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For: Roguev A, Bandyopadhyay S, Zofall M, Zhang K, Fischer T, Collins SR, Qu H, Shales M, Park HO, Hayles J, Hoe KL, Kim DU, Ideker T, Grewal SI, Weissman JS, Krogan NJ. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Science 2008;322:405-10. [PMID: 18818364 DOI: 10.1126/science.1162609] [Citation(s) in RCA: 297] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Number Cited by Other Article(s)
201
Pan XY, Tian Y, Huang Y, Shen HB. Towards better accuracy for missing value estimation of epistatic miniarray profiling data by a novel ensemble approach. Genomics 2011;97:257-64. [PMID: 21397683 DOI: 10.1016/j.ygeno.2011.03.001] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2010] [Revised: 02/15/2011] [Accepted: 03/03/2011] [Indexed: 12/31/2022]
202
Strålfors A, Walfridsson J, Bhuiyan H, Ekwall K. The FUN30 chromatin remodeler, Fft3, protects centromeric and subtelomeric domains from euchromatin formation. PLoS Genet 2011;7:e1001334. [PMID: 21437270 PMCID: PMC3060074 DOI: 10.1371/journal.pgen.1001334] [Citation(s) in RCA: 67] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2010] [Accepted: 02/11/2011] [Indexed: 11/18/2022]  Open
203
Reddy BD, Wang Y, Niu L, Higuchi EC, Marguerat SB, Bähler J, Smith GR, Jia S. Elimination of a specific histone H3K14 acetyltransferase complex bypasses the RNAi pathway to regulate pericentric heterochromatin functions. Genes Dev 2011;25:214-9. [PMID: 21289066 DOI: 10.1101/gad.1993611] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
204
Poyatos JF. The balance of weak and strong interactions in genetic networks. PLoS One 2011;6:e14598. [PMID: 21347355 PMCID: PMC3037365 DOI: 10.1371/journal.pone.0014598] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2010] [Accepted: 12/29/2010] [Indexed: 11/19/2022]  Open
205
Penny DJ, Vick GW. Novel therapies in childhood heart failure: today and tomorrow. Heart Fail Clin 2011;6:591-621, x. [PMID: 20869655 DOI: 10.1016/j.hfc.2010.06.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
206
Lee I. Probabilistic functional gene societies. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2011;106:435-42. [PMID: 21281658 DOI: 10.1016/j.pbiomolbio.2011.01.003] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2010] [Revised: 12/29/2010] [Accepted: 01/18/2011] [Indexed: 11/25/2022]
207
Epistatic relationships reveal the functional organization of yeast transcription factors. Mol Syst Biol 2011;6:420. [PMID: 20959818 DOI: 10.1038/msb.2010.77] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2009] [Accepted: 08/27/2010] [Indexed: 11/09/2022]  Open
208
Hou L, Wang L, Qian M, Li D, Tang C, Zhu Y, Deng M, Li F. Modular analysis of the probabilistic genetic interaction network. ACTA ACUST UNITED AC 2011;27:853-9. [PMID: 21278184 PMCID: PMC3051332 DOI: 10.1093/bioinformatics/btr031] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
209
Shou C, Bhardwaj N, Lam HYK, Yan KK, Kim PM, Snyder M, Gerstein MB. Measuring the evolutionary rewiring of biological networks. PLoS Comput Biol 2011;7:e1001050. [PMID: 21253555 PMCID: PMC3017101 DOI: 10.1371/journal.pcbi.1001050] [Citation(s) in RCA: 87] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2010] [Accepted: 12/03/2010] [Indexed: 11/18/2022]  Open
210
Arita Y, Nishimura S, Matsuyama A, Yashiroda Y, Usui T, Boone C, Yoshida M. Microarray-based target identification using drug hypersensitive fission yeast expressing ORFeome. MOLECULAR BIOSYSTEMS 2011;7:1463-72. [DOI: 10.1039/c0mb00326c] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
211
Babu M, Gagarinova A, Greenblatt J, Emili A. Array-based synthetic genetic screens to map bacterial pathways and functional networks in Escherichia coli. Methods Mol Biol 2011;765:125-153. [PMID: 21815091 DOI: 10.1007/978-1-61779-197-0_9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
212
Array-based synthetic genetic screens to map bacterial pathways and functional networks in Escherichia coli. Methods Mol Biol 2011;781:99-126. [PMID: 21877280 DOI: 10.1007/978-1-61779-276-2_7] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
213
Tuzmen S, Tuzmen P, Arora S, Mousses S, Azorsa D. RNAi-based functional pharmacogenomics. Methods Mol Biol 2011;700:271-90. [PMID: 21204040 DOI: 10.1007/978-1-61737-954-3_18] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
214
Reverse genetics in eukaryotes. Biol Cell 2010;102:561-80. [PMID: 20812916 DOI: 10.1042/bc20100038] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
215
Nichols RJ, Sen S, Choo YJ, Beltrao P, Zietek M, Chaba R, Lee S, Kazmierczak KM, Lee KJ, Wong A, Shales M, Lovett S, Winkler ME, Krogan NJ, Typas A, Gross CA. Phenotypic landscape of a bacterial cell. Cell 2010;144:143-56. [PMID: 21185072 DOI: 10.1016/j.cell.2010.11.052] [Citation(s) in RCA: 520] [Impact Index Per Article: 34.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2010] [Revised: 11/07/2010] [Accepted: 11/24/2010] [Indexed: 01/09/2023]
216
Systematic screen of Schizosaccharomyces pombe deletion collection uncovers parallel evolution of the phosphate signal transduction pathway in yeasts. EUKARYOTIC CELL 2010;10:198-206. [PMID: 21169418 DOI: 10.1128/ec.00216-10] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
217
Zaratiegui M, Vaughn MW, Irvine DV, Goto D, Watt S, Bähler J, Arcangioli B, Martienssen RA. CENP-B preserves genome integrity at replication forks paused by retrotransposon LTR. Nature 2010;469:112-5. [PMID: 21151105 PMCID: PMC3057531 DOI: 10.1038/nature09608] [Citation(s) in RCA: 72] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2010] [Accepted: 10/22/2010] [Indexed: 11/25/2022]
218
Bandyopadhyay S, Mehta M, Kuo D, Sung MK, Chuang R, Jaehnig EJ, Bodenmiller B, Licon K, Copeland W, Shales M, Fiedler D, Dutkowski J, Guénolé A, van Attikum H, Shokat KM, Kolodner RD, Huh WK, Aebersold R, Keogh MC, Krogan NJ, Ideker T. Rewiring of genetic networks in response to DNA damage. Science 2010;330:1385-9. [PMID: 21127252 PMCID: PMC3006187 DOI: 10.1126/science.1195618] [Citation(s) in RCA: 324] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
219
Baryshnikova A, Costanzo M, Kim Y, Ding H, Koh J, Toufighi K, Youn JY, Ou J, San Luis BJ, Bandyopadhyay S, Hibbs M, Hess D, Gingras AC, Bader GD, Troyanskaya OG, Brown GW, Andrews B, Boone C, Myers CL. Quantitative analysis of fitness and genetic interactions in yeast on a genome scale. Nat Methods 2010;7:1017-24. [PMID: 21076421 PMCID: PMC3117325 DOI: 10.1038/nmeth.1534] [Citation(s) in RCA: 263] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2010] [Accepted: 10/14/2010] [Indexed: 12/27/2022]
220
Costanzo M, Baryshnikova A, Myers CL, Andrews B, Boone C. Charting the genetic interaction map of a cell. Curr Opin Biotechnol 2010;22:66-74. [PMID: 21111604 DOI: 10.1016/j.copbio.2010.11.001] [Citation(s) in RCA: 94] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2010] [Accepted: 11/01/2010] [Indexed: 12/23/2022]
221
Systems biology approaches to dissect mammalian innate immunity. Curr Opin Immunol 2010;23:71-7. [PMID: 21111589 DOI: 10.1016/j.coi.2010.10.022] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2010] [Accepted: 10/29/2010] [Indexed: 01/09/2023]
222
Nijman SMB. Synthetic lethality: general principles, utility and detection using genetic screens in human cells. FEBS Lett 2010;585:1-6. [PMID: 21094158 PMCID: PMC3018572 DOI: 10.1016/j.febslet.2010.11.024] [Citation(s) in RCA: 212] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2010] [Accepted: 11/10/2010] [Indexed: 12/14/2022]
223
van Opijnen T, Camilli A. Genome-wide fitness and genetic interactions determined by Tn-seq, a high-throughput massively parallel sequencing method for microorganisms. CURRENT PROTOCOLS IN MICROBIOLOGY 2010;Chapter 1:Unit1E.3. [PMID: 21053251 PMCID: PMC3877651 DOI: 10.1002/9780471729259.mc01e03s19] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
224
Chuang HY, Hofree M, Ideker T. A decade of systems biology. Annu Rev Cell Dev Biol 2010;26:721-44. [PMID: 20604711 DOI: 10.1146/annurev-cellbio-100109-104122] [Citation(s) in RCA: 203] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
225
Jaimovich A, Rinott R, Schuldiner M, Margalit H, Friedman N. Modularity and directionality in genetic interaction maps. Bioinformatics 2010;26:i228-36. [PMID: 20529911 PMCID: PMC2881382 DOI: 10.1093/bioinformatics/btq197] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]  Open
226
Qiu X, Dul BE, Walworth NC. Activity of a C-terminal plant homeodomain (PHD) of Msc1 is essential for function. J Biol Chem 2010;285:36828-35. [PMID: 20858896 DOI: 10.1074/jbc.m110.157792] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
227
Automated identification of pathways from quantitative genetic interaction data. Mol Syst Biol 2010;6:379. [PMID: 20531408 PMCID: PMC2913392 DOI: 10.1038/msb.2010.27] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2009] [Accepted: 04/07/2010] [Indexed: 01/20/2023]  Open
228
Faucher D, Wellinger RJ. Methylated H3K4, a transcription-associated histone modification, is involved in the DNA damage response pathway. PLoS Genet 2010;6:e1001082. [PMID: 20865123 PMCID: PMC2928815 DOI: 10.1371/journal.pgen.1001082] [Citation(s) in RCA: 119] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2010] [Accepted: 07/22/2010] [Indexed: 01/25/2023]  Open
229
Beltrao P, Cagney G, Krogan NJ. Quantitative genetic interactions reveal biological modularity. Cell 2010;141:739-45. [PMID: 20510918 DOI: 10.1016/j.cell.2010.05.019] [Citation(s) in RCA: 114] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
230
Lee I, Lehner B, Vavouri T, Shin J, Fraser AG, Marcotte EM. Predicting genetic modifier loci using functional gene networks. Genome Res 2010;20:1143-53. [PMID: 20538624 DOI: 10.1101/gr.102749.109] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
231
Kim DU, Hayles J, Kim D, Wood V, Park HO, Won M, Yoo HS, Duhig T, Nam M, Palmer G, Han S, Jeffery L, Baek ST, Lee H, Shim YS, Lee M, Kim L, Heo KS, Noh EJ, Lee AR, Jang YJ, Chung KS, Choi SJ, Park JY, Park Y, Kim HM, Park SK, Park HJ, Kang EJ, Kim HB, Kang HS, Park HM, Kim K, Song K, Song KB, Nurse P, Hoe KL. Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat Biotechnol 2010;28:617-623. [PMID: 20473289 PMCID: PMC3962850 DOI: 10.1038/nbt.1628] [Citation(s) in RCA: 560] [Impact Index Per Article: 37.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2010] [Accepted: 03/30/2010] [Indexed: 01/28/2023]
232
Guo J, Tian D, McKinney BA, Hartman JL. Recursive expectation-maximization clustering: a method for identifying buffering mechanisms composed of phenomic modules. CHAOS (WOODBURY, N.Y.) 2010;20:026103. [PMID: 20590332 PMCID: PMC2909310 DOI: 10.1063/1.3455188] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2010] [Accepted: 05/26/2010] [Indexed: 05/29/2023]
233
Lin A, Wang RT, Ahn S, Park CC, Smith DJ. A genome-wide map of human genetic interactions inferred from radiation hybrid genotypes. Genome Res 2010;20:1122-32. [PMID: 20508145 DOI: 10.1101/gr.104216.109] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
234
Lasker K, Phillips JL, Russel D, Velázquez-Muriel J, Schneidman-Duhovny D, Tjioe E, Webb B, Schlessinger A, Sali A. Integrative structure modeling of macromolecular assemblies from proteomics data. Mol Cell Proteomics 2010;9:1689-702. [PMID: 20507923 DOI: 10.1074/mcp.r110.000067] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
235
Alexopoulos LG, Saez-Rodriguez J, Cosgrove BD, Lauffenburger DA, Sorger PK. Networks inferred from biochemical data reveal profound differences in toll-like receptor and inflammatory signaling between normal and transformed hepatocytes. Mol Cell Proteomics 2010;9:1849-65. [PMID: 20460255 PMCID: PMC2938121 DOI: 10.1074/mcp.m110.000406] [Citation(s) in RCA: 93] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
236
Ryan C, Greene D, Cagney G, Cunningham P. Missing value imputation for epistatic MAPs. BMC Bioinformatics 2010;11:197. [PMID: 20406472 PMCID: PMC2873538 DOI: 10.1186/1471-2105-11-197] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2009] [Accepted: 04/20/2010] [Indexed: 01/07/2023]  Open
237
Ravasi T, Suzuki H, Cannistraci CV, Katayama S, Bajic VB, Tan K, Akalin A, Schmeier S, Kanamori-Katayama M, Bertin N, Carninci P, Daub CO, Forrest ARR, Gough J, Grimmond S, Han JH, Hashimoto T, Hide W, Hofmann O, Kamburov A, Kaur M, Kawaji H, Kubosaki A, Lassmann T, van Nimwegen E, MacPherson CR, Ogawa C, Radovanovic A, Schwartz A, Teasdale RD, Tegnér J, Lenhard B, Teichmann SA, Arakawa T, Ninomiya N, Murakami K, Tagami M, Fukuda S, Imamura K, Kai C, Ishihara R, Kitazume Y, Kawai J, Hume DA, Ideker T, Hayashizaki Y. An atlas of combinatorial transcriptional regulation in mouse and man. Cell 2010;140:744-52. [PMID: 20211142 DOI: 10.1016/j.cell.2010.01.044] [Citation(s) in RCA: 578] [Impact Index Per Article: 38.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2009] [Revised: 09/22/2009] [Accepted: 01/25/2010] [Indexed: 01/04/2023]
238
RNAi-dependent formation of heterochromatin and its diverse functions. Curr Opin Genet Dev 2010;20:134-41. [PMID: 20207534 DOI: 10.1016/j.gde.2010.02.003] [Citation(s) in RCA: 192] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2010] [Revised: 02/02/2010] [Accepted: 02/05/2010] [Indexed: 12/23/2022]
239
Gao H, Granka JM, Feldman MW. On the classification of epistatic interactions. Genetics 2010;184:827-37. [PMID: 20026678 PMCID: PMC2845349 DOI: 10.1534/genetics.109.111120] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2009] [Accepted: 12/20/2009] [Indexed: 11/18/2022]  Open
240
Collins SR, Roguev A, Krogan NJ. Quantitative genetic interaction mapping using the E-MAP approach. Methods Enzymol 2010;470:205-31. [PMID: 20946812 PMCID: PMC2957675 DOI: 10.1016/s0076-6879(10)70009-4] [Citation(s) in RCA: 72] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
241
Nir O, Bakal C, Perrimon N, Berger B. Inference of RhoGAP/GTPase regulation using single-cell morphological data from a combinatorial RNAi screen. Genome Res 2010;20:372-80. [PMID: 20144944 DOI: 10.1101/gr.100248.109] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
242
Young E, Alper H. Synthetic biology: tools to design, build, and optimize cellular processes. J Biomed Biotechnol 2010;2010:130781. [PMID: 20150964 PMCID: PMC2817555 DOI: 10.1155/2010/130781] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2009] [Accepted: 10/28/2009] [Indexed: 11/17/2022]  Open
243
Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks. Nat Genet 2010;42:272-6. [PMID: 20101242 PMCID: PMC2837480 DOI: 10.1038/ng.524] [Citation(s) in RCA: 106] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2009] [Accepted: 12/18/2009] [Indexed: 11/30/2022]
244
Jørgensen C, Linding R. Simplistic pathways or complex networks? Curr Opin Genet Dev 2010;20:15-22. [PMID: 20096559 DOI: 10.1016/j.gde.2009.12.003] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2009] [Revised: 12/17/2009] [Accepted: 12/28/2009] [Indexed: 01/09/2023]
245
Hou H, Wang Y, Kallgren SP, Thompson J, Yates JR, Jia S. Histone variant H2A.Z regulates centromere silencing and chromosome segregation in fission yeast. J Biol Chem 2010;285:1909-18. [PMID: 19910462 PMCID: PMC2804349 DOI: 10.1074/jbc.m109.058487] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2009] [Revised: 11/12/2009] [Indexed: 11/06/2022]  Open
246
Post-reductionist protein science, or putting Humpty Dumpty back together again. Nat Chem Biol 2010;5:774-7. [PMID: 19841622 DOI: 10.1038/nchembio.241] [Citation(s) in RCA: 95] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
247
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