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Delgado H, Martín JP. Assessment of Genetic Diversity in Quinoa Landraces Cultivated in the Ecuadorian Highlands Since the Early 1980s. PLANTS (BASEL, SWITZERLAND) 2025; 14:635. [PMID: 40094541 PMCID: PMC11902158 DOI: 10.3390/plants14050635] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2025] [Revised: 02/14/2025] [Accepted: 02/17/2025] [Indexed: 03/19/2025]
Abstract
Quinoa (Chenopodium quinoa Willd.) landraces have been cultivated ancestrally in the Andean highlands of Ecuador, where they have had great social and nutritional importance for the native population. Currently, there is scarce information on its genetic diversity and conservation status, and none on the changes that may have occurred in recent decades. In this study, we assessed the genetic diversity of 268 accessions (1340 samples; five per accession) of quinoa landraces collected at two different times (1978-1988 and 2014-2015) in three representative Ecuadorian Andean provinces for this crop (Imbabura, Cotopaxi and Chimborazo) using eight simple sequence repeat (SSR) markers. A total of 124 alleles were found, with a range of 11-24 per locus (mean = 15.5). Averages of expected heterozygosity (He) and Shannon information index (I) were 0.763 and 1.821, respectively. The most informative loci were 3_QAAT050 and 7_QAAT100, with discrimination power (D) values above 92%. Moreover, 1055 different genotypes were found, of which 939 were unique genotypes. This high level of genetic diversity could be explained by the intensive exchange of seeds between farmers in the Andean region. In addition, no significant differences were found in the main genetic diversity parameters between collections and/or provinces. If there is no significant quantitative loss of genetic diversity over the last four decades, this would indicate that indigenous farming communities of this Andean region are preserving their ancestral quinoa germplasm reasonably well. Furthermore, two genetic groups were found with a genetic distance of 0.337. Samples in these groups appear to be related to their provincial origin. This may be due to the different ways in which quinoa landraces are managed and conserved in the different Andean provinces. The results obtained may be very useful for the suitable management and conservation of this ancestral plant genetic resource, both on farm by indigenous farming communities and ex situ by the Germplasm Bank of the Ecuadorian National Institute for Agricultural Research (INIAP).
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Affiliation(s)
| | - Juan Pedro Martín
- Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Avda. Puerta de Hierro 2-4, 28040 Madrid, Spain;
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2
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Yılmaz Tuncel N, Polat Kaya H, Andaç AE, Korkmaz F, Tuncel NB. A Comprehensive Review of Antinutrients in Plant-Based Foods and Their Key Ingredients. NUTR BULL 2025. [PMID: 39895386 DOI: 10.1111/nbu.12732] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2024] [Revised: 10/28/2024] [Accepted: 01/14/2025] [Indexed: 02/04/2025]
Abstract
In recent years, the growing popularity of vegan and vegetarian diets, along with the rising demand for plant-based foods, has led researchers to concentrate on examining the presence and effects of antinutrients. While there are existing literature reviews focusing on antinutritional compounds, particularly on their reduction, this review aims to provide a comprehensive description of antinutrients for producers, food scientists, professionals, legislators and consumers, emphasising the complexity of the subject and the necessity for diverse approaches while identifying aspects that still require further research. Antinutrients, including protease inhibitors, amylase inhibitors, phytic acid, lectins, saponins, tannins, cyanogenic glycosides, oxalic acid, polyphenols, goitrogens and pyrimidine glycosides, are described, encompassing various aspects such as their structural characteristics, analytical detection methods, distribution, physiological impacts and strategies for mitigation or elimination. Specifically, our review concentrates on assessing the presence of antinutrients in plant-based food products and the primary ingredients, categorised into five distinct groups, cereals, pseudocereals, pulses, seeds and nuts, which are commonly used in their production. Among these categories, legumes are identified as the richest source of anti-nutritional compounds, followed by cereal grains. However, certain pseudocereals, seeds and nuts also demonstrate high levels of specific antinutrients. While antinutrients are generally regarded as harmful to nutrient absorption, recent studies have revealed some potential health benefits associated with them. Therefore, further in vivo research is essential to elucidate the behaviour of antinutritional compounds within the human body. Additionally, there is a significant lack of formal regulations and guidelines regarding antinutrients, and food products currently do not feature labelling related to these compounds.
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Affiliation(s)
- Neşe Yılmaz Tuncel
- Department of Food Technology, Faculty of Applied Sciences, Çanakkale Onsekiz Mart University, Çanakkale, Türkiye
| | - Havva Polat Kaya
- Department of Food Technology, Faculty of Applied Sciences, Çanakkale Onsekiz Mart University, Çanakkale, Türkiye
| | - Ali Emre Andaç
- Department of Food Engineering, Faculty of Engineering, Çanakkale Onsekiz Mart University, Çanakkale, Türkiye
| | - Fatma Korkmaz
- Department of Food Engineering, Balıkesir University Faculty of Engineering, Balıkesir, Türkiye
| | - Necati Barış Tuncel
- Department of Food Engineering, Faculty of Engineering, Çanakkale Onsekiz Mart University, Çanakkale, Türkiye
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Khaled Y, AbdElgawad H, Hegab MM, Okla MK, AlGarawi AM, Tawfik WZ, Sayed M. Priming with multiwalled carbon nanotubes improved biomass accumulation, biological activity and metabolism of four horticultural plants during the sprouting stage. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2025; 105:2086-2100. [PMID: 39520146 DOI: 10.1002/jsfa.13994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 10/07/2024] [Accepted: 10/14/2024] [Indexed: 11/16/2024]
Abstract
BACKGROUND It is imperative to enhance the quality of sprouts since they are a rich source of various primary and secondary metabolites. The objective of this work was to examine how multiwalled carbon nanotubes (MWCNTs) priming at various concentrations affected the nutritional qualities of four horticultural plants (T. foenum-graecum, L. grandiflorum, L. sativum and A. graveolens) and their sprouting processes. RESULTS Among the four applied concentrations (10-60 mgL-1), MWCNTs at 10 and 40 mg L⁻¹ induced the highest biomass accumulation in L. grandiflorum and T. foenum-graecum, respectively, while 60 mg L⁻¹ was most effective for L. sativum and A. graveolent. MWCNTs induced growth by enhancing photosynthesis, as shown by increased chlorophyll content and rubisco activity, which rose by 27%, 17%, 23% and 12% in T. foenum-graecum, L. grandiflorum, L. sativum, and A. graveolens, respectively. Enhanced photosynthesis by MWCNTs improved sugar metabolism as indicated by increased activity of sugar metabolic enzymes such as amylase, starch synthase and invertase. This also supplied the carbon necessary for the production of primary (amino acids, fatty acids and organic acids) and secondary (flavonoids and polyphenols) metabolites. There was consistently higher activity of antioxidant enzymes (catalase and peroxidase). Interestingly, species-specific reactions to MWCNT priming were observed, where L. sativum sprouts showed the highest antioxidant activity, followed by A. graveolens. CONCLUSION MWCNT priming improves sprout growth and nutritional quality by boosting metabolic processes and antioxidant activity, presenting a promising approach for sustainable agriculture. © 2024 Society of Chemical Industry.
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Affiliation(s)
- Yasmen Khaled
- Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt
| | - Hamada AbdElgawad
- Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt
- Integrated Molecular Plant Physiology Research, Department of Biology, University of Antwerp, Antwerpen, Belgium
| | - Momtaz M Hegab
- Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt
| | - Mohammad K Okla
- Botany and Microbiology Department, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Amal Mohamed AlGarawi
- Botany and Microbiology Department, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Wael Z Tawfik
- Physics Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt
| | - Mona Sayed
- Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt
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Jangra A, Kumar V, Kumar S, Mehra R, Kumar A. Unraveling the Role of Quinoa in Managing Metabolic Disorders: A Comprehensive Review. Curr Nutr Rep 2025; 14:4. [PMID: 39753698 DOI: 10.1007/s13668-024-00600-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/04/2024] [Indexed: 01/14/2025]
Abstract
PURPOSE OF REVIEW The review aims to address the knowledge gap and promote the widespread adoption of quinoa as a functional food for improving metabolic health. By presenting a comprehensive overview of its nutritional profile and bioactive components, the review aims to increase consumers' awareness of the potential therapeutic benefits of incorporating quinoa into diets. RECENT FINDINGS Recent studies have highlighted the diverse range of bioactive compounds in quinoa, such as phytosterols, saponins, phenolic acids, phytoecdysteroids, and betalains. These compounds exhibit various health-promoting properties, such as anti-inflammatory, antioxidant, antidiabetic, and gut microbiota-modulating effects. Furthermore, research indicates that regular quinoa consumption can improve metabolic parameters, including reduced cholesterol levels, blood sugar, fat accumulation, and blood pressure. These findings highlight the potential of quinoa as a dietary tool for preventing and managing metabolic disorders, such as obesity, cardiovascular diseases, diabetes, and gut dysbiosis. The article concludes that quinoa has emerged as a promising solution to food security challenges due to its adaptability to diverse environments and rich nutritional profile. However, some findings are not consistent in the mentioned studies, therefore, well-designed cohort randomized clinical trials with diverse populations are needed. While in vivo studies are necessary to elucidate the specific mechanisms behind the potential benefits of quinoa.
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Affiliation(s)
- Aarzoo Jangra
- MMICT & BM (Hotel Management), Maharishi Markandeshwar (Deemed to be University), Mullana, India
| | - Vikram Kumar
- Department of Basic and Applied Sciences, National Institute of Food Technology Entrepreneurship and Management (NIFTEM), Sonepat, India
- Department of Food Technology, SRM University, Delhi NCR, Sonepat, 131029, India
| | - Shiv Kumar
- MMICT & BM (Hotel Management), Maharishi Markandeshwar (Deemed to be University), Mullana, India
| | - Rahul Mehra
- Symbiosis School of Culinary Arts and Nutritional Sciences, Symbiosis International University, Pune, India.
| | - Akash Kumar
- MMICT & BM (Hotel Management), Maharishi Markandeshwar (Deemed to be University), Mullana, India.
- Department of Food Technology, SRM University, Delhi NCR, Sonepat, 131029, India.
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Al-Taher F, Nemzer B. Effect of Germination on Fatty Acid Composition in Cereal Grains. Foods 2023; 12:3306. [PMID: 37685238 PMCID: PMC10487171 DOI: 10.3390/foods12173306] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Revised: 08/17/2023] [Accepted: 08/29/2023] [Indexed: 09/10/2023] Open
Abstract
Sprouted grains are gaining popularity as functional food ingredients. This study aimed to evaluate the lipid and fatty acid composition of eight sprouted grains (millet, amaranth, quinoa, wheat, rye, barley, buckwheat, and oat). The method used was germination for up to 72 h at temperatures ranging from 19-23 °C. In general, the lipid content increased in the various grains sprouted, providing a rich source of polyunsaturated fatty acids. The % oil yield ranged from 1.17 ± 0.02% in sprouted rye to 5.71 ± 0.26% in sprouted amaranth. Germinated oat showed the greatest increase in fat content, 54.3%, compared to the control. Polyunsaturated fatty acids were more prevalent in whole grains (46.9-75.6%) than saturated fatty acids (10.1-25.9%) and increased with sprouting. The primary fatty acids detected in the grains, in order of abundance, were linoleic, oleic, palmitic, linolenic, and stearic acids. Millet sprouts contained the lowest total saturated fatty acids and the highest polyunsaturated fatty acids. Amaranth had the highest amount of saturated fatty acids, while buckwheat contained the lowest quantity of polyunsaturated fatty acids. The lowest omega-6/omega-3 ratio was 7 to 1 in sprouted rye and 8 to 1 in sprouted barley.
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Affiliation(s)
| | - Boris Nemzer
- VDF FutureCeuticals, Inc., Momence, IL 60954, USA;
- Department of Food Science and Human Nutrition, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
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6
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Anuradha, Kumari M, Zinta G, Chauhan R, Kumar A, Singh S, Singh S. Genetic resources and breeding approaches for improvement of amaranth ( Amaranthus spp.) and quinoa ( Chenopodium quinoa). Front Nutr 2023; 10:1129723. [PMID: 37554703 PMCID: PMC10405290 DOI: 10.3389/fnut.2023.1129723] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 07/03/2023] [Indexed: 08/10/2023] Open
Abstract
Nowadays, the human population is more concerned about their diet and very specific in choosing their food sources to ensure a healthy lifestyle and avoid diseases. So people are shifting to more smart nutritious food choices other than regular cereals and staple foods they have been eating for a long time. Pseudocereals, especially, amaranth and quinoa, are important alternatives to traditional cereals due to comparatively higher nutrition, essential minerals, amino acids, and zero gluten. Both Amaranchaceae crops are low-input demanding and hardy plants tolerant to stress, drought, and salinity conditions. Thus, these crops may benefit developing countries that follow subsistence agriculture and have limited farming resources. However, these are underutilized orphan crops, and the efforts to improve them by reducing their saponin content remain ignored for a long time. Furthermore, these crops have very rich variability, but the progress of their genetic gain for getting high-yielding genotypes is slow. Realizing problems in traditional cereals and opting for crop diversification to tackle climate change, research should be focused on the genetic improvement for low saponin, nutritionally rich, tolerant to biotic and abiotic stresses, location-specific photoperiod, and high yielding varietal development of amaranth and quinoa to expand their commercial cultivation. The latest technologies that can accelerate the breeding to improve yield and quality in these crops are much behind and slower than the already established major crops of the world. We could learn from past mistakes and utilize the latest trends such as CRISPR/Cas, TILLING, and RNA interference (RNAi) technology to improve these pseudocereals genetically. Hence, the study reviewed important nutrition quality traits, morphological descriptors, their breeding behavior, available genetic resources, and breeding approaches for these crops to shed light on future breeding strategies to develop superior genotypes.
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Affiliation(s)
- Anuradha
- Division of Agrotechnology, Council of Scientific and Industrial Research–Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India
| | - Manisha Kumari
- Division of Agrotechnology, Council of Scientific and Industrial Research–Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India
| | - Gaurav Zinta
- Division of Biotechnology, Council of Scientific and Industrial Research–Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India
| | - Ramesh Chauhan
- Division of Agrotechnology, Council of Scientific and Industrial Research–Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India
| | - Ashok Kumar
- Division of Agrotechnology, Council of Scientific and Industrial Research–Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India
| | - Sanatsujat Singh
- Division of Agrotechnology, Council of Scientific and Industrial Research–Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India
| | - Satbeer Singh
- Division of Agrotechnology, Council of Scientific and Industrial Research–Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India
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Chaudhary N, Walia S, Kumar R. Functional composition, physiological effect and agronomy of future food quinoa (Chenopodium quinoa Willd.): A review. J Food Compost Anal 2023. [DOI: 10.1016/j.jfca.2023.105192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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Hlásná Cepková P, Dostalíková L, Viehmannová I, Jágr M, Janovská D. Diversity of quinoa genetic resources for sustainable production: A survey on nutritive characteristics as influenced by environmental conditions. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2022. [DOI: 10.3389/fsufs.2022.960159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Environmental extremes and climatic variability have enhanced the changes in numerous plant stressors. Researchers have been working to improve “major” crops for several decades to make them more adaptable and tolerant to environmental stresses. However, neglected and underutilized crop species that have the potential to ensure food and nutritional security for the ever-growing global population have received little or no research attention. Quinoa is one of these crops. It is a pseudocereal, considered a rich and balanced food resource due to its protein content and protein quality, high mineral content, and health benefits. This review provides currently available information on the genetic resources of quinoa and their quality in terms of variability of economically important traits such as yield, and the content of bioactive compounds, such as protein and amino acid composition. The influence of variety and environmental conditions on selected traits is also discussed. The various types of nutrients present in the different varieties form the basis and are key for future breeding efforts and for efficient, healthy, and sustainable food production.
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Nutritional Composition and Bioactive Components in Quinoa ( Chenopodium quinoa Willd.) Greens: A Review. Nutrients 2022; 14:nu14030558. [PMID: 35276913 PMCID: PMC8840215 DOI: 10.3390/nu14030558] [Citation(s) in RCA: 64] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2022] [Revised: 01/21/2022] [Accepted: 01/23/2022] [Indexed: 12/19/2022] Open
Abstract
Quinoa (Chenopodium quinoa Willd.) is a nutrient-rich grain native to South America and eaten worldwide as a healthy food, sometimes even referred to as a ”superfood”. Like quinoa grains, quinoa greens (green leaves, sprouts, and microgreens) are also rich in nutrients and have health promoting properties such as being antimicrobial, anticancer, antidiabetic, antioxidant, antiobesity, and cardio-beneficial. Quinoa greens are gluten-free and provide an excellent source of protein, amino acids, essential minerals, and omega-3 fatty acids. Quinoa greens represent a promising value-added vegetable that could resolve malnutrition problems and contribute to food and nutritional security. The greens can be grown year-round (in the field, high tunnel, and greenhouse) and have short growth durations. In addition, quinoa is salt-, drought-, and cold-tolerant and requires little fertilizer and water to grow. Nevertheless, consumption of quinoa greens as leafy vegetables is uncommon. To date, only a few researchers have investigated the nutritional properties, phytochemical composition, and human health benefits of quinoa greens. We undertook a comprehensive review of the literature on quinoa greens to explore their nutritional and functional significance to human health and to bring awareness to their use in human diets.
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Abd El-Moneim D, ELsarag EIS, Aloufi S, El-Azraq AM, ALshamrani SM, Safhi FAA, Ibrahim AA. Quinoa ( Chenopodium quinoa Willd.): Genetic Diversity According to ISSR and SCoT Markers, Relative Gene Expression, and Morpho-Physiological Variation under Salinity Stress. PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10122802. [PMID: 34961273 PMCID: PMC8707205 DOI: 10.3390/plants10122802] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 12/08/2021] [Accepted: 12/14/2021] [Indexed: 06/14/2023]
Abstract
Quinoa (Chenopodium quinoa Willd.) is a halophytic crop that can withstand a variety of abiotic stresses, including salt. The present research examined the mechanisms of salt tolerance in five different quinoa genotypes at four different salinity levels (control (60), 80, 120, and 160 mM NaCl). ISSR and SCoT analysis revealed high polymorphism percentages of 90.91% and 85.26%, respectively. Furthermore, ISSR 1 and SCoT 7 attained the greatest number of polymorphic amplicons (27 and 26), respectively. Notably, LINE-6 and M-28 genotypes demonstrated the greatest number of unique positive and negative amplicons (50 and 42) generated from ISSR and SCoT, respectively. Protein pattern analysis detected 11 bands with a polymorphism percentage 27.27% among the quinoa genotypes, with three unique bands distinguishable for the M-28 genotype. Similarity correlation indicated that the highest similarity was between S-10 and Regeolone-3 (0.657), while the lowest similarity was between M-28 and LINE-6 (0.44). Significant variations existed among the studied salinity treatments, genotypes, and the interactions between them. The highest and lowest values for all the studied morpho-physiological and biochemical traits were recorded at 60 and 160 mM NaCl concentrations, respectively, except for the Na and proline contents, which exhibited the opposite relationship. The M-28 genotype demonstrated the highest values for all studied characteristics, while the LINE-6 genotype represented the lowest in both seasons. On the other hand, mRNA transcript levels for CqSOS1 did not exhibit differential expression in roots and leaf tissues, while the expression of CqNHX1 was upregulated more in both tissues for the M-28 genotype than for the LINE-6 genotype, and its maximum induction was seen in the leaves. Overall, the genotypes M-28 and LINE-6 were identified as the most and least salinity-tolerant, respectively.
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Affiliation(s)
- Diaa Abd El-Moneim
- Department of Plant Production (Genetic Branch), Faculty of Environmental and Agricultural Sciences, Arish University, El-Arish 45511, Egypt
| | - Eman I. S. ELsarag
- Department of Plant Production (Agronomy Branch), Faculty of Environmental and Agricultural Sciences, Arish University, El-Arish 45511, Egypt; (E.I.S.E.); (A.M.E.-A.)
| | - Salman Aloufi
- Department of Biotechnology, Faculty of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia;
| | - Asmaa M. El-Azraq
- Department of Plant Production (Agronomy Branch), Faculty of Environmental and Agricultural Sciences, Arish University, El-Arish 45511, Egypt; (E.I.S.E.); (A.M.E.-A.)
| | - Salha Mesfer ALshamrani
- Department of Biology, College of Science, University of Jeddah, Jeddah 21959, Saudi Arabia;
| | - Fatmah Ahmed Ahmed Safhi
- Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, Riyadh 11671, Saudi Arabia;
| | - Amira A. Ibrahim
- Plant Protection and Biomolecular Diagnosis Department, Arid Lands Cultivation Research Institute, City of Scientific Research and Technological Applications, New Borg El-Arab, Alexandria 21934, Egypt
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Zhu X, Wang B, Wang X, Wei X. Screening of stable internal reference gene of Quinoa under hormone treatment and abiotic stress. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2021; 27:2459-2470. [PMID: 34924704 PMCID: PMC8639980 DOI: 10.1007/s12298-021-01094-z] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 10/20/2021] [Accepted: 10/21/2021] [Indexed: 06/14/2023]
Abstract
UNLABELLED Real-time quantitative polymerase chain reaction is the most commonly used method to accurately detect gene expression patterns. The method requires stable internal reference genes to standardize the data. However, studies have shown that there is no stable expression of internal reference genes in different tissues and under different treatments. Therefore, in order to study the optimal reference genes of quinoa under different hormones and abiotic stress, leaves and stems from quinoa seedlings treated with low temperature (4 °C), salt (200 mmol/L) and abscisic acid (200 mmol/L) were used as experimental materials. Using ACT-1, eIF, EF1α, GAPDH, TUA, TUB-9, TUB-1, H2A and L8-1 as candidate reference genes, the expression stability of these 9 quinoa candidate reference genes under different hormone treatment and abiotic stress was evaluated by using geNorm, NormFinder and BestKeeper software. The results showed that TUB-1 gene under salt stress, L8-1 gene under low temperature stress, EF-1α gene induced by ABA. PLIM2c WLIM1and WLIM2b were selected to verify the candidate internal reference genes, and finally the expression of GAPDH was most unstable under the three treatments, which was not suitable to be the internal reference gene of quinoa under specific conditions, while EF1α showed good stability under the three different treatments and was suitable to be used as the internal reference gene. In conclusion, the results of this study could provide an important reference for quantifying the expression level of reference genes in quinoa. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s12298-021-01094-z.
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Affiliation(s)
- Xiaolin Zhu
- College of Agronomy, Gansu Agricultural University, Lanzhou, 730070 China
- Gansu Provincial Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, 730070 China
- College of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070 China
| | - Baoqiang Wang
- Gansu Provincial Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, 730070 China
- College of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070 China
| | - Xian Wang
- Gansu Provincial Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, 730070 China
- College of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070 China
| | - Xiaohong Wei
- College of Agronomy, Gansu Agricultural University, Lanzhou, 730070 China
- Gansu Provincial Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou, 730070 China
- College of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070 China
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12
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da Silva PC, Ribeiro Junior WQ, Ramos MLG, Celestino SMC, Silva ADN, Casari RADCN, Santana CC, de Lima CA, Williams TCR, Vinson CC. Quinoa for the Brazilian Cerrado: Agronomic Characteristics of Elite Genotypes under Different Water Regimes. PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10081591. [PMID: 34451636 PMCID: PMC8401838 DOI: 10.3390/plants10081591] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 07/17/2021] [Accepted: 07/19/2021] [Indexed: 06/02/2023]
Abstract
Quinoa stands out as an excellent crop in the Cerrado region for cultivation in the off-season or irrigated winter season. Here, we tested the effects of different water regimes on the agronomic characteristics, physiology, and grain quality of different elite quinoa genotypes under field conditions. The experiment was conducted under field conditions at Embrapa Cerrados (Planaltina, DF, Brazil). The experimental design was in randomized blocks, in a split-plot scheme, with four replications. The plots were composed of 18 quinoa genotypes and modified BRS Piabiru (the currently used genotype), and the split-plots were divided into 4 different water regimes. The following variables were evaluated: productivity and productivity per unit of applied water (PUAA), plant height, flavonoids, anthocyanins, gas exchange, chlorophyll, leaf proline, and relative water content. Our results showed that water regimes between 309 and 389 mm can be recommended for quinoa in the Cerrado region. CPAC6 and CPAC13 presented the highest yield and PUAA under high and intermediate WRs, and hence were the most suitable for winter growth under irrigation. CPAC17 is most suitable for off-season growth under rainfed conditions, as it presented the highest PUAA under the low WRs (247 and 150). CPAC9 stood out in terms of accumulation of flavonoids and anthocyanins in all WRs. Physiological analyses revealed different responses of the genotypes to water restriction, together with symptoms of stress under lower water regimes. Our study reinforces the importance of detailed analyses of the relationship between productivity, physiology, and water use when choosing genotypes for planting and harvest in different seasons.
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Affiliation(s)
- Patrícia Carvalho da Silva
- Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília 70910970, DF, Brazil; (P.C.d.S.); (M.L.G.R.); (A.d.N.S.); (C.C.S.); (C.A.d.L.); (C.C.V.)
| | | | - Maria Lucrecia Gerosa Ramos
- Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília 70910970, DF, Brazil; (P.C.d.S.); (M.L.G.R.); (A.d.N.S.); (C.C.S.); (C.A.d.L.); (C.C.V.)
| | | | - Alberto do Nascimento Silva
- Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília 70910970, DF, Brazil; (P.C.d.S.); (M.L.G.R.); (A.d.N.S.); (C.C.S.); (C.A.d.L.); (C.C.V.)
| | | | - Charles Cardoso Santana
- Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília 70910970, DF, Brazil; (P.C.d.S.); (M.L.G.R.); (A.d.N.S.); (C.C.S.); (C.A.d.L.); (C.C.V.)
| | - Cristiane Andrea de Lima
- Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília 70910970, DF, Brazil; (P.C.d.S.); (M.L.G.R.); (A.d.N.S.); (C.C.S.); (C.A.d.L.); (C.C.V.)
| | | | - Christina Cleo Vinson
- Faculdade de Agronomia e Medicina Veterinária, Universidade de Brasília, Brasília 70910970, DF, Brazil; (P.C.d.S.); (M.L.G.R.); (A.d.N.S.); (C.C.S.); (C.A.d.L.); (C.C.V.)
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13
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Zhang DL, Wang Y, Jia BC, Tian XQ, Chu J, Yin HB, Jameson PE, Chen SH, Guo SL. Genome-Wide Identification and Expression Analysis of the β-Amylase Gene Family in Chenopodium quinoa. DNA Cell Biol 2021; 40:936-948. [PMID: 34042512 DOI: 10.1089/dna.2020.5911] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
Abstract
β-Amylase (BAM) is an important starch hydrolase, playing a role in a variety of plant growth and development processes. In this study, 22 BAM gene family members (GFMs) were identified in quinoa (Chenopodium quinoa), an ancient crop gaining modern consumer acceptance because of its nutritional qualities. The genetic structure, phylogenetic and evolutionary relationships, and expression patterns of CqBAM GFMs in different tissues, were analyzed. Phylogenetic analyses assigned the CqBAMs, AtBAMs, and OsBAMs into four clades. The CqBAM gene family had expanded due to segmental duplication. RNA-seq analysis revealed expression of the duplicated pairs to be similar, with the expression of CqBAM GFM pairs showing a degree of tissue specificity that was confirmed by reverse transcription quantitative PCR (RT-qPCR). Several CqBAM GFMs were also responsive to abiotic stresses in shoots and/or roots. In conclusion, the BAM gene family in quinoa was identified and systematically analyzed using bioinformatics and experimental methods. These results will help to elucidate the evolutionary relationship and biological functions of the BAM gene family in quinoa.
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Affiliation(s)
| | - Yu Wang
- College of Life Sciences, Yantai University, Yantai, China
| | - Bing-Chen Jia
- College of Life Sciences, Yantai University, Yantai, China
| | - Xiao-Qin Tian
- College of Life Sciences, Yantai University, Yantai, China
| | - Jing Chu
- College of Life Sciences, Yantai University, Yantai, China
| | - Hai-Bo Yin
- College of Life Sciences, Yantai University, Yantai, China
| | - Paula E Jameson
- College of Life Sciences, Yantai University, Yantai, China.,School of Biological Sciences, University of Canterbury, Christchurch, New Zealand
| | - Shi-Hua Chen
- College of Life Sciences, Yantai University, Yantai, China
| | - Shan-Li Guo
- College of Life Sciences, Yantai University, Yantai, China
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14
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Hosseini MS, Ebrahimi M, Samsampour D, Abadía J, Khanahmadi M, Amirian R, Ghafoori IN, Ghaderi-Zefrehei M, Gogorcena Y. Association analysis and molecular tagging of phytochemicals in the endangered medicinal plant licorice (Glycyrrhiza glabra L.). PHYTOCHEMISTRY 2021; 183:112629. [PMID: 33516043 DOI: 10.1016/j.phytochem.2020.112629] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Revised: 12/15/2020] [Accepted: 12/16/2020] [Indexed: 05/12/2023]
Abstract
Licorice (Glycyrrhiza glabra L.) is a medicinal plant species valued in many countries in Asia and Europe for its phytochemical characteristics. Licorice biodiversity is becoming threatened nowadays in Iran due to increasing demand and a drastic decline of its natural habitats. Therefore, licorice domestication would be necessary in the near future, and molecular breeding would help to introduce genotypes suitable for cultivation. The present study was carried out with 170 individual licorice plants sampled in the wild in 59 localizations in 21 provinces of Iran. The association of 436 polymorphic AFLP markers, produced by 15 primer combinations (EcoRI/MseI), with six phenotypic phytochemical traits was studied. The AMOVA analysis show gene diversity among and within localizations. The population structure analysis identified two main sub-populations with significant genetic variation. Significant associations were identified between three markers (E3/M40-4, E34/M4-12 and E12/M31-15) and glycyrrhizin concentration, and between four markers (E11/M34-12, E11/M34-15, E9/M7-29, and E9/M7-30) and phenolic compounds contents. Markers detected can be useful in the domestication of licorice as well as in breeding programs. Licorice sampled in four localizations (KBA1, KBA2, SKh2 and Fa1) were found to be superior in terms of glycyrrhizin and antioxidants content, and therefore they can be considered as elite genotypes which could be included in the domestication process.
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Affiliation(s)
- Marjan Sadat Hosseini
- Agricultural Biotechnology Research Institute of Iran - Isfahan Branch, Agricultural Research, Education and Extension Organization (AREEO), P.O. Box 85135-487, Isfahan, Iran; Department of Horticultural Science, Faculty of Agriculture, University of Hormozgan, P.O.Box, 3995, Bandar Abbas, Iran.
| | - Morteza Ebrahimi
- Agricultural Biotechnology Research Institute of Iran - Isfahan Branch, Agricultural Research, Education and Extension Organization (AREEO), P.O. Box 85135-487, Isfahan, Iran.
| | - Davood Samsampour
- Department of Horticultural Science, Faculty of Agriculture, University of Hormozgan, P.O.Box, 3995, Bandar Abbas, Iran.
| | - Javier Abadía
- Department of Plant Nutrition, Aula Dei Experimental Station (CSIC), P.O. Box 13034, 50059, Zaragoza, Spain.
| | - Morteza Khanahmadi
- Agricultural Biotechnology Research Institute of Iran - Isfahan Branch, Agricultural Research, Education and Extension Organization (AREEO), P.O. Box 85135-487, Isfahan, Iran.
| | - Rasool Amirian
- Agricultural Biotechnology Research Institute of Iran - Isfahan Branch, Agricultural Research, Education and Extension Organization (AREEO), P.O. Box 85135-487, Isfahan, Iran.
| | - Iman Naseh Ghafoori
- Agricultural Biotechnology Research Institute of Iran - Isfahan Branch, Agricultural Research, Education and Extension Organization (AREEO), P.O. Box 85135-487, Isfahan, Iran.
| | - Mostafa Ghaderi-Zefrehei
- Department of Genetic and Animal Breeding, Faculty of Agriculture, Yasouj University, P.O. Box 75918-74831, Yasouj, Iran.
| | - Yolanda Gogorcena
- Department of Pomology, Aula Dei Experimental Station (CSIC), P.O. Box 13034, 50059, Zaragoza, Spain.
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15
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Melini V, Melini F. Functional Components and Anti-Nutritional Factors in Gluten-Free Grains: A Focus on Quinoa Seeds. Foods 2021; 10:351. [PMID: 33562277 PMCID: PMC7915320 DOI: 10.3390/foods10020351] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 01/08/2021] [Accepted: 01/20/2021] [Indexed: 12/15/2022] Open
Abstract
Quinoa (Chenopodium quinoa Willd.) has recently received increasing interest from both scientists and consumers due to its suitability in gluten-free diets, its sustainability, and its claimed superfood qualities. The aim of this paper is to systematically review up-to-date studies on quinoa functional components and anti-nutritional factors, in order to define a baseline for food scientists approaching the investigation of quinoa phytochemicals and providing evidence for the identification of healthier sustainable foods. State of the art evaluations of phytochemical contents in quinoa seeds were obtained. It emerged that phenolic compounds are the most investigated functional components, and spectrophotometric methods have been mostly applied, despite the fact that they do not provide information about single components. Saponins are the most studied among anti-nutritional factors. Betalains, tannins, and phytoecdysteroids have been poorly explored. Information on factors affecting the phytochemical content at harvesting, such as quinoa ecotypes, crop geographical location and growing conditions, are not always available. A comprehensive characterization, encompassing several classes of functional components and anti-nutritional factors, is mainly available for quinoa varieties from South America. However, defining a standard of quality for quinoa seeds is still challenging and requires a harmonization of the analytical approaches, among others.
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Affiliation(s)
- Valentina Melini
- CREA Research Centre for Food and Nutrition, Via Ardeatina 546, I-00178 Rome, Italy;
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16
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Abstract
Quinoa (Chenopodium quinoa Willd.) is increasingly singled out as a healthy food with an excellent nutritional profile. Besides being suitable for gluten-free diets, it is rich in proteins of excellent quality and is a good source of minerals and vitamins, as well as of natural antioxidants, such as phenolic compounds. The aim of this work is to present how fermentation can affect phenolic compound content and antioxidant capacity of quinoa. It emerged that fermentation can be used to increase phenolic compound content and antioxidant capacity in both quinoa seeds and flours. The use of fermented quinoa flours allowed obtaining bread and pasta richer in phenolic compounds and with a greater antioxidant capacity. Fungi are the main starters used in quinoa seed fermentation, while Lactobacillus strains have been applied to produce sourdoughs. Quinoa has been also fermented to obtain yogurt-like beverages with a higher content in phenolic compounds and a greater antioxidant activity. Strains of Lactobacillus sp. and Bifidobacterium sp. have been used as starters.
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17
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Wang Y, Shen Q, Zhong S, Chen Y, Yang Y. Comparison of Rumen Microbiota and Serum Biochemical Indices in White Cashmere Goats Fed Ensiled or Sun-Dried Mulberry Leaves. Microorganisms 2020; 8:microorganisms8070981. [PMID: 32629932 PMCID: PMC7409109 DOI: 10.3390/microorganisms8070981] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Revised: 06/20/2020] [Accepted: 06/29/2020] [Indexed: 02/07/2023] Open
Abstract
Mulberry leaves, which have high nutritional value, have not been fully utilized. Few research systems have indicated whether mulberry leaves can replace traditional feed ingredients in goats. In this study, we investigated the effects of feeding white cashmere goats ensiled (Group E) or sun-dried mulberry leaves (Group S) on changes in ruminal microbial communities, rumen fermentation parameters and serum biochemical indices. The control group (Group C) received a typical total mixed ration (TMR). 16S rRNA gene sequencing revealed 209 genera belonging to 19 bacterial phyla dominated by Firmicutes and Bacteroidetes. Only the relative abundances of Erysipelotrichaceae_UCG-009 were significantly different among the three groups (p < 0.05). Physiological and biochemical findings revealed that only the serum leptin concentrations were significantly decreased when mulberry leaves were added to the diets (p < 0.05). Correlation analysis revealed that Ruminococcus_2 were significantly positively correlated with the butyrate concentration. These findings suggested that supplementation with mulberry leaves only induced minor changes in the abovementioned indicators, implying that the rumen fermentation status was still stable after adding mulberry leaves to the diets.
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Affiliation(s)
- Yaoyue Wang
- College of Animal Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China; (Y.W.); (Q.S.); (S.Z.)
| | - Qingmiao Shen
- College of Animal Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China; (Y.W.); (Q.S.); (S.Z.)
- College of Animal Science and Technology, China Agricultural University, Beijing 100083, China
| | - Shu Zhong
- College of Animal Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China; (Y.W.); (Q.S.); (S.Z.)
| | - Yulin Chen
- College of Animal Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China; (Y.W.); (Q.S.); (S.Z.)
- Correspondence: (Y.C.); (Y.Y.)
| | - Yuxin Yang
- College of Animal Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China; (Y.W.); (Q.S.); (S.Z.)
- Correspondence: (Y.C.); (Y.Y.)
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