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Puzzolo D, Pisani A, Malta C, Santoro G, Meduri A, Abbate F, Montalbano G, Wylegala E, Rana RA, Bucchieri F, Ieni A, Aragona P, Micali A. Structural, ultrastructural, and morphometric study of the zebrafish ocular surface: a model for human corneal diseases? Curr Eye Res 2017; 43:175-185. [PMID: 29111817 DOI: 10.1080/02713683.2017.1385087] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
PURPOSE A morphological and morphometric study of the adult zebrafish ocular surface was performed to provide a comprehensive description of its parts and to evaluate its similarity to the human. MATERIALS AND METHODS The eyes of adult zebrafish were processed for light, transmission and scanning electron microscopy, and for immunohistochemical stain of corneal nerves; a morphometric analysis was also performed on several morphological parameters. RESULTS The corneal epithelium was formed by five layers of cells. No Bowman's layer could be demonstrated. The stroma consisted of lamellae of different thickness with few keratocytes. The Descemet's membrane was absent as the flat and polygonal endothelial cells directly adhered to the deepest corneal lamella. The immunohistochemical stain of neurofilaments failed to demonstrate corneal nerve fibers. The conjunctival epithelium was stratified, overlying the stroma formed by a subepithelial and a deep layer, this latter connected to the scleral cartilage. In the peripheral cornea and in the conjunctiva, many goblet and rodlet cells were observed. The morphometric analysis showed that the peripheral cornea epithelium was thicker when compared to the other parts of the ocular surface, with smaller superficial cells. Desmosomes and hemidesmosomes in the conjunctiva were significantly fewer in number than the other parts of the ocular surface. The stroma was thinner in the conjunctiva than in the cornea, while corneal lamellae were thicker in the intermediate stroma. CONCLUSIONS The zebrafish ocular surface showed significant differences compared to the human, such as the absence of Bowman's layer, Descemet's membrane and corneal nerve fibers, the reduced stromal thickness, and the presence of rodlet cells. On the basis of these original findings, it is suggested that the use of the zebrafish as a model for studying normal or pathological human corneas should be undertaken with particular caution.
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Affiliation(s)
- Domenico Puzzolo
- a Department of Biomedical Sciences , University of Messina , Messina , Italy
| | - Antonina Pisani
- a Department of Biomedical Sciences , University of Messina , Messina , Italy
| | - Consuelo Malta
- a Department of Biomedical Sciences , University of Messina , Messina , Italy
| | - Giuseppe Santoro
- a Department of Biomedical Sciences , University of Messina , Messina , Italy
| | - Alessandro Meduri
- a Department of Biomedical Sciences , University of Messina , Messina , Italy
| | - Francesco Abbate
- b Department of Veterinary Sciences, Laboratory of Zebrafish Neuromorphology , University of Messina , Messina , Italy
| | - Giuseppe Montalbano
- b Department of Veterinary Sciences, Laboratory of Zebrafish Neuromorphology , University of Messina , Messina , Italy
| | - Edward Wylegala
- c Clinical Department of Ophthalmology, School of Medicine with the Division of Dentistry in Zabrze , Medical University of Silesia , Katowice , Poland
| | - Rosa Alba Rana
- d Department of Medicine and Science of Aging , University of Chieti , Chieti , Italy
| | - Fabio Bucchieri
- e Department of Experimental Medicine, Section of Anatomy , University of Palermo , Palermo , Italy
| | - Antonio Ieni
- f Department of Human Pathology , University of Messina , Messina , Italy
| | - Pasquale Aragona
- g Department of Biomedical Sciences, Regional Referral Center for the Ocular Surface Diseases , University of Messina , Messina , Italy
| | - Antonio Micali
- a Department of Biomedical Sciences , University of Messina , Messina , Italy
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Komagata H, Ichimura T, Matsuta Y, Ishikawa M, Shinoda K, Kobayashi N, Sasaki A. Feature analysis of cell nuclear chromatin distribution in support of cervical cytology. J Med Imaging (Bellingham) 2017; 4:047501. [PMID: 29057290 PMCID: PMC5644512 DOI: 10.1117/1.jmi.4.4.047501] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2017] [Accepted: 09/26/2017] [Indexed: 11/20/2022] Open
Abstract
Cytology, a method of estimating cancer or cellular atypia from microscopic images of scraped specimens, is used according to the pathologist’s experience to diagnose cases based on the degree of structural changes and atypia. Several methods of cell feature quantification, including nuclear size, nuclear shape, cytoplasm size, and chromatin texture, have been studied. We focus on chromatin distribution in the cell nucleus and propose new feature values that indicate the chromatin complexity, spreading, and bias, including convex hull ratio on multiple binary images, intensity distribution from the gravity center, and tangential component intensity and texture biases. The characteristics and cellular classification accuracies of the proposed features were verified through experiments using cervical smear samples, for which clear nuclear morphologic diagnostic criteria are available. In this experiment, we also used a stepwise support vector machine to create a machine learning model and a cross-validation algorithm with which to derive identification accuracy. Our results demonstrate the effectiveness of our proposed feature values.
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Affiliation(s)
- Hideki Komagata
- Saitama Medical University, Faculty of Health and Medical Care, Saitama, Japan
| | - Takaya Ichimura
- Saitama Medical University, Department of Pathology, Saitama, Japan
| | | | - Masahiro Ishikawa
- Saitama Medical University, Faculty of Health and Medical Care, Saitama, Japan
| | - Kazuma Shinoda
- Utsunomiya University, Graduate School of Engineering, Tochigi, Japan
| | - Naoki Kobayashi
- Saitama Medical University, Faculty of Health and Medical Care, Saitama, Japan
| | - Atsushi Sasaki
- Saitama Medical University, Department of Pathology, Saitama, Japan
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53
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Poola PK, John R. Label-free nanoscale characterization of red blood cell structure and dynamics using single-shot transport of intensity equation. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:1-7. [PMID: 28984088 DOI: 10.1117/1.jbo.22.10.106001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2017] [Accepted: 08/23/2017] [Indexed: 06/07/2023]
Abstract
We report the results of characterization of red blood cell (RBC) structure and its dynamics with nanometric sensitivity using transport of intensity equation microscopy (TIEM). Conventional transport of intensity technique requires three intensity images and hence is not suitable for studying real-time dynamics of live biological samples. However, assuming the sample to be homogeneous, phase retrieval using transport of intensity equation has been demonstrated with single defocused measurement with x-rays. We adopt this technique for quantitative phase light microscopy of homogenous cells like RBCs. The main merits of this technique are its simplicity, cost-effectiveness, and ease of implementation on a conventional microscope. The phase information can be easily merged with regular bright-field and fluorescence images to provide multidimensional (three-dimensional spatial and temporal) information without any extra complexity in the setup. The phase measurement from the TIEM has been characterized using polymeric microbeads and the noise stability of the system has been analyzed. We explore the structure and real-time dynamics of RBCs and the subdomain membrane fluctuations using this technique.
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Affiliation(s)
- Praveen Kumar Poola
- Indian Institute of Technology Hyderabad, Department of Biomedical Engineering, Kandi, Telangana, India
| | - Renu John
- Indian Institute of Technology Hyderabad, Department of Biomedical Engineering, Kandi, Telangana, India
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54
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Höhl M, DeTemple D, Lyutenski S, Leuteritz G, Varkentin A, Schmitt HA, Lenarz T, Roth B, Meinhardt-Wollweber M, Morgner U. Optical properties of the human round window membrane. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:1-7. [PMID: 29076311 DOI: 10.1117/1.jbo.22.10.105007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2017] [Accepted: 09/26/2017] [Indexed: 06/07/2023]
Abstract
Optical techniques are effective tools for diagnostic applications in medicine and are particularly attractive for the noninvasive analysis of biological tissues and fluids in vivo. Noninvasive examinations of substances via a fiber optic probe need to consider the optical properties of biological tissues obstructing the optical path. This applies to the analysis of the human perilymph, which is located behind the round window membrane. The composition of this inner ear liquid is directly correlated to inner ear hearing loss. In this work, experimental methods for studying the optical properties of the human round window membrane ex vivo are presented. For the first time, a comprehensive investigation of this tissue is performed, including optical transmission, forward scattering, and Raman scattering. The results obtained suggest the application of visible wavelengths (>400 nm) for investigating the perilymph behind the round window membrane in future.
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Affiliation(s)
- Martin Höhl
- Leibniz Universität Hannover, Institut für Quantenoptik, Hannover, Germany
- Leibniz Universität Hannover, Hannoversches Zentrum für Optische Technologien, Hannover, Germany
- Cluster of Excellence "Hearing4all," Oldenburg, Germany
| | - Daphne DeTemple
- Leibniz Universität Hannover, Institut für Quantenoptik, Hannover, Germany
- Leibniz Universität Hannover, Hannoversches Zentrum für Optische Technologien, Hannover, Germany
- Cluster of Excellence "Hearing4all," Oldenburg, Germany
| | - Stefan Lyutenski
- Medizinische Hochschule Hannover, Experimentelle Otorhinolaryngologie, Hannover, Germany
| | - Georg Leuteritz
- Leibniz Universität Hannover, Hannoversches Zentrum für Optische Technologien, Hannover, Germany
| | - Arthur Varkentin
- Leibniz Universität Hannover, Hannoversches Zentrum für Optische Technologien, Hannover, Germany
| | - Heike Andrea Schmitt
- Cluster of Excellence "Hearing4all," Oldenburg, Germany
- Medizinische Hochschule Hannover, Experimentelle Otorhinolaryngologie, Hannover, Germany
| | - Thomas Lenarz
- Cluster of Excellence "Hearing4all," Oldenburg, Germany
- Medizinische Hochschule Hannover, Experimentelle Otorhinolaryngologie, Hannover, Germany
| | - Bernhard Roth
- Leibniz Universität Hannover, Hannoversches Zentrum für Optische Technologien, Hannover, Germany
| | - Merve Meinhardt-Wollweber
- Leibniz Universität Hannover, Institut für Quantenoptik, Hannover, Germany
- Leibniz Universität Hannover, Hannoversches Zentrum für Optische Technologien, Hannover, Germany
- Cluster of Excellence "Hearing4all," Oldenburg, Germany
| | - Uwe Morgner
- Leibniz Universität Hannover, Institut für Quantenoptik, Hannover, Germany
- Leibniz Universität Hannover, Hannoversches Zentrum für Optische Technologien, Hannover, Germany
- Cluster of Excellence "Hearing4all," Oldenburg, Germany
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55
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Xu J, Tian X, Meng X, Kong Y, Gao S, Cui H, Liu F, Xue L, Liu C, Wang S. Wavefront-sensing-based autofocusing in microscopy. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:1-7. [PMID: 28856872 DOI: 10.1117/1.jbo.22.8.086012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Accepted: 08/10/2017] [Indexed: 06/07/2023]
Abstract
Massive image acquisition is required along the optical axis in the classical image-analysis-based autofocus method, which significantly decreases autofocus efficiency. A wavefront-sensing-based autofocus technique is proposed to increase the speed of autofocusing and obtain high localization accuracy. Intensities at different planes along the optical axis can be computed numerically after extracting the wavefront at defocus position with the help of the transport-of-intensity equation method. According to the focus criterion, the focal plane can then be determined, and after sample shifting to this plane, the in-focus image can be recorded. The proposed approach allows for fast, precise focus detection with fewer image acquisitions compared to classical image-analysis-based autofocus techniques, and it can be applied in commercial microscopes only with an extra illumination filter.
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Affiliation(s)
- Jing Xu
- Jiangnan University, School of Science, Department of Optoelectronic Information Science and Enginee, China
| | - Xiaolin Tian
- Jiangnan University, School of Science, Department of Optoelectronic Information Science and Enginee, China
| | - Xin Meng
- Jiangnan University, School of Science, Department of Optoelectronic Information Science and Enginee, China
| | - Yan Kong
- Jiangnan University, School of Science, Department of Optoelectronic Information Science and Enginee, China
| | - Shumei Gao
- Jiangnan University, School of Science, Department of Optoelectronic Information Science and Enginee, China
| | - Haoyang Cui
- Shanghai University of Electric Power, College of Electronics and Information Engineering, Shanghai, China
| | - Fei Liu
- Nanjing Agricultural University, Single Molecule Nanometry Laboratory, Nanjing, China
| | - Liang Xue
- Shanghai University of Electric Power, College of Electronics and Information Engineering, Shanghai, China
| | - Cheng Liu
- Jiangnan University, School of Science, Department of Optoelectronic Information Science and Enginee, China
- Shanghai Institute of Optics and Fine Mechanics, Shanghai, China
| | - Shouyu Wang
- Jiangnan University, School of Science, Department of Optoelectronic Information Science and Enginee, China
- Nanjing Agricultural University, Single Molecule Nanometry Laboratory, Nanjing, China
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Okoro C, Toussaint KC. Second-harmonic patterned polarization-analyzed reflection confocal microscope. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:1-8. [PMID: 28836417 DOI: 10.1117/1.jbo.22.8.086007] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Accepted: 07/31/2017] [Indexed: 05/02/2023]
Abstract
We introduce the second-harmonic patterned polarization-analyzed reflection confocal (SPPARC) microscope-a multimodal imaging platform that integrates Mueller matrix polarimetry with reflection confocal and second-harmonic generation (SHG) microscopy. SPPARC microscopy provides label-free three-dimensional (3-D), SHG-patterned confocal images that lend themselves to spatially dependent, linear polarimetric analysis for extraction of rich polarization information based on the Mueller calculus. To demonstrate its capabilities, we use SPPARC microscopy to analyze both porcine tendon and ligament samples and find differences in both circular degree-of-polarization and depolarization parameters. Moreover, using the collagen-generated SHG signal as an endogenous counterstain, we show that the technique can be used to provide 3-D polarimetric information of the surrounding extrafibrillar matrix plus cells or EFMC region. The unique characteristics of SPPARC microscopy holds strong potential for it to more accurately and quantitatively describe microstructural changes in collagen-rich samples in three spatial dimensions.
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Affiliation(s)
- Chukwuemeka Okoro
- University of Illinois at Urbana-Champaign, PROBE Lab, Department of Electrical and Computer Enginee, United States
| | - Kimani C Toussaint
- University of Illinois at Urbana-Champaign, PROBE Lab, Department of Mechanical Science and Engineer, United States
- University of Illinois at Urbana-Champaign, PROBE Lab, Affiliate in the Department of Electrical and, United States
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57
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Firmiano EMS, Cardoso NN, Sales A, Santos MAJ, Mendes ALS, Nascimento AA. Immunohistochemical study of the six types of endocrine cells in the enteropancreatic system of the lizard Tropidurus torquatus (Squamata: Tropiduridae). THE EUROPEAN ZOOLOGICAL JOURNAL 2017. [DOI: 10.1080/24750263.2017.1330429] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Affiliation(s)
- E. M. S. Firmiano
- Postgraduation Program in Animal Biology, Federal Rural University of Rio de Janeiro, Seropédica, Rio de Janeiro, Brazil
| | - N. N. Cardoso
- Postgraduation Program in Animal Biology, Federal Rural University of Rio de Janeiro, Seropédica, Rio de Janeiro, Brazil
| | - A. Sales
- Science Institute of Biological and Health; Histology and Embryology Field, Animal Biology Department, Federal Rural University of Rio de Janeiro, Seropédica, Rio de Janeiro, Seropédica, Rio de Janeiro, Brazil
| | - M. A. J. Santos
- Science Institute of Biological and Health; Histology and Embryology Field, Animal Biology Department, Federal Rural University of Rio de Janeiro, Seropédica, Rio de Janeiro, Seropédica, Rio de Janeiro, Brazil
| | - A. L. S. Mendes
- Science Institute of Biological and Health; Histology and Embryology Field, Animal Biology Department, Federal Rural University of Rio de Janeiro, Seropédica, Rio de Janeiro, Seropédica, Rio de Janeiro, Brazil
| | - A. A. Nascimento
- Science Institute of Biological and Health; Histology and Embryology Field, Animal Biology Department, Federal Rural University of Rio de Janeiro, Seropédica, Rio de Janeiro, Seropédica, Rio de Janeiro, Brazil
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58
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Guo D, Li D, Li J, Li Y, Hu X, Guan F, Yang B. Topical application of the hematostatic agent Surgiflo® could attenuate brain injury in experimental TBI mice. Neurol Res 2017; 39:830-836. [PMID: 28566060 DOI: 10.1080/01616412.2017.1330815] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
OBJECT The pathologies resulting from traumatic brain injury (TBI) have been thoroughly studied, but rarely have the effects of bleeding and coagulation in the early stage of TBI been considered. In this study, we investigated the effects of topical Surgiflo® application on brain injury in experimental TBI mice using S100β, MAP-2 and mNSS scores. METHODS TBI was induced by modified weight drop injury in male C57BL/6 mice. The mice were then randomly divided into (i) the sham group, (ii) TBI mice applied with saline (vehicle), and (iii) TBI mice applied with Surgiflo® in the same volume. Modified neurological severity scores (mNSS) were measured on days 0 (before surgery), 1, 3, 7, and 28 to evaluate neurologic functional deficits. At day 28, the mice were sacrificed, and the forebrains were sliced. The effects of Surgiflo® on microtubule-associated protein 2 and serum S100β protein were examined by immunohistochemistry and electro-chemiluminescence immunoassay. RESULTS Serum S100β protein levels were significantly elevated at different time points (24 h, 3 days, 7 days) in the TBI groups (p < 0.01) compared to normal control groups. Surgiflo® induced a lower concentration of serum S100β protein levels at day 3 (p < 0.05) and day 7 (p < 0.05) compared to the TBI group applied with saline. H&E staining showed that Surgiflo® treatment led to a 45% decrease in cortical brain lesion volume and in subcortical white matter 28 days after TBI. Compared with the saline-treated group, the number of MAP2-positive cells was significantly increased in the perilesional area of the Surgiflo®-treated group. The Surgiflo®-treated group exhibited lower mNSS scores on days 7 and 28 than did the saline-treated group. DISCUSSION Surgiflo® treatment produced a significant decrease in serum S100β protein levels in TBI mouse models, which may lead to an improvement in the recovery of TBI models.
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Affiliation(s)
- Dewei Guo
- a Department of Neurosurgery , The First Affiliated Hospital of Zhengzhou University , Zhengzhou , P.R. China
| | - Dongpeng Li
- a Department of Neurosurgery , The First Affiliated Hospital of Zhengzhou University , Zhengzhou , P.R. China
| | - Jinghong Li
- b Department of Neurology , The First Affiliated Hospital of Zhengzhou University , Zhengzhou , P.R. China
| | - Yunfeng Li
- c Department of Neurological rehabilitation Laboratory , Xuchang Vocational Technical College , Xuchang , P.R. China
| | - Xiang Hu
- d Department of Neurological rehabilitation Laboratory , Shenzhen Beike Cell Engineering Institute , Shenzhen , P.R. China
| | - Fangxia Guan
- e Department of Bioengineering , Zhengzhou University , Zhengzhou , P.R. China
| | - Bo Yang
- a Department of Neurosurgery , The First Affiliated Hospital of Zhengzhou University , Zhengzhou , P.R. China
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Tserevelakis GJ, Avtzi S, Tsilimbaris MK, Zacharakis G. Delineating the anatomy of the ciliary body using hybrid optical and photoacoustic imaging. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:60501. [PMID: 28613347 DOI: 10.1117/1.jbo.22.6.060501] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2017] [Accepted: 05/23/2017] [Indexed: 06/07/2023]
Abstract
We demonstrate the application of an extended field of view hybrid microscope, integrating distinct optical and photoacoustic (PA) contrast modes, for the precise three-dimensional anatomy delineation of the ciliary body/iris structures in healthy rabbit eyes ex vivo. The glutaraldehyde-induced autofluorescence and the intrinsic PA signals provided by each of the employed imaging modalities were characterized by a high spatial complementarity, offering thus rich morphological information regarding the pars plana and pars plicata ciliary body portions, the iris, as well as, the attached zonule fiber strands. The bimodal microscopy approach presented could find application on studies involving the ocular accommodation mechanism or pathological ciliary body conditions, as a powerful diagnostic technique contributing to the understanding of ocular physiology and function.
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Affiliation(s)
- George J Tserevelakis
- Foundation for Research and Technology Hellas, Institute of Electronic Structure and Laser, Heraklion, Crete, Greece
| | - Stella Avtzi
- Foundation for Research and Technology Hellas, Institute of Electronic Structure and Laser, Heraklion, Crete, Greece
| | - Miltiadis K Tsilimbaris
- University of Crete, School of Medicine, Laboratory of Vision and Optics, Heraklion, Crete, Greece
| | - Giannis Zacharakis
- Foundation for Research and Technology Hellas, Institute of Electronic Structure and Laser, Heraklion, Crete, Greece
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Huynh RN, Nehmetallah G, Raub CB. Noninvasive assessment of articular cartilage surface damage using reflected polarized light microscopy. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:65001. [PMID: 28586854 DOI: 10.1117/1.jbo.22.6.065001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2017] [Accepted: 05/15/2017] [Indexed: 05/02/2023]
Abstract
Articular surface damage occurs to cartilage during normal aging, osteoarthritis, and in trauma. A noninvasive assessment of cartilage microstructural alterations is useful for studies involving cartilage explants. This study evaluates polarized reflectance microscopy as a tool to assess surface damage to cartilage explants caused by mechanical scraping and enzymatic degradation. Adult bovine articular cartilage explants were scraped, incubated in collagenase, or underwent scrape and collagenase treatments. In an additional experiment, cartilage explants were subject to scrapes at graduated levels of severity. Polarized reflectance parameters were compared with India ink surface staining, features of histological sections, changes in explant wet weight and thickness, and chondrocyte viability. The polarized reflectance signal was sensitive to surface scrape damage and revealed individual scrape features consistent with India ink marks. Following surface treatments, the reflectance contrast parameter was elevated and correlated with image area fraction of India ink. After extensive scraping, polarized reflectance contrast and chondrocyte viability were lower than that from untreated explants. As part of this work, a mathematical model was developed and confirmed the trend in the reflectance signal due to changes in surface scattering and subsurface birefringence. These results demonstrate the effectiveness of polarized reflectance microscopy to sensitively assess surface microstructural alterations in articular cartilage explants.
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Affiliation(s)
- Ruby N Huynh
- The Catholic University of America, Department of Biomedical Engineering, Washington, United States
| | - George Nehmetallah
- The Catholic University of America, Department of Electrical Engineering, Washington, United States
| | - Christopher B Raub
- The Catholic University of America, Department of Biomedical Engineering, Washington, United States
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Al Ashhab A, Sweity A, Bayramoglu B, Herzberg M, Gillor O. Biofouling of reverse osmosis membranes: effects of cleaning on biofilm microbial communities, membrane performance, and adherence of extracellular polymeric substances. BIOFOULING 2017; 33:397-409. [PMID: 28468513 DOI: 10.1080/08927014.2017.1318382] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Accepted: 04/06/2017] [Indexed: 06/07/2023]
Abstract
Laboratory-scale reverse osmosis (RO) flat-sheet systems were used with two parallel flow cells, one treated with cleaning agents and a control (ie undisturbed). The cleaning efforts increased the affinity of extracellular polymeric substances (EPS) to the RO membrane and altered the biofilm surface structure. Analysis of the membrane biofilm community composition revealed the dominance of Proteobacteria. However, within the phylum Proteobacteria, γ-Proteobacteria dominated the cleaned membrane biofilm, while β-Proteobacteria dominated the control biofilm. The composition of the fungal phyla was also altered by cleaning, with enhancement of Ascomycota and suppression of Basidiomycota. The results suggest that repeated cleaning cycles select for microbial groups that strongly attach to the RO membrane surface by producing rigid and adhesive EPS that hampers membrane performance.
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Affiliation(s)
- Ashraf Al Ashhab
- a Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research , Ben-Gurion University of the Negev , Midreshet Ben Gurion , Israel
| | - Amer Sweity
- a Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research , Ben-Gurion University of the Negev , Midreshet Ben Gurion , Israel
| | - Bihter Bayramoglu
- a Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research , Ben-Gurion University of the Negev , Midreshet Ben Gurion , Israel
| | - Moshe Herzberg
- a Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research , Ben-Gurion University of the Negev , Midreshet Ben Gurion , Israel
| | - Osnat Gillor
- a Zuckerberg Institute for Water Research, Jacob Blaustein Institutes for Desert Research , Ben-Gurion University of the Negev , Midreshet Ben Gurion , Israel
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Tsujita N, Kuwahara H, Koyama H, Yanaka N, Arakawa K, Kuniyoshi H. Molecular characterization of aspartylglucosaminidase, a lysosomal hydrolase upregulated during strobilation in the moon jellyfish, Aurelia aurita. Biosci Biotechnol Biochem 2017; 81:938-950. [PMID: 28388360 DOI: 10.1080/09168451.2017.1285686] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
The life cycle of the moon jellyfish, Aurelia aurita, alternates between a benthic asexual polyp stage and a planktonic sexual medusa (jellyfish) stage. Transition from polyp to medusa is called strobilation. To investigate the molecular mechanisms of strobilation, we screened for genes that are upregulated during strobilation using the differential display method and we identified aspartylglucosaminidase (AGA), which encodes a lysosomal hydrolase. Similar to AGAs from other species, Aurelia AGA possessed an N-terminal signal peptide and potential N-glycosylation sites. The genomic region of Aurelia AGA was approximately 9.8 kb in length and contained 12 exons and 11 introns. Quantitative RT-PCR analysis revealed that AGA expression increased during strobilation, and was then decreased in medusae. To inhibit AGA function, we administered the lysosomal acidification inhibitors, chloroquine or bafilomycin A1, to animals during strobilation. Both inhibitors disturbed medusa morphogenesis at the oral end, suggesting involvement of lysosomal hydrolases in strobilation.
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Affiliation(s)
- Natsumi Tsujita
- a Graduate School of Biosphere Science , Hiroshima University , Higashi-Hiroshima , Japan
| | - Hiroyuki Kuwahara
- a Graduate School of Biosphere Science , Hiroshima University , Higashi-Hiroshima , Japan
| | - Hiroki Koyama
- a Graduate School of Biosphere Science , Hiroshima University , Higashi-Hiroshima , Japan
| | - Noriyuki Yanaka
- a Graduate School of Biosphere Science , Hiroshima University , Higashi-Hiroshima , Japan
| | - Kenji Arakawa
- b Graduate School of Advanced Sciences of Matter , Hiroshima University , Higashi-Hiroshima , Japan
| | - Hisato Kuniyoshi
- a Graduate School of Biosphere Science , Hiroshima University , Higashi-Hiroshima , Japan
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63
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Brown LR, Caldwell GS. Tissue and spine regeneration in the temperate sea urchin Psammechinus miliaris. INVERTEBR REPROD DEV 2017. [DOI: 10.1080/07924259.2017.1287779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Leah R. Brown
- School of Marine Science and Technology, Newcastle University, Newcastle upon Tyne, UK
| | - Gary S. Caldwell
- School of Marine Science and Technology, Newcastle University, Newcastle upon Tyne, UK
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Tehrani KF, Kner P, Mortensen LJ. Characterization of wavefront errors in mouse cranial bone using second-harmonic generation. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:36012. [PMID: 28323304 DOI: 10.1117/1.jbo.22.3.036012] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Accepted: 02/23/2017] [Indexed: 05/03/2023]
Abstract
Optical aberrations significantly affect the resolution and signal-to-noise ratio of deep tissue microscopy. As multiphoton microscopy is applied deeper into tissue, the loss of resolution and signal due to propagation of light in a medium with heterogeneous refractive index becomes more serious. Efforts in imaging through the intact skull of mice cannot typically reach past the bone marrow ( ? 150 ?? ? m of depth) and have limited resolution and penetration depth. Mechanical bone thinning or optical ablation of bone enables deeper imaging, but these methods are highly invasive and may impact tissue biology. Adaptive optics is a promising noninvasive alternative for restoring optical resolution. We characterize the aberrations present in bone using second-harmonic generation imaging of collagen. We simulate light propagation through highly scattering bone and evaluate the effect of aberrations on the point spread function. We then calculate the wavefront and expand it in Zernike orthogonal polynomials to determine the strength of different optical aberrations. We further compare the corrected wavefront and the residual wavefront error, and suggest a correction element with high number of elements or multiconjugate wavefront correction for this highly scattering environment.
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Affiliation(s)
- Kayvan Forouhesh Tehrani
- University of Georgia, Regenerative Bioscience Center, Rhodes Center for ADS, Athens, Georgia, United States
| | - Peter Kner
- University of Georgia, College of Engineering, Athens, Georgia, United States
| | - Luke J Mortensen
- University of Georgia, Regenerative Bioscience Center, Rhodes Center for ADS, Athens, Georgia, United StatesbUniversity of Georgia, College of Engineering, Athens, Georgia, United States
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65
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Reddikumar M, Tanabe A, Hashimoto N, Cense B. Optical coherence tomography with a 2.8-mm beam diameter and sensorless defocus and astigmatism correction. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:26005. [PMID: 28195602 DOI: 10.1117/1.jbo.22.2.026005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2016] [Accepted: 01/23/2017] [Indexed: 05/02/2023]
Abstract
An optical coherence tomography (OCT) system with a 2.8-mm beam diameter is presented. Sensorless defocus correction can be performed with a Badal optometer and astigmatism correction with a liquid crystal device. OCT B-scans were used in an image-based optimization algorithm for aberration correction. Defocus can be corrected from ? 4.3 ?? D to + 4.3 ?? D and vertical and oblique astigmatism from ? 2.5 ?? D to + 2.5 ?? D . A contrast gain of 6.9 times was measured after aberration correction. In comparison with a 1.3-mm beam diameter OCT system, this concept achieved a 3.7-dB gain in dynamic range on a model retina. Both systems were used to image the retina of a human subject. As the correction of the liquid crystal device can take more than 60 s, the subject’s spectacle prescription was adopted instead. This resulted in a 2.5 times smaller speckle size compared with the standard OCT system. The liquid crystal device for astigmatism correction does not need a high-voltage amplifier and can be operated at 5 V. The correction device is small ( 9 ?? mm × 30 ?? mm × 38 ?? mm ) and can easily be implemented in existing designs for OCT.
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Affiliation(s)
- Maddipatla Reddikumar
- Utsunomiya University, Center for Optical Research and Education, Utsunomiya, Tochigi, Japan
| | - Ayano Tanabe
- Citizen Holding, Development Department, Tokorozawa, Saitama, Japan
| | | | - Barry Cense
- Utsunomiya University, Center for Optical Research and Education, Utsunomiya, Tochigi, Japan
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66
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Brysiewicz A, Formicki K, Tański A, Wesołowski P. Magnetic field effect on melanophores of the European whitefish Coregonus lavaretus (Linnaeus, 1758) and vendace Coregonus albula (Linnaeus, 1758) (Salmonidae) during early embryogenesis. EUROPEAN ZOOLOGICAL JOURNAL 2017. [DOI: 10.1080/11250003.2016.1272644] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- A. Brysiewicz
- West Pomeranian Research Centre, Institute of Technology and Life Sciences, Szczecin, Poland
| | - K. Formicki
- Department of Hydrobiology, Ichthyology and Biotechnology of Reproduction, West Pomeranian University of Technology in Szczecin, Szczeci, Poland
| | - A. Tański
- Department of Hydrobiology, Ichthyology and Biotechnology of Reproduction, West Pomeranian University of Technology in Szczecin, Szczeci, Poland
| | - P. Wesołowski
- West Pomeranian Research Centre, Institute of Technology and Life Sciences, Szczecin, Poland
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67
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Liu CJ, Williams KE, Orr HT, Akkin T. Visualizing and mapping the cerebellum with serial optical coherence scanner. NEUROPHOTONICS 2017; 4:011006. [PMID: 27725947 PMCID: PMC5048104 DOI: 10.1117/1.nph.4.1.011006] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2016] [Accepted: 09/12/2016] [Indexed: 05/12/2023]
Abstract
We present the visualization of the mouse cerebellum and adjacent brainstem using a serial optical coherence scanner, which integrates a vibratome slicer and polarization-sensitive optical coherence tomography for ex vivo imaging. The scanner provides intrinsic optical contrasts to distinguish the cerebellar cortical layers and white matter. Images from serial scans reveal the large-scale anatomy in detail and map the nerve fiber pathways in the cerebellum and brainstem. By incorporating a water-immersion microscope objective, we also present high-resolution tiled images that delineate fine structures in the cerebellum and brainstem.
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Affiliation(s)
- Chao J. Liu
- University of Minnesota, Department of Biomedical Engineering, 312 Church Street S.E., Minneapolis, Minnesota 55455, United States
| | - Kristen E. Williams
- University of Minnesota, Department of Biomedical Engineering, 312 Church Street S.E., Minneapolis, Minnesota 55455, United States
| | - Harry T. Orr
- University of Minnesota, Institute of Translational Neuroscience, 2101 6th Street S.E., Minneapolis, Minnesota 55455, United States
- University of Minnesota, Department of Laboratory Medicine and Pathology, 420 Delaware Street S.E., Minneapolis, Minnesota 55455, United States
| | - Taner Akkin
- University of Minnesota, Department of Biomedical Engineering, 312 Church Street S.E., Minneapolis, Minnesota 55455, United States
- Address all correspondence to: Taner Akkin, E-mail:
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68
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Tanabe A, Hibi T, Ipponjima S, Matsumoto K, Yokoyama M, Kurihara M, Hashimoto N, Nemoto T. Transmissive liquid-crystal device for correcting primary coma aberration and astigmatism in biospecimen in two-photon excitation laser scanning microscopy. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:121503. [PMID: 27624000 DOI: 10.1117/1.jbo.21.12.121503] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2016] [Accepted: 08/15/2016] [Indexed: 05/24/2023]
Abstract
All aberrations produced inside a biospecimen can degrade the quality of a three-dimensional image in two-photon excitation laser scanning microscopy. Previously, we developed a transmissive liquid-crystal device to correct spherical aberrations that improved the image quality of a fixed-mouse-brain slice treated with an optical clearing reagent. In this study, we developed a transmissive device that corrects primary coma aberration and astigmatism. The motivation for this study is that asymmetric aberration can be induced by the shape of a biospecimen and/or by a complicated refractive-index distribution in a sample; this can considerably degrade optical performance even near the sample surface. The device’s performance was evaluated by observing fluorescence beads. The device was inserted between the objective lens and microscope revolver and succeeded in improving the spatial resolution and fluorescence signal of a bead image that was originally degraded by asymmetric aberration. Finally, we implemented the device for observing a fixed whole mouse brain with a sloping surface shape and complicated internal refractive-index distribution. The correction with the device improved the spatial resolution and increased the fluorescence signal by ?2.4×. The device can provide a simple approach to acquiring higher-quality images of biospecimens.
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Affiliation(s)
- Ayano Tanabe
- Hokkaido University, Graduate School of Information Science and Technology, N14W9, Kita-Ward, Sapporo, Hokkaido 060-0814, JapanbHokkaido University, Research Institute for Electronic Science, N20W10, Kita-Ward, Sapporo, Hokkaido 001-0020, JapancCitizen Holdings Co., Ltd., 840, Shimotomi, Tokorozawa, Saitama 359-8511, Japan
| | - Terumasa Hibi
- Hokkaido University, Research Institute for Electronic Science, N20W10, Kita-Ward, Sapporo, Hokkaido 001-0020, Japan
| | - Sari Ipponjima
- Hokkaido University, Graduate School of Information Science and Technology, N14W9, Kita-Ward, Sapporo, Hokkaido 060-0814, JapanbHokkaido University, Research Institute for Electronic Science, N20W10, Kita-Ward, Sapporo, Hokkaido 001-0020, Japan
| | - Kenji Matsumoto
- Citizen Holdings Co., Ltd., 840, Shimotomi, Tokorozawa, Saitama 359-8511, Japan
| | - Masafumi Yokoyama
- Citizen Holdings Co., Ltd., 840, Shimotomi, Tokorozawa, Saitama 359-8511, Japan
| | - Makoto Kurihara
- Citizen Holdings Co., Ltd., 840, Shimotomi, Tokorozawa, Saitama 359-8511, Japan
| | - Nobuyuki Hashimoto
- Citizen Holdings Co., Ltd., 840, Shimotomi, Tokorozawa, Saitama 359-8511, Japan
| | - Tomomi Nemoto
- Hokkaido University, Graduate School of Information Science and Technology, N14W9, Kita-Ward, Sapporo, Hokkaido 060-0814, JapanbHokkaido University, Research Institute for Electronic Science, N20W10, Kita-Ward, Sapporo, Hokkaido 001-0020, Japan
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69
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Wang J, Wang F, Zhang P, Liu H, He J, Zhang C, Fan M, Chen X. PGC-1α over-expression suppresses the skeletal muscle atrophy and myofiber-type composition during hindlimb unloading. Biosci Biotechnol Biochem 2016; 81:500-513. [PMID: 27869526 DOI: 10.1080/09168451.2016.1254531] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
Disuse leads to severe muscle atrophy and a slow-to-fast myofiber-type transition. PGC-1α (Peroxisome proliferator-activated receptor γ coactivator 1α) is documented to play an important role in muscle atrophy and slow-twitch myofiber determination. Transcription of atrophy-related Atrogin-1 by FoxO3 can be reduced by PGC-1α. While Smad3 augments FoxO3-induced Atrogin-1 and MuRF1 promoter activity. So PGC-1α, as a transcription co-activator, may regulate hindlimb unloading (HU)-induced myofiber-type transition and muscle atrophy through Smad3. Our results showed that transgenic PGC-1α mice resisted HU-induced muscle loss, atrophy-related genes expression, and slow-to-fast myofiber-type transition. Furthermore, over-expression of PGC-1α resisted the increase in pSmad3 during muscle atrophy in vivo and in vitro. And, PGC-1α over-expression inhibited the expression of atrogenes via suppressing the phosphorylation of Smad3 in vitro. Thus, PGC-1α is effective in regulating myofiber-type transition during HU, and it alleviates skeletal muscle atrophy partially through suppressing the activation of Smad3.
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Affiliation(s)
- Jing Wang
- a Department of Neurobiology , School of Basic Medical Sciences, Capital Medical University , Beijing , China
| | - Fei Wang
- b National Key Laboratory of Human Factors Engineering , China Astronaut Research and Training Center , Beijing , China
| | - Peng Zhang
- c State Key Laboratory of Space Medicine Fundamentals and Application , China Astronaut Research and Training Center , Beijing , China
| | - Hongju Liu
- c State Key Laboratory of Space Medicine Fundamentals and Application , China Astronaut Research and Training Center , Beijing , China
| | - Jian He
- c State Key Laboratory of Space Medicine Fundamentals and Application , China Astronaut Research and Training Center , Beijing , China
| | - Chenyu Zhang
- d State Key Laboratory of Pharmaceutical Biotechnology , School of Life Sciences, Nanjing University , Nanjing , China
| | - Ming Fan
- a Department of Neurobiology , School of Basic Medical Sciences, Capital Medical University , Beijing , China
| | - Xiaoping Chen
- b National Key Laboratory of Human Factors Engineering , China Astronaut Research and Training Center , Beijing , China.,c State Key Laboratory of Space Medicine Fundamentals and Application , China Astronaut Research and Training Center , Beijing , China
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70
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Coradini JG, Kunz RI, Kakihata CMM, Errero TK, Bonfleur ML, Ribeiro LDFC, Brancalhão RMC, Bertolini GRF. Swimming does not alter nociception threshold in obese rats submitted to median nerve compression. Neurol Res 2016; 37:1118-24. [PMID: 26923582 DOI: 10.1080/01616412.2015.1114742] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
OBJECTIVES We, herein, analyzed the effect of swimming on nociception threshold and peripheral nerve regeneration in lean and obese rats submitted to median nerve compression. METHODS To induce obesity, newborn male Wistar rats received injections of monosodium glutamate (MSG), whereas the control (CTL) group received saline. The animals were separated into 6 groups; control and obese (CTL and MSG), control and obese with lesion (CTL LES and MSG LES), and control and obese with lesion submitted to physical exercise (CTL LES PE and MSG LES PE). RESULTS Median nerve compression reduced nociception threshold in CTL LES and MSG LES rats. Swimming effectively altered nociception only in CTL LES PE animals. Lean and obese animals displayed histological differences, when compared to sedentary animals, and exercise improved axon regeneration in both groups. The brain-derived neurotrophic factor and GAP 43 protein expression was greater in animals submitted to nervous compression without alteration by exercise. DISCUSSION In conclusion, swimming, a conservative treatment for peripheral nerve lesions, was not able to improve the nociception threshold in obese rats.
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Affiliation(s)
- Josinéia Gresele Coradini
- 1 Laboratório do Estudo das Lesões e Recursos Fisioterapêuticos, Universidade Estadual do Oeste do Paraná , Cascavel, Brazil
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71
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Paluchowski LA, Nordgaard HB, Bjorgan A, Hov H, Berget SM, Randeberg LL. Can spectral-spatial image segmentation be used to discriminate experimental burn wounds? JOURNAL OF BIOMEDICAL OPTICS 2016; 21:101413. [PMID: 27228458 DOI: 10.1117/1.jbo.21.10.101413] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2015] [Accepted: 04/28/2016] [Indexed: 05/04/2023]
Abstract
Hyperspectral imaging (HSI) is a noncontact and noninvasive optical modality emerging the field of medical research. The goal of this study was to determine the ability of HSI and image segmentation to discriminate burn wounds in a preclinical porcine model. A heated brass rod was used to introduce burn wounds of graded severity in a pig model and a sequence of hyperspectral data was recorded up to 8-h postinjury. The hyperspectral images were processed by an unsupervised spectral–spatial segmentation algorithm. Segmentation was validated using results from histology. The proposed algorithm was compared to K-means segmentation and was found superior. The obtained segmentation maps revealed separated zones within the burn sites, indicating a variation in burn severity. The suggested image-processing scheme allowed mapping dynamic changes of spectral properties within the burn wounds over time. The results of this study indicate that unsupervised spectral–spatial segmentation applied on hyperspectral images can discriminate burn injuries of varying severity.
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Affiliation(s)
- Lukasz A Paluchowski
- Norwegian University of Science and Technology, Faculty of Information Technology, Department of Electronics and Telecommunications, Mathematics and Electrical Engineering, NTNU, Trondheim 7491, Norway
| | - Håvard B Nordgaard
- Trondheim University Hospital, St. Olavs Hospital, Department of Plastic Surgery, Trondheim 7030, Norway
| | - Asgeir Bjorgan
- Norwegian University of Science and Technology, Faculty of Information Technology, Department of Electronics and Telecommunications, Mathematics and Electrical Engineering, NTNU, Trondheim 7491, Norway
| | - Håkon Hov
- Trondheim University Hospital, St. Olavs Hospital, Department of Pathology and Medical Genetics, Trondheim 7030, NorwaydNorwegian University of Science and Technology, Faculty of Medicine, NTNU, Department of Laboratory Medicine, Children's and Women's He
| | - Sissel M Berget
- Trondheim University Hospital, St. Olavs Hospital, Department of Pathology and Medical Genetics, Trondheim 7030, Norway
| | - Lise L Randeberg
- Norwegian University of Science and Technology, Faculty of Information Technology, Department of Electronics and Telecommunications, Mathematics and Electrical Engineering, NTNU, Trondheim 7491, Norway
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72
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Zauli A, Maurizi E, Carpaneto GM, Chiari S, Merivee E, Svensson GP, Di Giulio A. Scanning electron microscopy analysis of the antennal sensilla in the rare saproxylic beetle Elater ferrugineus (Coleoptera: Elateridae). ACTA ACUST UNITED AC 2016. [DOI: 10.1080/11250003.2016.1211766] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- A. Zauli
- Department of Science, Roma Tre University, Rome, Italy
| | - E. Maurizi
- Department of Science, Roma Tre University, Rome, Italy
- Centro di Ricerca per l’Agrobiologia e la Pedologia, Consiglio per la Ricerca in agricoltura e l’analisi dell’economia agraria (CREA-ABP), Firenze, Italy
- Corpo Forestale dello Stato, Centro Nazionale per lo Studio e la Conservazione della Biodiversità Forestale “Bosco Fontana” di Verona (CNBFVR), Marmirolo, Italy
| | | | - S. Chiari
- Department of Science, Roma Tre University, Rome, Italy
- Centro di Ricerca per l’Agrobiologia e la Pedologia, Consiglio per la Ricerca in agricoltura e l’analisi dell’economia agraria (CREA-ABP), Firenze, Italy
- Corpo Forestale dello Stato, Centro Nazionale per lo Studio e la Conservazione della Biodiversità Forestale “Bosco Fontana” di Verona (CNBFVR), Marmirolo, Italy
| | - E. Merivee
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | | | - A. Di Giulio
- Department of Science, Roma Tre University, Rome, Italy
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73
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Sergina S, Ilyukha V, Uzenbaeva L, Khizhkin E, Antonova E. Morphologic changes in the pineal gland of rats exposed to continuous darkness. BIOL RHYTHM RES 2016. [DOI: 10.1080/09291016.2016.1183842] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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74
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Sowa MG, Kuo WC, Ko ACT, Armstrong DG. Review of near-infrared methods for wound assessment. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:091304. [PMID: 27087164 DOI: 10.1117/1.jbo.21.9.091304] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2016] [Accepted: 03/04/2016] [Indexed: 06/05/2023]
Abstract
Wound management is a challenging and costly problem that is growing in importance as people are living longer. Instrumental methods are increasingly being relied upon to provide objective measures of wound assessment to help guide management. Technologies that employ near-infrared (NIR) light form a prominent contingent among the existing and emerging technologies. We review some of these technologies. Some are already established, such as indocyanine green fluorescence angiography, while we also speculate on others that have the potential to be clinically relevant to wound monitoring and assessment. These various NIR-based technologies address clinical wound management needs along the entire healing trajectory of a wound.
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Affiliation(s)
- Michael G Sowa
- National Research Council Canada, Medical Devices Portfolio, 435 Ellice Avenue, Winnipeg, Manitoba R3B 1Y6, Canada
| | - Wen-Chuan Kuo
- National Yang-Ming University, Institute of Biophotonics, No.155, Sec.2, Linong Street, Taipei 112, Taiwan
| | - Alex C-T Ko
- National Research Council Canada, Medical Devices Portfolio, 435 Ellice Avenue, Winnipeg, Manitoba R3B 1Y6, Canada
| | - David G Armstrong
- University of Arizona College of Medicine, Vascular/Endovascular, P.O. Box 245072, Tucson, Arizona 85724-5072, United States
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75
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Silvestri L, Costantini I, Sacconi L, Pavone FS. Clearing of fixed tissue: a review from a microscopist's perspective. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:081205. [PMID: 27020691 DOI: 10.1117/1.jbo.21.8.081205] [Citation(s) in RCA: 96] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2015] [Accepted: 02/26/2016] [Indexed: 05/18/2023]
Abstract
Chemical clearing of fixed tissues is becoming a key instrument for the three-dimensional reconstruction of macroscopic tissue portions, including entire organs. Indeed, the growing interest in this field has both triggered and been stimulated by recent advances in high-throughput microscopy and data analysis methods, which allowed imaging and management of large samples. The strong entanglement between clearing methods and imaging technology is often overlooked, as typical classification of the former is based only on the chemicals used. Here, we review the recent literature in the field, proposing a taxonomy of clearing techniques based on their mating with the major high-throughput microscopies. We hope that this application-oriented classification can help researchers to find the protocol best suited to their experiment among the many present in the literature.
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Affiliation(s)
- Ludovico Silvestri
- National Institute of Optics, National Research Council, Via Nello Carrara 1, 50019 Sesto Fiorentino, Florence, ItalybEuropean Laboratory for Non-linear Spectroscopy, Via Nello Carrara 1, 50019 Sesto Fiorentino, Florence, Italy
| | - Irene Costantini
- European Laboratory for Non-linear Spectroscopy, Via Nello Carrara 1, 50019 Sesto Fiorentino, Florence, Italy
| | - Leonardo Sacconi
- National Institute of Optics, National Research Council, Via Nello Carrara 1, 50019 Sesto Fiorentino, Florence, ItalybEuropean Laboratory for Non-linear Spectroscopy, Via Nello Carrara 1, 50019 Sesto Fiorentino, Florence, Italy
| | - Francesco Saverio Pavone
- National Institute of Optics, National Research Council, Via Nello Carrara 1, 50019 Sesto Fiorentino, Florence, ItalybEuropean Laboratory for Non-linear Spectroscopy, Via Nello Carrara 1, 50019 Sesto Fiorentino, Florence, ItalycUniversity of Florence, Dep
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76
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Liu CJ, Black AJ, Wang H, Akkin T. Quantifying three-dimensional optic axis using polarization-sensitive optical coherence tomography. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:70501. [PMID: 27387702 DOI: 10.1117/1.jbo.21.7.070501] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2016] [Accepted: 06/16/2016] [Indexed: 05/23/2023]
Abstract
The optic axis of birefringent samples indicates the direction of optical anisotropy, which should be described in three-dimensional (3-D) space. We present a method to quantify the complete 3-D optic axis orientation calculated from in-plane optic axis measurements from a polarization-sensitive optical coherence tomography system. The in-plane axis orientations with different illumination angles allow the calculation of the necessary polar angle. The method then provides the information to produce the actual birefringence. The method and results from a biological sample are presented.
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77
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Tuchin VV. Polarized light interaction with tissues. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:71114. [PMID: 27121763 DOI: 10.1117/1.jbo.21.7.071114] [Citation(s) in RCA: 140] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2016] [Accepted: 03/22/2016] [Indexed: 05/02/2023]
Abstract
This tutorial-review introduces the fundamentals of polarized light interaction with biological tissues and presents some of the recent key polarization optical methods that have made possible the quantitative studies essential for biomedical diagnostics. Tissue structures and the corresponding models showing linear and circular birefringence, dichroism, and chirality are analyzed. As the basis for a quantitative description of the interaction of polarized light with tissues, the theory of polarization transfer in a random medium is used. This theory employs the modified transfer equation for Stokes parameters to predict the polarization properties of single- and multiple-scattered optical fields. The near-order of scatterers in tissues is accounted for to provide an adequate description of tissue polarization properties. Biomedical diagnostic techniques based on polarized light detection, including polarization imaging and spectroscopy, amplitude and intensity light scattering matrix measurements, and polarization-sensitive optical coherence tomography are described. Examples of biomedical applications of these techniques for early diagnostics of cataracts, detection of precancer, and prediction of skin disease are presented. The substantial reduction of light scattering multiplicity at tissue optical clearing that leads to a lesser influence of scattering on the measured intrinsic polarization properties of the tissue and allows for more precise quantification of these properties is demonstrated.
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Affiliation(s)
- Valery V Tuchin
- Saratov National Research State University, Research-Educational Institute of Optics and Biophotonics, 83 Astrakhanskaya street, Saratov 410012, RussiabInstitute of Precision Mechanics and Control of Russian Academy of Sciences, 24 Rabochaya street, Sarat
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da Costa GDFA, Souza RDC, de Araújo GM, Gurgel BCDV, Barbosa GAS, Calderon PDS. Does TGF-β play a role in degenerative temporomandibular joint diseases? A systematic review. Cranio 2016; 35:228-232. [PMID: 27326853 DOI: 10.1080/08869634.2016.1193961] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
OBJECTIVES The objective of this review was to assess the literature for evidence investigating the role of TGF-β in temporomandibular joint disease with osteoarthritis. METHOD An electronic and manual search was carried out on the databases, MEDLINE/PubMed, Cochrane Library, Web Of Science, and EMBASE, from 1975 to December 2015 by two independent evaluators to identify clinical and laboratory trials in English. RESULTS The search produced 693 records. Following a process of selection based on certain criteria, eight articles were included. DISCUSSION This systematic review suggests that TGF-β administration alone does not result in joint regeneration; other factors may be involved, such as TGF-β receptor expression ,and TGF-β receptor mutations that do not allow a correct transduction, resulting in TGF-β deficiency. The anabolism induced by this growth factor is also able to neutralize the catabolic processes that are elevated in osteoarthritis. Therefore, further studies are essential to determine how the concentration of TGF-β in the temporomandibular joints acts as a potential marker for the development of degenerative conditions.
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79
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Cersosimo MCP, Matos AB, Couto RSD, Marques MM, de Freitas PM. Short-pulse Er:YAG laser increases bond strength of composite resin to sound and eroded dentin. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:48001. [PMID: 27086692 DOI: 10.1117/1.jbo.21.4.048001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2016] [Accepted: 03/24/2016] [Indexed: 06/05/2023]
Abstract
This study evaluated the influence of the irradiation with a short-pulse Er:YAG laser on the adhesion of composite resin to sound and eroded dentin (SD and ED). Forty-six samples of occlusal dentine, obtained from human molars, had half of their surface protected, while the other half was submitted to erosive cycles. Afterward, 23 samples were irradiated with Er:YAG laser, resulting in four experimental groups: SD, sound irradiated dentine (SID—Er:YAG, 50 μs 50 μs , 2 Hz, 80 mJ, and 12.6 J/cm 2 12.6 J/cm2 ), ED, and eroded irradiated dentin (EID—erosion + Er:YAG laser). A self-etching adhesive system was used, and then cylinders of composite resin were prepared. A microshear bond strength test was performed after 24 h storage (n=20 n=20 ). The morphology of SD and ED, with or without Er:YAG laser irradiation, was evaluated under scanning electron microscopy (n=3 n=3 ). Bond strength values (MPa) were subjected to analysis of variance followed by Tukey’s test. Statistically significant differences were found among the experimental groups: SD (9.76±3.39 B 9.76±3.39 B ), SID (12.77±5.09 A 12.77±5.09 A ), ED (5.12±1.72 D 5.12±1.72 D ), and EID (7.62±3.39 C 7.62±3.39 C ). Even though erosion reduces the adhesion to dentin, the surface irradiation with a short-pulse Er:YAG laser increases adhesion to both ED and SD.
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Wang H, Gao B, Zhang Y, Xu H. Effects of inhibiting connexin43 on expression of fibroblast growth factor in prolactinomas in rats. Neurol Res 2016; 38:456-60. [DOI: 10.1080/01616412.2016.1142722] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Key AP, Dykens EM. Face repetition detection and social interest: An ERP study in adults with and without Williams syndrome. Soc Neurosci 2016; 11:652-64. [PMID: 26667404 DOI: 10.1080/17470919.2015.1130743] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
The present study examined possible neural mechanisms underlying increased social interest in persons with Williams syndrome (WS). Visual event-related potentials (ERPs) during passive viewing were used to compare incidental memory traces for repeated vs. single presentations of previously unfamiliar social (faces) and nonsocial (houses) images in 26 adults with WS and 26 typical adults. Results indicated that participants with WS developed familiarity with the repeated faces and houses (frontal N400 response), but only typical adults evidenced the parietal old/new effect (previously associated with stimulus recollection) for the repeated faces. There was also no evidence of exceptional salience of social information in WS, as ERP markers of memory for repeated faces vs. houses were not significantly different. Thus, while persons with WS exhibit behavioral evidence of increased social interest, their processing of social information in the absence of specific instructions may be relatively superficial. The ERP evidence of face repetition detection in WS was independent of IQ and the earlier perceptual differentiation of social vs. nonsocial stimuli. Large individual differences in ERPs of participants with WS may provide valuable information for understanding the WS phenotype and have relevance for educational and treatment purposes.
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Affiliation(s)
- Alexandra P Key
- a Vanderbilt Kennedy Center for Research on Human Development , Vanderbilt University , Nashville , TN , USA.,b Department of Hearing and Speech Sciences , School of Medicine, Vanderbilt University , Nashville , TN , USA
| | - Elisabeth M Dykens
- a Vanderbilt Kennedy Center for Research on Human Development , Vanderbilt University , Nashville , TN , USA.,c Department of Psychology and Human Development , Vanderbilt University , Nashville , TN , USA
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Li L, Li X, Chen L, Sun P, Hao N, Jiang B. Morphology, proliferation, alignment, and new collagen synthesis of mesenchymal stem cells on a microgrooved collagen membrane. JOURNAL OF BIOMATERIALS SCIENCE-POLYMER EDITION 2016; 27:581-98. [PMID: 26723935 DOI: 10.1080/09205063.2015.1136919] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
The topographic cues of the extracellular matrix may have significant effects upon cellular behavior, such as adhesion, spreading, migration, proliferation, differentiation, and in particular, morphology and orientation. In this study, we examined the effects of microgrooved collagen membrane (MCM) on mesenchymal stem cell (MSC) behavior. The MCM (9 μm in periodicity, and 1-2 μm in depth) was fabricated on an untreated (nonpolar) and smooth polystyrene substrate, based on the absorption and self-assembly properties of collagen on the polystyrene substrate. Methyl thiazolyl tetrazolium assay revealed that cell proliferation on the MCM was enhanced compared with the smooth collagen membrane at day 2. Qualitative observation of MSC behavior using confocal laser scanning microscopy and scanning electron microscopy showed that MSCs grew with a highly elongated morphology and were aligned strictly along the direction of the microgrooves. Additionally, scanning electron microscopy revealed the oriented cells produced a collagenous matrix on the MCM that had a preferential orientation, whereas the collagenous matrix produced by randomly oriented MSCs on the smooth collagen membrane was disorganized. Future studies should investigate the fabrication of oriented topographical substrates, based on the natural biomaterial collagen, to guide cell alignment and oriented growth along definite directions. These substrates may help produce aligned collagenous matrices that could have good potential for the production of tissue substitutes.
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Affiliation(s)
- Lili Li
- a National Engineering Research Centre for Biomaterials , Sichuan University , Chengdu , P. R. China
| | - Xia Li
- a National Engineering Research Centre for Biomaterials , Sichuan University , Chengdu , P. R. China
| | - Lu Chen
- a National Engineering Research Centre for Biomaterials , Sichuan University , Chengdu , P. R. China
| | - Peng Sun
- a National Engineering Research Centre for Biomaterials , Sichuan University , Chengdu , P. R. China.,b Key Laboratory for Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology , Sichuan University , Chengdu , P. R. China
| | - Na Hao
- a National Engineering Research Centre for Biomaterials , Sichuan University , Chengdu , P. R. China
| | - Bo Jiang
- a National Engineering Research Centre for Biomaterials , Sichuan University , Chengdu , P. R. China
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Simkova I, Urbanek K, Prochazka V, Konecny M, Gregar J, Geierova M, Prochazka V, Buriankova E. Acute pancreatitis as the first manifestation of duodenal MALT lymphoma. Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub 2015; 159:688-94. [PMID: 26498211 DOI: 10.5507/bp.2015.047] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2015] [Accepted: 09/10/2015] [Indexed: 12/22/2022] Open
Abstract
BACKGROUND Possibly any tumor that can cause mechanical obstruction of the distal bile duct can induce acute pancreatitis. However, acute pancreatitis as the first clinical manifestation of duodenal lymphoma is extremely rare. OBJECTIVE To report the case of a patient with acute pancreatitis as an extremely rare first manifestation of duodenal MALT lymphoma and possible association with erythema nodosum. METHODS Case report of a 66-year-old woman who was diagnosed with acute pancreatitis caused by infiltration with duodenal lymphoma. RESULTS Acute pancreatitis was confirmed by CT imaging. Detailed investigation revealed a duodenal mass causing pancreatic injury. Histological analysis established the diagnosis of MALT lymphoma. The patient's medical history also included erythema nodosum. Complete remission of the malignancy was achieved with chemotherapy. CONCLUSION This is the first published case report of acute pancreatitis caused by the growth of duodenal MALT lymphoma. An association with erythema nodosum is possible.
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Affiliation(s)
- Ivona Simkova
- Department of Internal Medicine II - Gastroenterology and Hepatology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc, Czech Republic
| | - Karel Urbanek
- Department of Pharmacology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc
| | - Vlastimil Prochazka
- Department of Internal Medicine II - Gastroenterology and Hepatology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc, Czech Republic
| | - Michal Konecny
- Department of Internal Medicine II - Gastroenterology and Hepatology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc, Czech Republic
| | - Jan Gregar
- Department of Internal Medicine II - Gastroenterology and Hepatology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc, Czech Republic
| | - Marie Geierova
- Department of Clinical and Molecular Pathology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc
| | - Vit Prochazka
- Department of Hemato-Oncology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc
| | - Eva Buriankova
- Department of Nuclear Medicine, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc
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Postek MT, Vladár AE. Does Your SEM Really Tell the Truth?-How Would You Know? Part 4: Charging and its Mitigation. PROCEEDINGS OF SPIE--THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING 2015; 9636:963605 (October 21, 2015); doi:10.1117/12.2195344 Text Size: A A A. [PMID: 28663665 PMCID: PMC5486231 DOI: 10.1117/12.2195344] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Abstract
This is the fourth part of a series of tutorial papers discussing various causes of measurement uncertainty in scanned particle beam instruments, and some of the solutions researched and developed at NIST and other research institutions. Scanned particle beam instruments, especially the scanning electron microscope (SEM), have gone through tremendous evolution to become indispensable tools for many and diverse scientifc and industrial applications. These improvements have significantly enhanced their performance and made them far easier to operate. But, the ease of operation has also fostered operator complacency. In addition, the user-friendliness has reduced the apparent need for extensive operator training. Unfortunately, this has led to the idea that the SEM is just another expensive "digital camera" or another peripheral device connected to a computer and that all of the problems in obtaining good quality images and data have been solved. Hence, one using these instruments may be lulled into thinking that all of the potential pitfalls have been fully eliminated and believing that, everything one sees on the micrograph is always correct. But, as described in this and the earlier papers, this may not be the case. Care must always be taken when reliable quantitative data are being sought. The first paper in this series discussed some of the issues related to signal generation in the SEM, including instrument calibration, electron beam-sample interactions and the need for physics-based modeling to understand the actual image formation mechanisms to properly interpret SEM images. The second paper has discussed another major issue confronting the microscopist: specimen contamination and methods to eliminate it. The third paper discussed mechanical vibration and stage drift and some useful solutions to mitigate the problems caused by them, and here, in this the fourth contribution, the issues related to specimen "charging" and its mitigation are discussed relative to dimensional metrology.
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Affiliation(s)
- Michael T Postek
- Semiconductor and Dimensional Metrology Division, National Institute of Standards and Technology, Gaithersburg, MD 20899 USA
| | - András E Vladár
- Semiconductor and Dimensional Metrology Division, National Institute of Standards and Technology, Gaithersburg, MD 20899 USA
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Müllenbroich MC, Silvestri L, Onofri L, Costantini I, Hoff MV, Sacconi L, Iannello G, Pavone FS. Comprehensive optical and data management infrastructure for high-throughput light-sheet microscopy of whole mouse brains. NEUROPHOTONICS 2015; 2:041404. [PMID: 26158018 PMCID: PMC4484248 DOI: 10.1117/1.nph.2.4.041404] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2015] [Accepted: 05/14/2015] [Indexed: 05/08/2023]
Abstract
Comprehensive mapping and quantification of neuronal projections in the central nervous system requires high-throughput imaging of large volumes with microscopic resolution. To this end, we have developed a confocal light-sheet microscope that has been optimized for three-dimensional (3-D) imaging of structurally intact clarified whole-mount mouse brains. We describe the optical and electromechanical arrangement of the microscope and give details on the organization of the microscope management software. The software orchestrates all components of the microscope, coordinates critical timing and synchronization, and has been written in a versatile and modular structure using the LabVIEW language. It can easily be adapted and integrated to other microscope systems and has been made freely available to the light-sheet community. The tremendous amount of data routinely generated by light-sheet microscopy further requires novel strategies for data handling and storage. To complete the full imaging pipeline of our high-throughput microscope, we further elaborate on big data management from streaming of raw images up to stitching of 3-D datasets. The mesoscale neuroanatomy imaged at micron-scale resolution in those datasets allows characterization and quantification of neuronal projections in unsectioned mouse brains.
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Affiliation(s)
- M. Caroline Müllenbroich
- University of Florence, European Laboratory for Non-Linear Spectroscopy, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- University of Florence, Department of Physics and Astronomy, Via Sansone 1, Sesto Fiorentino 50019, Italy
| | - Ludovico Silvestri
- University of Florence, European Laboratory for Non-Linear Spectroscopy, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- National Institute of Optics, National Research Council, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
| | - Leonardo Onofri
- University of Florence, European Laboratory for Non-Linear Spectroscopy, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- University Campus Bio-Medico of Rome, v. Alvaro del Portillo 21, Roma 00128, Italy
| | - Irene Costantini
- University of Florence, European Laboratory for Non-Linear Spectroscopy, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
| | - Marcel van’t Hoff
- University of Florence, European Laboratory for Non-Linear Spectroscopy, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- University of Florence, Department of Physics and Astronomy, Via Sansone 1, Sesto Fiorentino 50019, Italy
| | - Leonardo Sacconi
- University of Florence, European Laboratory for Non-Linear Spectroscopy, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- National Institute of Optics, National Research Council, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
| | - Giulio Iannello
- University Campus Bio-Medico of Rome, v. Alvaro del Portillo 21, Roma 00128, Italy
| | - Francesco S. Pavone
- University of Florence, European Laboratory for Non-Linear Spectroscopy, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- University of Florence, Department of Physics and Astronomy, Via Sansone 1, Sesto Fiorentino 50019, Italy
- National Institute of Optics, National Research Council, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- International Centre for Computational Neurophotonics, Via Nello Carrara 1, Sesto Fiorentino 50019, Italy
- Address all correspondence to: Francesco S. Pavone, E-mail:
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86
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Yamanaka M, Saito K, Smith NI, Arai Y, Uegaki K, Yonemaru Y, Mochizuki K, Kawata S, Nagai T, Fujita K. Visible-wavelength two-photon excitation microscopy for fluorescent protein imaging. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:101202. [PMID: 26238663 DOI: 10.1117/1.jbo.20.10.101202] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2014] [Accepted: 03/25/2015] [Indexed: 05/21/2023]
Abstract
The simultaneous observation of multiple fluorescent proteins (FPs) by optical microscopy is revealing mechanisms by which proteins and organelles control a variety of cellular functions. Here we show the use of visible-light based two-photon excitation for simultaneously imaging multiple FPs. We demonstrated that multiple fluorescent targets can be concurrently excited by the absorption of two photons from the visible wavelength range and can be applied in multicolor fluorescence imaging. The technique also allows simultaneous single-photon excitation to offer simultaneous excitation of FPs across the entire range of visible wavelengths from a single excitation source. The calculation of point spread functions shows that the visible-wavelength two-photon excitation provides the fundamental improvement of spatial resolution compared to conventional confocal microscopy.
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Affiliation(s)
- Masahito Yamanaka
- Osaka University, Department of Applied Physics, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Kenta Saito
- Osaka University, The Institute of Scientific and Industrial Research, 8-1 Mihogaoka, Ibaraki, Osaka 565-0871, Japan
| | - Nicholas I Smith
- Osaka University, Immunology Frontier Research Center, 3-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Yoshiyuki Arai
- Osaka University, The Institute of Scientific and Industrial Research, 8-1 Mihogaoka, Ibaraki, Osaka 565-0871, Japan
| | - Kumiko Uegaki
- Osaka University, Department of Applied Physics, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Yasuo Yonemaru
- Osaka University, Department of Applied Physics, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Kentaro Mochizuki
- Osaka University, Department of Applied Physics, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Satoshi Kawata
- Osaka University, Department of Applied Physics, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Takeharu Nagai
- Osaka University, The Institute of Scientific and Industrial Research, 8-1 Mihogaoka, Ibaraki, Osaka 565-0871, Japan
| | - Katsumasa Fujita
- Osaka University, Department of Applied Physics, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
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Schoen SA, Miller LJ, Sullivan J. A Pilot Study of Integrated Listening Systems for Children With Sensory Processing Problems. JOURNAL OF OCCUPATIONAL THERAPY, SCHOOLS, & EARLY INTERVENTION 2015. [DOI: 10.1080/19411243.2015.1055418] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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88
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Vigil GD, Adami AJ, Ahmed T, Khan A, Chapman S, Andemariam B, Thrall RS, Howard SS. Label-free and depth resolved optical sectioning of iron-complex deposits in sickle cell disease splenic tissue by multiphoton microscopy. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:066001. [PMID: 26042382 DOI: 10.1117/1.jbo.20.6.066001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2014] [Accepted: 04/21/2015] [Indexed: 06/04/2023]
Abstract
Multiphoton microscopy (MPM) imaging of intrinsic two-photon excited fluorescence (TPEF) is performed on humanized sickle cell disease (SCD) mouse model splenic tissue. Distinct morphological and spectral features associated with SCD are identified and discussed in terms of diagnostic relevance. Specifically, spectrally unique splenic iron-complex deposits are identified by MPM; this finding is supported by TPEF spectroscopy and object size to standard histopathological methods. Further, iron deposits are found at higher concentrations in diseased tissue than in healthy tissue by all imaging methods employed here including MPM, and therefore, may provide a useful biomarker related to the disease state. These newly characterized biomarkers allow for further investigations of SCD in live animals as a means to gain insight into the mechanisms impacting immune dysregulation and organ malfunction, which are currently not well understood.
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Affiliation(s)
- Genevieve D Vigil
- University of Notre Dame, Department of Electrical Engineering, 275 Fitzpatrick Hall, Notre Dame, Indiana 46556, United States
| | - Alexander J Adami
- University of Connecticut Health Center, Department of Immunology, 263 Farmington Avenue, Farmington, Connecticut 06030-3710, United States
| | - Tahsin Ahmed
- University of Notre Dame, Department of Electrical Engineering, 275 Fitzpatrick Hall, Notre Dame, Indiana 46556, United States
| | - Aamir Khan
- University of Notre Dame, Department of Electrical Engineering, 275 Fitzpatrick Hall, Notre Dame, Indiana 46556, United States
| | - Sarah Chapman
- University of Notre Dame, Notre Dame Integrated Imaging Facility Histology Core, 400 D Friemann Life Science Center, Notre Dame, Indiana 46556, United States
| | - Biree Andemariam
- University of Connecticut Health Center, Department of Medicine, 263 Farmington Avenue, Farmington, Connecticut 06030-3710, United States
| | - Roger S Thrall
- University of Connecticut Health Center, Department of Immunology, 263 Farmington Avenue, Farmington, Connecticut 06030-3710, United States
| | - Scott S Howard
- University of Notre Dame, Department of Electrical Engineering, 275 Fitzpatrick Hall, Notre Dame, Indiana 46556, United States
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89
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Zhu Y, Choe CS, Ahlberg S, Meinke MC, Alexiev U, Lademann J, Darvin ME. Penetration of silver nanoparticles into porcine skin ex vivo using fluorescence lifetime imaging microscopy, Raman microscopy, and surface-enhanced Raman scattering microscopy. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:051006. [PMID: 25394476 DOI: 10.1117/1.jbo.20.5.051006] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2014] [Accepted: 10/21/2014] [Indexed: 06/04/2023]
Abstract
In order to investigate the penetration depth of silver nanoparticles (Ag NPs) inside the skin, porcine ears treated with Ag NPs are measured by two-photon tomography with a fluorescence lifetime imaging microscopy (TPT-FLIM) technique, confocal Raman microscopy (CRM), and surface-enhanced Raman scattering (SERS) microscopy. Ag NPs are coated with poly-N-vinylpyrrolidone and dispersed in pure water solutions. After the application of Ag NPs, porcine ears are stored in the incubator for 24 h at a temperature of 37°C. The TPT-FLIM measurement results show a dramatic decrease of the Ag NPs' signal intensity from the skin surface to a depth of 4 μm. Below 4 μm, the Ag NPs' signal continues to decline, having completely disappeared at 12 to 14 μm depth. CRM shows that the penetration depth of Ag NPs is 11.1 ± 2.1 μm. The penetration depth measured with a highly sensitive SERS microscopy reaches 15.6 ± 8.3 μm. Several results obtained with SERS show that the penetration depth of Ag NPs can exceed the stratum corneum (SC) thickness, which can be explained by both penetration of trace amounts of Ag NPs through the SC barrier and by the measurements inside the hair follicle, which cannot be excluded in the experiment.
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Affiliation(s)
- Yongjian Zhu
- Charité-Universitätsmedizin Berlin, Center of Experimental and Applied Cutaneous Physiology, Department of Dermatology, Venerology and Allergology, Charitéplatz 1, Berlin 10117, GermanybZhejiang University of Science and Technology, Department of Mechanic
| | - Chun-Sik Choe
- Charité-Universitätsmedizin Berlin, Center of Experimental and Applied Cutaneous Physiology, Department of Dermatology, Venerology and Allergology, Charitéplatz 1, Berlin 10117, GermanycKim Il Sung University, Department of Physics, Ryongnam-Dong, Taesong
| | - Sebastian Ahlberg
- Charité-Universitätsmedizin Berlin, Center of Experimental and Applied Cutaneous Physiology, Department of Dermatology, Venerology and Allergology, Charitéplatz 1, Berlin 10117, Germany
| | - Martina C Meinke
- Charité-Universitätsmedizin Berlin, Center of Experimental and Applied Cutaneous Physiology, Department of Dermatology, Venerology and Allergology, Charitéplatz 1, Berlin 10117, Germany
| | - Ulrike Alexiev
- Freie Universität Berlin, Department of Physics, Arnimallee 14, 14195 Berlin, Germany
| | - Juergen Lademann
- Charité-Universitätsmedizin Berlin, Center of Experimental and Applied Cutaneous Physiology, Department of Dermatology, Venerology and Allergology, Charitéplatz 1, Berlin 10117, Germany
| | - Maxim E Darvin
- Charité-Universitätsmedizin Berlin, Center of Experimental and Applied Cutaneous Physiology, Department of Dermatology, Venerology and Allergology, Charitéplatz 1, Berlin 10117, Germany
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Wilson JW, Degan S, Gainey CS, Mitropoulos T, Simpson MJ, Zhang JY, Warren WS. Comparing in vivo pump-probe and multiphoton fluorescence microscopy of melanoma and pigmented lesions. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:051012. [PMID: 25415567 PMCID: PMC4409034 DOI: 10.1117/1.jbo.20.5.051012] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2014] [Accepted: 10/30/2014] [Indexed: 05/23/2023]
Abstract
We demonstrate a multimodal approach that combines a pump-probe with confocal reflectance and multiphoton autofluorescence microscopy. Pump-probe microscopy has been proven to be of great value in analyzing thin tissue sections of pigmented lesions, as it produces molecular contrast which is inaccessible by other means. However, the higher optical intensity required to overcome scattering in thick tissue leads to higher-order nonlinearities in the optical response of melanin (e.g., two-photon pump and one-photon probe) that present additional challenges for interpreting the data. We show that analysis of pigment composition in vivo must carefully account for signal terms that are nonlinear with respect to the pump and probe intensities. We find that pump-probe imaging gives useful contrast for pigmented structures over a large range of spatial scales (100 μm to 1 cm), making it a potentially useful tool for tracking the progression of pigmented lesions without the need to introduce exogenous contrast agents.
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Affiliation(s)
- Jesse W. Wilson
- Duke University, Department of Chemistry, Box 90354, Durham, North Carolina 27708-0354, United States
| | - Simone Degan
- Duke University, Department of Chemistry, Box 90354, Durham, North Carolina 27708-0354, United States
- Duke University Medical Center, Department of Radiology, Box 3808, Durham, North Carolina 27710, United States
| | - Christina S. Gainey
- Duke University, Department of Chemistry, Box 90354, Durham, North Carolina 27708-0354, United States
| | - Tanya Mitropoulos
- Duke University, Department of Chemistry, Box 90354, Durham, North Carolina 27708-0354, United States
| | - Mary Jane Simpson
- Duke University, Department of Chemistry, Box 90354, Durham, North Carolina 27708-0354, United States
| | - Jennifer Y. Zhang
- Duke University Medical Center, Department of Dermatology, DUMC 3135, Durham, North Carolina 27710, United States
| | - Warren S. Warren
- Duke University, Department of Chemistry, Box 90354, Durham, North Carolina 27708-0354, United States
- Duke University Medical Center, Department of Radiology, Box 3808, Durham, North Carolina 27710, United States
- Duke University, Department of Biomedical Engineering, Box 90281, Durham, North Carolina 27708, United States
- Address all correspondence to: Warren S. Warren, E-mail:
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Spitler R, Ho H, Norpetlian F, Kong X, Jiang J, Yokomori K, Andersen B, Boss GR, Berns MW. Combination of low level light therapy and nitrosyl-cobinamide accelerates wound healing. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:051022. [PMID: 25562608 PMCID: PMC4284311 DOI: 10.1117/1.jbo.20.5.051022] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2014] [Accepted: 12/04/2014] [Indexed: 06/04/2023]
Abstract
Low level light therapy (LLLT) has numerous therapeutic benefits, including improving wound healing, but the precise mechanisms involved are not well established; in particular, the underlying role of cytochrome C oxidase (C-ox) as the primary photoacceptor and the associated biochemical mechanisms still require further investigation. We previously showed the nitric oxide (NO) donating drug nitrosyl-cobinamide (NO-Cbi) enhances wound healing through a cGMP/cGMP-dependent protein kinase/ERK1/2 mechanism. Here, we show that the combination of LLLT and NO-Cbi markedly improves wound healing compared to either treatment alone. LLLT-enhanced wound healing proceeded through an electron transport chain-C-ox-dependent mechanism with a reduction of reactive oxygen species and increased adenosine triphosphate production. C-ox was validated as the primary photoacceptor by three observations: increased oxygen consumption, reduced wound healing in the presence of sodium azide, and disassociation of cyanide, a known C-ox ligand, following LLLT. We conclude that LLLT and NO-Cbi accelerate wound healing through two independent mechanisms, the electron transport chain-C-ox pathway and cGMP signaling, respectively, with both resulting in ERK1/2 activation.
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Affiliation(s)
- Ryan Spitler
- University of California Irvine, Irvine, California 92612 United States
| | - Hsiang Ho
- University of California Irvine, Irvine, California 92612 United States
| | | | - Xiangduo Kong
- University of California Irvine, Irvine, California 92612 United States
| | - Jingjing Jiang
- University of California San Diego, La Jolla, California 92093 United States
| | - Kyoko Yokomori
- University of California Irvine, Irvine, California 92612 United States
| | - Bogi Andersen
- University of California Irvine, Irvine, California 92612 United States
| | - Gerry R. Boss
- University of California San Diego, La Jolla, California 92093 United States
| | - Michael W. Berns
- University of California Irvine, Irvine, California 92612 United States
- University of California San Diego, La Jolla, California 92093 United States
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92
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Asnet Mary J, Paramasivan R, Shenbagarathai R. Identification of sequence motifs involved in Dengue virus-host interactions. J Biomol Struct Dyn 2015; 34:676-87. [PMID: 25905427 DOI: 10.1080/07391102.2015.1042914] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
Dengue fever is a rapidly spreading mosquito-borne virus infection, which remains a serious global public health problem. As there is no specific treatment or commercial vaccine available for effective control of the disease, the attempts on developing novel control strategies are underway. Viruses utilize the surface receptor proteins of host to enter into the cells. Though various proteins were said to be receptors of Dengue virus (DENV) using Virus Overlay Protein Binding Assay, the precise interaction between DENV and host is not explored. Understanding the structural features of domain III envelope glycoprotein would help in developing efficient antiviral inhibitors. Therefore, an attempt was made to identify the sequence motifs present in domain III envelope glycoprotein of Dengue virus. Computational analysis revealed that the NGR motif is present in the domain III envelope glycoprotein of DENV-1 and DENV-3. Similarly, DENV-1, DENV-2 and DENV-4 were found to contain Yxxphi motif which is a tyrosine-based sorting signal responsible for the interaction with a mu subunit of adaptor protein complex. High-throughput virtual screening resulted in five compounds as lead molecules based on glide score, which ranges from -4.664 to -6.52 kcal/Mol. This computational prediction provides an additional tool for understanding the virus-host interactions and helps to identify potential targets in the host. Further, experimental evidence is warranted to confirm the virus-host interactions and also inhibitory activity of reported lead compounds.
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Affiliation(s)
- J Asnet Mary
- a Department of Zoology , Fatima College , Madurai , Tamil Nadu 625018 , India.,b PG & Research Department of Zoology and Biotechnology , Lady Doak College , Madurai , Tamil Nadu 625002 , India
| | - R Paramasivan
- c Centre for Research in Medical Entomology , Madurai , India
| | - R Shenbagarathai
- b PG & Research Department of Zoology and Biotechnology , Lady Doak College , Madurai , Tamil Nadu 625002 , India
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93
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Jonnalagadda JB, Rivero IV, Dertien JS. In vitrochondrocyte behavior on porous biodegradable poly (e-caprolactone)/polyglycolic acid scaffolds for articular chondrocyte adhesion and proliferation. JOURNAL OF BIOMATERIALS SCIENCE-POLYMER EDITION 2015; 26:401-19. [DOI: 10.1080/09205063.2015.1015864] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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94
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Sharma N, Kim JH, Sodhi SS, Luong DH, Kim SW, Oh SJ, Jeong DK. Differentiation dynamics of mammary epithelial stem cells from Korean holstein dairy cattle under ECM-free conditions. J Biomol Struct Dyn 2015; 33:2633-54. [DOI: 10.1080/07391102.2014.1003197] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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95
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Wang H, Lenglet C, Akkin T. Structure tensor analysis of serial optical coherence scanner images for mapping fiber orientations and tractography in the brain. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:036003. [PMID: 25741662 PMCID: PMC4350401 DOI: 10.1117/1.jbo.20.3.036003] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2014] [Accepted: 02/19/2015] [Indexed: 05/05/2023]
Abstract
Quantitative investigations of fiber orientation and structural connectivity at microscopic resolution have led to great challenges for current neuroimaging techniques. Here, we present a structure tensor (ST) analysis of ex vivo rat brain images acquired by a multicontrast (MC) serial optical coherence scanner. The ST considers the gradients of images in local neighbors to generate a matrix whose eigen-decomposition can estimate the local features such as the edges, anisotropy, and orientation of tissue constituents. This computational analysis is applied on the conventional- and polarization-based contrasts of optical coherence tomography. The three-dimensional (3-D) fiber orientation maps are computed from the image stacks of sequential scans both at mesoresolution for a global view and at high-resolution for the details. The computational orientation maps demonstrate a good agreement with the optic axis orientation contrast which measures the in-plane fiber orientation. Moreover, tractography is implemented using the directional information extracted from the 3-D ST. The study provides a unique opportunity to leverage MC high-resolution information to map structural connectivity of the whole brain.
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Affiliation(s)
- Hui Wang
- University of Minnesota, Department of Biomedical Engineering, Minneapolis, Minnesota 55455, United States
- Address all correspondence to: Hui Wang, E-mail:
| | - Christophe Lenglet
- University of Minnesota, Center for Magnetic Resonance Research, Department of Radiology, Minneapolis, Minnesota 55455, United States
| | - Taner Akkin
- University of Minnesota, Department of Biomedical Engineering, Minneapolis, Minnesota 55455, United States
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96
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Wei SC, Chuang TL, Wang DS, Lu HH, Gu FX, Sung KB, Lin CW. Tip-enhanced fluorescence with radially polarized illumination for monitoring loop-mediated isothermal amplification on hepatitis C virus cDNA. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:27005. [PMID: 25679746 DOI: 10.1117/1.jbo.20.2.027005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2014] [Accepted: 01/12/2015] [Indexed: 06/04/2023]
Abstract
A tip nanobiosensor for monitoring DNA replication was presented. The effects of excitation power and polarization on tip-enhanced fluorescence (TEF) were assessed with the tip immersed in fluorescein isothiocyanate solution first. The photon count rose on average fivefold with radially polarized illumination at 50 mW. We then used polymerase-functionalized tips for monitoring loop-mediated isothermal amplification on Hepatitis C virus cDNA. The amplicon-SYBR® Green I complex was detected and compared to real-time loop-mediated isothermal amplification. The signals of the reaction using 4 and 0.004 ng∕μl templates were detected 10 and 30 min earlier, respectively. The results showed the potential of TEF in developing a nanobiosensor for real-time DNA amplification.
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Affiliation(s)
- Shih-Chung Wei
- National Taiwan University, Institute of Biomedical Electronics and Bioinformatics, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan
| | - Tsung-Liang Chuang
- National Taiwan University, Institute of Biomedical Engineering, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan
| | - Da-Shin Wang
- National Taiwan University, Institute of Biomedical Engineering, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan
| | - Hui-Hsin Lu
- National Taiwan University, Institute of Biomedical Engineering, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan
| | - Frank X Gu
- University of Waterloo, Department of Chemical Engineering, 200 University Avenue West, Waterloo, Ontario N2L 3G1, Canada
| | - Kung-Bin Sung
- National Taiwan University, Institute of Biomedical Electronics and Bioinformatics, No. 1, Section 4, Roosevelt Road, Taipei 10617, TaiwandNational Taiwan University, Molecular Imaging Center, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan
| | - Chii-Wann Lin
- National Taiwan University, Institute of Biomedical Electronics and Bioinformatics, No. 1, Section 4, Roosevelt Road, Taipei 10617, TaiwanbNational Taiwan University, Institute of Biomedical Engineering, No. 1, Section 4, Roosevelt Road, Taipei 10617, Tai
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97
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Bodnar AG. Cellular and molecular mechanisms of negligible senescence: insight from the sea urchin. INVERTEBR REPROD DEV 2015; 59:23-27. [PMID: 26136616 PMCID: PMC4463994 DOI: 10.1080/07924259.2014.938195] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2014] [Accepted: 05/23/2014] [Indexed: 02/05/2023]
Abstract
Sea urchins exhibit a very different life history from humans and short-lived model animals and therefore provide the opportunity to gain new insight into the complex process of aging. Sea urchins grow indeterminately, regenerate damaged appendages, and reproduce throughout their lifespan. Some species show no increase in mortality rate at advanced ages. Nevertheless, different species of sea urchins have very different reported lifespans ranging from 4 to more than 100 years, thus providing a unique model to investigate the molecular, cellular, and physiological mechanisms underlying both lifespan determination and negligible senescence. Studies to date have demonstrated maintenance of telomeres, maintenance of antioxidant and proteasome enzyme activities, and little accumulation of oxidative cellular damage with age in tissues of sea urchin species with different lifespans. Gene expression studies indicate that key cellular pathways involved in energy metabolism, protein homeostasis, and tissue regeneration are maintained with age. Taken together, these studies suggest that long-term maintenance of mechanisms that sustain tissue homeostasis and regenerative capacity is essential for indeterminate growth and negligible senescence, and a better understanding of these processes may suggest effective strategies to mitigate the degenerative decline in human tissues with age.
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98
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Selfridge A, Hyun N, Chiang CC, Reyna SM, Weissmiller AM, Shi LZ, Preece D, Mobley WC, Berns MW. Rat embryonic hippocampus and induced pluripotent stem cell derived cultured neurons recover from laser-induced subaxotomy. NEUROPHOTONICS 2015; 2:015006. [PMID: 26157985 PMCID: PMC4487718 DOI: 10.1117/1.nph.2.1.015006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2014] [Accepted: 01/12/2015] [Indexed: 06/04/2023]
Abstract
Axonal injury and stress have long been thought to play a pathogenic role in a variety of neurodegenerative diseases. However, a model for studying single-cell axonal injury in mammalian cells and the processes of repair has not been established. The purpose of this study was to examine the response of neuronal growth cones to laser-induced axonal damage in cultures of embryonic rat hippocampal neurons and induced pluripotent stem cell (iPSC) derived human neurons. A 532-nm pulsed [Formula: see text] picosecond laser was focused to a diffraction limited spot at a precise location on an axon using a laser energy/power that did not rupture the cell membrane (subaxotomy). Subsequent time series images were taken to follow axonal recovery and growth cone dynamics. After laser subaxotomy, axons thinned at the damage site and initiated a dynamic cytoskeletal remodeling process to restore axonal thickness. The growth cone was observed to play a role in the repair process in both hippocampal and iPSC-derived neurons. Immunofluorescence staining confirmed structural tubulin damage and revealed initial phases of actin-based cytoskeletal remodeling at the damage site. The results of this study indicate that there is a repeatable and cross-species repair response of axons and growth cones after laser-induced damage.
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Affiliation(s)
- Aaron Selfridge
- University of California, San Diego, Department of Bioengineering, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Nicholas Hyun
- University of California, San Diego, Department of Bioengineering, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Chai-Chun Chiang
- University of California, San Diego, Department of Neurosciences, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Sol M. Reyna
- University of California, San Diego, Department of Biomedical Sciences, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - April M. Weissmiller
- University of California, San Diego, Department of Neurosciences, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Linda Z. Shi
- University of California, San Diego, Institute of Engineering in Medicine, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Daryl Preece
- University of California, San Diego, Department of NanoEngineering, 9500 Gilman Drive La Jolla, California 92093, United States
| | - William C. Mobley
- University of California, San Diego, Department of Neurosciences, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Michael W. Berns
- University of California, San Diego, Department of Bioengineering, 9500 Gilman Drive, La Jolla, California 92093, United States
- University of California, San Diego, Institute of Engineering in Medicine, 9500 Gilman Drive, La Jolla, California 92093, United States
- University of California, Irvine, Beckman Laser Institute, 1002 Health Sciences Road, Irvine, California 92612, United States
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99
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Brázová T, Poddubnaya LG, Ramírez Miss N, Hanzelová V. Ultrastructure and chemical composition of the proboscis hooks of Acanthocephalus lucii (Müller, 1776) (Acanthocephala: Palaeacanthocephala) using X-ray elemental analysis. Folia Parasitol (Praha) 2014. [DOI: 10.14411/fp.2014.053] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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100
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Sullivan T, McGuinness K, O'Connor NE, Regan F. Characterization and anti-settlement aspects of surface micro-structures from Cancer pagurus. BIOINSPIRATION & BIOMIMETICS 2014; 9:046003. [PMID: 25291692 DOI: 10.1088/1748-3182/9/4/046003] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Tuning surface and material properties to inhibit or prevent settlement and attachment of microorganisms is of interest for applications such as antifouling technologies. Here, optimization of nano- and microscale structures on immersed surfaces can be utilized to improve cell removal while reducing adhesion strength and the likelihood of initial cellular attachment. Engineered surfaces capable of controlling cellular behaviour under natural conditions are challenging to design due to the diversity of attaching cell types in environments such as marine waters, where many variations in cell shape, size and adhesion strategy exist. Nevertheless, understanding interactions between a cell and a potential substrate for adhesion, including topographically driven settlement cues, offers a route to designing surfaces capable of controlling cell settlement. Biomimetic design of artificial surfaces, based upon microscale features from natural surfaces, can be utilized as model surfaces to understand cell-surface interactions. The microscale surface features of the carapace from the crustacean Cancer pagurus has been previously found to influence the rate of attachment of particular organisms when compared to smooth controls. However, the nature of microscale topographic features from C. pagurus have not been examined in sufficient detail to allow design of biomimetic surfaces. In this work, the spatial distribution, chemical composition, size and shape descriptors of microscale surface features from C. pagurus are characterized in detail for the first time. Additionally, the influence of topography from C. pagurus on the settlement of marine diatoms is examined under field conditions.
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Affiliation(s)
- T Sullivan
- MESTECH: Marine and Environmental Sensing Technology Hub, Dublin City University, Glasnevin, Dublin 9, Ireland
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