Long-term in situ bioelectrochemical monitoring of biohythane process: Metabolic interactions and microbial evolution

Collaborative or competitive interactions between bacteria and methanogens on the biocorrosion of Q235A steel

Bio-corrosion of Fe (0) metals in the actual environments results from the combined action of multiple microbes rather than the single action of one type of microbe. Nevertheless, the interspecies interactions between the corrosive microorganism and co-existing microbes, as well as their effects on the bio-corrosion of Fe (0) metals, remain unclear, especially for the interspecies interactions between methanogens and co-existed bacteria in microbiota in the absence of sulfate. Herein, the interspecies interactions between methanogens and co-existed bacteria in three different kinds of methanogenic microbiota (Methanothrix, Methanospirillum, or Methanobacterium dominant) and their effects on methanogens-influenced corrosion of Q235A steel were investigated. The initial results showed that competitive interactions existed between Methanothrix/Methanospirllum and fermentative acetogenic bacteria (Clostridiaceae_1, Family_XI, Peptostreptococcaceae, Pirllulaceae, and Tannerellaceae), while collaborative interactions existed between Methanobacterium and acetate-oxidizing bacteria (Synergistaceae and Spirochaetaceae). Further analysis demonstrated that the competitive interactions obstructed the attachment of Methanothrix/Methanospirllum and promoted the formation of dense corrosion products layer on the steel surface, thereby inhibiting Methanothrix/Methanospirllum-influenced corrosion. Contrarily, the collaborative interactions promoted the attachment of Methanobacterium and the formation of porous and loose corrosion products layer on the steel surface, thereby promoting Methanobacterium-influenced corrosion. Ultimately, the corrosion rate of steel induced by the Methanobacterium dominant microbiota (0.216 ± 0.042 mm/y) was much higher than by the Methanothrix/Methanospirllum dominant microbiota (0.009-0.046 mm/y). This work provided new insights into the understanding of the effects of co-existed bacteria on the corrosion of Fe (0) metals induced by methanogens in microbiota.

Exploring the Molecular Composition of Dissolved Organic Matter and Its Connection to Microbial Communities in Industrial-Scale Anaerobic Digestion of Chicken Manure

Anaerobic digestion (AD) technology offers significant advantages in addressing environmental issues arising from the intensification of livestock production since it enables waste reduction and energy recovery. However, the molecular composition of dissolved organic matter (DOM) and its linkages to microbial biodiversity during the industrial-scale AD process of chicken manure (CM) remains unclear. In this study, the chemical structure of CM digestate-derived DOM was characterized by using multi-spectroscopic techniques and ultrahigh-resolution mass spectrometry, and the microbial composition was detected by using 16S rRNA gene sequencing. The results revealed that the DOM contained abundant free amino acids and protein-like compounds but fewer humic-like substances, identified as lignin/carboxylate-rich alicyclic molecules, lipids, and proteins/aliphatic compounds featuring enriched S5-6O1 and N1-5OX fragments. In addition, the 16S rRNA results revealed microorganisms that were centered on metabolic function in the production of volatile fatty acids, H2S/CH4, and the hydrolysis reaction in the AD process. Free amino acids and protein-like compounds were mainly associated with hydrolysis reactions and H2S production functional microorganisms. Lignin/carboxylate-rich alicyclic molecules were linked to microorganisms possessing hydrolysis reactions and, indirectly, CH4 production. This study elucidates the linkage with the microbial and molecular composition of DOM, establishing a theoretical foundation for employing AD in the disposal of CM.

Sequential bio-treatment of ammonia-rich wastewater from Chinese medicine residue utilization: Regulation of dissolved oxygen

To effectively treat actual ammonia-rich Chinese medicine residue (CMR) resource utilization wastewater, we optimized an anaerobic-microaerobic two-stage expanded granular sludge bed (EGSB) and moving bed sequencing batch reactor (MBSBR) combined process. By controlling dissolved oxygen (DO) levels, impressive removal efficiencies were achieved. Microaeration, contrasting with anaerobic conditions, bolstered dehydrogenase activity, enhanced electron transfer, and enriched the functional microorganism community. The increased relative abundance of Synergistetes and Proteobacteria facilitated hydrolytic acidification and fostered nitrogen and phosphorus removal. Furthermore, we examined the impact of DO concentration in MBSBR on pollutant removal and microbial metabolic activity, pinpointing 2.5 mg/L as the optimal DO concentration for superior removal performance and energy conservation.

Influence of oxygen partial pressure on homoacetogenesis and promotion of acetic acid accumulation through low pH regulation under microaerobic conditions

Homoacetogenesis is an important pathway for bio-utilization of CO2; however, oxygen is a key environmental influencing factor. This study explored the impact of different initial oxygen partial pressures (OPPs) on homoacetogenesis, while implementing low pH regulation enhanced acetic acid (HAc) accumulation under microaerobic conditions. Results indicated that cumulative HAc production increased by 18.2% in 5% OPP group, whereas decreases of 31.3% and 56.0% were observed in 10% and 20% OPP groups, respectively, compared to the control group. However, hydrogenotrophic methanogens adapted to microaerobic environment and competed with homoacetogens for CO2, thus limiting homoacetogenesis. Controlling influent pH 5.0 per cycle increased cumulative HAc production by 18.3% and 18.2% in 5% and 10% OPP groups, respectively, compared with the control group. Consequently, regulating low pH effectively inhibited methanogenic activity under microaerobic conditions, thus increasing HAc production. This study was expected to expand the practical application of homoacetogenesis in bio-utilization of CO2.

Riboflavin-loaded carbon cloth aids the anaerobic digestion of cow dung by promoting direct interspecies electron transfer

Cow dung generates globally due to increased beef and milk consumption, but its treatment efficiency remains low. Previous studies have shown that riboflavin-loaded conductive materials can improve anaerobic digestion through enhance direct interspecies electron transfer (DIET). However, its effect on the practical anaerobic digestion of cow dung remained unclear. In this study, carbon cloth loaded with riboflavin (carbon cloth-riboflavin) was added into an anaerobic digester treating cow dung. The carbon cloth-riboflavin reactor showed a better performance than other two reactors. The metagenomic analysis revealed that Methanothrix on the surface of the carbon cloth predominantly utilized the CO2 reduction for methane production, further enhanced after riboflavin addition, while Methanothrix in bulk sludge were using the acetate decarboxylation pathway. Furthermore, the carbon cloth-riboflavin enriched various major methanogenic pathways and activated a large number of enzymes associated with DIET. Riboflavin's presence altered the microbial communities and the abundance of functional genes relate to DIET, ultimately leading to a better performance of anaerobic digestion for cow dung.

Machine Learning in Bioelectrocatalysis

At present, the global energy crisis and environmental pollution coexist, and the demand for sustainable clean energy has been highly concerned. Bioelectrocatalysis that combines the benefits of biocatalysis and electrocatalysis produces high-value chemicals, clean biofuel, and biodegradable new materials. It has been applied in biosensors, biofuel cells, and bioelectrosynthesis. However, there are certain flaws in the application process of bioelectrocatalysis, such as low accuracy/efficiency, poor stability, and limited experimental conditions. These issues can possibly be solved using machine learning (ML) in recent reports although the combination of them is still not mature. To summarize the progress of ML in bioelectrocatalysis, this paper first introduces the modeling process of ML, then focuses on the reports of ML in bioelectrocatalysis, and ultimately makes a summary and outlook about current issues and future directions. It is believed that there is plenty of scope for this interdisciplinary research direction.

Enhanced removal of antibiotic and antibiotic resistance genes by coupling biofilm electrode reactor and manganese ore substrate up-flow microbial fuel cell constructed wetland system

Manganese ore substrate up-flow microbial fuel cell constructed wetland (UCW-MFC(Mn)) as an innovative wastewater treatment technology for purifying antibiotics and electricity generation with few antibiotic resistance genes (ARGs) generation has attracted attention. However, antibiotic purifying effects should be further enhanced. In this study, a biofilm electrode reactor (BER) that needs direct current driving was powered by a Mn ore anode (UCW-MFC(Mn)) to form a coupled system without requiring direct-current source. Removal efficiencies of sulfadiazine (SDZ), ciprofloxacin (CIP) and the corresponding ARGs in the coupled system were compared with composite (BER was powered by direct-current source) and anaerobic systems (both of BER and UCW-MFC were in open circuit mode). The result showed that higher antibiotic removal efficiency (94% for SDZ and 99.1% for CIP) in the coupled system was achieved than the anaerobic system (88.5% for SDZ and 98.2% for CIP). Moreover, electrical stimulation reduced antibiotic selective pressure and horizontal gene transfer potential in BER, and UCW-MFC further reduced ARG abundances by strengthening the electro-adsorption of ARG hosts determined by Network analysis. Bacterial community diversity continuously decreased in BER while it increased in UCW-MFC, indicating that BER mitigated the toxicity of antibiotic. Degree of modularity, some functional bacteria (antibiotic degrading bacteria, fermentative bacteria and EAB), and P450 enzyme related to antibiotic and xenobiotics biodegradation genes were enriched in electric field existing UCW-MFC, accounting for the higher degradation efficiency. In conclusion, this study provided an effective strategy for removing antibiotics and ARGs in wastewater by operating a BER-UCW-MFC coupled system.

Bioelectrochemical stability improvement by Ce-N modified carbon-based cathode in high-salt stress and mechanism research

Although microbial fuel cells (MFCs) have potential for high-salt wastewater treatment, their application is limited by poor salt tolerance, deactivation and unstable catalytic performance. This study designed Ce-C, N-C, and Ce-N modified activated carbon (Ce-N-C) based on the catalytic mechanism and salt tolerance performance of Ce and N elements to address these limitations. With activated carbon (AC) as the control, this study analyzed the stability of the four cathodes under different salinity environments using norfloxacin (NOR) as a probe to assess the effect of cathodes and salinity on MFC degradation performance. After three months, comparing with other three cathodes, the Ce-N-C cathode demonstrated superior and stable electrochemical and power generation performance. In particular, the advantages of Ce-N-C in high-salt (600 mM NaCl) environment is more significant than no-salt or low-salt. The potential of Ce-N-C-End at current density of 0 was 14.0% higher than AC-End, and the power density of the MFC with Ce-N-C cathode was 105.7 mW/m², which was 3.1 times higher than AC. Also, the stability of NOR removal under the function of Ce-N-C improved with the increase of NaCl concentration or operation time. The CeO₂(111) crystal form, N-Ce-O bond and pyridine N might be the key factors in improving the catalytic performance and salt tolerance of the Ce-N modified carbon-based cathode using XPS and XRD analysis.

Effects of biochar addition towards the treatment of blackwater in anaerobic dynamic membrane bioreactor (AnDMBR): Comparison among room temperature, mesophilic and thermophilic conditions

Effects of biochar addition on the performance of anaerobic dynamic membrane bioreactor (AnDMBR) under different temperatures for blackwater treatment was investigated. When the organic load ratios (OLR) was 1.0 g COD/L·d, the specific methane yield for the three biochar-amended reactors were 125.7, 148.0 and 182.3 mLCH₄/g COD_removed, respectively. Compare to those digesters without biochar participation, the methane production in the thermophilic reactor with biochar increased by 12% while the other two digesters increased by 6-10%. An analysis of membrane filtration resistance showed a reduction in total resistance (R_t) of 6.2 × 10¹¹-7.3 × 10¹¹ m^-1 when biochar was added to the three reactors. The thermophilic reactors with biochar increased the relative abundance of Methanothermobacter and promoted gene expression of metabolic pathways related to hydrolysis, acid production and methane production. Overall, biochar showed great potential as an inexpensive conductive material to increase methane production with reduced membrane fouling in AnDMBR systems.

The importance of rest phase and pollutant removal mechanism of tidal flow constructed wetlands (TFCW) in rural grey water treatment

This paper explored the effects of the rest phase of tidal flow constructed wetlands (TFCW) on pollutant removal and microbial communities, and further analyzed the mechanism of TFCW removal of pollutants from grey water. The results showed that the removal rate of organic matter was 69.91 ± 2.44% in the control group (NR-TFCW) without the rest phase, 94.95 ± 1.17% in the experimental group (TFCW), and 96.95 ± 2.43% in the control group (P-TFCW) with the ventilation pipe enhanced rest phase. Limiting and enhancing the oxygen supply in the emptying stage of TFCW will enhance the overlap rate of microorganisms in the upper, middle and lower layers of the reactor. Enhancing the rest phase of TFCW leaded to better aerobic removal of organic matter in the microbial community, while limiting the rest phase of TFCW results in the opposite. In addition, the species overlap rate of the top, middle and bottom layers of NR-TFCW (69.98%) and P-TFCW (54.29%) was higher than that of TFCW (11.34%). The removal of organic matter by TFCW mainly relied on the adsorption of biochar in the flood phase, and the microorganisms aerobic degraded the organic matter adsorbed on the biochar in the rest phase. And thus form a continuous cycle of adsorption and biological regeneration. The microbial community in TFCW did not have the ability to nitrify, but had the ability to remove phosphorus. Ammonia nitrogen in the influent was adsorbed by biochar or converted into cytoplasm. While the phosphorus in the influent was adsorbed by the biochar, it was also being biologically removed.

Fundamentals and recent progress in bioelectrochemical system-assisted biohythane production

Biohythane, a balanced mixture of 10%-30% v/v of hydrogen and 70%-90% v/v of methane, could be the backbone of an all-purpose future energy supply. Recently, bioelectrochemical systems (BES) became a new sensation among environmental biotechnology processes with the potential to sustainably generate biohythane. Therefore, to unleash its full potential for scaling up, researchers are consistently improving microbial metabolic pathways, novel reactors, and electrode designs. This review presents a detailed analysis of recently discovered fundamental mechanisms and science and engineering intervention of different strategies to improve the biohythane composition and production rate from BES. However, several milestones are to be achieved, for instance, improving electrode kinetics using efficient catalysts, engineered microbial communities, and improved reactor configurations, for commercializing this sustainable technology. Thus, a future perspective section is included to recommend novel research lines, mainly focusing on the microbial communities and the efficient electrocatalysts, to enhance reactor performance.

Fungus-sourced filament-array anode facilitates Geobacter enrichment and promotes anodic bio-capacitance improvement for efficient power generation in microbial fuel cells

Microbial fuel cells (MFC) are emerging as new generation eco-friendly technology for the superiorities of energy harvest and simultaneous wastewater treatment. However, the power generation performance was strongly restricted by the material/biofilm electron transfer rate. In this research, the fungus-sourced electrode with filament-array structure was firstly proposed and prepared by one-step carbonization method. After 2 h pyrolysis, the functional groups containing N and O elements highly remained in the as-prepared material, which was beneficial to the electron transfer for the current generation. The lowest electron transfer resistance was obtained at 2.2 Ω, which showed a great reduction that compared with graphite sheet anode. With filament-array structure, the lowest mass diffusion resistance was obtained at 26.9 Ω for anodic oxidation reaction, which also supported the highest current generation performance. In addition, the relative abundance of typical electrochemical bacterium Geobacter was highly improved to 45.5% with an extraordinary electroactive biofilm loading of about 1203 ± 256 μg cm^-2. More importantly, the high biocatalytic activity biofilm supported a remarkably observed bio-capacitance of about 1.14 F in 3DF_fv anode, which exhibited the highest power density in 3.5 ± 0.2 W m^-2. In addition, the fungus-sourced material was one kind of economical and readily available material. Overall, this work provided one efficient strategy for electrode preparation and higher power generation in MFCs, which would reduce the capital cost and improve the efficiency in further applications of MFCs.

Upgrade the high-load anaerobic digestion and relieve acid stress through the strategy of side-stream micro-aeration: biochemical performances, microbial response and intrinsic mechanisms

In high-load anaerobic digestion such as in kitchen waste, side-stream micro-aeration (SMA) shows excellent operational performance to direct micro-aeration (DMA). It immediately restores the acidification to stability. Methanogenic performance remained stable when organic load ratios (OLR) was further increased to 5.5 g VS/L. Enhanced enzyme activity, microbial aggregation, and proliferation of bacteria and archaea were observed in SMA. The results indicates that SMA enriched Methanosaeta (relative abundance exceeded 93%) and induced the change of the main methanogenic pathway to acetoclastic methanogenesis. Mechanisms was further explored by using metagenomic analysis, and the results show SMA avoids mass formation of ROS (reactive oxygen species) by cycling the aerated slurry, and retains benefits of trace O₂ on material and energic metabolism, which poses great application potentials and deserves further investigation.

Development of a rapid startup method of direct electron transfer-dominant methanogenic microbial electrosynthesis

The rapid startup of carbon dioxide reduction-methanogenic microbial electrosynthesis is crucial for its industrial application, and the development of cathode biofilm is the key to its industrialization. Based on the new discovery that biofilm formed by placing graphite felt in an anaerobic reactor was electroactive, with strong direct electron transfer and methanogenesis ability (24.52 mL/L/d), a new startup method was developed. The startup time was shortened by at least 20 days and charge transfer resistance was reduced by 4.45-10.78 times than common startup methods (inoculating cathode effluent or granular sludge into the cathode chamber). The new method enriched electroactive bacteria. Methanobacterium and Methanosaeta accounted for 62.04% and 34.96%, respectively. The common methods inoculating cathode effluent or granular sludge enriched hydrogenotrophic microorganisms (>95%) or Methanosaeta (54.10%) due to the local environments of cathode. This new rapid and easy startup method may support the scale-up of microbial electrosynthesis.

Study on anaerobic co-digestion of municipal sewage sludge and fruit and vegetable wastes: Methane production, microbial community and three-dimension fluorescence excitation-emission matrix analysis

Constantly increased sewage sludge (SS) and fruit and vegetable wastes (FVW) are becoming the major organic solid wastes in human society. Thus, anaerobic digestion is employed as a low carbon energy strategy to reduce their environmental pollution risk. Anaerobic co-digestion system was developed based on the carbon to nitrogen ratio strategy. Results showed that the daily biogas production was higher in co-digester, and the volumetric biogas production rate (VBPR) significantly enhanced for 1.3 ∼ 3 folds, and the highest VBPR was 2.04 L/L • day with optimal OLR of 2.083 Kg L^-1 d^-1. Analytic results indicated that co-digestion could improve the biodegradable of feedstocks, which transforming to more VFAs and biogas. Compared with mono SS digester, mixed substrates relieved ammonia nitrogen inhibition and enhanced the hydrolytic acidification and methanogenesis. Meanwhile, the excessive humification of organics was suppressed. This study supported the concepts of improving carbon recovery from SS and FVW.

Revealing the link between evolution of electron transfer capacity of humic acid and key enzyme activities during anaerobic digestion

Humic acid (HA) is an important active compound formed during anaerobic digestion process, with a complex structure and dynamic electron transfer capacity (ETC). However, the mechanisms by which these macromolecular organic compounds dynamically interact with the microbial anaerobic digestion process at different operating temperatures are still unclear. In this study, the link between the evolution of the ETC of HAs and the microbial community under mesophilic and thermophilic conditions was investigated. The results showed an increasing trend in the ETC of HAs in both mesophilic (671-1479 μmol gHA^-1) and thermophilic (774-1506 μmol gHA^-1) anaerobic digestion (AD) until day 25. The ETC was positively correlated with the bacterial community of hydrolytic and acidogenic phases, but negatively correlated with the archaeal community of the methanogenic phase. Furthermore, the relationship between ETC and key enzyme activity was explored using a co-occurrence network analysis. HAs revealed a high potential to promote key enzyme activities during hydrolysis (amylase and protease) and acidification (acetate kinase, butyrate kinase, and phosphotransacetylase) while inhibiting the key enzyme activity in the methanogenic phase during the anaerobic digestion process. Moreover, HAs formed under thermophilic conditions had a greater influence on key enzyme activities than those formed under mesophilic conditions. This study advances our understanding of the mechanisms underlying the influence of HAs on anaerobic digestion performance.

Bioelectrochemical systems with a cathode of stainless-steel electrode for treatment of refractory wastewater: Influence of electrode material on system performance and microbial community

The large-scale application of the bioelectrochemical system (BES) is limited by the cost-effective electrode materials. In this study, five kinds of stainless-steel materials were used as the cathode of the BES coupled with anaerobic digestion (BES-AD) for the treatment of diluted N, N-dimethylacetamide (DMAC) wastewater. Compared with a carbon-cloth cathode, BES-AD with a stainless-steel cathode had more engineering due to its low cost, although the operating efficiencies were slightly inferior. Stainless-steel mesh with a 100 µm aperture (SSM-100 μm) was the most cost-effective electrode and the implanted BES exhibited better COD removal efficiency, electrochemical performance and biodegradability. Analysis of microbial community revealed the synergetic effect between exoelectrogen and fermentative bacteria had been strengthened in the SSM-100 μm cathode biofilm. Function analysis of the microbial community based on PICRUSt predicted metagenomes revealed that the metabolic pathways of xenobiotics biodegradation and metabolism in the SSM-100 μm cathode were stimulated.

Reactor Designs and Configurations for Biological and Bioelectrochemical C1 Gas Conversion: A Review

Microbial C1 gas conversion technologies have developed into a potentially promising technology for converting waste gases (CO₂, CO) into chemicals, fuels, and other materials. However, the mass transfer constraint of these poorly soluble substrates to microorganisms is an important challenge to maximize the efficiencies of the processes. These technologies have attracted significant scientific interest in recent years, and many reactor designs have been explored. Syngas fermentation and hydrogenotrophic methanation use molecular hydrogen as an electron donor. Furthermore, the sequestration of CO₂ and the generation of valuable chemicals through the application of a biocathode in bioelectrochemical cells have been evaluated for their great potential to contribute to sustainability. Through a process termed microbial chain elongation, the product portfolio from C1 gas conversion may be expanded further by carefully driving microorganisms to perform acetogenesis, solventogenesis, and reverse β-oxidation. The purpose of this review is to provide an overview of the various kinds of bioreactors that are employed in these microbial C1 conversion processes.

Microbial Fuel Cell as a Bioelectrochemical Sensor of Nitrite Ions

The deteriorating environmental quality requires a rapid in situ real-time monitoring of toxic compounds in environment including water and wastewater. One of the most toxic nitrogen-containing ions is nitrite ion, therefore, it is particularly important to ensure that nitrite ions are completely absent in surface and ground waters as well as in wastewater or, at least, their concentration does not exceed permissible levels. However, no selective ion electrode, which would enable continuous measurement of nitrite ion concentration in wastewater by bioelectrochemical sensor, is available. Microbial fuel cell (MFC)-based biosensor offers a sustainable low-cost alternative to the monitoring by periodic sampling for laboratory testing. It has been determined, that at low (0.01–0.1 mg·L−1) and moderate (1.0–10 mg·L−1) concentration of nitrite ions in anolyte-model wastewater, the voltage drop in MFC linearly depends on the logarithm of nitrite ion concentration of proving the potential of the application of MFC-based biosensor for the quantitative monitoring of nitrite ion concentration in wastewater and other surface water. Higher concentrations (100–1000 mg·L−1) of nitrite ions in anolyte-model wastewater could not be accurately quantified due to a significant drop in MFC voltage. In this case MFC can potentially serve as a bioelectrochemical early warning device for extremely high nitrite pollution.