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For: Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GLG, Wides R, Halpern A, Li PW, Sutton GG, Nadeau J, Salzberg SL, Holt RA, Kodira CD, Lu F, Chen L, Deng Z, Evangelista CC, Gan W, Heiman TJ, Li J, Li Z, Merkulov GV, Milshina NV, Naik AK, Qi R, Shue BC, Wang A, Wang J, Wang X, Yan X, Ye J, Yooseph S, Zhao Q, Zheng L, Zhu SC, Biddick K, Bolanos R, Delcher AL, Dew IM, Fasulo D, Flanigan MJ, Huson DH, Kravitz SA, Miller JR, Mobarry CM, Reinert K, Remington KA, Zhang Q, Zheng XH, Nusskern DR, Lai Z, Lei Y, Zhong W, Yao A, Guan P, Ji RR, Gu Z, Wang ZY, Zhong F, Xiao C, Chiang CC, Yandell M, Wortman JR, Amanatides PG, Hladun SL, Pratts EC, Johnson JE, Dodson KL, Woodford KJ, Evans CA, Gropman B, Rusch DB, Venter E, Wang M, Smith TJ, Houck JT, Tompkins DE, Haynes C, Jacob D, Chin SH, Allen DR, Dahlke CE, Sanders R, Li K, Liu X, Levitsky AA, Majoros WH, Chen Q, Xia AC, Lopez JR, Donnelly MT, Newman MH, Glodek A, Kraft CL, Nodell M, Ali F, An HJ, Baldwin-Pitts D, Beeson KY, Cai S, Carnes M, Carver A, Caulk PM, Center A, Chen YH, Cheng ML, Coyne MD, Crowder M, Danaher S, Davenport LB, Desilets R, Dietz SM, Doup L, Dullaghan P, Ferriera S, Fosler CR, Gire HC, Gluecksmann A, Gocayne JD, Gray J, Hart B, Haynes J, Hoover J, Howland T, Ibegwam C, Jalali M, Johns D, Kline L, Ma DS, MacCawley S, Magoon A, Mann F, May D, McIntosh TC, Mehta S, Moy L, Moy MC, Murphy BJ, Murphy SD, Nelson KA, Nuri Z, Parker KA, Prudhomme AC, Puri VN, Qureshi H, Raley JC, Reardon MS, Regier MA, Rogers YHC, Romblad DL, Schutz J, Scott JL, Scott R, Sitter CD, Smallwood M, Sprague AC, Stewart E, Strong RV, Suh E, Sylvester K, Thomas R, Tint NN, Tsonis C, Wang G, Wang G, Williams MS, Williams SM, Windsor SM, Wolfe K, Wu MM, Zaveri J, Chaturvedi K, Gabrielian AE, Ke Z, Sun J, Subramanian G, Venter JC, Pfannkoch CM, Barnstead M, Stephenson LD. A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Science 2002;296:1661-71. [PMID: 12040188 DOI: 10.1126/science.1069193] [Citation(s) in RCA: 300] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Number Cited by Other Article(s)
51
Velazquez R, Ash JA, Powers BE, Kelley CM, Strawderman M, Luscher ZI, Ginsberg SD, Mufson EJ, Strupp BJ. Maternal choline supplementation improves spatial learning and adult hippocampal neurogenesis in the Ts65Dn mouse model of Down syndrome. Neurobiol Dis 2013;58:92-101. [PMID: 23643842 PMCID: PMC4029409 DOI: 10.1016/j.nbd.2013.04.016] [Citation(s) in RCA: 94] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2012] [Revised: 04/12/2013] [Accepted: 04/23/2013] [Indexed: 11/25/2022]  Open
52
Didion JP, de Villena FPM. Deconstructing Mus gemischus: advances in understanding ancestry, structure, and variation in the genome of the laboratory mouse. Mamm Genome 2013;24:1-20. [PMID: 23223940 PMCID: PMC4034049 DOI: 10.1007/s00335-012-9441-z] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2012] [Accepted: 11/05/2012] [Indexed: 01/26/2023]
53
Luo H, Arndt W, Zhang Y, Shi G, Alekseyev M, Tang J, Hughes AL, Friedman R. Phylogenetic analysis of genome rearrangements among five mammalian orders. Mol Phylogenet Evol 2012;65:871-82. [PMID: 22929217 PMCID: PMC4425404 DOI: 10.1016/j.ympev.2012.08.008] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2012] [Revised: 08/11/2012] [Accepted: 08/13/2012] [Indexed: 01/16/2023]
54
Tu-Sekine B, Goldschmidt H, Petro E, Raben DM. Diacylglycerol kinase θ: regulation and stability. Adv Biol Regul 2012;53:118-26. [PMID: 23266086 DOI: 10.1016/j.jbior.2012.09.007] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2012] [Accepted: 09/10/2012] [Indexed: 10/27/2022]
55
Azim S, Banday AR, Sarwar T, Tabish M. Alternatively spliced variants of gamma-subunit of muscle-type acetylcholine receptor in fetal and adult skeletal muscle of mouse. Cell Mol Neurobiol 2012;32:957-63. [PMID: 22488527 PMCID: PMC11498459 DOI: 10.1007/s10571-012-9838-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2011] [Accepted: 03/23/2012] [Indexed: 11/30/2022]
56
Why bioimage informatics matters. Nat Methods 2012;9:659-60. [DOI: 10.1038/nmeth.2024] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
57
Li J, Akagi K, Hu Y, Trivett AL, Hlynialuk CJ, Swing DA, Volfovsky N, Morgan TC, Golubeva Y, Stephens RM, Smith DE, Symer DE. Mouse endogenous retroviruses can trigger premature transcriptional termination at a distance. Genome Res 2012;22:870-84. [PMID: 22367191 PMCID: PMC3337433 DOI: 10.1101/gr.130740.111] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2011] [Accepted: 02/09/2012] [Indexed: 01/15/2023]
58
Komissarov AS, Gavrilova EV, Demin SJ, Ishov AM, Podgornaya OI. Tandemly repeated DNA families in the mouse genome. BMC Genomics 2011;12:531. [PMID: 22035034 PMCID: PMC3218096 DOI: 10.1186/1471-2164-12-531] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2011] [Accepted: 10/28/2011] [Indexed: 12/23/2022]  Open
59
Keck-Wherley J, Grover D, Bhattacharyya S, Xu X, Holman D, Lombardini ED, Verma R, Biswas R, Galdzicki Z. Abnormal microRNA expression in Ts65Dn hippocampus and whole blood: contributions to Down syndrome phenotypes. Dev Neurosci 2011;33:451-67. [PMID: 22042248 PMCID: PMC3254042 DOI: 10.1159/000330884] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2011] [Accepted: 07/06/2011] [Indexed: 12/22/2022]  Open
60
Keane TM, Goodstadt L, Danecek P, White MA, Wong K, Yalcin B, Heger A, Agam A, Slater G, Goodson M, Furlotte NA, Eskin E, Nellåker C, Whitley H, Cleak J, Janowitz D, Hernandez-Pliego P, Edwards A, Belgard TG, Oliver PL, McIntyre RE, Bhomra A, Nicod J, Gan X, Yuan W, van der Weyden L, Steward CA, Bala S, Stalker J, Mott R, Durbin R, Jackson IJ, Czechanski A, Guerra-Assunção JA, Donahue LR, Reinholdt LG, Payseur BA, Ponting CP, Birney E, Flint J, Adams DJ. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature 2011;477:289-94. [PMID: 21921910 PMCID: PMC3276836 DOI: 10.1038/nature10413] [Citation(s) in RCA: 1190] [Impact Index Per Article: 85.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2011] [Accepted: 08/05/2011] [Indexed: 01/16/2023]
61
van der Weyden L, White JK, Adams DJ, Logan DW. The mouse genetics toolkit: revealing function and mechanism. Genome Biol 2011;12:224. [PMID: 21722353 PMCID: PMC3218837 DOI: 10.1186/gb-2011-12-6-224] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]  Open
62
Piskol R, Stephan W. The role of the effective population size in compensatory evolution. Genome Biol Evol 2011;3:528-38. [PMID: 21680889 PMCID: PMC3140890 DOI: 10.1093/gbe/evr057] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
63
Lu ZH, di Domenico A, Wright SH, Knight PA, Whitelaw CBA, Pemberton AD. Strain-specific copy number variation in the intelectin locus on the 129 mouse chromosome 1. BMC Genomics 2011;12:110. [PMID: 21324158 PMCID: PMC3048546 DOI: 10.1186/1471-2164-12-110] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2010] [Accepted: 02/16/2011] [Indexed: 01/12/2023]  Open
64
Yang L, Liu J, Liu M, Qian M, Zhang M, Hu H. Identification of fatty acid synthase from the Pacific white shrimp, Litopenaeus vannamei and its specific expression profiles during white spot syndrome virus infection. FISH & SHELLFISH IMMUNOLOGY 2011;30:744-749. [PMID: 21199673 DOI: 10.1016/j.fsi.2010.12.026] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2010] [Revised: 12/24/2010] [Accepted: 12/24/2010] [Indexed: 05/30/2023]
65
George JW, Dille EA, Heckert LL. Current concepts of follicle-stimulating hormone receptor gene regulation. Biol Reprod 2011;84:7-17. [PMID: 20739665 PMCID: PMC4480823 DOI: 10.1095/biolreprod.110.085043] [Citation(s) in RCA: 86] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2010] [Revised: 05/04/2010] [Accepted: 08/16/2010] [Indexed: 12/25/2022]  Open
66
Kingsley CB. Identification of causal sequence variants of disease in the next generation sequencing era. Methods Mol Biol 2011;700:37-46. [PMID: 21204025 DOI: 10.1007/978-1-61737-954-3_3] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
67
Sterling KM, Ahearn GA. Glucose and fructose uptake by Limulus polyphemus hepatopancreatic brush border and basolateral membrane vesicles: evidence for Na+-dependent sugar transport activity. J Comp Physiol B 2010;181:467-75. [PMID: 21184084 DOI: 10.1007/s00360-010-0543-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2010] [Revised: 11/29/2010] [Accepted: 12/02/2010] [Indexed: 11/28/2022]
68
Arlt A, Schäfer H. Role of the immediate early response 3 (IER3) gene in cellular stress response, inflammation and tumorigenesis. Eur J Cell Biol 2010;90:545-52. [PMID: 21112119 DOI: 10.1016/j.ejcb.2010.10.002] [Citation(s) in RCA: 124] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2010] [Revised: 10/01/2010] [Accepted: 10/04/2010] [Indexed: 10/18/2022]  Open
69
Dedieu A, Gaillard JC, Pourcher T, Darrouzet E, Armengaud J. Revisiting iodination sites in thyroglobulin with an organ-oriented shotgun strategy. J Biol Chem 2010;286:259-69. [PMID: 20978121 DOI: 10.1074/jbc.m110.159483] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
70
Noonan JP, McCallion AS. Genomics of long-range regulatory elements. Annu Rev Genomics Hum Genet 2010;11:1-23. [PMID: 20438361 DOI: 10.1146/annurev-genom-082509-141651] [Citation(s) in RCA: 111] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
71
Hutchins LN, Ding Y, Szatkiewicz JP, Von Smith R, Yang H, de Villena FPM, Churchill GA, Graber JH. CGDSNPdb: a database resource for error-checked and imputed mouse SNPs. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 2010;2010:baq008. [PMID: 20624716 PMCID: PMC2911843 DOI: 10.1093/database/baq008] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
72
Kirby A, Kang HM, Wade CM, Cotsapas C, Kostem E, Han B, Furlotte N, Kang EY, Rivas M, Bogue MA, Frazer KA, Johnson FM, Beilharz EJ, Cox DR, Eskin E, Daly MJ. Fine mapping in 94 inbred mouse strains using a high-density haplotype resource. Genetics 2010;185:1081-95. [PMID: 20439770 PMCID: PMC2907194 DOI: 10.1534/genetics.110.115014] [Citation(s) in RCA: 91] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2010] [Accepted: 04/23/2010] [Indexed: 12/13/2022]  Open
73
Paulsson AK, Franklin S, Mitchell-Jordan SA, Ren S, Wang Y, Vondriska TM. Post-translational regulation of calsarcin-1 during pressure overload-induced cardiac hypertrophy. J Mol Cell Cardiol 2010;48:1206-14. [PMID: 20170660 PMCID: PMC2866759 DOI: 10.1016/j.yjmcc.2010.02.009] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/03/2009] [Revised: 02/05/2010] [Accepted: 02/07/2010] [Indexed: 11/26/2022]
74
Chen Y, Cunningham F, Rios D, McLaren WM, Smith J, Pritchard B, Spudich GM, Brent S, Kulesha E, Marin-Garcia P, Smedley D, Birney E, Flicek P. Ensembl variation resources. BMC Genomics 2010;11:293. [PMID: 20459805 PMCID: PMC2894800 DOI: 10.1186/1471-2164-11-293] [Citation(s) in RCA: 101] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2009] [Accepted: 05/11/2010] [Indexed: 01/13/2023]  Open
75
Quinlan AR, Clark RA, Sokolova S, Leibowitz ML, Zhang Y, Hurles ME, Mell JC, Hall IM. Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome. Genome Res 2010;20:623-35. [PMID: 20308636 DOI: 10.1101/gr.102970.109] [Citation(s) in RCA: 204] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
76
Spindler KR, Welton AR, Lim ES, Duvvuru S, Althaus IW, Imperiale JE, Daoud AI, Chesler EJ. The major locus for mouse adenovirus susceptibility maps to genes of the hematopoietic cell surface-expressed LY6 family. JOURNAL OF IMMUNOLOGY (BALTIMORE, MD. : 1950) 2010;184:3055-62. [PMID: 20164425 PMCID: PMC2832721 DOI: 10.4049/jimmunol.0903363] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
77
Rachidi M, Lopes C. Molecular and cellular mechanisms elucidating neurocognitive basis of functional impairments associated with intellectual disability in Down syndrome. AMERICAN JOURNAL ON INTELLECTUAL AND DEVELOPMENTAL DISABILITIES 2010;115:83-112. [PMID: 20441388 DOI: 10.1352/1944-7558-115.2.83] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2008] [Accepted: 11/05/2009] [Indexed: 05/29/2023]
78
PCR prescreen for genotyping the Ts65Dn mouse model of Down syndrome. Biotechniques 2010;48:35-8. [PMID: 20095097 DOI: 10.2144/000113342] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
79
Cramer NP, Best TK, Stoffel M, Siarey RJ, Galdzicki Z. GABAB–GIRK2-Mediated Signaling in Down Syndrome. GABABRECEPTOR PHARMACOLOGY - A TRIBUTE TO NORMAN BOWERY 2010;58:397-426. [DOI: 10.1016/s1054-3589(10)58015-3] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
80
Jun J, Mandoiu II, Nelson CE. Identification of mammalian orthologs using local synteny. BMC Genomics 2009;10:630. [PMID: 20030836 PMCID: PMC2807883 DOI: 10.1186/1471-2164-10-630] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2009] [Accepted: 12/23/2009] [Indexed: 11/10/2022]  Open
81
Brosius J. The fragmented gene. Ann N Y Acad Sci 2009;1178:186-93. [PMID: 19845638 DOI: 10.1111/j.1749-6632.2009.05004.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
82
Folic Acid Supplementation Modifies β-Adrenoceptor–Mediated In Vitro Lipolysis of Obese/Diabetic (+db/+db) Mice. Exp Biol Med (Maywood) 2009;234:1047-55. [DOI: 10.3181/0902-rm-44] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]  Open
83
Wykes SM, Krawetz SA. Conservation of the PRM1→PRM2→TNP2 Domain. ACTA ACUST UNITED AC 2009;14:359-67. [PMID: 14756422 DOI: 10.1080/10425170310001599453] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
84
Patterson D. Molecular genetic analysis of Down syndrome. Hum Genet 2009;126:195-214. [PMID: 19526251 DOI: 10.1007/s00439-009-0696-8] [Citation(s) in RCA: 157] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2009] [Accepted: 05/29/2009] [Indexed: 12/18/2022]
85
Costa V, Casamassimi A, Roberto R, Gianfrancesco F, Matarazzo MR, D'Urso M, D'Esposito M, Rocchi M, Ciccodicola A. DDX11L: a novel transcript family emerging from human subtelomeric regions. BMC Genomics 2009;10:250. [PMID: 19476624 PMCID: PMC2705379 DOI: 10.1186/1471-2164-10-250] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2008] [Accepted: 05/28/2009] [Indexed: 01/23/2023]  Open
86
Su Z, Ishimori N, Chen Y, Leiter EH, Churchill GA, Paigen B, Stylianou IM. Four additional mouse crosses improve the lipid QTL landscape and identify Lipg as a QTL gene. J Lipid Res 2009;50:2083-94. [PMID: 19436067 DOI: 10.1194/jlr.m900076-jlr200] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
87
Commins J, Toft C, Fares MA. Computational biology methods and their application to the comparative genomics of endocellular symbiotic bacteria of insects. Biol Proced Online 2009;11:52-78. [PMID: 19495914 PMCID: PMC3055744 DOI: 10.1007/s12575-009-9004-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2009] [Accepted: 02/17/2009] [Indexed: 12/02/2022]  Open
88
Reilly KM. Brain tumor susceptibility: the role of genetic factors and uses of mouse models to unravel risk. Brain Pathol 2009;19:121-31. [PMID: 19076777 PMCID: PMC2761018 DOI: 10.1111/j.1750-3639.2008.00236.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2008] [Accepted: 10/07/2008] [Indexed: 02/03/2023]  Open
89
Tessarollo L, Palko ME, Akagi K, Coppola V. Gene targeting in mouse embryonic stem cells. Methods Mol Biol 2009;530:141-64. [PMID: 19266325 PMCID: PMC7282145 DOI: 10.1007/978-1-59745-471-1_8] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
90
Grubb SC, Maddatu TP, Bult CJ, Bogue MA. Mouse phenome database. Nucleic Acids Res 2008;37:D720-30. [PMID: 18987003 PMCID: PMC2686531 DOI: 10.1093/nar/gkn778] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]  Open
91
Lu TC, Meng LB, Yang CP, Liu GF, Liu GJ, Ma W, Wang BC. A shotgun phosphoproteomics analysis of embryos in germinated maize seeds. PLANTA 2008;228:1029-41. [PMID: 18726113 DOI: 10.1007/s00425-008-0805-2] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2008] [Accepted: 07/31/2008] [Indexed: 05/09/2023]
92
Yang X, Yang H, Zhou G, Zhao GP. Infectious Disease in the Genomic Era. Annu Rev Genomics Hum Genet 2008;9:21-48. [DOI: 10.1146/annurev.genom.9.081307.164428] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
93
Mittal R, Sharma S, Chhibber S, Harjai K. Iron dictates the virulence of Pseudomonas aeruginosa in urinary tract infections. J Biomed Sci 2008;15:731-41. [DOI: 10.1007/s11373-008-9274-7] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2008] [Accepted: 07/25/2008] [Indexed: 11/21/2022]  Open
94
Holt RA, Jones SJM. The new paradigm of flow cell sequencing. Genome Res 2008;18:839-46. [PMID: 18519653 DOI: 10.1101/gr.073262.107] [Citation(s) in RCA: 150] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
95
Su WL, Modrek B, GuhaThakurta D, Edwards S, Shah JK, Kulkarni AV, Russell A, Schadt EE, Johnson JM, Castle JC. Exon and junction microarrays detect widespread mouse strain- and sex-bias expression differences. BMC Genomics 2008;9:273. [PMID: 18533039 PMCID: PMC2432077 DOI: 10.1186/1471-2164-9-273] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2007] [Accepted: 06/04/2008] [Indexed: 12/22/2022]  Open
96
Akagi K, Li J, Stephens RM, Volfovsky N, Symer DE. Extensive variation between inbred mouse strains due to endogenous L1 retrotransposition. Genome Res 2008;18:869-80. [PMID: 18381897 PMCID: PMC2413154 DOI: 10.1101/gr.075770.107] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2007] [Accepted: 03/27/2008] [Indexed: 12/13/2022]
97
Delcher AL, Salzberg SL, Phillippy AM. Using MUMmer to identify similar regions in large sequence sets. ACTA ACUST UNITED AC 2008;Chapter 10:Unit 10.3. [PMID: 18428693 DOI: 10.1002/0471250953.bi1003s00] [Citation(s) in RCA: 341] [Impact Index Per Article: 20.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
98
Addressing chromosome evolution in the whole-genome sequence era. Chromosome Res 2008;16:5-16. [PMID: 18293102 DOI: 10.1007/s10577-007-1208-0] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
99
Reeves RH, Garner CC. A year of unprecedented progress in Down syndrome basic research. ACTA ACUST UNITED AC 2008;13:215-20. [PMID: 17910083 DOI: 10.1002/mrdd.20165] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
100
Westra JW, Peterson SE, Yung YC, Mutoh T, Barral S, Chun J. Aneuploid mosaicism in the developing and adult cerebellar cortex. J Comp Neurol 2008;507:1944-51. [PMID: 18273885 DOI: 10.1002/cne.21648] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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