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Ochs J, LaRue T, Tinaz B, Yongue C, Domozych DS. The cortical cytoskeletal network and cell-wall dynamics in the unicellular charophycean green alga Penium margaritaceum. ANNALS OF BOTANY 2014; 114:1237-49. [PMID: 24603606 PMCID: PMC4195542 DOI: 10.1093/aob/mcu013] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2013] [Accepted: 01/15/2013] [Indexed: 05/10/2023]
Abstract
BACKGROUND AND AIMS Penium margaritaceum is a unicellular charophycean green alga with a unique bi-directional polar expansion mechanism that occurs at the central isthmus zone prior to cell division. This entails the focused deposition of cell-wall polymers coordinated by the activities of components of the endomembrane system and cytoskeletal networks. The goal of this study was to elucidate the structural organization of the cortical cytoskeletal network during the cell cycle and identify its specific functional roles during key cell-wall developmental events: pre-division expansion and cell division. METHODS Microtubules and actin filaments were labelled during various cell cycle phases with an anti-tubulin antibody and rhodamine phalloidin, respectively. Chemically induced disruption of the cytoskeleton was used to elucidate specific functional roles of microtubules and actin during cell expansion and division. Correlation of cytoskeletal dynamics with cell-wall development included live cell labelling with wall polymer-specific antibodies and electron microscopy. KEY RESULTS The cortical cytoplasm of Penium is highlighted by a band of microtubules found at the cell isthmus, i.e. the site of pre-division wall expansion. This band, along with an associated, transient band of actin filaments, probably acts to direct the deposition of new wall material and to mark the plane of the future cell division. Two additional bands of microtubules, which we identify as satellite bands, arise from the isthmus microtubular band at the onset of expansion and displace toward the poles during expansion, ultimately marking the isthmus of future daughter cells. Treatment with microtubule and actin perturbation agents reversibly stops cell division. CONCLUSIONS The cortical cytoplasm of Penium contains distinct bands of microtubules and actin filaments that persist through the cell cycle. One of these bands, termed the isthmus microtubule band, or IMB, marks the site of both pre-division wall expansion and the zone where a cross wall will form during cytokinesis. This suggests that prior to the evolution of land plants, a dynamic, cortical cytoskeletal array similar to a pre-prophase band had evolved in the charophytes. However, an interesting variation on the cortical band theme is present in Penium, where two satellite microtubule bands are produced at the onset of cell expansion, each of which is destined to become an IMB in the two daughter cells after cytokinesis. These unique cytoskeletal components demonstrate the close temporal control and highly coordinated cytoskeletal dynamics of cellular development in Penium.
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Affiliation(s)
- Julie Ochs
- Department of Biology and Skidmore Microscopy Imaging Center, Skidmore College, Saratoga Springs, NY 12866, USA
| | - Therese LaRue
- Department of Biology and Skidmore Microscopy Imaging Center, Skidmore College, Saratoga Springs, NY 12866, USA
| | - Berke Tinaz
- Department of Biology and Skidmore Microscopy Imaging Center, Skidmore College, Saratoga Springs, NY 12866, USA
| | - Camille Yongue
- Department of Biology and Skidmore Microscopy Imaging Center, Skidmore College, Saratoga Springs, NY 12866, USA
| | - David S Domozych
- Department of Biology and Skidmore Microscopy Imaging Center, Skidmore College, Saratoga Springs, NY 12866, USA
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Centrosomes and the Art of Mitotic Spindle Maintenance. INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY 2014; 313:179-217. [DOI: 10.1016/b978-0-12-800177-6.00006-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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103
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Struk S, Dhonukshe P. MAPs: cellular navigators for microtubule array orientations in Arabidopsis. PLANT CELL REPORTS 2014; 33:1-21. [PMID: 23903948 DOI: 10.1007/s00299-013-1486-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Revised: 07/14/2013] [Accepted: 07/18/2013] [Indexed: 05/24/2023]
Abstract
Microtubules are subcellular nanotubes composed of α- and β-tubulin that arise from microtubule nucleation sites, mainly composed of γ-tubulin complexes [corrected]. Cell wall encased plant cells have evolved four distinct microtubule arrays that regulate cell division and expansion. Microtubule-associated proteins, the so called MAPs, construct, destruct and reorganize microtubule arrays thus regulating their spatiotemporal transitions during the cell cycle. By physically binding to microtubules and/or modulating their functions, MAPs control microtubule dynamic instability and/or interfilament cross talk. We survey the recent analyses of Arabidopsis MAPs such as MAP65, MOR1, CLASP, katanin, TON1, FASS, TRM, TAN1 and kinesins in terms of their effects on microtubule array organizations and plant development.
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Affiliation(s)
- Sylwia Struk
- Department of Plant Systems Biology, VIB, 9052, Ghent, Belgium
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104
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van der Knaap E, Chakrabarti M, Chu YH, Clevenger JP, Illa-Berenguer E, Huang Z, Keyhaninejad N, Mu Q, Sun L, Wang Y, Wu S. What lies beyond the eye: the molecular mechanisms regulating tomato fruit weight and shape. FRONTIERS IN PLANT SCIENCE 2014; 5:227. [PMID: 24904622 PMCID: PMC4034497 DOI: 10.3389/fpls.2014.00227] [Citation(s) in RCA: 139] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2014] [Accepted: 05/06/2014] [Indexed: 05/19/2023]
Abstract
Domestication of fruit and vegetables resulted in a huge diversity of shapes and sizes of the produce. Selections that took place over thousands of years of alleles that increased fruit weight and altered shape for specific culinary uses provide a wealth of resources to study the molecular bases of this diversity. Tomato (Solanum lycopersicum) evolved from a wild ancestor (S. pimpinellifolium) bearing small and round edible fruit. Molecular genetic studies led to the identification of two genes selected for fruit weight: FW2.2 encoding a member of the Cell Number Regulator family; and FW3.2 encoding a P450 enzyme and the ortholog of KLUH. Four genes were identified that were selected for fruit shape: SUN encoding a member of the IQD family of calmodulin-binding proteins leading to fruit elongation; OVATE encoding a member of the OVATE family proteins involved in transcriptional repression leading to fruit elongation; LC encoding most likely the ortholog of WUSCHEL controlling meristem size and locule number; FAS encoding a member in the YABBY family controlling locule number leading to flat or oxheart shape. For this article, we will provide an overview of the putative function of the known genes, when during floral and fruit development they are hypothesized to act and their potential importance in regulating morphological diversity in other fruit and vegetable crops.
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Affiliation(s)
- Esther van der Knaap
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
- *Correspondence: Esther van der Knaap, Department of Horticulture and Crop Science, The Ohio State University, 1680 Madison Ave., Wooster, OH, 44691, USA e-mail:
| | - Manohar Chakrabarti
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Yi Hsuan Chu
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Josh P. Clevenger
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Eudald Illa-Berenguer
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Zejun Huang
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Neda Keyhaninejad
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Qi Mu
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Liang Sun
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
| | - Yanping Wang
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
- Department of Pomology, College of Agriculture and Biotechnology, China Agricultural UniversityBeijing, China
| | - Shan Wu
- Department of Horticulture and Crop Science, The Ohio State UniversityWooster, OH, USA
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105
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Horio T, Murata T. The role of dynamic instability in microtubule organization. FRONTIERS IN PLANT SCIENCE 2014; 5:511. [PMID: 25339962 PMCID: PMC4188131 DOI: 10.3389/fpls.2014.00511] [Citation(s) in RCA: 81] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2014] [Accepted: 09/12/2014] [Indexed: 05/09/2023]
Abstract
Microtubules are one of the three major cytoskeletal components in eukaryotic cells. Heterodimers composed of GTP-bound α- and β-tubulin molecules polymerize to form microtubule protofilaments, which associate laterally to form a hollow microtubule. Tubulin has GTPase activity and the GTP molecules associated with β-tubulin molecules are hydrolyzed shortly after being incorporated into the polymerizing microtubules. GTP hydrolysis alters the conformation of the tubulin molecules and drives the dynamic behavior of microtubules. Periods of rapid microtubule polymerization alternate with periods of shrinkage in a process known as dynamic instability. In plants, dynamic instability plays a key role in determining the organization of microtubules into arrays, and these arrays vary throughout the cell cycle. In this review, we describe the mechanisms that regulate microtubule dynamics and underlie dynamic instability, and discuss how dynamic instability may shape microtubule organization in plant cells.
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Affiliation(s)
- Tetsuya Horio
- Department of Natural Sciences, Nippon Sport Science UniversityYokohama, Japan
| | - Takashi Murata
- Division of Evolutionary Biology, National Institute for Basic BiologyOkazaki, Japan
- Department of Basic Biology, School of Life Sciences, The Graduate University for Advanced StudiesOkazaki, Japan
- *Correspondence: Takashi Murata, Division of Evolutionary Biology, National Institute for Basic Biology, Myodaiji, Okazaki, Aichi 444-8585, Japan e-mail:
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Andre J, Kerry L, Qi X, Hawkins E, Drizyte K, Ginger ML, McKean PG. An alternative model for the role of RP2 protein in flagellum assembly in the African trypanosome. J Biol Chem 2013; 289:464-75. [PMID: 24257747 PMCID: PMC3879569 DOI: 10.1074/jbc.m113.509521] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
The tubulin cofactor C domain-containing protein TbRP2 is a basal body (centriolar) protein essential for axoneme formation in the flagellate protist Trypanosoma brucei, the causal agent of African sleeping sickness. Here, we show how TbRP2 is targeted and tethered at mature basal bodies and provide novel insight into TbRP2 function. Regarding targeting, understanding how several hundred proteins combine to build a microtubule axoneme is a fundamental challenge in eukaryotic cell biology. We show that basal body localization of TbRP2 is mediated by twinned, N-terminal TOF (TON1, OFD1, and FOP) and LisH motifs, motifs that otherwise facilitate localization of only a few conserved proteins at microtubule-organizing centers in animals, plants, and flagellate protists. Regarding TbRP2 function, there is a debate as to whether the flagellar assembly function of specialized, centriolar tubulin cofactor C domain-containing proteins is processing tubulin, the major component of axonemes, or general vesicular trafficking in a flagellum assembly context. Here we report that TbRP2 is required for the recruitment of T. brucei orthologs of MKS1 and MKS6, proteins that, in animal cells, are part of a complex that assembles at the base of the flagellum to regulate protein composition and cilium function. We also identify that TbRP2 is detected by YL1/2, an antibody classically used to detect α-tubulin. Together, these data suggest a general processing role for TbRP2 in trypanosome flagellum assembly and challenge the notion that TbRP2 functions solely in assessing tubulin “quality” prior to tubulin incorporation into the elongating axoneme.
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Affiliation(s)
- Jane Andre
- From the Faculty of Health and Medicine, Biomedical and Life Sciences, Lancaster University, Lancaster LA1 4YQ, United Kingdom
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107
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Bender KW, Snedden WA. Calmodulin-related proteins step out from the shadow of their namesake. PLANT PHYSIOLOGY 2013; 163:486-95. [PMID: 23908390 PMCID: PMC3793030 DOI: 10.1104/pp.113.221069] [Citation(s) in RCA: 73] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2013] [Accepted: 07/31/2013] [Indexed: 05/18/2023]
Abstract
Emerging roles for these proteins in plant development and stress response highlight their importance in plant signaling, and their functional diversity underscores the significance of Ca2+ as a second messenger in plants .
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Affiliation(s)
- Kyle W. Bender
- Department of Plant Biology, University of Illinois, Urbana, Illinois 61801 (K.W.B.); and Department of Biology, Queen’s University, Kingston, Ontario, Canada K7L 3N6 (W.A.S.)
| | - Wayne A. Snedden
- Department of Plant Biology, University of Illinois, Urbana, Illinois 61801 (K.W.B.); and Department of Biology, Queen’s University, Kingston, Ontario, Canada K7L 3N6 (W.A.S.)
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108
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Masoud K, Herzog E, Chabouté ME, Schmit AC. Microtubule nucleation and establishment of the mitotic spindle in vascular plant cells. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013; 75:245-257. [PMID: 23521421 DOI: 10.1111/tpj.12179] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2012] [Revised: 02/25/2013] [Accepted: 03/12/2013] [Indexed: 06/01/2023]
Abstract
The microtubular cytoskeleton plays a major role in cellular organization and proliferation. The first step in construction of a microtubule is microtubule nucleation. Individual microtubules then participate in organization of more complex microtubule arrays. A strong body of evidence suggests that the underlying molecular mechanisms involve protein complexes that are conserved among eukaryotes. However, plant cell specificities, mainly characterized by the presence of a cell wall and the absence of centrosomes, must be taken into account to understand their mitotic processes. The goal of this review is to summarize and discuss current knowledge regarding the mechanisms involved in plant spindle assembly during early mitotic events. The functions of the proteins currently characterized at microtubule nucleation sites and involved in spindle assembly are considered during cell-cycle progression from G2 phase to metaphase.
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Affiliation(s)
- Kinda Masoud
- Institut de Biologie Moléculaire des Plantes, Laboratoire Propre du Centre National de la Recherche Scientifique (UPR 2357) Conventionné avec l'Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France
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109
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Gardiner J. The evolution and diversification of plant microtubule-associated proteins. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013; 75:219-29. [PMID: 23551562 DOI: 10.1111/tpj.12189] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2012] [Revised: 03/11/2013] [Accepted: 03/22/2013] [Indexed: 05/07/2023]
Abstract
Plant evolution is marked by major advances in structural characteristics that facilitated the highly successful colonization of dry land. Underlying these advances is the evolution of genes encoding specialized proteins that form novel microtubular arrays of the cytoskeleton. This review investigates the evolution of plant families of microtubule-associated proteins (MAPs) through the recently sequenced genomes of Arabidopsis thaliana, Oryza sativa, Selaginella moellendorffii, Physcomitrella patens, Volvox carteri and Chlamydomonas reinhardtii. The families of MAPs examined are AIR9, CLASP, CRIPT, MAP18, MOR1, TON, EB1, AtMAP70, SPR2, SPR1, WVD2 and MAP65 families (abbreviations are defined in the footnote to Table 1). Conjectures are made regarding the evolution of MAPs in plants in relation to the evolution of multicellularity, oriented cell division and vasculature. Angiosperms in particular have high numbers of proteins that are involved in promotion of helical growth or its suppression, and novel plant microtubular structures may have acted as a catalyst for the development of novel plant MAPs. Comparisons of plant MAP gene families with those of animals show that animals may have more flexibility in the structure of their microtubule cytoskeletons than plants, but with both plants and animals possessing many MAP splice variants.
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Affiliation(s)
- John Gardiner
- School of Biological Sciences, The University of Sydney, Sydney, NSW 2006, Australia.
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110
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Rasmussen CG, Wright AJ, Müller S. The role of the cytoskeleton and associated proteins in determination of the plant cell division plane. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013; 75:258-69. [PMID: 23496276 DOI: 10.1111/tpj.12177] [Citation(s) in RCA: 89] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2012] [Revised: 02/26/2013] [Accepted: 03/12/2013] [Indexed: 05/08/2023]
Abstract
In plants, as in all eukaryotic organisms, microtubule- and actin-filament based structures play fundamental roles during cell division. In addition to the mitotic spindle, plant cells have evolved a unique cytoskeletal structure that designates a specific division plane before the onset of mitosis via formation of a cortical band of microtubules and actin filaments called the preprophase band. During cytokinesis, a second plant-specific microtubule and actin filament structure called the phragmoplast directs vesicles to create the new cell wall. In response to intrinsic and extrinsic cues, many plant cells form a preprophase band in G2 , then the preprophase band recruits specific proteins to populate the cortical division site prior to disassembly of the preprophase band in prometaphase. These proteins are thought to act as a spatial reminder that actively guides the phragmoplast towards the cortical division site during cytokinesis. A number of proteins involved in determination and maintenance of the plane of cell division have been identified. Our current understanding of the molecular interactions of these proteins and their regulation of microtubules is incomplete, but advanced imaging techniques and computer simulations have validated some early concepts of division site determination.
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Affiliation(s)
- Carolyn G Rasmussen
- Department of Molecular Biology, University of Wyoming, 1000 E. University Avenue, Laramie, WY, USA.
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111
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Fishel EA, Dixit R. Role of nucleation in cortical microtubule array organization: variations on a theme. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013; 75:270-7. [PMID: 23464654 DOI: 10.1111/tpj.12166] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2012] [Revised: 02/17/2013] [Accepted: 03/01/2013] [Indexed: 05/10/2023]
Abstract
The interphase cortical microtubules (CMTs) of plant cells form strikingly ordered arrays in the absence of a dedicated microtubule-organizing center. Considerable research effort has focused on activities such as bundling and severing that occur after CMT nucleation and are thought to be important for generating and maintaining ordered arrays. In this review, we focus on how nucleation affects CMT array organization. The bulk of CMTs are initiated from γ-tubulin-containing nucleation complexes localized to the lateral walls of pre-existing CMTs. These CMTs grow either at an acute angle or parallel to the pre-existing CMT. Although the impact of microtubule-dependent nucleation is not fully understood, recent genetic, live-cell imaging and computer simulation studies have demonstrated that the location, timing and geometry of CMT nucleation have a considerable impact on the organization and orientation of the CMT array. These nucleation properties are defined by the composition, position and dynamics of γ-tubulin-containing nucleation complexes, which represent control points for the cell to regulate CMT array organization.
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Affiliation(s)
- Erica A Fishel
- Biology Department, Washington University in St Louis, One Brookings Drive, CB 1137, St Louis, MO 63130, USA
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112
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Gallois JL, Drouaud J, Lécureuil A, Guyon-Debast A, Bonhomme S, Guerche P. Functional characterization of the plant ubiquitin regulatory X (UBX) domain-containing protein AtPUX7 in Arabidopsis thaliana. Gene 2013; 526:299-308. [PMID: 23747397 DOI: 10.1016/j.gene.2013.05.056] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2012] [Revised: 05/16/2013] [Accepted: 05/21/2013] [Indexed: 10/26/2022]
Abstract
p97/CDC48 is a major AAA-ATPase that acts in many cellular events such as ubiquitin-dependent degradation and membrane fusion. Its specificity depends on a set of adaptor proteins, most of them containing the ubiquitin regulatory X (UBX) domain. Using a differential hybridization system, we isolated a UBX-containing protein that is expressed during the early phase of male gametophyte development in the crop Brassica napus and isolated and characterized its closest Arabidopsis thaliana homolog, AtPUX7. The AtPUX7 gene is expressed broadly in both the sporophyte and gametophyte due to regulation inferred by its first intron. The subcellular localization of AtPUX7 was assigned mainly to the nucleus in both the sporophyte and in pollen, mirroring the AAA-ATPase AtCDC48A localization. Furthermore, AtPUX7 interacts specifically with AtCDC48A in yeast as well as in planta in the nucleus. This interaction was mediated through the AtPUX7 UBX domain, which is located at the protein C-terminus, while an N-terminal UBA domain mediated its interaction with ubiquitin. Consistent with those results, a yeast-three hybrid analysis showed that AtPUX7 can act as a bridge between AtCDC48A and ubiquitin, suggesting a role in targeted protein degradation. It is likely that AtPUX7 acts redundantly with other members of the Arabidopsis PUX family because a null Atpux7-1 mutant does not display obvious developmental defects.
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Affiliation(s)
- Jean-Luc Gallois
- INRA-UR 1052 Génétique et Amélioration des Fruits et Légumes (GAFL), Domaine St Maurice, CS 60094, F-84143 Montfavet Cedex, France.
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113
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Spinner L, Gadeyne A, Belcram K, Goussot M, Moison M, Duroc Y, Eeckhout D, De Winne N, Schaefer E, Van De Slijke E, Persiau G, Witters E, Gevaert K, De Jaeger G, Bouchez D, Van Damme D, Pastuglia M. A protein phosphatase 2A complex spatially controls plant cell division. Nat Commun 2013; 4:1863. [DOI: 10.1038/ncomms2831] [Citation(s) in RCA: 100] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2012] [Accepted: 04/04/2013] [Indexed: 11/09/2022] Open
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114
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McMichael CM, Bednarek SY. Cytoskeletal and membrane dynamics during higher plant cytokinesis. THE NEW PHYTOLOGIST 2013; 197:1039-1057. [PMID: 23343343 DOI: 10.1111/nph.12122] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2012] [Accepted: 12/02/2012] [Indexed: 05/08/2023]
Abstract
Following mitosis, cytoplasm, organelles and genetic material are partitioned into daughter cells through the process of cytokinesis. In somatic cells of higher plants, two cytoskeletal arrays, the preprophase band and the phragmoplast, facilitate the positioning and de novo assembly of the plant-specific cytokinetic organelle, the cell plate, which develops across the division plane and fuses with the parental plasma membrane to yield distinct new cells. The coordination of cytoskeletal and membrane dynamics required to initiate, assemble and shape the cell plate as it grows toward the mother cell cortex is dependent upon a large array of proteins, including molecular motors, membrane tethering, fusion and restructuring factors and biosynthetic, structural and regulatory elements. This review focuses on the temporal and molecular requirements of cytokinesis in somatic cells of higher plants gleaned from recent studies using cell biology, genetics, pharmacology and biochemistry.
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Affiliation(s)
- Colleen M McMichael
- Department of Biochemistry, University of Wisconsin-Madison, 433 Babcock Dr, Madison, WI, 53713, USA
| | - Sebastian Y Bednarek
- Department of Biochemistry, University of Wisconsin-Madison, 433 Babcock Dr, Madison, WI, 53713, USA
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115
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Žd'árská M, Zatloukalová P, Benítez M, Šedo O, Potěšil D, Novák O, Svačinová J, Pešek B, Malbeck J, Vašíčková J, Zdráhal Z, Hejátko J. Proteome analysis in Arabidopsis reveals shoot- and root-specific targets of cytokinin action and differential regulation of hormonal homeostasis. PLANT PHYSIOLOGY 2013; 161:918-30. [PMID: 23209126 PMCID: PMC3561029 DOI: 10.1104/pp.112.202853] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The plant hormones cytokinins (CKs) regulate multiple developmental and physiological processes in Arabidopsis (Arabidopsis thaliana). Responses to CKs vary in different organs and tissues (e.g. the response to CKs has been shown to be opposite in shoot and root samples). However, the tissue-specific targets of CKs and the mechanisms underlying such specificity remain largely unclear. Here, we show that the Arabidopsis proteome responds with strong tissue and time specificity to the aromatic CK 6-benzylaminopurine (BAP) and that fast posttranscriptional and/or posttranslational regulation of protein abundance is involved in the contrasting shoot and root proteome responses to BAP. We demonstrate that BAP predominantly regulates proteins involved in carbohydrate and energy metabolism in the shoot as well as protein synthesis and destination in the root. Furthermore, we found that BAP treatment affects endogenous hormonal homeostasis, again with strong tissue specificity. In the shoot, BAP up-regulates the abundance of proteins involved in abscisic acid (ABA) biosynthesis and the ABA response, whereas in the root, BAP rapidly and strongly up-regulates the majority of proteins in the ethylene biosynthetic pathway. This was further corroborated by direct measurements of hormone metabolites, showing that BAP increases ABA levels in the shoot and 1-aminocyclopropane-1-carboxylic acid, the rate-limiting precursor of ethylene biosynthesis, in the root. In support of the physiological importance of these findings, we identified the role of proteins mediating BAP-induced ethylene production, METHIONINE SYNTHASE1 and ACC OXIDASE2, in the early root growth response to BAP.
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116
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Bonhomme S, Nogué F, Rameau C, Schaefer DG. Usefulness of Physcomitrella patens for studying plant organogenesis. Methods Mol Biol 2013; 959:21-43. [PMID: 23299666 DOI: 10.1007/978-1-62703-221-6_2] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
In this chapter, we review the main organogenesis features and associated regulation processes of the moss Physcomitrella patens (P. patens), the model plant for the Bryophytes. We highlight how the study of this descendant of the earliest plant species that colonized earth, brings useful keys to understand the mechanisms that determine and control both vascular and non vascular plants organogenesis. Despite its simple morphogenesis pattern, P. patens still requires the fine tuning of organogenesis regulators, including hormone signalling, common to the whole plant kingdom, and which study is facilitated by a high number of molecular tools, among which the powerful possibility of gene targeting/replacement. The recent discovery of moss cells reprogramming capacity completes the picture of an excellent model for studying plant organogenesis.
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Affiliation(s)
- Sandrine Bonhomme
- Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech, INRA Centre de Versailles-Grignon, Versailles, France.
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117
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Smolarkiewicz M, Dhonukshe P. Formative Cell Divisions: Principal Determinants of Plant Morphogenesis. ACTA ACUST UNITED AC 2012; 54:333-42. [DOI: 10.1093/pcp/pcs175] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Gicquel M, Taconnat L, Renou JP, Esnault MA, Cabello-Hurtado F. Kinetic transcriptomic approach revealed metabolic pathways and genotoxic-related changes implied in the Arabidopsis response to ionising radiations. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2012; 195:106-19. [PMID: 22921004 DOI: 10.1016/j.plantsci.2012.06.015] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2012] [Revised: 06/21/2012] [Accepted: 06/25/2012] [Indexed: 05/22/2023]
Abstract
Plants exposed to ionising radiation (IR) have to face direct and indirect (oxidative stress) deleterious effects whose intensity depends on the dose applied and led to differential genome regulation. Transcriptomic analyses were conducted with CATMA microarray technology on Arabidopsis thaliana plantlets, 2 and 26h after exposure to the IR doses 10Gy and 40Gy. 10Gy treatment seemed to enhance antioxidative compound biosynthetic pathways whereas the 40Gy dose up-regulated ROS-scavenging enzyme genes. Transcriptomic data also highlighted a differential regulation of chloroplast constituent genes depending on the IR dose, 10Gy stimulating and 40Gy down-regulating. This probable 40Gy decrease of photosynthesis could help for the limitation of ROS production and may be coupled with programmed cell death (PCD)/senescence phenomena. Comparisons with previous transcriptomic studies on plants exposed to a 100Gy dose revealed 60 dose-dependent up-regulated genes, including notably cell cycle checkpoints to allow DNA repairing phenomena. Furthermore, the alteration of some cellular structure related gene expression corroborated a probable mitotic arrest after 40Gy. Finally, numerous heat-shock protein and chaperonin genes, known to protect proteins against stress-dependent dysfunction, were up-regulated after IR exposure.
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Affiliation(s)
- Morgane Gicquel
- Mechanisms and Origin of Biodiversity Team, UMR 6553-Ecobio, University of Rennes1, 263 Av. du Général Leclerc, Campus de Beaulieu-Bât.14A, 35042 Rennes, France
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119
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Dantas TJ, Daly OM, Morrison CG. Such small hands: the roles of centrins/caltractins in the centriole and in genome maintenance. Cell Mol Life Sci 2012; 69:2979-97. [PMID: 22460578 PMCID: PMC11114748 DOI: 10.1007/s00018-012-0961-1] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2011] [Revised: 02/20/2012] [Accepted: 03/12/2012] [Indexed: 01/11/2023]
Abstract
Centrins are small, highly conserved members of the EF-hand superfamily of calcium-binding proteins that are found throughout eukaryotes. They play a major role in ensuring the duplication and appropriate functioning of the ciliary basal bodies in ciliated cells. They have also been localised to the centrosome, which is the major microtubule organising centre in animal somatic cells. We describe the identification, cloning and characterisation of centrins in multiple eukaryotic species. Although centrins have been implicated in centriole biogenesis, recent results have indicated that centrosome duplication can, in fact, occur in the absence of centrins. We discuss these data and the non-centrosomal functions that are emerging for the centrins. In particular, we discuss the involvement of centrins in nucleotide excision repair, a process that repairs the DNA lesions that are induced primarily by ultraviolet irradiation. We discuss how centrin may be involved in these diverse processes and contribute to nuclear and cytoplasmic events.
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Affiliation(s)
- Tiago J. Dantas
- Centre for Chromosome Biology, School of Natural Sciences, National University of Ireland Galway, University Road, Galway, Ireland
| | - Owen M. Daly
- Centre for Chromosome Biology, School of Natural Sciences, National University of Ireland Galway, University Road, Galway, Ireland
| | - Ciaran G. Morrison
- Centre for Chromosome Biology, School of Natural Sciences, National University of Ireland Galway, University Road, Galway, Ireland
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120
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Çevik V, Kidd BN, Zhang P, Hill C, Kiddle S, Denby KJ, Holub EB, Cahill DM, Manners JM, Schenk PM, Beynon J, Kazan K. MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis. PLANT PHYSIOLOGY 2012; 160:541-55. [PMID: 22822211 PMCID: PMC3440227 DOI: 10.1104/pp.112.202697] [Citation(s) in RCA: 182] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2012] [Accepted: 07/20/2012] [Indexed: 05/18/2023]
Abstract
The PHYTOCHROME AND FLOWERING TIME1 gene encoding the MEDIATOR25 (MED25) subunit of the eukaryotic Mediator complex is a positive regulator of jasmonate (JA)-responsive gene expression in Arabidopsis (Arabidopsis thaliana). Based on the function of the Mediator complex as a bridge between DNA-bound transcriptional activators and the RNA polymerase II complex, MED25 has been hypothesized to function in association with transcriptional regulators of the JA pathway. However, it is currently not known mechanistically how MED25 functions to regulate JA-responsive gene expression. In this study, we show that MED25 physically interacts with several key transcriptional regulators of the JA signaling pathway, including the APETALA2 (AP2)/ETHYLENE RESPONSE FACTOR (ERF) transcription factors OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF59 and ERF1 as well as the master regulator MYC2. Physical interaction detected between MED25 and four group IX AP2/ERF transcription factors was shown to require the activator interaction domain of MED25 as well as the recently discovered Conserved Motif IX-1/EDLL transcription activation motif of MED25-interacting AP2/ERFs. Using transcriptional activation experiments, we also show that OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF59- and ERF1-dependent activation of PLANT DEFENSIN1.2 as well as MYC2-dependent activation of VEGETATIVE STORAGE PROTEIN1 requires a functional MED25. In addition, MED25 is required for MYC2-dependent repression of pathogen defense genes. These results suggest an important role for MED25 as an integrative hub within the Mediator complex during the regulation of JA-associated gene expression.
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Affiliation(s)
- Volkan Çevik
- School of Life Sciences, University of Warwick, Wellesbourne, Warwick CV35 9EF, United Kingdom.
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121
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Boussardon C, Salone V, Avon A, Berthomé R, Hammani K, Okuda K, Shikanai T, Small I, Lurin C. Two interacting proteins are necessary for the editing of the NdhD-1 site in Arabidopsis plastids. THE PLANT CELL 2012; 24:3684-94. [PMID: 23001034 PMCID: PMC3480295 DOI: 10.1105/tpc.112.099507] [Citation(s) in RCA: 111] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
After transcription, mRNA editing in angiosperm chloroplasts and mitochondria results in the conversion of cytidine to uridine by deamination. Analysis of Arabidopsis thaliana mutants affected in RNA editing have shown that many pentatricopeptide repeat proteins (PPRs) are required for specific cytidine deamination events. PPR proteins have been shown to be sequence-specific RNA binding proteins allowing the recognition of the C to be edited. The C-terminal DYW domain present in many editing factors has been proposed to catalyze C deamination, as it shows sequence similarities with cytidine deaminases in other organisms. However, many editing factors, such as the first to be discovered, CHLORORESPIRATORY REDUCTION4 (CRR4), lack this domain, so its importance has been unclear. Using a reverse genetic approach, we identified DYW1, an RNA editing factor acting specifically on the plastid ndhD-1 editing site recognized by CRR4. Unlike other known editing factors, DYW1 contains no identifiable PPR motifs but does contain a clear DYW domain. We were able to show interaction between CRR4 and DYW1 by bimolecular fluorescence complementation and to reconstitute a functional chimeric CRR4-DYW1 protein complementing the crr4 dyw1double mutant. We propose that CRR4 and DYW1 act together to edit the ndhD-1 site.
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Affiliation(s)
- Clément Boussardon
- Unité de Recherche en Génomique Végétale, Unité Mixte de Recherche, Institut National de la Recherche Agronomique/Université Evry Val d'Essonne/Equipe de Recherche Labellisée, Centre National de la Recherche Scientifique 91057, 91057 Evry cedex, France
- Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia
| | - Véronique Salone
- Unité de Recherche en Génomique Végétale, Unité Mixte de Recherche, Institut National de la Recherche Agronomique/Université Evry Val d'Essonne/Equipe de Recherche Labellisée, Centre National de la Recherche Scientifique 91057, 91057 Evry cedex, France
- Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia
| | - Alexandra Avon
- Unité de Recherche en Génomique Végétale, Unité Mixte de Recherche, Institut National de la Recherche Agronomique/Université Evry Val d'Essonne/Equipe de Recherche Labellisée, Centre National de la Recherche Scientifique 91057, 91057 Evry cedex, France
| | - Richard Berthomé
- Unité de Recherche en Génomique Végétale, Unité Mixte de Recherche, Institut National de la Recherche Agronomique/Université Evry Val d'Essonne/Equipe de Recherche Labellisée, Centre National de la Recherche Scientifique 91057, 91057 Evry cedex, France
| | - Kamel Hammani
- Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia
| | - Kenji Okuda
- Department of Botany, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Toshiharu Shikanai
- Department of Botany, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Ian Small
- Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia
| | - Claire Lurin
- Unité de Recherche en Génomique Végétale, Unité Mixte de Recherche, Institut National de la Recherche Agronomique/Université Evry Val d'Essonne/Equipe de Recherche Labellisée, Centre National de la Recherche Scientifique 91057, 91057 Evry cedex, France
- Address correspondence to
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122
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Lipka E, Müller S. Potential roles for Kinesins at the cortical division site. FRONTIERS IN PLANT SCIENCE 2012; 3:158. [PMID: 22811684 PMCID: PMC3395808 DOI: 10.3389/fpls.2012.00158] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2012] [Accepted: 06/28/2012] [Indexed: 05/21/2023]
Abstract
Spatial control of cytokinesis is critical for cell and plant morphology. The plane of cell division is established at G2/M transition and is initially demarcated at the cortex of the cell by the cytoskeletal preprophase band (PPB) and subsequently throughout mitosis by the cortical division zone (CDZ). Few kinesins, belonging to different classes of the superfamily, either display a distinct spatio-temporal localization at the PPB and CDZ, or genetic evidence proposes a specific function there. Protein phosphorylation and degradation are likely directing the cell cycle-dependent localization and activity of some of these kinesins, as indicated by mutation of respective conserved motifs. Furthermore, kinesins are required for continuous recruitment of CDZ identity markers to the CDZ. This review summarizes the limited current knowledge of kinesins potentially involved in the steps required for correctly oriented division planes, considering localization patterns and genetic evidence, and discussing kinesin function in context with interaction partners and cell cycle regulation.
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Affiliation(s)
| | - Sabine Müller
- Cell and Developmental Genetics, Center for Plant Molecular Biology, University of Tuebingen, Tuebingen, Germany
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123
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Zhang Y, He CY. Centrins in unicellular organisms: functional diversity and specialization. PROTOPLASMA 2012; 249:459-467. [PMID: 21786168 DOI: 10.1007/s00709-011-0305-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2011] [Accepted: 07/10/2011] [Indexed: 05/31/2023]
Abstract
Centrins (also known as caltractins) are conserved, EF hand-containing proteins ubiquitously found in eukaryotes. Similar to calmodulins, the calcium-binding EF hands in centrins fold into two structurally similar domains separated by an alpha-helical linker region, shaping like a dumbbell. The small size (15-22 kDa) and domain organization of centrins and their functional diversity/specialization make them an ideal system to study protein structure-function relationship. Here, we review the work on centrins with a focus on their structures and functions characterized in unicellular organisms.
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Affiliation(s)
- Yu Zhang
- Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore, 117543, Singapore
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124
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Müller S. Universal rules for division plane selection in plants. PROTOPLASMA 2012; 249:239-53. [PMID: 21611883 DOI: 10.1007/s00709-011-0289-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2011] [Accepted: 05/16/2011] [Indexed: 05/08/2023]
Abstract
Coordinated cell divisions and cell expansion are the key processes that command growth in all organisms. The orientation of cell divisions and the direction of cell expansion are critical for normal development. Symmetric divisions contribute to proliferation and growth, while asymmetric divisions initiate pattern formation and differentiation. In plants these processes are of particular importance since their cells are encased in cellulosic walls that determine their shape and lock their position within tissues and organs. Several recent studies have analyzed the relationship between cell shape and patterns of symmetric cell division in diverse organisms and employed biophysical and mathematical considerations to develop computer simulations that have allowed accurate prediction of cell division patterns. From these studies, a picture emerges that diverse biological systems follow simple universal rules of geometry to select their division planes and that the microtubule cytoskeleton takes a major part in sensing the geometric information and translates this information into a specific division outcome. In plant cells, the division plane is selected before mitosis, and spatial information of the division plane is preserved throughout division by the presence of reference molecules at a distinct region of the plasma membrane, the cortical division zone. The recruitment of these division zone markers occurs multiple times by several mechanisms, suggesting that the cortical division zone is a highly dynamic region.
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Affiliation(s)
- Sabine Müller
- Center for Plant Molecular Biology-Developmental Genetics, University of Tübingen, Auf der Morgenstelle 3, 72076, Tübingen, Germany.
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125
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Kirik A, Ehrhardt DW, Kirik V. TONNEAU2/FASS regulates the geometry of microtubule nucleation and cortical array organization in interphase Arabidopsis cells. THE PLANT CELL 2012; 24:1158-70. [PMID: 22395485 PMCID: PMC3336111 DOI: 10.1105/tpc.111.094367] [Citation(s) in RCA: 99] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2011] [Revised: 02/06/2012] [Accepted: 02/20/2012] [Indexed: 05/19/2023]
Abstract
Organization of microtubules into ordered arrays involves spatial and temporal regulation of microtubule nucleation. Here, we show that acentrosomal microtubule nucleation in plant cells involves a previously unknown regulatory step that determines the geometry of microtubule nucleation. Dynamic imaging of interphase cortical microtubules revealed that the ratio of branching to in-bundle microtubule nucleation on cortical microtubules is regulated by the Arabidopsis thaliana B'' subunit of protein phosphatase 2A, which is encoded by the TONNEAU2/FASS (TON2) gene. The probability of nucleation from γ-tubulin complexes localized at the cell cortex was not affected by a loss of TON2 function, suggesting a specific role of TON2 in regulating the nucleation geometry. Both loss of TON2 function and ectopic targeting of TON2 to the plasma membrane resulted in defects in cell shape, suggesting the importance of TON2-mediated regulation of the microtubule cytoskeleton in cell morphogenesis. Loss of TON2 function also resulted in an inability for cortical arrays to reorient in response to light stimulus, suggesting an essential role for TON2 and microtubule branching nucleation in reorganization of microtubule arrays. Our data establish TON2 as a regulator of interphase microtubule nucleation and provide experimental evidence for a novel regulatory step in the process of microtubule-dependent nucleation.
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Affiliation(s)
- Angela Kirik
- School of Biological Sciences, Illinois State University, Normal, Illinois 61790
| | - David W. Ehrhardt
- Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305
| | - Viktor Kirik
- School of Biological Sciences, Illinois State University, Normal, Illinois 61790
- Address correspondence to
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126
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Chigri F, Flosdorff S, Pilz S, Kölle E, Dolze E, Gietl C, Vothknecht UC. The Arabidopsis calmodulin-like proteins AtCML30 and AtCML3 are targeted to mitochondria and peroxisomes, respectively. PLANT MOLECULAR BIOLOGY 2012; 78:211-22. [PMID: 22116655 DOI: 10.1007/s11103-011-9856-z] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2011] [Accepted: 11/08/2011] [Indexed: 05/24/2023]
Abstract
Calmodulin (CaM) is a ubiquitous sensor/transducer of calcium signals in eukaryotic organisms. While CaM mediated calcium regulation of cytosolic processes is well established, there is growing evidence for the inclusion of organelles such as chloroplasts, mitochondria and peroxisomes into the calcium/calmodulin regulation network. A number of CaM-binding proteins have been identified in these organelles and processes such as protein import into chloroplasts and mitochondria have been shown to be governed by CaM regulation. What have been missing to date are the mediators of this regulation since no CaM or calmodulin-like protein (CML) has been identified in any of these organelles. Here we show that two Arabidopsis CMLs, AtCML3 and AtCML30, are localized in peroxisomes and mitochondria, respectively. AtCML3 is targeted via an unusual C-terminal PTS1-like tripeptide while AtCML30 utilizes an N-terminal, non-cleavable transit peptide. Both proteins possess the typical structure of CaMs, with two pairs of EF-hand motifs separated by a short linker domain. They furthermore display common characteristics, such as calcium-dependent alteration of gel mobility and calcium-dependent exposure of a hydrophobic surface. This indicates that they can function in a similar manner as canonical CaMs. The presence of close homologues to AtCML3 and AtCML30 in other plants further indicates that organellar targeting of these CMLs is not a specific feature of Arabidopsis. The identification of peroxisomal and mitochondrial CMLs is an important step in the understanding how these organelles are integrated into the cellular calcium/calmodulin signaling pathways.
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Affiliation(s)
- Fatima Chigri
- Department of Biology of the LMU Munich, Center for Integrated Protein Science (Munich), 82152 Martinsried, Germany
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127
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Lucas JR, Sack FD. Polar development of preprophase bands and cell plates in the Arabidopsis leaf epidermis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012; 69:501-509. [PMID: 21972819 DOI: 10.1111/j.1365-313x.2011.04809.x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Preprophase bands are belts of cortical microtubules that appear at the end of interphase and predict where cell plates will fuse with parental walls during division. Phragmoplasts are microtubule-rich arrays that orchestrate the growth and guidance of cell plates during cytokinesis. Descriptions of the development of these arrays often assume non-polar formation, with preprophase bands developing more or less simultaneously around the cell circumference. Phragmoplasts are often described as initiating at the cell center and then expanding evenly outwards until fusion with parent cell walls. We analyzed the spatio-temporal development of both arrays because initial observations of array growth in the Arabidopsis leaf epidermis revealed directional variability. Almost all preprophase bands formed in a polar fashion, with initiation and maturation occurring first in the cell cortex near the inside of the leaf, and later in the outer cell cortex. A similar polarity developed in phragmoplasts and cell plates, raising the possibility that polarized division is common in plants. Together, these findings identify additional polar features of the epidermis, and thereby provide a visually accessible system for identifying new proteins and subcellular components involved in the development of cell division and the previously formed division site.
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Affiliation(s)
- Jessica Regan Lucas
- Department of Plant Cellular and Molecular Biology, Ohio State University, Columbus, OH 43210, USA
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128
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Tavert-Roudet G, Abdul-Razzak A, Doublet B, Walter J, Delaunay T, German-Retana S, Michon T, Le Gall O, Candresse T. The C terminus of lettuce mosaic potyvirus cylindrical inclusion helicase interacts with the viral VPg and with lettuce translation eukaryotic initiation factor 4E. J Gen Virol 2012; 93:184-193. [PMID: 21918009 DOI: 10.1099/vir.0.035881-0] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Recessive resistance to lettuce mosaic virus (LMV) is conferred in lettuce by the mo1 gene, encoding the eukaryotic translation initiation factor 4E (eIF4E). The C terminus of the viral cylindrical inclusion helicase (CI-Cter), together with the VPg, is involved directly in overcoming mo1 resistance. In this study, recombinant LMV VPg and CI-Cter proteins from wild-type or resistance-breaking isolates were expressed and purified from Escherichia coli. The allelic forms of eIF4E from susceptible or resistant lettuce cultivars were produced similarly and these proteins were used in ELISA-based assays to demonstrate the in vitro binding of the various forms of LMV CI-Cter to both lettuce eIF4E and LMV VPg proteins. All combinations tested displayed significant and specific interactions, and the interaction between the C-terminal part of the LMV CI and eIF4E was confirmed in vivo in bimolecular fluorescence complementation assays. Higher interaction signals for both CI-eIF4E and CI-VPg were observed for LMV-E, indicating that the eIF4E interaction network involving CI and VPg appears to be stronger in the case of this resistance-breaking isolate. This could suggest the need for a minimal interaction threshold for infection success in resistant lettuce, but more precise measurement of the interaction parameters linking eIF4E, VPg and CI is needed in order to reinforce such a hypothesis.
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Affiliation(s)
- G Tavert-Roudet
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - A Abdul-Razzak
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - B Doublet
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - J Walter
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - T Delaunay
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - S German-Retana
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - T Michon
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - O Le Gall
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
| | - T Candresse
- Equipe de Virologie, INRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, BP81, 33883 Villenave d'Ornon cedex, France
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Aubusson-Fleury A, Lemullois M, de Loubresse NG, Laligné C, Cohen J, Rosnet O, Jerka-Dziadosz M, Beisson J, Koll F. FOR20, a conserved centrosomal protein, is required for assembly of the transition zone and basal body docking at the cell surface. J Cell Sci 2012; 125:4395-404. [DOI: 10.1242/jcs.108639] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Abstract
Within the FOP family of centrosomal proteins, the conserved FOR20 protein has been implicated in the control of primary cilium assembly in human cells. To ascertain its role in ciliogenesis, we have investigated the function of its ortholog, PtFOR20p, in a multiciliated unicellular organism, Paramecium. By a combined functional and cytological analysis, we found that PtFOR20p specifically localizes at basal bodies and is required to build the transition zone, a prerequisite to their maturation and docking at the cell surface, hence to ciliogenesis. We also found that PtCen2p (one of the two basal body specific centrins, ortholog of HsCen2) is required to recruit PtFOR20p at the developing basal body and to control its length. In contrast, the other basal body specific centrin, PtCen3p, is not needed for assembly of the transition zone, but is required downstream, for basal body docking. Comparison of the structural defects induced by depletion of PtFOR20p, PtCen2p or PtCen3p respectively illustrates the dual role of the transition zone in the biogenesis of the basal body and in cilium assembly. The multiple potential roles of the transition zone during basal body biogenesis and the evolutionary conserved function of the FOP proteins in microtubule membrane interactions are discussed.
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130
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Drevensek S, Goussot M, Duroc Y, Christodoulidou A, Steyaert S, Schaefer E, Duvernois E, Grandjean O, Vantard M, Bouchez D, Pastuglia M. The Arabidopsis TRM1-TON1 interaction reveals a recruitment network common to plant cortical microtubule arrays and eukaryotic centrosomes. THE PLANT CELL 2012; 24:178-91. [PMID: 22286137 PMCID: PMC3289559 DOI: 10.1105/tpc.111.089748] [Citation(s) in RCA: 96] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2011] [Revised: 11/29/2011] [Accepted: 01/03/2012] [Indexed: 05/19/2023]
Abstract
Land plant cells assemble microtubule arrays without a conspicuous microtubule organizing center like a centrosome. In Arabidopsis thaliana, the TONNEAU1 (TON1) proteins, which share similarity with FOP, a human centrosomal protein, are essential for microtubule organization at the cortex. We have identified a novel superfamily of 34 proteins conserved in land plants, the TON1 Recruiting Motif (TRM) proteins, which share six short conserved motifs, including a TON1-interacting motif present in all TRMs. An archetypal member of this family, TRM1, is a microtubule-associated protein that localizes to cortical microtubules and binds microtubules in vitro. Not all TRM proteins can bind microtubules, suggesting a diversity of functions for this family. In addition, we show that TRM1 interacts in vivo with TON1 and is able to target TON1 to cortical microtubules via its C-terminal TON1 interaction motif. Interestingly, three motifs of TRMs are found in CAP350, a human centrosomal protein interacting with FOP, and the C-terminal M2 motif of CAP350 is responsible for FOP recruitment at the centrosome. Moreover, we found that TON1 can interact with the human CAP350 M2 motif in yeast. Taken together, our results suggest conservation of eukaryotic centrosomal components in plant cells.
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Affiliation(s)
- Stéphanie Drevensek
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Magali Goussot
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Yann Duroc
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Anna Christodoulidou
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Sylvie Steyaert
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Estelle Schaefer
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Evelyne Duvernois
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Olivier Grandjean
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
| | - Marylin Vantard
- Institut de Recherches en Technologies et Sciences pour le Vivant, Commissariat à l’Energie Atomique/Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Université Joseph Fourier, 38054 Grenoble, France
| | - David Bouchez
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
- Address correspondence to
| | - Martine Pastuglia
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318, Institut National de la Recherche Agronomique–AgroParisTech, Institut National de la Recherche Agronomique, Centre de Versailles, F-78000 Versailles, France
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131
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Liu P, Qi M, Xue X, Ren H. Dynamics and functions of the actin cytoskeleton during the plant cell cycle. ACTA ACUST UNITED AC 2011. [DOI: 10.1007/s11434-011-4801-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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132
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Van Damme D, De Rybel B, Gudesblat G, Demidov D, Grunewald W, De Smet I, Houben A, Beeckman T, Russinova E. Arabidopsis α Aurora kinases function in formative cell division plane orientation. THE PLANT CELL 2011; 23:4013-24. [PMID: 22045917 PMCID: PMC3246319 DOI: 10.1105/tpc.111.089565] [Citation(s) in RCA: 86] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2011] [Revised: 10/05/2011] [Accepted: 10/12/2011] [Indexed: 05/19/2023]
Abstract
To establish three-dimensional structures/organs, plant cells continuously have to adapt the orientation of their division plane in a highly regulated manner. However, mechanisms underlying switches in division plane orientation remain elusive. Here, we characterize a viable double knockdown mutant in Arabidopsis thaliana group α Aurora (AUR) kinases, AUR1 and AUR2, (aur1-2 aur2-2), with a primary defect in lateral root formation and outgrowth. Mutant analysis revealed that aur1-2 aur2-2 lateral root primordia are built from randomly oriented cell divisions instead of distinct cell layers. This phenotype could be traced back to cytokinesis defects and misoriented cell plates during the initial anticlinal pericycle cell divisions that give rise to lateral root primordia. Complementation assays showed that the Arabidopsis α group Aurora kinases are functionally divergent from the single β group member AUR3 and that AUR1 functions in division plane orientation prior to cytokinesis. In addition to defective lateral root patterning, aur1-2 aur2-2 plants also show defects in orienting formative divisions during embryogenesis, divisions surrounding the main root stem cell niche, and divisions surrounding stomata formation. Taken together, our results put forward a central role for α Aurora kinases in regulating formative division plane orientation throughout development.
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Affiliation(s)
- Daniël Van Damme
- Department of Plant Systems Biology, VIB, B-9052 Ghent, Belgium.
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133
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Malcos JL, Cyr RJ. An ungrouped plant kinesin accumulates at the preprophase band in a cell cycle-dependent manner. Cytoskeleton (Hoboken) 2011; 68:247-58. [PMID: 21387573 DOI: 10.1002/cm.20508] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Past phylogenic studies have identified a plant-specific, ungrouped family of kinesins in which the motor domain does not group to one of the fourteen recognized families. Members of this family contain an N-terminal motor domain, a C-terminal armadillo repeat domain and a conserved destruction box (D-BOX) motif. This domain architecture is unique to plants and to a subset of protists. Further characterization of one representative member from Arabidopsis, Arabidopsis thaliana KINESIN ungrouped clade, gene A (AtKINUa), was completed to ascertain its functional role in plants. Fluorescence confocal microscopy revealed an accumulation of ATKINUA:GFP at the preprophase band (PPB) in a cell cycle-dependent manner in Arabidopsis epidermal cells and tobacco BY-2 cells. Fluorescence accumulation was highest during prophase and decreased after nuclear envelope breakdown. A conserved D-BOX motif was identified through alignment of AtKINU homologous sequences. Mutagenesis work with D-BOX revealed that conserved residues were necessary for the observed degradation pattern of ATKINUA:GFP, as well as the targeted accumulation at the PPB. Overall results suggest that AtKINUa is necessary for normal plant growth and/or development and is likely involved with PPB organization through microtubule association and specific cell cycle regulation. The D-BOX motif may function to bridge microtubule organization with changes that occur during progression through mitosis and may represent a novel regulatory motif in plant microtubule motor proteins.
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Affiliation(s)
- Jennelle L Malcos
- Department of Biology, The Pennsylvania State University, 208 Mueller Laboratory, University Park, Pennsylvania, USA
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134
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Chen R, Binder BM, Garrett WM, Tucker ML, Chang C, Cooper B. Proteomic responses in Arabidopsis thaliana seedlings treated with ethylene. MOLECULAR BIOSYSTEMS 2011; 7:2637-50. [PMID: 21713283 DOI: 10.1039/c1mb05159h] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Ethylene (ET) is a volatile hormone that modulates fruit ripening, plant growth, development and stress responses. Key components of the ET-signaling pathway identified by genetic dissection in Arabidopsis thaliana include five ET receptors, the negative regulator CTR1 and the positive regulator EIN2, all of which localize to the endoplasmic reticulum. Mechanisms of signaling among these proteins are still unresolved and targets of ET responses are not fully known. So, we used mass spectrometry to identify proteins in microsomal membrane preparations from etiolated A. thaliana seedlings maintained in ambient air or treated with ET for 3 h. We compared 3814 proteins from ET-exposed seedlings and controls and identified 304 proteins with significant accumulation changes. The proteins with increased accumulation were involved in ET biosynthesis, cell morphogenesis, oxidative stress and vesicle secretion while those with decreased accumulation were ribosomal proteins and proteins positively regulated by brassinosteroid, another hormone involved in cell elongation. Several proteins, including EIN2, appeared to be differentially phosphorylated upon ET treatment, which suggests that the activity or stability of these proteins may be controlled by phosphorylation. TUA3, a component of microtubules that contributes to cellular morphological change, exhibited both increased accumulation and differential phosphorylation upon ET treatment. To verify the role of TUA3 in the ET response, tua3 mutants were evaluated. Mutant seedlings had altered ET-associated growth movements. The data indicate that ET perception leads to rapid proteomic change and that these changes are an important part of signaling and development. The data serve as a foundation for exploring ET signaling through systems biology.
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Affiliation(s)
- Ruiqiang Chen
- Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA
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135
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The Preprophase Band and Division Site Determination in Land Plants. THE PLANT CYTOSKELETON 2011. [DOI: 10.1007/978-1-4419-0987-9_7] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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136
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Rasmussen CG, Humphries JA, Smith LG. Determination of symmetric and asymmetric division planes in plant cells. ANNUAL REVIEW OF PLANT BIOLOGY 2011; 62:387-409. [PMID: 21391814 DOI: 10.1146/annurev-arplant-042110-103802] [Citation(s) in RCA: 81] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
The cellular organization of plant tissues is determined by patterns of cell division and growth coupled with cellular differentiation. Cells proliferate mainly via symmetric division, whereas asymmetric divisions are associated with initiation of new developmental patterns and cell types. Division planes in both symmetrically and asymmetrically dividing cells are established through the action of a cortical preprophase band (PPB) of cytoskeletal filaments, which is disassembled upon transition to metaphase, leaving behind a cortical division site (CDS) to which the cytokinetic phragmoplast is later guided to position the cell plate. Recent progress has been made in understanding PPB formation and function as well as the nature and function of the CDS. In asymmetrically dividing cells, division plane establishment is governed by cell polarity. Recent work is beginning to shed light on polarization mechanisms in asymmetrically dividing cells, with receptor-like proteins and potential downstream effectors emerging as important players in this process.
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Affiliation(s)
- Carolyn G Rasmussen
- Section of Cell and Developmental Biology, University of California, San Diego, La Jolla, California 92093, USA.
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137
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Rasmussen CG, Sun B, Smith LG. Tangled localization at the cortical division site of plant cells occurs by several mechanisms. J Cell Sci 2010; 124:270-9. [PMID: 21172800 DOI: 10.1242/jcs.073676] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
TANGLED (TAN) is the founding member of a family of plant-specific proteins required for correct orientation of the division plane. Arabidopsis thaliana TAN is localized before prophase until the end of cytokinesis at the cortical division site (CDS), where it appears to help guide the cytokinetic apparatus towards the cortex. We show that TAN is actively recruited to the CDS by distinct mechanisms before and after preprophase band (PPB) disassembly. Colocalization with the PPB is mediated by one region of TAN, whereas another region mediates its recruitment to the CDS during cytokinesis. This second region binds directly to POK1, a kinesin that is required for TAN localization. Although this region of TAN is recruited to the CDS during cytokinesis without first colocalizing with the PPB, pharmacological evidence indicates that the PPB is nevertheless required for both early and late localization of TAN at the CDS. Finally, we show that phosphatase activity is required for maintenance of early but not late TAN localization at the CDS. We propose a new model in which TAN is actively recruited to the CDS by several mechanisms, indicating that the CDS is dynamically modified from prophase through to the completion of cytokinesis.
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Affiliation(s)
- Carolyn G Rasmussen
- University of California, San Diego, Section of Cell and Developmental Biology, 9500 Gilman Dr., La Jolla, CA 92093-0116, USA.
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138
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Spinner L, Pastuglia M, Belcram K, Pegoraro M, Goussot M, Bouchez D, Schaefer DG. The function of TONNEAU1 in moss reveals ancient mechanisms of division plane specification and cell elongation in land plants. Development 2010; 137:2733-42. [PMID: 20663817 DOI: 10.1242/dev.043810] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
The preprophase band (PPB) is a transient ring of microtubules that forms before mitosis in land plants, and delineates the cytokinetic division plane established at telophase. It is one of the few derived traits specific to embryophytes, in which it is involved in the spatial control of cell division. Here we show that loss of function of Physcomitrella patens PpTON1 strongly affects development of the moss gametophore, phenocopying the developmental syndrome observed in Arabidopsis ton1 mutants: mutant leafy shoots display random orientation of cell division and severe defects in cell elongation, which are correlated with absence of PPB formation and disorganization of the cortical microtubule array in interphase cells. In hypomorphic Ppton1 alleles, PPB are still formed, whereas elongation defects are observed, showing the dual function of TON1 in organizing cortical arrays of microtubules during both interphase and premitosis. Ppton1 mutation has no impact on development of the protonema, which is consistent with the documented absence of PPB formation at this stage, apart from alteration of the gravitropic response, uncovering a new function of TON1 proteins in plants. Successful reciprocal cross-complementation between Physcomitrella and Arabidopsis shows conservation of TON1 function during land plant evolution. These results establish the essential role of the PPB in division plane specification in a basal land plant lineage, and provide new information on the function of TON1. They point to an ancient mechanism of cytoskeletal control of division plane positioning and cell elongation in land plants.
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Affiliation(s)
- Lara Spinner
- Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech, Versailles, France
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139
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Jaber E, Thiele K, Kindzierski V, Loderer C, Rybak K, Jürgens G, Mayer U, Söllner R, Wanner G, Assaad FF. A putative TRAPPII tethering factor is required for cell plate assembly during cytokinesis in Arabidopsis. THE NEW PHYTOLOGIST 2010; 187:751-63. [PMID: 20609115 DOI: 10.1111/j.1469-8137.2010.03331.x] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
*At the end of the cell cycle, the plant cell wall is deposited within a membrane compartment referred to as the cell plate. Little is known about the biogenesis of this transient membrane compartment. *We have positionally cloned and characterized a novel Arabidopsis gene, CLUB, identified by mutation. *CLUB/AtTRS130 encodes a putative TRAPPII tethering factor. club mutants are seedling-lethal and have a canonical cytokinesis-defective phenotype, characterized by the appearance of bi- or multinucleate cells with cell wall stubs, gaps and floating walls. Confocal microscopy showed that in club mutants, KNOLLE-positive vesicles formed and accumulated at the cell equator throughout cytokinesis, but failed to assemble into a cell plate. Similarly, electron micrographs showed large vesicles loosely connected as patchy, incomplete cell plates in club root tips. Neither the formation of KNOLLE-positive vesicles nor the delivery of these vesicles to the cell equator appeared to be perturbed in club mutants. Thus, the primary defect in club mutants appears to be an impairment in cell plate assembly. *As a putative tethering factor required for cell plate biogenesis, CLUB/AtTRS130 helps to define the identity of this membrane compartment and comprises an important handle on the regulation of cell plate assembly.
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Affiliation(s)
- Emad Jaber
- Technische Universität München, Botanik, Freising, Germany
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140
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Sedjaï F, Acquaviva C, Chevrier V, Chauvin JP, Coppin E, Aouane A, Coulier F, Tolun A, Pierres M, Birnbaum D, Rosnet O. Control of ciliogenesis by FOR20, a novel centrosome and pericentriolar satellite protein. J Cell Sci 2010; 123:2391-401. [DOI: 10.1242/jcs.065045] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Cilia and flagella are evolutionary conserved organelles that generate fluid movement and locomotion, and play roles in chemosensation, mechanosensation and intracellular signalling. In complex organisms, cilia are highly diversified, which allows them to perform various functions; however, they retain a 9+0 or 9+2 microtubules structure connected to a basal body. Here, we describe FOR20 (FOP-related protein of 20 kDa), a previously uncharacterized and highly conserved protein that is required for normal formation of a primary cilium. FOR20 is found in PCM1-enriched pericentriolar satellites and centrosomes. FOR20 contains a Lis1-homology domain that promotes self-interaction and is required for its satellite localization. Inhibition of FOR20 expression in RPE1 cells decreases the percentage of ciliated cells and the length of the cilium on ciliated cells. It also modifies satellite distribution, as judged by PCM1 staining, and displaces PCM1 from a detergent-insoluble to a detergent-soluble fraction. The subcellular distribution of satellites is dependent on both microtubule integrity and molecular motor activities. Our results suggest that FOR20 could be involved in regulating the interaction of PCM1 satellites with microtubules and motors. The role of FOR20 in primary cilium formation could therefore be linked to its function in regulating pericentriolar satellites. A role for FOR20 at the basal body itself is also discussed.
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Affiliation(s)
- Fatima Sedjaï
- Centre de Recherche en Cancérologie de Marseille, UMR 891 INSERM, F-13009 Marseille, France
- Institut Paoli-Calmettes, F-13009 Marseille, France
- Université de la Méditerranée, F-13007 Marseille, France
| | - Claire Acquaviva
- Centre de Recherche en Cancérologie de Marseille, UMR 891 INSERM, F-13009 Marseille, France
- Institut Paoli-Calmettes, F-13009 Marseille, France
- Université de la Méditerranée, F-13007 Marseille, France
| | - Véronique Chevrier
- Centre de Recherche en Cancérologie de Marseille, UMR 891 INSERM, F-13009 Marseille, France
- Institut Paoli-Calmettes, F-13009 Marseille, France
- Université de la Méditerranée, F-13007 Marseille, France
| | - Jean-Paul Chauvin
- Université de la Méditerranée, F-13007 Marseille, France
- Institut de Biologie du Développement de Marseille-Luminy, UMR 6216 CNRS, F-13009 Marseille, France
| | - Emilie Coppin
- Centre de Recherche en Cancérologie de Marseille, UMR 891 INSERM, F-13009 Marseille, France
- Institut Paoli-Calmettes, F-13009 Marseille, France
- Université de la Méditerranée, F-13007 Marseille, France
| | - Aicha Aouane
- Université de la Méditerranée, F-13007 Marseille, France
- Institut de Biologie du Développement de Marseille-Luminy, UMR 6216 CNRS, F-13009 Marseille, France
| | - François Coulier
- Centre de Recherche en Cancérologie de Marseille, UMR 891 INSERM, F-13009 Marseille, France
- Institut Paoli-Calmettes, F-13009 Marseille, France
- Université de la Méditerranée, F-13007 Marseille, France
| | - Aslihan Tolun
- Department of Molecular Biology and Genetics, Boǧaziçi University, Istanbul 34342, Turkey
| | - Michel Pierres
- Université de la Méditerranée, F-13007 Marseille, France
- Centre d'Immunologie de Marseille-Luminy, UMR 6102 INSERM/CNRS, F-13009 Marseille, France
| | - Daniel Birnbaum
- Centre de Recherche en Cancérologie de Marseille, UMR 891 INSERM, F-13009 Marseille, France
- Institut Paoli-Calmettes, F-13009 Marseille, France
- Université de la Méditerranée, F-13007 Marseille, France
| | - Olivier Rosnet
- Centre de Recherche en Cancérologie de Marseille, UMR 891 INSERM, F-13009 Marseille, France
- Institut Paoli-Calmettes, F-13009 Marseille, France
- Université de la Méditerranée, F-13007 Marseille, France
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141
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Lee JH, Yoon HJ, Terzaghi W, Martinez C, Dai M, Li J, Byun MO, Deng XW. DWA1 and DWA2, two Arabidopsis DWD protein components of CUL4-based E3 ligases, act together as negative regulators in ABA signal transduction. THE PLANT CELL 2010; 22:1716-32. [PMID: 20525848 PMCID: PMC2910972 DOI: 10.1105/tpc.109.073783] [Citation(s) in RCA: 205] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2009] [Revised: 05/05/2010] [Accepted: 05/17/2010] [Indexed: 05/19/2023]
Abstract
To elucidate potential roles of CUL4-DDB1-DWD (for Cullin 4-Damaged DNA Binding1-DDB1 binding WD40) E3 ligases in abscisic acid (ABA) signaling, we examined ABA sensitivities of T-DNA mutants of a number of Arabidopsis thaliana DWD genes, which encode substrate receptors for CUL4 E3 ligases. Mutants in two DWD genes, DWA1 and DWA2 (DWD hypersensitive to ABA1 and 2), had ABA-hypersensitive phenotypes. Both proteins interacted with DDB1 in yeast two-hybrid assays and associated with DDB1 and CUL4 in vivo, implying they could form CUL4-based complexes. Several ABA-responsive genes were hyperinduced in both mutants, and the ABA-responsive transcription factors ABA INSENSITIVE 5 (ABI5) and MYC2 accumulated to high levels in the mutants after ABA treatment. Moreover, ABI5 interacted with DWA1 and DWA2 in vivo. Cell-free degradation assays showed ABI5 was degraded more slowly in dwa1 and dwa2 than in wild-type cell extracts. Therefore, DWA1 and/or DWA2 may be the substrate receptors for a CUL4 E3 ligase that targets ABI5 for degradation. Our data indicate that DWA1 and DWA2 can directly interact with each other, and their double mutants exhibited enhanced ABA and NaCl hypersensitivities, implying they can act together. This report thus describes a previously unknown heterodimeric cooperation between two independent substrate receptors for CUL4-based E3 ligases.
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Affiliation(s)
- Jae-Hoon Lee
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104
| | - Hye-Jin Yoon
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104
- Department of Molecular Physiology and Biochemistry, National Institute of Agricultural Biotechnology, Rural Development Administration, Suwon 441-707, Korea
| | - William Terzaghi
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104
- Department of Biology, Wilkes University, Wilkes-Barre, Pennsylvania 18766
| | - Cristina Martinez
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104
| | - Mingqiu Dai
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104
| | - Jigang Li
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104
| | - Myung-Ok Byun
- Department of Molecular Physiology and Biochemistry, National Institute of Agricultural Biotechnology, Rural Development Administration, Suwon 441-707, Korea
| | - Xing Wang Deng
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104
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142
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Bug22p, a conserved centrosomal/ciliary protein also present in higher plants, is required for an effective ciliary stroke in Paramecium. EUKARYOTIC CELL 2010; 9:645-55. [PMID: 20118210 DOI: 10.1128/ec.00368-09] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Centrioles, cilia, and flagella are ancestral conserved organelles of eukaryotic cells. Among the proteins identified in the proteomics of ciliary proteins in Paramecium, we focus here on a protein, Bug22p, previously detected by cilia and basal-body high-throughput studies but never analyzed per se. Remarkably, this protein is also present in plants, which lack centrioles and cilia. Bug22p sequence alignments revealed consensus positions that distinguish species with centrioles/cilia from plants. In Paramecium, antibody and green fluorescent protein (GFP) fusion labeling localized Bug22p in basal bodies and cilia, and electron microscopy immunolabeling refined the localization to the terminal plate of the basal bodies, the transition zone, and spots along the axoneme, preferentially between the membrane and the microtubules. RNA interference (RNAi) depletion of Bug22p provoked a strong decrease in swimming speed, followed by cell death after a few days. High-speed video microscopy and morphological analysis of Bug22p-depleted cells showed that the protein plays an important role in the efficiency of ciliary movement by participating in the stroke shape and rigidity of cilia. The defects in cell swimming and growth provoked by RNAi can be complemented by expression of human Bug22p. This is the first reported case of complementation by a human gene in a ciliate.
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143
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Abstract
Ca2+ ions play a vital role as second messengers in plant cells during various developmental processes and in response to environmental stimuli. Plants have evolved a diversity of unique proteins that bind Ca2+ using the evolutionarily conserved EF-hand motif. The currently held hypothesis is that these proteins function as Ca2+ sensors by undergoing conformational changes in response to Ca2+-binding that facilitate their regulation of target proteins and thereby co-ordinate various signalling pathways. The three main classes of these EF-hand Ca2+sensors in plants are CaMs [calmodulins; including CMLs (CaM-like proteins)], CDPKs (calcium-dependent protein kinases) and CBLs (calcineurin B-like proteins). In the plant species examined to date, each of these classes is represented by a large family of proteins, most of which have not been characterized biochemically and whose physiological roles remain unclear. In the present review, we discuss recent advances in research on CaMs and CMLs, CDPKs and CBLs, and we attempt to integrate the current knowledge on the different sensor classes into common physiological themes.
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144
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Liu Z, Zhu Y, Gao J, Yu F, Dong A, Shen WH. Molecular and reverse genetic characterization of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) genes unravels their function in transcription and nucleotide excision repair in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2009; 59:27-38. [PMID: 19228338 DOI: 10.1111/j.1365-313x.2009.03844.x] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Compared with the well-studied biochemical function of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) as a histone chaperone in nucleosome assembly/disassembly, the physiological roles of NAP1 remain largely uncharacterized. Here, we define the NAP1 gene family members in Arabidopsis, examine their molecular properties, and use reverse genetics to characterize their biological roles. We show that the four AtNAP1-group proteins can form homodimers and heterodimers, can bind histone H2A, and are localized abundantly in the cytoplasm and weakly in the nucleus at steady state. AtNAP1;4 differs from the others by showing inhibitor-sensitive nucleocytoplasmic shuttling and tissue-specific expression, restricted to root segments and pollen grains. The other three AtNAP1 genes are ubiquitously expressed in plants and the AtNAP1;3 protein is detected as the major isoform in seedlings. We show that disruption of the AtNAP1-group genes does not affect normal plant growth under our laboratory conditions. Interestingly, two allelic triple mutants, Atnap1;1-1 Atnap1;2-1 Atnap1;3-1 and Atnap1;1-1 Atnap1;2-1 Atnap1;3-2, exhibit perturbed genome transcription, and show hypersensitivity to DNA damage caused by UV-C irradiation. We show that AtNAP1;3 binds chromatin, with enrichment at some genes involved in the nucleotide excision repair (NER) pathway, and that the expression of these genes is downregulated in the triple mutants. Taken together, our results highlight conserved and isoform-specific properties of AtNAP1 proteins, and unravel their function in the NER pathway of DNA damage repair.
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Affiliation(s)
- Ziqiang Liu
- State Key Laboratory of Genetic Engineering, Department of Biochemistry, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai 200433, PR China
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145
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Müller S, Wright AJ, Smith LG. Division plane control in plants: new players in the band. Trends Cell Biol 2009; 19:180-8. [PMID: 19285867 DOI: 10.1016/j.tcb.2009.02.002] [Citation(s) in RCA: 90] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2008] [Revised: 02/02/2009] [Accepted: 02/02/2009] [Indexed: 01/03/2023]
Abstract
Unique mechanisms are used to orient cell division planes in plants. A cortical ring of cytoskeletal filaments called the preprophase band (PPB) predicts the future division plane during G2 and is disassembled as the mitotic spindle forms, leaving behind a 'cortical division site' (CDS) that guides the placement of the new cell wall (cell plate) during cytokinesis. The molecular features of the CDS have remained elusive for decades. Recently, a few proteins have at last been identified that are specifically localized to or excluded from the CDS and that participate in the orientation, attachment or maturation of cell plates. Recent progress has also been made in identifying proteins needed for PPB formation and thus for division plane establishment.
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Affiliation(s)
- Sabine Müller
- Zentrum für Molekularbiologie der Pflanzen, Universität Tübingen, Auf der Morgenstelle, Germany.
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146
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Guo Y. Evaluating the microtubule cytoskeleton and its interacting proteins in monocots by mining the rice genome. ANNALS OF BOTANY 2009; 103. [PMID: 19106179 PMCID: PMC2707882 DOI: 10.1093/aob/mcp023] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
BACKGROUND Microtubules (MTs) are assembled by heterodimers of alpha- and beta-tubulins, which provide tracks for directional transport and frameworks for the spindle apparatus and the phragmoplast. MT nucleation and dynamics are regulated by components such as the gamma-tubulin complex which are conserved among eukaryotes, and other components which are unique to plants. Following remarkable progress made in the model plant Arabidopsis thaliana toward revealing key components regulating MT activities, the completed rice (Oryza sativa) genome has prompted a survey of the MT cytoskeleton in this important crop as a model for monocots. SCOPE The rice genome contains three alpha-tubulin genes, eight beta-tubulin genes and a single gamma-tubulin gene. A functional gamma-tubulin ring complex is expected to form in rice as genes encoding all components of the complex are present. Among proteins that interact with MTs, compared with A. thaliana, rice has more genes encoding some members such as the MAP65/Ase1p/PRC1 family, but fewer for the motor kinesins, the end-binding protein EB1 and the mitotic kinase Aurora. Although most known MT-interacting factors have apparent orthologues in rice, no orthologues of arabidopsis RIC1 and MAP18 have been identified in rice. Among all proteins surveyed here, only a few have had their functions characterized by genetic means in rice. Elucidating functions of proteins of the rice MT cytoskeleton, aided by recent technical advances made in this model monocot, will greatly advance our knowledge of how monocots employ their MTs to regulate their growth and form.
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147
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Guo L, Ho CMK, Kong Z, Lee YRJ, Qian Q, Liu B. Evaluating the microtubule cytoskeleton and its interacting proteins in monocots by mining the rice genome. ANNALS OF BOTANY 2009; 103:387-402. [PMID: 19106179 PMCID: PMC2707338 DOI: 10.1093/aob/mcn248] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2008] [Revised: 10/20/2008] [Accepted: 11/17/2008] [Indexed: 05/20/2023]
Abstract
BACKGROUND Microtubules (MTs) are assembled by heterodimers of alpha- and beta-tubulins, which provide tracks for directional transport and frameworks for the spindle apparatus and the phragmoplast. MT nucleation and dynamics are regulated by components such as the gamma-tubulin complex which are conserved among eukaryotes, and other components which are unique to plants. Following remarkable progress made in the model plant Arabidopsis thaliana toward revealing key components regulating MT activities, the completed rice (Oryza sativa) genome has prompted a survey of the MT cytoskeleton in this important crop as a model for monocots. SCOPE The rice genome contains three alpha-tubulin genes, eight beta-tubulin genes and a single gamma-tubulin gene. A functional gamma-tubulin ring complex is expected to form in rice as genes encoding all components of the complex are present. Among proteins that interact with MTs, compared with A. thaliana, rice has more genes encoding some members such as the MAP65/Ase1p/PRC1 family, but fewer for the motor kinesins, the end-binding protein EB1 and the mitotic kinase Aurora. Although most known MT-interacting factors have apparent orthologues in rice, no orthologues of arabidopsis RIC1 and MAP18 have been identified in rice. Among all proteins surveyed here, only a few have had their functions characterized by genetic means in rice. Elucidating functions of proteins of the rice MT cytoskeleton, aided by recent technical advances made in this model monocot, will greatly advance our knowledge of how monocots employ their MTs to regulate their growth and form.
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Affiliation(s)
- Longbiao Guo
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310006, China
- Department of Plant Biology, University of California, Davis, CA 95616, USA
| | - Chin-Min Kimmy Ho
- Department of Plant Biology, University of California, Davis, CA 95616, USA
| | - Zhaosheng Kong
- Department of Plant Biology, University of California, Davis, CA 95616, USA
| | - Yuh-Ru Julie Lee
- Department of Plant Biology, University of California, Davis, CA 95616, USA
| | - Qian Qian
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310006, China
| | - Bo Liu
- Department of Plant Biology, University of California, Davis, CA 95616, USA
- For correspondence. E-mail:
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148
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Wright AJ, Gallagher K, Smith LG. discordia1 and alternative discordia1 function redundantly at the cortical division site to promote preprophase band formation and orient division planes in maize. THE PLANT CELL 2009; 21:234-47. [PMID: 19168717 PMCID: PMC2648079 DOI: 10.1105/tpc.108.062810] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2008] [Revised: 12/15/2008] [Accepted: 01/06/2009] [Indexed: 05/18/2023]
Abstract
In plants, cell wall placement during cytokinesis is determined by the position of the preprophase band (PPB) and the subsequent expansion of the phragmoplast, which deposits the new cell wall, to the cortical division site delineated by the PPB. New cell walls are often incorrectly oriented during asymmetric cell divisions in the leaf epidermis of maize (Zea mays) discordia1 (dcd1) mutants, and this defect is associated with aberrant PPB formation in asymmetrically dividing cells. dcd1 was cloned and encodes a putative B'' regulatory subunit of the PP2A phosphatase complex highly similar to Arabidopsis thaliana FASS/TONNEAU2, which is required for PPB formation. We also identified alternative discordia1 (add1), a second gene in maize nearly identical to dcd1. While loss of add1 function does not produce a noticeable phenotype, knock down of both genes in add1(RNAi) dcd1(RNAi) plants prevents PPB formation and causes misorientation of symmetric and asymmetric cell divisions. Immunolocalization studies with an antibody that recognizes both DCD1 and ADD1 showed that these proteins colocalize with PPBs and remain at the cortical division site through metaphase. Our results indicate that DCD1 and ADD1 function in PPB formation, that this function is more critical in asymmetrically dividing cells than in symmetrically dividing cells, and that DCD1/ADD1 may have other roles in addition to promoting PPB formation at the cortical division site.
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Affiliation(s)
- Amanda J Wright
- Section of Cell and Developmental Biology, University of California, San Diego, La Jolla, California 92093-0116, USA.
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