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Kumar V, Krolewski DM, Hebda-Bauer EK, Parsegian A, Martin B, Foltz M, Akil H, Watson SJ. Optimization and evaluation of fluorescence in situ hybridization chain reaction in cleared fresh-frozen brain tissues. Brain Struct Funct 2021; 226:481-499. [PMID: 33386994 DOI: 10.1007/s00429-020-02194-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Accepted: 11/27/2020] [Indexed: 11/27/2022]
Abstract
Transcript labeling in intact tissues using in situ hybridization chain reaction has potential to provide vital spatiotemporal information for molecular characterization of heterogeneous neuronal populations. However, large tissue labeling in non-perfused or fresh-frozen rodent and postmortem human samples, which provide more flexible utilization than perfused tissues, is largely unexplored. In the present study, we optimized the combination of in situ hybridization chain reaction in fresh-frozen rodent brains and then evaluated the uniformity of neuronal labeling between two clearing methods, CLARITY and iDISCO+. We found that CLARITY yielded higher signal-to-noise ratios but more limited imaging depth and required longer clearing times, whereas, iDISCO+ resulted in better tissue clearing, greater imaging depth and a more uniform labeling of larger samples. Based on these results, we used iDISCO+-cleared fresh-frozen rodent brains to further validate this combination and map the expression of a few genes of interest pertaining to mood disorders. We then examined the potential of in situ hybridization chain reaction to label transcripts in cleared postmortem human brain tissues. The combination failed to produce adequate mRNA labeling in postmortem human cortical slices but produced visually adequate labeling in the cerebellum tissues. We next, investigated the multiplexing ability of in situ hybridization chain reaction in cleared tissues which revealed inconsistent fluorescence output depending upon the fluorophore conjugated to the hairpins. Finally, we applied our optimized protocol to assess the effect of glucocorticoid receptor overexpression on basal somatostatin expression in the mouse cortex. The constitutive glucocorticoid receptor overexpression resulted in lower number density of somatostatin-expressing neurons compared to wild type. Overall, the combination of in situ hybridization chain reaction with clearing methods, especially iDISCO+, may find broad application in the transcript analysis in rodent studies, but its limited use in postmortem human tissues can be improved by further optimizations.
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Affiliation(s)
- Vivek Kumar
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA.
| | - David M Krolewski
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA
| | - Elaine K Hebda-Bauer
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA
| | - Aram Parsegian
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA
| | - Brian Martin
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA
| | - Matthew Foltz
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA
| | - Huda Akil
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA
| | - Stanley J Watson
- Michigan Neuroscience Institute, University of Michigan, 205 Zina Pitcher pl, Ann Arbor, MI, 48109, USA
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Brockway DF, Crowley NA. Turning the 'Tides on Neuropsychiatric Diseases: The Role of Peptides in the Prefrontal Cortex. Front Behav Neurosci 2020; 14:588400. [PMID: 33192369 PMCID: PMC7606924 DOI: 10.3389/fnbeh.2020.588400] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Accepted: 09/09/2020] [Indexed: 12/15/2022] Open
Abstract
Recent advancements in technology have enabled researchers to probe the brain with the greater region, cell, and receptor specificity. These developments have allowed for a more thorough understanding of how regulation of the neurophysiology within a region is essential for maintaining healthy brain function. Stress has been shown to alter the prefrontal cortex (PFC) functioning, and evidence links functional impairments in PFC brain activity with neuropsychiatric disorders. Moreover, a growing body of literature highlights the importance of neuropeptides in the PFC to modulate neural signaling and to influence behavior. The converging evidence outlined in this review indicates that neuropeptides in the PFC are specifically impacted by stress, and are found to be dysregulated in numerous stress-related neuropsychiatric disorders including substance use disorder, major depressive disorder (MDD), posttraumatic stress disorder, and schizophrenia. This review explores how neuropeptides in the PFC function to regulate the neural activity, and how genetic and environmental factors, such as stress, lead to dysregulation in neuropeptide systems, which may ultimately contribute to the pathology of neuropsychiatric diseases.
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Affiliation(s)
- Dakota F Brockway
- Neuroscience Curriculum, Pennsylvania State University, University Park, PA, United States
| | - Nicole A Crowley
- Neuroscience Curriculum, Pennsylvania State University, University Park, PA, United States.,The Department of Biology, Pennsylvania State University, University Park, PA, United States
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Judaš M, Sedmak G, Pletikos M, Jovanov-Milošević N. Populations of subplate and interstitial neurons in fetal and adult human telencephalon. J Anat 2011; 217:381-99. [PMID: 20979586 DOI: 10.1111/j.1469-7580.2010.01284.x] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
In the adult human telencephalon, subcortical (gyral) white matter contains a special population of interstitial neurons considered to be surviving descendants of fetal subplate neurons [Kostovic & Rakic (1980) Cytology and the time of origin of interstitial neurons in the white matter in infant and adult human and monkey telencephalon. J Neurocytol9, 219]. We designate this population of cells as superficial (gyral) interstitial neurons and describe their morphology and distribution in the postnatal and adult human cerebrum. Human fetal subplate neurons cannot be regarded as interstitial, because the subplate zone is an essential part of the fetal cortex, the major site of synaptogenesis and the 'waiting' compartment for growing cortical afferents, and contains both projection neurons and interneurons with distinct input-output connectivity. However, although the subplate zone is a transient fetal structure, many subplate neurons survive postnatally as superficial (gyral) interstitial neurons. The fetal white matter is represented by the intermediate zone and well-defined deep periventricular tracts of growing axons, such as the corpus callosum, anterior commissure, internal and external capsule, and the fountainhead of the corona radiata. These tracts gradually occupy the territory of transient fetal subventricular and ventricular zones.The human fetal white matter also contains distinct populations of deep fetal interstitial neurons, which, by virtue of their location, morphology, molecular phenotypes and advanced level of dendritic maturation, remain distinct from subplate neurons and neurons in adjacent structures (e.g. basal ganglia, basal forebrain). We describe the morphological, histochemical (nicotinamide-adenine dinucleotide phosphate-diaphorase) and immunocytochemical (neuron-specific nuclear protein, microtubule-associated protein-2, calbindin, calretinin, neuropeptide Y) features of both deep fetal interstitial neurons and deep (periventricular) interstitial neurons in the postnatal and adult deep cerebral white matter (i.e. corpus callosum, anterior commissure, internal and external capsule and the corona radiata/centrum semiovale). Although these deep interstitial neurons are poorly developed or absent in the brains of rodents, they represent a prominent feature of the significantly enlarged white matter of human and non-human primate brains.
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Affiliation(s)
- Miloš Judaš
- University of Zagreb School of Medicine, Croatian Institute for Brain Research, Salata 12, Zagreb, Croatia.
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Colombo JA, Bentham C. Immunohistochemical analysis of subcortical white matter astroglia of infant and adult primate brains, with a note on resident neurons. Brain Res 2006; 1100:93-103. [PMID: 16765327 DOI: 10.1016/j.brainres.2006.04.116] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2006] [Revised: 04/28/2006] [Accepted: 04/29/2006] [Indexed: 11/26/2022]
Abstract
An immunohistochemical analysis of brain subcortical white matter astroglia from human (infant, adult) and adult monkey (Cebus apella, Macaca nemestrina) cases without any known neurological disease, is described. Expression of synaptic vesicle-associated proteins, excitatory amino acid transporters (EAAT1 and EAAT2) and GABAA Ralpha2 receptor produced coarse punctate labeling in human adult white matter astrocytes. A finer, generalized, punctate labeling was observed in human infants and adult C. apella monkeys. Labeling of neuronal somata and processes with microtubule-associated proteins (MAP2a-c) and neuron nuclear (NeuN) antibodies, was also observed in subcortical white matter of humans and monkeys. Results suggest competence of subcortical white matter astroglia of the primate brain to participate in various transmitter regulatory pathways. It is also proposed that, collectively with resident neurons, they may exert some role in affecting the transfer of information that takes place through the various associational and projecting fiber systems coursing through this brain compartment.
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Affiliation(s)
- Jorge A Colombo
- Unidad de Neurobiología Aplicada (UNA) (CEMIC), Av. Galván 4102, 1431 Ciudad de, Buenos Aires, Argentina.
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Hogan D, Berman NE. The development of somatostatin immunoreactive neurons in cat visual cortical areas. BRAIN RESEARCH. DEVELOPMENTAL BRAIN RESEARCH 1993; 71:221-38. [PMID: 8098274 DOI: 10.1016/0165-3806(93)90174-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
The development of somatostatin immunoreactive (SOM-ir) neurons in cat striate and extrastriate cortex was studied to determine whether temporal changes in the morphology, distribution and density of SOM-ir neurons during development would provide clues to the emergence of specific cortical areas. The visual cortical areas examined included areas 17-19 and 7, posteromedial lateral suprasylvian, posterolateral lateral suprasylvian cortex and splenial visual area. We observed that the pattern of SOM-ir neurons in the cortical plate reflects the maturation of the cortical plate. At 1 week of age, SOM-ir neurons were only found in layers V and VI of the developing cortex; by 2 weeks of age, SOM-ir neurons were found in layer IV; and by 3 weeks of age, SOM-ir neurons were located in all layers of the cortex except layer I. SOM-ir neurons in the subplate were much more numerous under lateral cortical areas than under medial areas. This difference decreased over the first 2 postnatal weeks and by the 14th day after birth (P14), the distribution and numbers of SOM-ir neurons in the subplate/white matter had reached the adult pattern. The timing of exuberant SOM expression in the subplate suggests a function in the formation of visual corticocortical connections which begin to develop during the first postnatal week in the kitten.
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Affiliation(s)
- D Hogan
- Department of Anatomy and Cell Biology, University of Kansas Medical Center, Kansas City 66160-7400
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Aylward RL, Totterdell S. Neurons in the ventral subiculum, amygdala and entorhinal cortex which project to the nucleus accumbens: their input from somatostatin-immunoreactive boutons. J Chem Neuroanat 1993; 6:31-42. [PMID: 7679909 DOI: 10.1016/0891-0618(93)90005-o] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Neurons in the hippocampus, amygdala and entorhinal cortex which project to the nucleus accumbens were labelled retrogradely following injection of horseradish peroxidase. The injections were targetted on the medial part of the nucleus accumbens, but some injection sites included the whole nucleus. Projection neurons in all three areas were found to be spiny, and from the entorhinal cortex and ventral subiculum of the hippocampus they were pyramidal neurons. Somatostatin (S28(1-12)-immunoreactive neurons were found in all parts of the three limbic areas examined. They were found to have various morphologies, but in the electron microscope all had the ultrastructural characteristics of interneurons. In the hippocampus the stratum lacunosum was found to contain the most immunoreactive fibres while most cells lay in the stratum oriens. In the amygdala the densest staining for both cells and fibres was in the central nucleus. In the entorhinal cortex somatostatin-immunoreactive fibres and cells seemed to have no preferential distribution. Examination of somatostatin-immunoreactive profiles in the electron microscope revealed that the majority of synaptic contacts were made with dendrites, many of which were spine-bearing. In the light microscope somatostatin-immunoreactive fibres could be seen to lie near the somata and proximal dendrites of neurons that projected to the nucleus accumbens. In the electron microscope it was found that somatostatin-immunoreactive boutons were in symmetrical synaptic contact with the somata and proximal dendrites of neurons in the ventral subiculum, entorhinal cortex and amygdala which project to the nucleus accumbens.
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Affiliation(s)
- R L Aylward
- University Department of Pharmacology, Oxford, Great Britain
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