the optical transition to the lowest bright 1ππ* state. J Chem Phys 2018; 148:054301. [DOI: 10.1063/1.5015986] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Sarkar R, Mahapatra S. Theoretical study of photodetachment spectroscopy of hydrogenated boron cluster anion H2B7− and its deuterated isotopomer. J Chem Phys 2017; 147:194305. [DOI: 10.1063/1.4997217] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Mahapatra S, Dimov V, Gonzalez Estrada A. P445 A Rare cause of upper airway impairment and mouth breathing in adults: adenoid hypertrophy. Ann Allergy Asthma Immunol 2017. [DOI: 10.1016/j.anai.2017.09.041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Nandipati KR, Lan Z, Singh H, Mahapatra S. An alternative laser driven photodissociation mechanism of pyrrole via πσ*1∕S 0 conical intersection. J Chem Phys 2017; 146:214304. [PMID: 28595406 DOI: 10.1063/1.4984775] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
A first principles quantum dynamics study of N-H photodissociation of pyrrole on the S0-1πσ*(A21) coupled electronic states is carried out with the aid of an optimally designed UV-laser pulse. A new photodissociation path, as compared to the conventional barrier crossing on the πσ*1 state, opens up upon electronic transitions under the influence of pump-dump laser pulses, which efficiently populate both the dissociation channels. The interplay of electronic transitions due both to vibronic coupling and the laser pulse is observed in the control mechanism and discussed in detail. The proposed control mechanism seems to be robust, and not discussed in the literature so far, and is expected to trigger future experiments on the πσ*1 photochemistry of molecules of chemical and biological importance. The design of the optimal pulses and their application to enhance the overall dissociation probability is carried out within the framework of optimal control theory. The quantum dynamics of the system in the presence of pulse is treated by solving the time-dependent Schrödinger equation in the semi-classical dipole approximation.
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Shamim S, Mahapatra S, Scappucci G, Klesse WM, Simmons MY, Ghosh A. Dephasing rates for weak localization and universal conductance fluctuations in two dimensional Si:P and Ge:P δ-layers. Sci Rep 2017; 7:46670. [PMID: 28470166 PMCID: PMC5415765 DOI: 10.1038/srep46670] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2017] [Accepted: 03/22/2017] [Indexed: 11/09/2022] Open
Abstract
We report quantum transport measurements on two dimensional (2D) Si:P and Ge:P δ-layers and compare the inelastic scattering rates relevant for weak localization (WL) and universal conductance fluctuations (UCF) for devices of various doping densities (0.3–2.5 × 1018 m−2) at low temperatures (0.3–4.2 K). The phase breaking rate extracted experimentally from measurements of WL correction to conductivity and UCF agree well with each other within the entire temperature range. This establishes that WL and UCF, being the outcome of quantum interference phenomena, are governed by the same dephasing rate.
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Mahapatra S, Kabita S, Bhattacharya D, Sarkar S, Juin SK, Maitra S, Nath P. Purification and development of ELISAs for two forms of vitellogenin in Indian walking catfish, Clarias batrachus (L.). FISH PHYSIOLOGY AND BIOCHEMISTRY 2017; 43:477-491. [PMID: 28247155 DOI: 10.1007/s10695-016-0304-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2015] [Accepted: 10/06/2016] [Indexed: 06/06/2023]
Abstract
Two forms of vitellogenin (Vg: Vg1 and Vg2) were purified from the plasma of estradiol-17β (E2)-treated Indian walking catfish, Clarias batrachus, by gel filtration and adsorption chromatography. Native Vg1 and Vg2 had apparent molecular masses of 375 and 450 kDa, respectively, and both Vgs resolved into two similar major bands (95 and 67 kDa) in SDS-PAGE under reducing condition. Polyclonal antisera raised against each form of Vg were absorbed with a combination of hypophysectomized male catfish serum proteins and alternate Vg to ensure specificity. Immunological analyses verified the presence of Vg1 and Vg2 in the plasma of female catfish. Homologous ELISAs were developed for Vg1 and Vg2 using their respective harvested antisera, which exhibited the detection limit of 100 ng ml-1 for Vg1 and 40 ng ml-1 for Vg2, and low level of cross-reactivity (not parallel to the standard) was found with alternate Vg in each assay. Treatment of male catfish with E2 induced both Vgs showing a proportionate ratio of Vg1 to Vg2 at 5.6:1. Plasma concentrations of both Vgs measured by ELISAs at different reproductive phases of field collected female catfish increased in accordance with the ovarian development, keeping the proportionate ratio of Vg1 to Vg2 at about 2:1 in fish undergoing vitellogenesis during prespawning period and 1:20 during spawning period, suggesting that Vg1 may be the major Vg to contribute in yolk formation, whereas Vg2, besides its role in yolk formation, may facilitate other physiological functions. The present study, thus, demonstrates the occurrence of two unequally synthesized Vgs in the catfish.
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Goswami S, Bussery-Honvault B, Honvault P, Mahapatra S. Effect of internal excitations of reagent diatom on initial state-selected dynamics of C + OH reaction on its second excited (14A″) electronic state. Mol Phys 2017. [DOI: 10.1080/00268976.2017.1296195] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Sarkar R, Rajagopala Reddy S, Mahapatra S, Köppel H. On the Jahn–Teller effect in the X∼2E electronic ground state of CH3F+. Chem Phys 2017. [DOI: 10.1016/j.chemphys.2016.09.011] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Ghosh A, Reddy SN, Reddy SR, Mahapatra S. Vibronic Coupling in the X̃2Πg–Ã2Πu Band System of Diacetylene Radical Cation. J Phys Chem A 2016; 120:7881-7889. [DOI: 10.1021/acs.jpca.6b08892] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Zhang X, Tang W, Li Y, Mahapatra T, Feng Y, Li M, Chen F, Li P, Xing J, Qian S, Ge L, Bu K, Mahapatra S, Tang S, Wang L, Wang N. The HIV/AIDS epidemic among young people in China between 2005 and 2012: results of a spatial temporal analysis. HIV Med 2016; 18:141-150. [PMID: 27552922 DOI: 10.1111/hiv.12408] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/02/2016] [Indexed: 11/30/2022]
Abstract
OBJECTIVES Despite a recent increase in the HIV/AIDS epidemic among young people in China, youth-specific HIV data are limited. METHODS In total, 56 621 individuals with HIV/AIDS, aged 15-24 years, registered in the Case Reporting System of China between 2005 and 2012 and having complete spatial information were included in the present analysis. Spatial autocorrelation (general and local) and space-time scanning were performed using the ArcGIS 10.2 and SaTScan 9.3 software, respectively. RESULTS During 2005-2012, the number of reported HIV/AIDS cases and the proportion of HIV cases increased while the proportion of AIDS cases decreased. Sexual contact became the predominant route of transmission in later years. Spatial analysis showed marked geographical variations in HIV infection among young people throughout China during 2005-2012. The number of new hotspots increased over time. They were mainly localized to southeastern coastal areas, southwestern frontier provinces or autonomous regions (of Guangxi, Yunnan and Sichuan) and Beijing municipality. Later these hotspots disappeared and new hotspots were found in the northeast of the country. Significant clusters of HIV-positive cases were identified in three different time periods, which indicated high HIV transmission among young Chinese people in the recent past. The risk of HIV infection was highest in the first cluster (2009-2012; this cluster was the largest in size) covering the provinces of Guizhou and Yunnan, the Chongqing municipality, Guangxi, and the province of Sichuan. The second cluster (2010-2012) was mostly located in Shanghai, South Jiangsu, Zhejiang and South Anhui, while the third cluster (2010-2012) was located in Beijing and Tianjin. CONCLUSIONS Target-specific comprehensive behavioural interventions are urgently needed to contain the HIV epidemic among young people.
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Sarkar R, Mahapatra S. Vibronic Dynamics of Electronic Ground State of CH2F2+ and Its Deuterated Isotopomer. J Phys Chem A 2016; 120:3504-17. [DOI: 10.1021/acs.jpca.6b02260] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Reddy SN, Mahapatra S. Theoretical Study on Molecules of Interstellar Interest. II. Radical Cation of Compact Polycyclic Aromatic Hydrocarbons. J Phys Chem B 2015; 119:11391-402. [PMID: 26131708 DOI: 10.1021/acs.jpcb.5b03614] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Radical cations of polycyclic aromatic hydrocarbons have been postulated to be molecular carriers of diffuse spectroscopic features observed in the interstellar medium. Several important observations made by stellar and laboratory spectroscopists motivated us to undertake a detailed theoretical study attempting to validate the recorded data. In continuation of our work on this subject, we here focus on a detailed theoretical study of the doublet ground (X̃) and low-lying excited (Ã, B̃, and C̃) electronic states of the radical cation of phenanthrene, pyrene, and acenaphthene molecule. A multistate and multimode theoretical model in a diabatic electronic basis is developed here through extensive ab initio quantum chemistry calculations. Employing this model, first-principles nuclear dynamics calculations are carried out to unravel the spectral assignment, time-dependent dynamics, and photostability of the mentioned electronic states of the radical cations. The theoretical results compare well with the observed experimental data.
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Mahapatra S, Das BP, Kar A, Das R, Hazra K, Sethy S. A cavernous haemangioma of the uterine cervix during pregnancy. SOUTHERN AFRICAN JOURNAL OF GYNAECOLOGICAL ONCOLOGY 2015. [DOI: 10.1080/20742835.2012.11441197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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Bhuyan P, Mahapatra S, Kar A, Kar T, Mahapatra M. Cervical polyp: an unusual presentation of carcinosarcoma. SOUTHERN AFRICAN JOURNAL OF GYNAECOLOGICAL ONCOLOGY 2015. [DOI: 10.1080/20742835.2012.11441190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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Rajagopala Rao T, Mahapatra S, Honvault P. A comparative account of quantum dynamics of the H⁺ + H₂ reaction at low temperature on two different potential energy surfaces. J Chem Phys 2015; 141:064306. [PMID: 25134570 DOI: 10.1063/1.4892043] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Rotationally resolved reaction probabilities, integral cross sections, and rate constant for the H(+) + H2 (v = 0, j = 0 or 1) → H2 (v' = 0, j') + H(+) reaction are calculated using a time-independent quantum mechanical method and the potential energy surface of Kamisaka et al. [J. Chem. Phys. 116, 654 (2002)] (say KBNN PES). All partial wave contributions of the total angular momentum, J, are included to obtain converged cross sections at low collision energies and rate constants at low temperatures. In order to test the accuracy of the KBNN PES, the results obtained here are compared with those obtained in our earlier work [P. Honvault et al., Phys. Rev. Lett. 107, 023201 (2011)] using the accurate potential energy surface of Velilla et al. [J. Chem. Phys. 129, 084307 (2008)]. Integral cross sections and rate constants obtained on the two potential energy surfaces considered here show remarkable differences in terms of magnitude and dependence on collision energy (or temperature) which can be attributed to the differences observed in the topography of the surfaces near to the entrance channel. This clearly shows the inadequacy of the KBNN PES for calculations at low collision energies.
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Rajagopala Rao T, Guillon G, Mahapatra S, Honvault P. Quantum dynamics of 16O + 36O2 and 18O + 32O2 exchange reactions. J Chem Phys 2015; 142:174311. [DOI: 10.1063/1.4919860] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Ram R, Swarnalatha G, Mahapatra S, Dakshinamurty KV. Embolic occlusion of arteriovenous fistula due to infective endocarditis. Indian J Nephrol 2014; 24:400-1. [PMID: 25484539 PMCID: PMC4244725 DOI: 10.4103/0971-4065.138705] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
Abstract
A 45-year-old male on maintenance hemodialysis through right radio cephalic arteriovenous fistula (AVF) also had mitral regurgitation. He presented with fever and chills of 2 days duration along with pain and swelling at median cubital fossa of right upper limb. Local examination revealed warmth, redness, and tenderness at median cubital fossa. AVF thrill was absent. Echocardiography revealed vegetations on the mitral valve. An extensive search of literature did not reveal an instance of embolic occlusion of AVF due to vegetations of infective endocarditis.
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Goswami S, Rao TR, Mahapatra S, Bussery-Honvault B, Honvault P. Time-Dependent Quantum Wave Packet Dynamics of S + OH Reaction on Its Electronic Ground State. J Phys Chem A 2014; 118:5915-26. [DOI: 10.1021/jp504757g] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Shamim S, Mahapatra S, Scappucci G, Klesse WM, Simmons MY, Ghosh A. Spontaneous breaking of time-reversal symmetry in strongly interacting two-dimensional electron layers in silicon and germanium. PHYSICAL REVIEW LETTERS 2014; 112:236602. [PMID: 24972220 DOI: 10.1103/physrevlett.112.236602] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2014] [Indexed: 06/03/2023]
Abstract
We report experimental evidence of a remarkable spontaneous time-reversal symmetry breaking in two-dimensional electron systems formed by atomically confined doping of phosphorus (P) atoms inside bulk crystalline silicon (Si) and germanium (Ge). Weak localization corrections to the conductivity and the universal conductance fluctuations were both found to decrease rapidly with decreasing doping in the Si:P and Ge:P delta layers, suggesting an effect driven by Coulomb interactions. In-plane magnetotransport measurements indicate the presence of intrinsic local spin fluctuations at low doping, providing a microscopic mechanism for spontaneous lifting of the time-reversal symmetry. Our experiments suggest the emergence of a new many-body quantum state when two-dimensional electrons are confined to narrow half-filled impurity bands.
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Reddy SR, Mahapatra S. Theoretical study of photodetachment processes of anionic boron cluster. III. B7−. J Chem Phys 2014; 140:084311. [DOI: 10.1063/1.4865395] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Reddy SN, Mahapatra S. Theoretical study on molecules of interstellar interest. I. Radical cation of noncompact polycyclic aromatic hydrocarbons. J Phys Chem A 2013; 117:8737-49. [PMID: 23742165 DOI: 10.1021/jp4033645] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs), in particular, their radical cation (PAH(+)), have long been postulated to be the important molecular species in connection with the spectroscopic observations in the interstellar medium. Motivated by numerous important observations by stellar as well as laboratory spectroscopists, we undertook detailed quantum mechanical studies of the structure and dynamics of electronically excited PAH(+) in an attempt to establish possible synergism with the recorded data. In this paper, we focus on the quantum chemistry and dynamics of the doublet ground (X̃) and low-lying excited (Ã, B̃, and C̃) electronic states of the radical cation of tetracene, pentacene, and hexacene molecule. This study is aimed to unravel photostability, spectroscopy, and time-dependent dynamics of their excited electronic states. In order to proceed with the theoretical investigations, we construct suitable multistate and multimode Hamiltonians for these systems with the aid of extensive ab initio calculations of their electronic energy surfaces. The diabatic coupling surfaces are derived from the calculated adiabatic electronic energies. First principles nuclear dynamics calculations are then carried out employing the constructed Hamiltonians and with the aid of time-independent and time-dependent quantum mechanical methods. The theoretical results obtained in this study are found to be in good accord with those recorded in experiments. The lifetime of excited electronic states is estimated from their time-dependent dynamics and compared with the available data.
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Büch H, Mahapatra S, Rahman R, Morello A, Simmons MY. Spin readout and addressability of phosphorus-donor clusters in silicon. Nat Commun 2013; 4:2017. [DOI: 10.1038/ncomms3017] [Citation(s) in RCA: 84] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2012] [Accepted: 05/16/2013] [Indexed: 11/09/2022] Open
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Rao TR, Goswami S, Mahapatra S, Bussery-Honvault B, Honvault P. Time-dependent quantum wave packet dynamics of the C + OH reaction on the excited electronic state. J Chem Phys 2013; 138:094318. [DOI: 10.1063/1.4793395] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Vandael DHF, Mahapatra S, Calorio C, Marcantoni A, Carbone E. Cav1.3 and Cav1.2 channels of adrenal chromaffin cells: emerging views on cAMP/cGMP-mediated phosphorylation and role in pacemaking. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2012; 1828:1608-18. [PMID: 23159773 DOI: 10.1016/j.bbamem.2012.11.013] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2012] [Revised: 11/05/2012] [Accepted: 11/08/2012] [Indexed: 12/21/2022]
Abstract
Voltage-gated Ca²⁺ channels (VGCCs) are voltage sensors that convert membrane depolarizations into Ca²⁺ signals. In the chromaffin cells of the adrenal medulla, the Ca²⁺ signals driven by VGCCs regulate catecholamine secretion, vesicle retrievals, action potential shape and firing frequency. Among the VGCC-types expressed in these cells (N-, L-, P/Q-, R- and T-types), the two L-type isoforms, Ca(v)1.2 and Ca(v)1.3, control key activities due to their particular activation-inactivation gating and high-density of expression in rodents and humans. The two isoforms are also effectively modulated by G protein-coupled receptor pathways delimited in membrane micro-domains and by the cAMP/PKA and NO/cGMP/PKG phosphorylation pathways which induce prominent Ca²⁺ current changes if opposingly regulated. The two L-type isoforms shape the action potential and directly participate to vesicle exocytosis and endocytosis. The low-threshold of activation and slow rate of inactivation of Ca(v)1.3 confer to this channel the unique property of carrying sufficient inward current at subthreshold potentials able to activate BK and SK channels which set the resting potential, the action potential shape, the cell firing mode and the degree of spike frequency adaptation during spontaneous firing or sustained depolarizations. These properties help chromaffin cells to optimally adapt when switching from normal to stress-mimicking conditions. Here, we will review past and recent findings on cAMP- and cGMP-mediated modulations of Ca(v)1.2 and Ca(v)1.3 and the role that these channels play in the control of chromaffin cell firing. This article is part of a Special Issue entitled: Calcium channels.
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Mondal T, Reddy SR, Mahapatra S. Photophysics of fluorinated benzene. III. Hexafluorobenzene. J Chem Phys 2012; 137:054311. [DOI: 10.1063/1.4739502] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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