Phytoremediation of polyaromatic hydrocarbons, anilines and phenols

Bio-fabricated bismuth-based materials for removal of emerging environmental contaminants from wastewater

Although rapid industrialization has made life easier for humans, several associated issues are emerging and harming the environment. Wastewater is regarded as one of the key problems of the 21st century due to its massive production every year and requires immediate attention from all stakeholders to protect the environment. Since the introduction of nanotechnology, bismuth-based nanomaterials have been used in variety of applications. Various techniques, such as hydrothermal, solvo-thermal and biosynthesis, have been reported for synthesizing these materials, etc. Among these, biosynthesis is eco-friendly, cost-effective, and less toxic than conventional chemical methods. The prime focuses of this review are to elaborate biosynthesis of bismuth-based nanomaterials via bio-synthetic agents such as plant, bacteria and fungi and their application in wastewater treatment as anti-pathogen/photocatalyst for pollutant degradation. Besides this, future perspectives have been presented for the upcoming research in this field, along with concluding remarks.

Preparation of Breadfruit Leaf Biochar for the Application of Congo Red Dye Removal from Aqueous Solution and Optimization of Factors by RSM-BBD

In this work, biochar produced from breadfruit leaves was utilized to remove the toxic Congo red dye. XRD, FTIR, and FESEM-EDX were implemented to characterize the biochar. Response surface methodology (RSM) and the Box-Behnken design (BBD) techniques were used to evaluate Congo red’s optimum adsorption efficiency. The adsorption of Congo red was studied by varying dye concentrations (5–50 mg/L), times (30–240 min), pH (6–9), and dosages (0.5–2 g/100 mL). X-ray diffractometer results show that the structure of biochar is amorphous. The biochar exhibited unbounded OH, aliphatic CH group, and C=O stretch, as shown by the band peaks at 3340 cm−1, 2924 cm−1, and 1625 cm−1 intensities. RSM-BBD design results showed maximum removal efficiency of 99.96% for Congo red at pH 6.37, dye concentration 45 mg/L, time 105 min, and dosage 1.92 g, respectively. The adsorption of Congo red by biochar was successfully modeled using the Langmuir model and pseudo-second-order model. The biochar produced from breadfruit leaves exhibited a high adsorption capacity of 17.81 mg/g for Congo red adsorption. It suggests that the adsorption is both homogenous monolayer and physicochemical.

Exploring bisphenol S removal mechanism with multi-enzymes extracted from waste sludge and reed sediment

4,4'-Sulfonyl-diphenol (BPS), as a widespread environmental hormone-like micropollutant, is difficult to be degraded in the environment. In this study, the removal of BPS with multi-enzymes extracted from waste sludge and reed sediment was studied at 298 K, 310 K, and 328 K. Results show that BPS could be removed efficiently and was time-temperature dependent, which could involve enzymolysis and bio-flocculation. The mechanism and pathways of the enzymolysis were identified with ultraperformance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS). Polymerization of BPS with enzymolysis further improved the removal by bio-flocculation due to the production of BPS oligomers. Furthermore, the interaction mechanism between BPS and multi-enzyme was explored through a series of spectroscopic experiments. Results show that more loose skeletal structure of the multi-enzymes and more hydrophobic microenvironment of the amino acid residues are responsible for the removal of BPS. This research not only provided a method for refractory micropollutants removal but also a way for the utilization of waste sludge and reed sediment.

Recent allopolyploidy alters Spartina microRNA expression in response to xenobiotic-induced stress

Environmental contamination by xenobiotics represents a major threat for natural ecosystems and public health. In response, xenobiotic detoxification is a fundamental trait of organisms for developmental plasticity and stress tolerance, but the underlying molecular mechanisms remain poorly understood in plants. To decipher this process, we explored the consequences of allopolyploidy on xenobiotic tolerance in the genus Spartina Schreb. Specifically, we focused on microRNAs (miRNAs) owing to their central function in the regulation of gene expression patterns, including responses to stress. Small RNA-Seq was conducted on the parents S. alterniflora and S. maritima, their F1 hybrid S. x townsendii and the allopolyploid S. anglica under phenanthrene-induced stress (phe), a model Polycyclic Aromatic Hydrocarbon (PAH) compound. Differentially expressed miRNAs in response to phe were specifically identified within species. In complement, the respective impacts of hybridization and genome doubling were detected, through changes in miRNA expression patterns between S. x townsendii, S. anglica and the parents. The results support the impact of allopolyploidy in miRNA-guided regulation of plant response to phe. In total, we identified 17 phe-responsive miRNAs in Spartina among up-regulated MIR156 and down-regulated MIR159. We also describe novel phe-responsive miRNAs as putative Spartina-specific gene expression regulators in response to stress. Functional validation using Arabidopsis (L.) Heynh. T-DNA lines inserted in homologous MIR genes was performed, and the divergence of phe-responsive miRNA regulatory networks between Arabidopsis and Spartina was discussed.

Polyaniline/Glauconite Nanocomposite Adsorbent for Congo Red Dye from Textile Wastewater

Glauconite (Gl), a naturally occurring clay material, was utilized as an affordable and ecologically friendly adsorbent to explore its capturing capacity towards Congo red (CR) dye from textile industrial waste effluent. To improve adsorption and removal effectiveness, a modification technique utilizing polyaniline (PAN) was investigated. An X-ray diffractometer (XRD), a scanning electron microscope (SEM), and Fourier transformer infrared (FTI-R) were applied as strong familiar characterization techniques for all used adsorbents. The effects of starting concentration, contact duration, adsorbent dose, pH, and temperature on the adsorption process were also studied. The reusability of the adsorbent was studied over four adsorption cycles. The results show that PAN modification of Gl enhances the effectiveness of CR elimination. The clearance efficiency of raw and modified glauconite at 25 °C and pH 7 was 77% and 91%, respectively. The kinetics and isotherms of Congo red dye adsorption were investigated using batch studies to determine the impacts of various experimental conditions. The maximum adsorption capacity of the glauconite/polyaniline (Gl/PAN) nanocomposite rose from 11.9 mg/g for Gl to 14.1 mg/g in accordance with the isotherm analysis, which shows that the Langmuir isotherm properly characterizes the experimental data. The pseudo-second-order model (R2 = 0.998) properly expresses the experimental data. The reusability research proved that the adsorbents may be reused effectively. The overall results suggest that the modified Gl by PAN might be used as a low-cost, natural adsorbent for eliminating CR color from textile effluent.

The Influence of Crops on the Content of Polycyclic Aromatic Hydrocarbons in Soil Fertilized with Manure and Mineral Fertilizers

Polycyclic aromatic hydrocarbons (PAHs) are mainly accumulated in soil. Plants secrete enzymes that transform or biodegrade PAHs in soil. Some plant species are more effective in stimulating the biodegradation of these pollutants than other species. This study was undertaken to evaluate the influence of crop rotation on PAH concentrations in soil. Four crops were grown in rotation: sugar beets, spring barley, maize, and spring wheat. Soil samples for the study were obtained from a long-term field experiment established in 1986 in Bałcyny, Poland. The concentrations of PAHs were analyzed in soil samples gathered over a period of 12 years (1998-2009). An attempt was made to evaluate the effect of crop rotation (sugar beets, spring barley, maize, and spring wheat) on PAH concentrations in soil. The content of PAHs in soil samples was measured by gas chromatography with flame ionization detection. Data were processed statistically by repeated measures ANOVA. The concentrations of ∑16 PAHs were lowest in soil after sugar beet cultivation, and highest in soil after maize cultivation. It can be concluded that maize was the plant with the greatest adverse effect on the content of heavy PAH in the soil, a completely different effect can be attributed to spring wheat, which has always been shown to reduce the content of heavy PAH in the soil. Weather conditions affected PAHs levels in soil, and PAH content was highest in soil samples collected in a year with the driest growing season. This arrangement suggests a greater influence of weather conditions than of the cultivated plant.

Mechanistic insights into phenanthrene acropetal translocation via wheat xylem: Separation and identification of transfer proteins

Polycyclic aromatic hydrocarbons (PAHs) have the potential to cause cancer, teratogenicity, and mutagenesis in humans. Long-term plant safe production relies on how PAHs are transported and coordinated across organs. However, the acropetal transfer mechanism of PAHs in staple crop stems, particularly in xylem, a critical path, is unknown. Herein, we first confirmed the presence of specific interaction between the proteins and phenanthrene by employing the magnetic phenanthrene-bound bead immunoassay and label free liquid chromatograph mass spectrometer (LC-MS/MS), suggesting that peroxidase (uniprot accession: A0A3B5XXD0) and unidentified proteins (uniprot accession: A0A3B6LUC6) may function as the carriers to load and acropetally translocate phenanthrene (a model PAH) in wheat xylem. This specified binding of protein-phenanthrene may form through hydrophobic interactions in the conservative binding region, as revealed by protein structural investigations and molecular docking. To further investigate the role of these proteins in phenanthrene solubilization, phenanthrene exposure was conducted: a substantial quantity of peroxidase was produced; an unusually high expression of uncharacterized proteins was observed, indicating their positive effects in the acropetal transfer of phenanthrene in wheat xylem. These data confirmed that the two proteins are crucial in the solubilization of phenanthrene in wheat xylem sap. Our findings provide fresh light on the molecular mechanism of PAH loading in plant xylem and techniques for ensuring the security of staple crops and improving the efficacy of phytoremediation in a PAH-contaminated environment.

Assessment for combined phytoremediation and biomass production on a moderately contaminated soil

Once previous industrial activity has ceased, brownfields are found in urban and suburban environments and managed in different ways ranging from being left untouched to total reconversion. These situations apply to large surface areas often impacted by residual diffuse pollution. Though significant and preventing any sensitive use, residual contamination does not necessarily require treatment. Moreover, conventional treatments show their technical and economic limits in these situations and gentle remediation options such as phytomanagement might appear more relevant to the management of those sites. Thus, these sites face up two major issues: managing moderate contamination levels and providing an alternative use of economic interest. This work proposes to assess a management strategy associating the phytoremediation of organic pollution along with the production of biomass for energy generation production. A 16-week controlled growth experiment was conducted on a soil substrate moderately impacted by multiple pollution (trace elements, mainly Zn and Pb, and hydrocarbons), by associating rhizodegradation with Medicago sativa or biomass production with Robinia pseudoacacia or Alnus incana in monocultures. The effect of a microbial inoculum amendment on the performances of these treatments was also evaluated. Results showed total hydrocarbons (TH), and to a lesser extent polycyclic aromatic hydrocarbons (PAH), concentrations decreased over time, whatever the plant cover. Good biomass production yields were achieved for both tree species in comparison with the control sample, even though R. pseudoacacia seemed to perform better. Furthermore, the quality of the biomass produced was in conformity with the thresholds set by the legislation concerning its use as a renewable energy source.

Phytoremediation of a pyrene-contaminated soil by Cannabis sativa L. at different initial pyrene concentrations

This study proposes the phytoremediation of a pyrene (PYR)-contaminated soil by Cannabis sativa L. The experimental campaign was conducted along a 60 days period using three different initial PYR concentrations (i.e., 50, 100 and 150 mg kg TS^-1 of soil) in 300 mL volume pots under greenhouse conditions (18-25 °C and 45-55% humidity). After 60 days of hemp growth and flourishing, the highest PYR removal reached approximately 95% in planted soil, 35% higher than in the unplanted control. PYR accumulation was observed in both roots and aerial parts of the plant, with a higher PYR uptake at increasing initial PYR concentrations in soil. The initial PYR concentration affected the growth and, thus, the phytoremediation potential of C. sativa L., which was the result of different removal mechanisms. Overall, the lowest initial PYR concentration was the one that resulted in the highest PYR removal. The interaction between the plant roots and microorganisms in rhizosphere was likely associated with PYR removal in this study. The highest DHO activity of 66.26 μg INTF g^-1 TS^-1 was observed in the soil spiked with 50 mg PYR·kg TS^-1.

Effects of arbuscular mycorrhizal fungi on frond antimony enrichment, morphology, and proteomics in Pteris cretica var. nervosa during antimony phytoremediation

Pteris cretica var. nervosa is a dominant fern species found in antimony (Sb) mining areas, capable of forming symbiosis with arbuscular mycorrhizal fungi (AMF), especially with those members of the Glomus genus. Despite this fern's relevance and the potential contribution of mycorrhizal symbiosis to phytoremediation, the AMF's impact on P. var. nervosa phytoremediation of Sb remains unknown. Here, we exposed P. var. nervosa to different concentrations of Sb for 6 months. Our results showed that Sb reduced shoot biomass, enlarged the root/shoot ratio, and disrupted the fronds' intracellular structure. AMF inoculation, however, was able to moderate these phenotypic changes and increased the accumulation level of Sb in plants. From a proteomics analysis of this plant's fronds, a total of 283 proteins were identified. Notably, those proteins with catalytic function, carbon fixing and ATP metabolic function were highly enriched. K-means clustering demonstrated protein-changing patterns involved in multiple metabolic pathways during exposure to Sb. Further, these patterns can be moderated by AMF inoculation. Pearson correlations were used to assess the plant biomarkers-soil Sb relationships; This revealed a strong correlation between ribosome alteration and the root/shoot ratio when inoculated with AMF, and a positive correlation between photosynthesis proteins and chlorophyll (SPAD value). Our results indicate AMF could moderate the fronds impairment by maintaining the sufficient protein levels for ribosomal functioning, photosynthesis activity and to counter ROS production. We demonstrate the effective use of AMF associated with P. cretica var. nervosa for Sb phytoremediation and the potential of applying proteomics to better understand the mechanism behind this symbiotic plant physiological response.

The effect of interactions between soil compaction and phenol contamination on plant growth characteristics: Implications for scaling bioremediation at industrial sites

In phenol contaminated soils from an industrial site, soil compaction and soil chemical contaminants influenced germination, emergence, and early plant growth (roots and shoots) for Thrift (Ameria maratima) and Blackbutt oats (Avena sativa). The specific effects were of soil compaction (low, 100 psi and high, 800 psi) at two concentrations of phenol (biotreated, ∼200 mg kg^-3; untreated, ∼1150 mg kg^-3). Plant responses to compaction and phenol varies between the two species. Emergence of Thrift showed greater sensitivity to increasing soil compaction but only under high phenol concentrations. Low phenol inhibited Thrift root length, as is the case with Balckbutt oats, although high phenol had no significant impact on Thrift. While shoot length of Blackbutt oats is not significantly affected by increasing soil compaction, it is negatively impacted at the increased phenol concentrations in the untreated soils indicating an interaction effect with compaction. This is the first study that examines the impact of soil contamination on oats. The oat variety tested had known drought tolerance and hardiness indicating an ability to withstand compaction, and which may explain those characteristics. Thrift was most resistant to contamination which is consistent with its previously reported tolerance of pollutants. Implications of the study are that Blackbutt oats represent a potential candidate species for land rehabilitation under high compaction conditions such as at degraded soil sites at decommissioned mining operations, polluted industrial sites, or degraded (compacted) agricultural land.

Detoxification of phenanthrene in Arabidopsis thaliana involves a Dioxygenase For Auxin Oxidation 1 (AtDAO1)

Polycyclic aromatic hydrocarbon (PAH) contamination has a negative impact on ecosystems. PAHs are a large group of toxins with two or more benzene rings that are persistent in the environment. Some PAHs can be cytotoxic, teratogenic, and/or carcinogenic. In the bacterium Pseudomonas, PAHs can be modified by dioxygenases, which increase the reactivity of PAHs. We hypothesize that some plant dioxygenases are capable of PAH biodegradation. Herein, we investigate the involvement of Arabidopsis thaliana At1g14130 in the degradation of phenanthrene, our model PAH. The At1g14130 gene encodes Dioxygenase For Auxin Oxidation 1 (AtDAO1), an enzyme involved in the oxidative inactivation of the hormone auxin. Expression analysis using a β-glucuronidase (GUS) reporter revealed that At1g14130 is prominently expressed in new leaves of plants exposed to media with phenanthrene. Analysis of the oxidative state of gain-of-function mutants showed elevated levels of H₂O₂ after phenanthrene treatments, probably due to an increase in the oxidation of phenanthrene by AtDAO1. Biochemical assays with purified AtDAO1 and phenanthrene suggest an enzymatic activity towards the PAH. Thus, data presented in this study support the hypothesis that an auxin dioxygenase, AtDAO1, from Arabidopsis thaliana contributes to the degradation of phenanthrene and that there is possible toxic metabolite accumulation after PAH exposure.

Methylome and transcriptome analyses of soybean response to bean pyralid larvae

BACKGROUND

Bean pyralid is one of the major leaf-feeding insects that affect soybean crops. DNA methylation can control the networks of gene expressions, and it plays an important role in responses to biotic stress. However, at present the genome-wide DNA methylation profile of the soybean resistance to bean pyralid has not been reported so far.

RESULTS

Using whole-genome bisulfite sequencing (WGBS) and RNA-sequencing (RNA-seq), we analyzed the highly resistant material (Gantai-2-2, HRK) and highly susceptible material (Wan82-178, HSK), under bean pyralid larvae feeding 0 h and 48 h, to clarify the molecular mechanism of the soybean resistance and explore its insect-resistant genes. We identified 2194, 6872, 39,704 and 40,018 differentially methylated regions (DMRs), as well as 497, 1594, 9596 and 9554 differentially methylated genes (DMGs) in the HRK0/HRK48, HSK0/HSK48, HSK0/HRK0 and HSK48/HRK48 comparisons, respectively. Through the analysis of global methylation and transcription, 265 differentially expressed genes (DEGs) were negatively correlated with DMGs, there were 34, 49, 141 and 116 negatively correlated genes in the HRK0/HRK48, HSK0/HSK48, HSK0/HRK0 and HSK48/HRK48, respectively. The MapMan cluster analysis showed that 114 negatively correlated genes were clustered in 24 pathways, such as protein biosynthesis and modification; primary metabolism; secondary metabolism; cell cycle, cell structure and component; RNA biosynthesis and processing, and so on. Moreover, CRK40; CRK62; STK; MAPK9; L-type lectin-domain containing receptor kinase VIII.2; CesA; CSI1; fimbrin-1; KIN-14B; KIN-14 N; KIN-4A; cytochrome P450 81E8; BEE1; ERF; bHLH25; bHLH79; GATA26, were likely regulatory genes involved in the soybean responses to bean pyralid larvae. Finally, 5 DMRs were further validated that the genome-wide DNA data were reliable through PS-PCR and 5 DEGs were confirmed the relationship between DNA methylation and gene expression by qRT-PCR. The results showed an excellent agreement with deep sequencing.

CONCLUSIONS

Genome-wide DNA methylation profile of soybean response to bean pyralid was obtained for the first time. Several specific DMGs which participated in protein kinase, cell and organelle, flavonoid biosynthesis and transcription factor were further identified to be likely associated with soybean response to bean pyralid. Our data will provide better understanding of DNA methylation alteration and their potential role in soybean insect resistance.

Biochemical and Metabolic Plant Responses toward Polycyclic Aromatic Hydrocarbons and Heavy Metals Present in Atmospheric Pollution

Heavy metals (HMs) and polycyclic aromatic hydrocarbons (PAHs) are toxic components of atmospheric particles. These pollutants induce a wide variety of responses in plants, leading to tolerance or toxicity. Their effects on plants depend on many different environmental conditions, not only the type and concentration of contaminant, temperature or soil pH, but also on the physiological or genetic status of the plant. The main detoxification process in plants is the accumulation of the contaminant in vacuoles or cell walls. PAHs are normally transformed by enzymatic plant machinery prior to conjugation and immobilization; heavy metals are frequently chelated by some molecules, with glutathione, phytochelatins and metallothioneins being the main players in heavy metal detoxification. Besides these detoxification mechanisms, the presence of contaminants leads to the production of the reactive oxygen species (ROS) and the dynamic of ROS production and detoxification renders different outcomes in different scenarios, from cellular death to the induction of stress resistances. ROS responses have been extensively studied; the complexity of the ROS response and the subsequent cascade of effects on phytohormones and metabolic changes, which depend on local concentrations in different organelles and on the lifetime of each ROS species, allow the plant to modulate its responses to different environmental clues. Basic knowledge of plant responses toward pollutants is key to improving phytoremediation technologies.

In situ nanoremediation of soils and groundwaters from the nanoparticle's standpoint: A review

Anthropogenic pollution coming from industrial processes, agricultural practices and consumer products, results in the release of toxic substances into rural and urban environments. Once released, these chemicals migrate through the atmosphere and water, and find their way into matrices such as sediments and groundwaters, thus making large areas potentially uninhabitable. Common pollutants, including heavy metal(loid)s, radionuclides, aliphatic hydrocarbons and halogenated organics, are known to adversely affect physiological systems in animal species. Pollution can be cleaned up using techniques such as coagulation, reverse osmosis, oxidation and biological methods, among others. The use of nanoparticles (NPs) extends the range of available technologies and offers particular benefits, not only by degrading, transforming and immobilizing contaminants, but also by reaching inaccessible areas and promoting biotic degradation. The development of NPs is understandably heralded as an environmentally beneficial technology; however, it is only now that the ecological risks associated with their use are being evaluated. This review presents recent developments in the use of engineered NPs for the in situ remediation of two paramount environmental matrices: soils and groundwaters. Emphasis will be placed on (i) the successful applications of nano-objects for environmental cleanup, (ii) the potential safety implications caused by the challenging requirements of [high reactivity toward pollutants] vs. [none reactivity toward biota], with a thorough view on their transport and evolution in the matrix, and (iii) the perspectives on scientific and regulatory challenges. To this end, the most promising nanomaterials will be considered, including nanoscale zerovalent iron, nano-oxides and carbonaceous materials. The purpose of the present review is to give an overview of the development of nanoremediators since they appeared in the 2000s, from their chemical modifications, mechanism of action and environmental behavior to an understanding of the problematics (technical limitations, economic constraints and institutional precautionary approaches) that will drive their future full-scale applications.

Smarter cures to combat COVID-19 and future pathogens: a review

Prevention is better than cure. A milestone of the anthropocene is the emergence of a series of epidemics and pandemics often characterized by the transmission of a pathogen from animals to human in the past two decades. In particular, the coronavirus disease 2019 (COVID-19) has made a profound impact on emergency responding and policy-making in a public health crisis. Classical solutions for controlling the virus, such as travel restrictions, lockdowns, repurposed drugs and vaccines, are socially unpopular and medically limited by the fast mutation and adaptation of the virus. This is exacerbated by microbial resistance to therapeutic drugs and the slowness of vaccine development. In other words, microbial pathogens are somehow 'smarter' and faster than us, thus calling for more intelligent cures to combat future pandemics. Here, we compare therapeutics for COVID-19 such as synthetic drugs, vaccines, antibodies and phages. We present the strength and limitations of antibiotic and antiviral drugs, vaccines, and antibody-based therapeutics. We describe smarter, cheaper and preventive cures such as bacteriophages, food medicine using probiotics and prebiotics, sports, healthy diet, music, yoga, Tai Chi, dance, reading, knitting, cooking and outdoor activities. Some of these preventive cures have been intuitively developed since thousands of years ago, as illustrated by the fascinating similarity of the Chinese characters for 'music' and 'herbal medicine.'

Plant apocarotenoid metabolism utilizes defense mechanisms against reactive carbonyl species and xenobiotics

Carotenoid levels in plant tissues depend on the relative rates of synthesis and degradation of the molecules in the pathway. While plant carotenoid biosynthesis has been extensively characterized, research on carotenoid degradation and catabolism into apocarotenoids is a relatively novel field. To identify apocarotenoid metabolic processes, we characterized the transcriptome of transgenic Arabidopsis (Arabidopsis thaliana) roots accumulating high levels of β-carotene and, consequently, β-apocarotenoids. Transcriptome analysis revealed feedback regulation on carotenogenic gene transcripts suitable for reducing β-carotene levels, suggesting involvement of specific apocarotenoid signaling molecules originating directly from β-carotene degradation or after secondary enzymatic derivatizations. Enzymes implicated in apocarotenoid modification reactions overlapped with detoxification enzymes of xenobiotics and reactive carbonyl species (RCS), while metabolite analysis excluded lipid stress response, a potential secondary effect of carotenoid accumulation. In agreement with structural similarities between RCS and β-apocarotenoids, RCS detoxification enzymes also converted apocarotenoids derived from β-carotene and from xanthophylls into apocarotenols and apocarotenoic acids in vitro. Moreover, glycosylation and glutathionylation-related processes and translocators were induced. In view of similarities to mechanisms found in crocin biosynthesis and cellular deposition in saffron (Crocus sativus), our data suggest apocarotenoid metabolization, derivatization and compartmentalization as key processes in (apo)carotenoid metabolism in plants.

Microbial Degradation of Naphthalene and Substituted Naphthalenes: Metabolic Diversity and Genomic Insight for Bioremediation

Low molecular weight polycyclic aromatic hydrocarbons (PAHs) like naphthalene and substituted naphthalenes (methylnaphthalene, naphthoic acids, 1-naphthyl N-methylcarbamate, etc.) are used in various industries and exhibit genotoxic, mutagenic, and/or carcinogenic effects on living organisms. These synthetic organic compounds (SOCs) or xenobiotics are considered as priority pollutants that pose a critical environmental and public health concern worldwide. The extent of anthropogenic activities like emissions from coal gasification, petroleum refining, motor vehicle exhaust, and agricultural applications determine the concentration, fate, and transport of these ubiquitous and recalcitrant compounds. Besides physicochemical methods for cleanup/removal, a green and eco-friendly technology like bioremediation, using microbes with the ability to degrade SOCs completely or convert to non-toxic by-products, has been a safe, cost-effective, and promising alternative. Various bacterial species from soil flora belonging to Proteobacteria (Pseudomonas, Pseudoxanthomonas, Comamonas, Burkholderia, and Novosphingobium), Firmicutes (Bacillus and Paenibacillus), and Actinobacteria (Rhodococcus and Arthrobacter) displayed the ability to degrade various SOCs. Metabolic studies, genomic and metagenomics analyses have aided our understanding of the catabolic complexity and diversity present in these simple life forms which can be further applied for efficient biodegradation. The prolonged persistence of PAHs has led to the evolution of new degradative phenotypes through horizontal gene transfer using genetic elements like plasmids, transposons, phages, genomic islands, and integrative conjugative elements. Systems biology and genetic engineering of either specific isolates or mock community (consortia) might achieve complete, rapid, and efficient bioremediation of these PAHs through synergistic actions. In this review, we highlight various metabolic routes and diversity, genetic makeup and diversity, and cellular responses/adaptations by naphthalene and substituted naphthalene-degrading bacteria. This will provide insights into the ecological aspects of field application and strain optimization for efficient bioremediation.

Macrophyte Potential to Treat Leachate Contaminated with Wood Preservatives: Plant Tolerance and Bioaccumulation Capacity

Pentachlorophenol and chromated copper arsenate (CCA) have been used worldwide as wood preservatives, but these compounds can toxify ecosystems when they leach into the soil and water. This study aimed to evaluate the capacity of four treatment wetland macrophytes, Phalaris arundinacea, Typha angustifolia, and two subspecies of Phragmites australis, to tolerate and treat leachates containing wood preservatives. The experiment was conducted using 96 plant pots in 12 tanks filled with three leachate concentrations compared to uncontaminated water. Biomass production and bioaccumulation were measured after 35 and 70 days of exposure. There were no significant effects of leachate contamination concentration on plant biomass for any species. No contaminants were detected in aboveground parts of the macrophytes, precluding their use for phytoextraction within the tested contamination levels. However, all species accumulated As and chlorinated phenols in belowground parts, and this accumulation was more prevalent under a more concentrated leachate. Up to 0.5 mg pentachlorophenol/kg (from 81 µg/L in the leachate) and 50 mg As/kg (from 330 µg/L in the leachate) were accumulated in the belowground biomass. Given their high productivity and tolerance to the contaminants, the tested macrophytes showed phytostabilization potential and could enhance the degradation of phenols from leachates contaminated with wood preservatives in treatment wetlands.

Effect of the type of soil on dimethyl phthalate degradation by ozone

In the present study, ozone was applied for the removal of dimethyl phthalate (DMP) from soil. The effect of several experimental parameters was investigated considering, the initial DMP concentration, ozone flow, the type of soil (sand and agricultural soil) and the presence of α-FeOOH as a potential catalyst in the reaction system with sand. The elimination of DMP using ozone is significantly affected by the type of soil. In the case of sand, conventional ozonation was capable to degrade 74% of the initial DMP concentration (0.5 mg g^-1) after 8 h of the reaction, however, the mineralization degree was below 50%. Under the same experimental conditions, the complete elimination of DMP was achieved when calcined agricultural soil was present reaching a 70% of mineralization. The presence of metal oxides in calcined agricultural soil combined with ozone produced oxidants species which were responsible of incrementing the mineralization degree (around 20% in comparison with the sand). The toxicity tests on lettuce seed demonstrated lower toxicity of DMP byproducts after ozonation. The DMP high removal efficiencies and the lower toxicity of generated byproducts in soil prove the applicability of ozone treatment for soil remediation.

Kinetics and statistical analysis of the bio-stimulating effects of goat litter in crude oil biodegradation process

Background

The kinetics and statistical analysis of crude oil (CO) degradation in CO-contaminated soil (COCS) using goat litter (GL) were investigated. The data obtained from the CO degradation process was fitted to the first- and second-order kinetic models. The effects of process parameters such as temperature and the initial CO concentrations on the CO degradation process were also investigated. The one-way ANOVA and Turkey’s post-hoc analysis were also used to study the statistical significance of the process parameters on the CO degradation process.

Results

The microbial count showed that the GL contained a total viable count (TVC), coliform, and mold counts of 2.6 × 107 CFUg−1, 2.6 × 107 CFUg−1, and 6.9 × 103 CFUg-1, respectively. The error and linear regression analysis between experimental and model-predicted values revealed that the first-order kinetic model gave a better explanation of the CO degradation process. The rejection of the null hypothesis was evident from one-way ANOVA and Turkey’s post-hoc analysis as the P values at a temperature of 30 °C and initial CO concentrations of 70 gL−1 and 90 gL−1 were less than the significant level of 0.05. Notable organic nutrients in the GL which were beneficial in the COCS treatment process as indicated by the Fourier-transform infrared spectrophotometer (FTIR) analysis were phosphorous and nitrogen.

Conclusions

It may be concluded that GL could be used as an effective organic treatment for COCS at CO initial concentrations of 70 and 90 gL-1 and a temperature of 30 °C.

Fire Phoenix facilitates phytoremediation of PAH-Cd co-contaminated soil through promotion of beneficial rhizosphere bacterial communities

Pot experiments were conducted in a growth chamber to evaluate the phytoremediation efficiency and rhizosphere regulation mechanism of Fire Phoenix (a mixture of Festuca L.) in polycyclic aromatic hydrocarbon-cadmium (PAH-Cd) co-contaminated soils. Plant biomass, removal rates of PAHs and Cd, soil enzyme activity, and soil bacterial community were determined. After 150 days of planting, the removal rates of the total 4 PAHs and Cd reached 64.57% and 40.93% in co-contaminated soils with low-PAH (104.79-144.87 mg·kg^-1), and 68.29% and 25.40% in co-contaminated soils with high-PAH (169.17-197.44 mg·kg^-1), respectively. The polyphenol oxidase (PPO) activity decreased in soils having Fire Phoenix, while the dehydrogenase (DHO) activity increased as the changes of DHO activity had a strong positive correlation with the removal rates of PAHs and Cd in the low-PAH soils (r = 0.862 (P < 0.006) and 0.913 (P < 0.002), respectively). Meanwhile, successional changes in the bacterial communities were detected using high-throughput 454 Gs-FLX pyrosequencing of the 16S rRNA, and these changes were especially apparent for the co-contaminated soils with the low PAH concentration. The Fire Phoenix could promote the growth of Mycobacterium, Dokdonella, Gordonia and Kaistobacter, which played important roles in PAHs degradation or Cd dissipation. These results indicated that Fire Phoenix could effectively motivate the soil enzyme and bacterial community and enhance the potential for phytoremediation of PAH-Cd co-contaminated soils.

Petroleum hydrocarbons degradation in contaminated soil using the plants of the Aster family

Oil extraction is one of the causes of soil contamination with the total petroleum hydrocarbons. The objective of this study was to clarify the effect of Asteraceae plants on the degradation of petroleum hydrocarbon in contaminated soil. Initial soils with 40 and 90 g kg^-1 of total petroleum hydrocarbon (TPH) were prepared. There were three treatments: (1) no addition, (2) addition of FeCl₃ and nitrilotriacetic acid (NTA) solution, and (3) addition of FeCl₃ + NTA and the cultivation of nine Asteraceae plants. The concentration of TPH was measured using infrared spectrophotometer, 2 and 3 months after transplanting (MAT). Shoot and root dry weights were measured 3 MAT. The concentration of TPH in soil cultivated with Cosmos caudatus was lower than that of the initial soil (40 g kg^-1 TPH), 2 MAT. The concentrations of TPH in soils cultivated with Calendula officinalis, Callistephus chinensis, C. caudatus, and Tagetes sp. were also lower than that in the initial soil, 3 MAT. The concentrations of TPH in soils cultivated with Achillea filipendulina, Anthemis tinctoria, Tagetes erecta, Chrysanthemum coronarium, C. officinalis, C. chinensis, and C. caudatus were lower than that in the initial soil (90 g kg^-1 TPH), 2 MAT. The concentrations of TPH in soils cultivated with T. erecta, A. tinctoria, Zinnia elegans, C. chinensis, C. caudatus, and Tagetes sp. were lower than that in the initial soil, 3 MAT. A. filipendulina and C. coronarium died at both 40 and 90 kg^-1 TPH soils. These results suggest that the roots of Asteraceae plants degrade petroleum hydrocarbon in contaminated soil and C. chinensis and Z. elegans are more suitable for using TPH remediation. Plant survival and extensive root system are important factors for the remediation of TPH in contaminated soil.

Bioaugmentation coupled with phytoremediation for the removal of phenolic compounds and color from treated palm oil mill effluent

The potential for coupling bioaugmentation with phytoremediation to simultaneously treat and utilize treated palm oil mill effluent (TPOME) in animal feed production was determined from a reduction in phenolic compounds and color in soil leachates, as well as from an increased yield of pasture grass. Two phenol-degrading bacteria-Methylobacterium sp. NP3 and Acinetobacter sp. PK1-were inoculated into the Brachiaria humidicola rhizosphere before the application of TPOME. A pot study showed that the soil with both grass and inoculated bacteria had the highest dephenolization and decolorization efficiencies, with a maximum capability of removing 70% from 587 mg total phenolic compounds added and 73% from 4438 color units during ten TPOME application cycles. The results corresponded to increases in the number of phenol-degrading bacteria and the grass yield. In a field study, this treatment was able to remove 46% from 21,453 mg total phenolic compounds added, with a maximum color removal efficiency of 52% from 5105 color units, while the uninoculated plots removed about 24-39% and 29-46% of phenolic compounds and color, respectively. The lower treatment performance was probably due to the increased TPOME concentrations. Based on the amounts of phenolic compounds, protein, and crude fiber in the grass biomass, the inoculated TPOME-treated grass had a satisfactory nutritional quality and digestibility for use as animal feed.

Increased tolerance to organic xenobiotics following recent allopolyploidy in Spartina (Poaceae)

Genome doubling or polyploidy is a widespread phenomenon in plants where it has important evolutionary consequences affecting the species distribution and ecology. PAHs are ubiquitous organic pollutants, which represent a major environmental concern. Recent data showed that tolerance to organic xenobiotics involve specific signaling pathways, and detoxifying gene sets referred as 'the xenome'. However, no data are available about how polyploidy impacts tolerance to organic xenobiotics. In the present paper, we investigated PAH tolerance following allopolyploidization in Spartina alterniflora, S. maritima and their derived allopolyploid species S. anglica. We performed comparative analyses of cellular compartmentalization, photosynthetic indices, and oxidative stress markers under phenanthrene-induced stress, and found that S. anglica exhibit increased tolerance compared to its parents. Based on 52 genes potentially involved in phenanthrene detoxification previously identified in A. thaliana, we investigated the Spartina xenome using genomic and transcriptomic available resources. Subsequently, we focused on GSTs, a ubiquitous enzymes class involved in organic xenobiotic detoxification. We examined expression profiles of selected genes by RT-qPCR, and revealed various patterns of parental expression alteration in the allopolyploid. The impacts of allopolyploidization on phenanthrene-induced stress and their potential ecological implications are discussed. The neo-allopolyploid S. anglica appears as a potential candidate for phytoremediation in PAH-polluted marshes.

Analysis of a Hybrid Suspended-Supported Photocatalytic Reactor for the Treatment of Wastewater Containing Benzothiazole and Aniline

In this work, a study of the main operating variables affecting TiO2/UV photocatalysis was carried out. The treatment of an industrial effluent containing aniline and benzothiazole from the manufacture of accelerants for vulcanization was performed in a TiO2-supported commercial photoreactor. The degradation of both contaminants was monitored by GC-MS analysis. The proposed experiments were able to properly identify the phenomenon of adsorption, as well as to improve the performance of the commercial photoreactor by adding small amounts of TiO2 in suspension. The removal performance, durability of the photocatalytic material, and energy costs were analysed. The results showed that the use of suspensions intensifies the degradation obtaining an improvement of 23.15% with respect to the use of the supported catalyst. For an aniline and benzothiazole solution, the best operating conditions were found at pH = 12.0, introducing 60.0 mg L−1 of suspended TiO2 together with the existing supported catalyst.

Comprehensive RNA sequencing and co-expression network analysis to complete the biosynthetic pathway of coumestrol, a phytoestrogen

Coumestrol (CMS), a coumestan isoflavone, plays key roles in nodulation through communication with rhizobia, and has been used as phytoestrogens for hormone replacement therapy in humans. Because CMS content is controlled by multiple genetic factors, the genetic basis of CMS biosynthesis has remained unclear. We identified soybean genotypes with consistently high (Daewonkong) or low (SS0903-2B-21-1-2) CMS content over 2 years. We performed RNA sequencing of leaf samples from both genotypes at developmental stage R7, when CMS levels are highest. Within the phenylpropanoid biosynthetic pathway, 41 genes were tightly connected in a functional co-expression gene network; seven of these genes were differentially expressed between two genotypes. We identified 14 candidate genes involved in CMS biosynthesis. Among them, seven were annotated as encoding oxidoreductases that may catalyze the transfer of electrons from daidzein, a precursor of CMS. Two of the other genes, annotated as encoding a MYB domain protein and a MLP-like protein, may increase CMS accumulation in response to stress conditions. Our results will help to complete our understanding of the CMS biosynthetic pathway, and should facilitate development of soybean cultivars with high CMS content that could be used to promote the fitness of plants and human beings.

Exploring the response of Marchantia polymorpha: Growth, morphology and chlorophyll content in the presence of anthracene

Polycyclic aromatic hydrocarbons (PAHs) were identified as hazardous contaminants that are ubiquitous and persistent in aquatic environments, where bryophytes sensu lato (mosses, liverworts and hornworts) are frequently present. Marchantia polymorpha (Class Hepaticae; thalloid liverwort) is known to respond fast to changes in the environment; it accumulates toxic substances in its tissues due to the lack of vascular and radicular systems and a reduced or absent cuticle. The objective of the present study was to quantify the effects of increasing concentrations of anthracene (0, 50 100, 280 μM) on the germination of propagules, plant morphology and chlorophyll content index (CCI) in M. polymorpha under in vitro cultures. The results show that anthracene had no statistical effect on germination or propagula formation. However, plants exposed to anthracene for 30 days showed significantly lowered the content of chlorophyll (measured as CCI), irregular growth patterns and the induction of thalli asexual reproduction as evidenced by the production of multicellular viable propagules in gemmae cups. Results of epifluorescence microscopy also showed concomitant accumulation of anthracene in the cell walls. All of these distinctive morphological and physiological adaptive responses indicators, clearly suggest that M. polymorpha are capable of resisting high (coal tar) anthracene concentrations.

Glomalin-related soil protein influences the accumulation of polycyclic aromatic hydrocarbons by plant roots

Studies have demonstrated that the inoculation of soil with arbuscular mycorrhizal fungi (AMF) enhances the content of glomalin-related soil protein (GRSP), which in turn elevates the availability of polycyclic aromatic hydrocarbons (PAHs) in soil. However, few studies have examined the influence of GRSP on PAH accumulation by plants and their tissues. Understanding of this issue would provide new perspectives on the role of GRSP in PAH uptake by plants at contaminated sites. This investigation was the first observational study of the GRSP-influenced PAH accumulation in roots of ryegrass (Lolium multiflorum Lam.). GRSP (0-120 mg/L) enhanced the root PAH accumulation in a GRSP-concentration-dependent manner, based on the observed root concentrations and root concentration factors (RCFs). The greatest enhancement of ΣPAH accumulation appeared at 40 mg/L of the total GRSP (T-GRSP) and 80 mg/L of the easily extracted GRSP (EE-GRSP), respectively. The weakly and strongly adsorbed fractions accounted for 88.8-94.4%, while the absorbed fraction contributed no >11.2% of total PAH accumulation in roots. The capacity of PAH adsorption on roots was enlarged in the presence of GRSP (0-120 mg/L). As the adsorbed fraction dominated the total PAH contents in roots overwhelmingly, the GRSP-induced changes in root PAH accumulation were ascribed to GRSP-affected PAH sorption by roots.

Effects of light, microorganisms, farming chemicals and water content on the degradation of microcystin-LR in agricultural soils

An experiment was conducted to investigate the effect of farming activities on microcystin-LR (MC-LR) degradation in soils. Three farming activities were assessed: 1) fertilization via addition of different nitrogen sources and organic matter; 2) pesticide application by addition of different commercial pesticides; and 3) irrigation by addition of different amount of water. The contribution of the two major degradation processes of MC-LR in soils, photodegradation and biodegradation, were also evaluated. MC-LR was added into the soil samples to create a concentration of 500 μg kg^-1 for each treatment. Results showed that natural degradation of MC-LR in soils was mainly by biodegradation rather than photodegradation. MC-degradation was stimulated by the addition of NaNO₃ and humic acid, whereas degradation was inhibited by addition of NH₄Cl, glucose, and glycine. Application of high concentrations of glyphosate and chlorothalonil significantly inhibited the degradation of MC-LR in soils and the half-life was almost twice as long as the control. No significant effect was found by addition of CO(NH₂)₂ and dimethoate. Both low (10%) and high water content (60%) could lead to inhibition of MC-LR degradation. Results from our study help to inform farm practices that could alleviate contamination by MC-LR in agroecosystems.

Phytoremediation of polycyclic aromatic hydrocarbons (PAH) by cv. Crioula: A Brazilian alfalfa cultivar

This work aimed to evaluate the phytoremediation capacity of the alfalfa cultivar Crioula in soils contaminated with polycyclic aromatic hydrocarbons (PAHs), primary pollutants with mutagenic and carcinogenic potential. Alfalfa was grown from seed for 40 days on soil amended with anthracene, pyrene, and phenanthrene. Soil and plant tissue was collected for biometric assay, dry mass analysis, and PAH analysis by liquid chromatography. Increased total PAH concentration was associated with decreases in plant biomass, height, and internode length. The Crioula cultivar had a satisfactory phytoremediation effect, reducing total PAH concentration (300 ppm) in the experimental soil by 85% in 20 days, and by more than 95% in 40 days. The PAH showed a tendency to be removed in the temporal order: phenanthrene before pyrene before anthracene, and the removal ratio was influenced by the initial soil concentration of each PAH.

Effect of microcystins on root growth, oxidative response, and exudation of rice (Oryza sativa)

A 30 days indoor hydroponic experiment was carried out to evaluate the effect of microcystins (MCs) on rice root morphology and exudation, as well as bioaccumulation of MCs in rice. MCs were bioaccumulated in rice with the greatest concentrations being observed in the leaves (113.68μgg^-1 Fresh weight (FW)) when exposed to 500μgL^-1 MCs. Root activity at 500μgL^-1 decreased 37%, compared to the control. MCs also induced disruption of the antioxidant system and lipid peroxidation in rice roots. Root growth was significantly inhibited by MCs. Root weight, length; surface area and volume were significantly decreased, as well as crown root number and lateral root number. After 30 days exposure to MCs, an increase was found in tartaric acid and malic acid while the other organic acids were not affected. Glycine, tyrosine, and glutamate were the only amino acids stimulated at MCs concentrations of 500μgL^-1. Similarly, dissolved organic carbon (DOC) and carbohydrate at 50 and 500μgL^-1 treatments were significantly increased. The increase of DOC and carbohydrate in root exudates was due to rice root membrane permeability changes induced by MCs. Overall, this study indicated that MCs significantly inhibited rice root growth and affected root exudation.

Comparison of the effects of poultry manure and its biochar on barley growth in petroleum-contaminated soils

This study was conducted to evaluate and compare the effectiveness of two organic amendments [poultry manure (PM) and poultry manure biochar (PMB)] for the degradation of petroleum hydrocarbons in contaminated soils by barley plant at three levels of total petroleum hydrocarbons (TPHs) during 5 months under greenhouse conditions. TPHs removal efficiency and microbial respiration were shown to be higher at soil-cultivated plant than at uncultivated soil and in lowest level of contamination rather than other levels of contamination and at organic amendment treatment than unamended soil. Soil microbial respiration and TPHs degradation in the rhizosphere of barley increased by 15.64 and 12.74% for PM-amended treatment and 28.07 and 26.83% for PMB-amended treatment, respectively, in the 4% TPHs level compared with unamended treatment. Comparison of two amendments showed that in PMB treatment soil, highest dry weight, microbial respiration, and TPHs degradation potential were observed.

Preliminary study of phytoremediation of brownfield soil contaminated by PAHs

Our project was aimed at improving a brownfield in the city of Kladno, where an old steel producing facility used to be in operation. Ecological risk is mainly caused by the processing of co-products during coal production (tars, oils). Knowledge of toxicology and environmental aspects can help us protect human health and the environment. Primarily, we focused on soil sampling and identification of pollutants. Results showed that organic contamination on the site is very high. Average concentration of total petroleum carbon in the soil was about 13g/kg DW, which is much more than the maximum allowed concentration. For selection of suitable plant species for phytoremediation at the site, experiments were conducted in a greenhouse. Biomass growth, root morphology, and pigment content in the leaves of Brassica napus var. Opus-C1 and Sorghum×drummondii var. Honey Graze BMR plants were studied. Plant analysis confirmed that polyaromatic hydrocarbons (PAHs) accumulated in the shoots of both plant species. B. napus plants grown on Poldi soil in a greenhouse were able to survive the toxicity of PAHs in soil, and their ability to accumulate PAHs from soil was evident. However, more studies are needed to decide if the plants are usable for phytoremediation of this brownfield.

Comparative transcriptome analysis of soybean response to bean pyralid larvae

BACKGROUND

Soybean is one of most important oilseed crop worldwide, however, its production is often limited by many insect pests. Bean pyralid is one of the major soybean leaf-feeding insects in China. To explore the defense mechanisms of soybean resistance to bean pyralid, the comparative transcriptome sequencing was completed between the leaves infested with bean pyralid larvae and no worm of soybean (Gantai-2-2 and Wan82-178) on the Illumina HiSeq™ 2000 platform.

RESULTS

In total, we identified 1744 differentially expressed genes (DEGs) in the leaves of Gantai-2-2 (1064) and Wan82-178 (680) fed by bean pyralid for 48 h, compared to 0 h. Interestingly, 315 DEGs were shared by Gantai-2-2 and Wan82-178, while 749 and 365 DEGs specifically identified in Gantai-2-2 and Wan82-178, respectively. When comparing Gantai-2-2 with Wan82-178, 605 DEGs were identified at 0 h feeding, and 468 DEGs were identified at 48 h feeding. Gene Ontology (GO) annotation analysis revealed that the DEGs were mainly involved in the metabolic process, single-organism process, cellular process, responses to stimulus, catalytic activities and binding. Pathway analysis showed that most of the DEGs were associated with the plant-pathogen interaction, phenylpropanoid biosynthesis, phenylalanine metabolism, flavonoid biosynthesis, peroxisome, plant hormone signal transduction, terpenoid backbone biosynthesis, and so on. Finally, we used qRT-PCR to validate the expression patterns of several genes and the results showed an excellent agreement with deep sequencing.

CONCLUSIONS

According to the comparative transcriptome analysis results and related literature reports, we concluded that the response to bean pyralid feeding might be related to the disturbed functions and metabolism pathways of some key DEGs, such as DEGs involved in the ROS removal system, plant hormone metabolism, intracellular signal transduction pathways, secondary metabolism, transcription factors, biotic and abiotic stresses. We speculated that these genes may have played an important role in synthesizing substances to resist insect attacks in soybean. Our results provide a valuable resource of soybean defense genes that will benefit other studies in this field.

Removal of dimethylphenols and ammonium in laboratory-scale horizontal subsurface flow constructed wetlands

Phenolic compounds in industrial wastewaters are toxic pollutants and pose a threat to public health and ecosystems. More recently, focus is being directed toward combining the treatment of these compounds with a cost-effective and environmentally sound technology. The removal efficiency of dimethylphenol and ammonium nitrogen was studied, for the first time, in three different laboratory-scale horizontal subsurface flow constructed wetlands planted with Juncus effusus. Two of the wetlands used were filled with gravel. One of these was planted and the second left without vegetation. The third wetland was a hydroponic system. It was found that the removal efficiencies of dimethylphenol was dependent on the inflow loading of the contaminant and was higher in the planted systems. Both planted systems yielded 99% removal efficiency up to loads of 240 mg/d, compared to only 73% for the unplanted constructed wetland. Factors and processes such as redox dynamics, methanogenesis, reduction of ammonium and low nitrate and nitrite concentrations imply simultaneous aerobic and anaerobic dimethylphenol transformations. A significant surplus of organic carbon was detected in the planted wetlands, which may originate from intermediates of the dimethylphenol transformation processes and/or organic plant root exudates. The present study demonstrates that horizontal subsurface flow constructed wetlands are a promising alternative system for the treatment of effluents contaminated with dimethylphenol isomers.

Bacteria from wheat and cucurbit plant roots metabolize PAHs and aromatic root exudates: Implications for rhizodegradation

The chemical interaction between plants and bacteria in the root zone can lead to soil decontamination. Bacteria that degrade polycyclic aromatic hydrocarbons (PAHs) have been isolated from the rhizospheres of plant species with varied biological traits; however, it is not known what phytochemicals promote contaminant degradation. One monocot and two dicotyledon plants were grown in PAH-contaminated soil from a manufactured gas plant (MGP) site. A phytotoxicity assay confirmed greater soil decontamination in rhizospheres when compared to bulk soil controls. Bacteria were isolated from plant roots (rhizobacteria) and selected for growth on anthracene and chrysene on PAH-amended plates. Rhizosphere isolates metabolized 3- and 4-ring PAHs and PAH catabolic intermediates in liquid incubations. Aromatic root exudate compounds, namely flavonoids and simple phenols, were also substrates for isolated rhizobacteria. In particular, the phenolic compounds-morin, caffeic acid, and protocatechuic acid-appear to be linked to bacterial degradation of 3- and 4-ring PAHs in the rhizosphere.

Variation in soil aggregate-size distribution affects the dissipation of polycyclic aromatic hydrocarbons in long-term field-contaminated soils

Soil organic matter (SOM) is the main adsorbent for polycyclic aromatic hydrocarbons (PAHs) and the principal aggregating agent for soil aggregation that can affect PAH bioavailability and bioaccessibility in soils. The objective of this study was to analyze the relationship between PAH dissipation and variation in soil aggregate-size distribution in two field-contaminated soils with different soil organic C (SOC) content (Anthrosols, 1.41% SOC; Phaeozems, 8.51% SOC) in phytoremediation with alfalfa. The results showed that there were significant reductions of 10.2 and 15.4% of the total PAHs in unplanted and planted treatments, respectively, for Anthrosols. However, there was no significant reduction of total PAHs in either unplanted or planted treatment for Phaeozems. For Anthrosols, mass percentages of coarse sand and fine sand were significantly reduced while coarse silt and fine silt were significantly increased for the planted soil compared to the initial soil (p < 0.05). For Phaeozems, there was no significant variation in aggregate-size distribution among different treatments except that coarse silt in planted and unplanted soil was slightly reduced. The main reason for the dissipation of PAHs in Anthrosols could be that macroaggregates were broken into microaggregates, which made some trapped PAHs become bioaccessible to soil microorganisms.

Proteomic analysis by iTRAQ-MRM of soybean resistance to Lamprosema Indicate

BACKGROUND

Lamprosema indicate is a major leaf feeding insect pest to soybean, which has caused serious yield losses in central and southern China. To explore the defense mechanisms of soybean resistance to Lamprosema indicate, a highly resistant line (Gantai-2-2) and a highly susceptible line (Wan 82-178) were exposed to Lamprosema indicate larval feedings for 0 h and 48 h, and the differential proteomic analyses of these two lines were carried out.

RESULTS

The results showed that 31 differentially expressed proteins (DEPs) were identified in the Gantai-2-2 when comparing 48 h feeding with 0 h feeding, and 53 DEPs were identified in the Wan 82-178. 28 DEPs were identified when comparing Gantai-2-2 with Wan 82-178 at 0 h feeding. The bioinformatic analysis results showed that most of the DEPs were associated with ribosome, linoleic acid metabolism, flavonoid biosynthesis, phenylpropanoid biosynthesis, peroxisome, stilbenoid, diarylheptanoid and gingerol biosynthesis, glutathione metabolism, pant hormone signal transduction, and flavone and flavonol biosynthesis, as well as other resistance related metabolic pathways. The MRM analysis showed that the iTRAQ results were reliable.

CONCLUSIONS

According to the analysis of the DEPs results, the soybean defended or resisted the Lamprosema indicate damage by the induction of a synthesis of anti-digestive proteins which inhibit the growth and development of insects, reactive oxygen species scavenging, signaling pathways, secondary metabolites synthesis, and so on.

Vetiver plantlets in aerated system degrade phenol in illegally dumped industrial wastewater by phytochemical and rhizomicrobial degradation

This research evaluated the feasibility of using vetiver plantlets (Vetiveria zizanioides (L.) Nash) on a floating platform with aeration to degrade phenol (500 mg/L) in illegally dumped industrial wastewater (IDIWW). The IDIWW sample was from the most infamous illegal dumping site at Nong Nae subdistrict, Phanom Sarakham district, Chachoengsao province, Thailand. Laboratory results suggested that phenol degradation by vetiver involves two phases: Phase I, phytopolymerization and phyto-oxidation assisted by root-produced peroxide (H₂O₂) and peroxidase (POD), followed by phase II, a combination of phase I with enhanced rhizomicrobial degradation. The first 360-400 h of phenol degradation were dominated by phytopolymerization and phyto-oxidation yielding particulate polyphenols (PPP) or particulate organic matter (POM) as by-products, while phenol decreased to around 145 mg/L. In Phase II, synergistically, rhizomicrobial growth was ∼100-folds greater on the roots of the vetiver plantlets than in the IDIWW and participated in the microbial degradation of phenol at this lower phenol concentration, increasing the phenol degradation rate by more than three folds. This combination of phytochemical and rhizomicrobiological processes eliminated phenol in IDIWW in less than 766 h (32 days), while without the vetiver plantlets, phenol degradation by aerated microbial degradation alone may require 235 days. To our knowledge, this is the first that systematically reveals the complete phenol degradation mechanism by vetiver plantlets in real aerated wastewater.

Dissipation and phytoremediation of polycyclic aromatic hydrocarbons in freshly spiked and long-term field-contaminated soils

Pot experiments were used to compare the dissipation and phytoremediation effect of alfalfa (Medicago sativa L.) for polycyclic aromatic hydrocarbons (PAHs) in a freshly spiked soil and two field-contaminated soils with different soil organic carbon (SOC) contents (Anthrosols, 1.41% SOC; Phaeozems, 8.51% SOC). In spiked soils, the dissipation rates of phenanthrene and pyrene were greater than 99.5 and 94.3%, respectively, in planted treatments and 95.0 and 84.5%, respectively, in unplanted treatments. In field-contaminated Anthrosols, there were limited but significant reductions of 10.2 and 15.4% of total PAHs in unplanted and planted treatments, respectively. In field-contaminated Phaeozems, there were no significant reductions of total PAHs in either unplanted or planted treatments. A phytoremediation effect was observed for the spiked soils and the Anthrosols, but not for the Phaeozems. The results indicated that laboratory tests with spiked soils cannot reflect the real state of field-contaminated soils. Phytoremediation efficiency of PAHs in field-contaminated soils was mainly determined by the content of SOC. Phytoremediation alone has no effect on the removal of PAHs in field-contaminated soils with high SOC content.

Physiology and bioprocess of single cell of Stenotrophomonas maltophilia in bioremediation of co-existed benzo[a]pyrene and copper

Polycyclic aromatic hydrocarbons (PAHs) and heavy metals are generally present in mixtures in the e-waste dismantling areas, posing serious health risk to the local people. Bioremediation has been considered as a promising approach for PAHs and heavy metals removal. In this study, we applied flow cytometry to obtain a better understanding of membrane potential (MP), apoptosis and cell cycle of Stenotrophomonas maltophilia affected by combined pollutants of benzo[a]pyrene(BaP) and Cu(II). The results showed that BaP was the main factor damaging the cell membrane and influencing the MP. S. maltophilia could even protect against upsetting situation by encouraging early apoptosis, whereby compromised cells committed suicide, as a result, which, in turn, facilitated the metabolism of the bacteria with high-vitality. Furthermore, even if the bacterial cell division was blocked and stopped reproduction, a large number of key enzymes inside cells could still be used for degradation of BaP. The expression of protein related to the transport and metabolism of BaP, regulation of redox reactions and phosphorylation in bacterial cell during bioprocess were evident different.

Detoxification of polycyclic aromatic hydrocarbons (PAHs) in Arabidopsis thaliana involves a putative flavonol synthase

Polycyclic aromatic hydrocarbons (PAHs) are environmental contaminants with cytotoxic, teratogenic and carcinogenic properties. Bioremediation studies with bacteria have led to the identification of dioxygenases (DOXs) in the first step to degrade these recalcitrant compounds. In this study, we characterized the role of the Arabidopsis thaliana AT5G05600, a putative DOX of the flavonol synthase family, in the transformation of PAHs. Phenotypic analysis of loss-of-function mutant lines showed that these plant lines were less sensitive to the toxic effects of phenanthrene, suggesting possible roles of this gene in PAH degradation in vivo. Interestingly, these mutant lines showed less accumulation of H₂O₂ after PAH exposure. Transgenic lines over-expressing At5g05600 showed a hypersensitive response and more oxidative stress after phenanthrene treatments. Moreover, fluorescence spectra results of biochemical assays with the recombinant His-tagged protein AT5G05600 detected chemical modifications of phenanthrene. Taken together, these results support the hypothesis that AT5G05600 is involved in the catabolism of PAHs and the accumulation of toxic intermediates during PAH biotransformation in plants. This research represents the first step in the design of transgenic plants with the potential to degrade PAHs, leading to the development of vigorous plant varieties that can reduce the levels of these pollutants in the environment.