1
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VanKoten HW, Pence BC, Klinkenberg JR, Das S, Patterson SE. Synthesis and evaluation of anti-Giardia activity of oseltamivir analogs. Bioorg Med Chem Lett 2025; 116:130035. [PMID: 39577600 DOI: 10.1016/j.bmcl.2024.130035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2024] [Revised: 11/07/2024] [Accepted: 11/17/2024] [Indexed: 11/24/2024]
Abstract
We reported earlier that oseltamivir (Osm, Tamiflu®), an anti-viral agent, inhibits the attachment of trophozoites to intestinal epithelial cells and cyst production in culture. Osm also disassembles lipid rafts (LRs) and the biogenesis of extracellular vesicles (EVs) by Giardia. In the current study, we synthesized forty-one Osm analogs with the derivatization of oseltamivir phosphate. These compounds were tested on giardial growth, and cyst production. Of these, four analogs, i.e., compounds 3b, 2c, 11i, and 11d, were found to have superior activities against trophozoites and cysts compared to the parent oseltamivir. Investigation of the mechanism(s) of action of these agents are in progress and will be reported in due course.
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Affiliation(s)
- Harrison W VanKoten
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, MN 55455, United States
| | - Breanna C Pence
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519, United States
| | - James R Klinkenberg
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, MN 55455, United States
| | - Siddhartha Das
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519, United States.
| | - Steven E Patterson
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, MN 55455, United States.
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2
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McDermott PE, Fearraigh MPÓ, Horan AM, McGarrigle EM. Thiourea-catalysed conjugate additions of amines to vinyl phosphonates and phosphinates. Org Biomol Chem 2023; 21:1027-1032. [PMID: 36607271 DOI: 10.1039/d2ob02116a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Thiourea catalysts activated α,β-unsaturated phosphonates and phosphinates toward conjugate addition by amines to give β-aminophosphonates and β-aminophosphinates. The organocatalytic methodology was used to synthesise 15 β-aminophosphonates and -phosphinates in yields up to 99%. A gram-scale example furnished the corresponding β-aminophosphonate in an isolated yield of 99% with 97% catalyst recovery. Based on mechanistic experiments, hydrogen bonding between the phosphoryl oxygen and thiourea are proposed to play a crucial role in substrate activation.
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Affiliation(s)
- Peter E McDermott
- A2P CDT in sustainable chemistry and BiOrbic Bioeconomy SFI Research Centre, University College Dublin, Belfield, Dublin 4, Ireland. .,Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Martin P Ó Fearraigh
- Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Alexandra M Horan
- Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland.,SSPC, the SFI Research Centre for Pharmaceuticals, Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Eoghan M McGarrigle
- A2P CDT in sustainable chemistry and BiOrbic Bioeconomy SFI Research Centre, University College Dublin, Belfield, Dublin 4, Ireland. .,Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland.,SSPC, the SFI Research Centre for Pharmaceuticals, Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
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3
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Pogula PK, De Chatterjee A, Chi M, VanKoten HW, Das S, Patterson SE. Triazoxins: Novel nucleosides with anti-Giardia activity. Bioorg Med Chem Lett 2020; 30:127175. [PMID: 32327222 PMCID: PMC11069466 DOI: 10.1016/j.bmcl.2020.127175] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2020] [Revised: 04/05/2020] [Accepted: 04/06/2020] [Indexed: 10/24/2022]
Abstract
Novel nucleoside analogues named "triazoxins" were synthesized. Of these, two analogues were found to be highly effective against Giardia lamblia, an intestinal parasite and a major cause of waterborne infection, worldwide. While compound 7 reduced the growth of trophozoites in culture (IC50, ~5 μM), compound 21 blocked the in vitro cyst production (IC50 ~5 μM). Compound 21 was also effective against trophozoites (IC50, ~36 μM). A third analogue (compound 8) was effective against both trophozoites (IC50, ~36 μM) and cysts (IC50, ~20 μM) although at higher concentration. Thus triazoxin analogues are unique and exhibit morphology (i.e., trohozoites or cysts) -specific effects against Giardia.
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Affiliation(s)
- Praveen K Pogula
- Center for Drug Design, College of Pharmacy, Academic Health Center, University of Minnesota, Minneapolis, MN 55455, United States
| | - Atasi De Chatterjee
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519, United States
| | - Miguel Chi
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519, United States
| | - Harrison W VanKoten
- Center for Drug Design, College of Pharmacy, Academic Health Center, University of Minnesota, Minneapolis, MN 55455, United States
| | - Siddhartha Das
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519, United States.
| | - Steven E Patterson
- Center for Drug Design, College of Pharmacy, Academic Health Center, University of Minnesota, Minneapolis, MN 55455, United States.
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4
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Jiménez-Andreu MM, Bueno-Morón J, Sayago FJ, Cativiela C, Tejero T, Merino P. 1-Aminovinylphosphonate Esters as Substrates for the Diels-Alder Reaction: First Synthetic and Theoretical Study. European J Org Chem 2019. [DOI: 10.1002/ejoc.201801633] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- M. Mercedes Jiménez-Andreu
- Departamento de Química Orgánica; Instituto de Síntesis Química y Catálisis Homogénea (ISQCH); CSIC-Universidad de Zaragoza; 50009 Zaragoza Spain
| | - Jorge Bueno-Morón
- Departamento de Química Orgánica; Instituto de Síntesis Química y Catálisis Homogénea (ISQCH); CSIC-Universidad de Zaragoza; 50009 Zaragoza Spain
| | - Francisco J. Sayago
- Departamento de Química Orgánica; Instituto de Síntesis Química y Catálisis Homogénea (ISQCH); CSIC-Universidad de Zaragoza; 50009 Zaragoza Spain
| | - Carlos Cativiela
- Departamento de Química Orgánica; Instituto de Síntesis Química y Catálisis Homogénea (ISQCH); CSIC-Universidad de Zaragoza; 50009 Zaragoza Spain
| | - Tomás Tejero
- Departamento de Química Orgánica; Instituto de Síntesis Química y Catálisis Homogénea (ISQCH); CSIC-Universidad de Zaragoza; 50009 Zaragoza Spain
| | - Pedro Merino
- Instituto de Biocomputación y Física de Sistemas Complejos (BIFI); Universidad de Zaragoza; 50009 Zaragoza Spain
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5
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RNAi-Mediated Specific Gene Silencing as a Tool for the Discovery of New Drug Targets in Giardia lamblia; Evaluation Using the NADH Oxidase Gene. Genes (Basel) 2017; 8:genes8110303. [PMID: 29099754 PMCID: PMC5704216 DOI: 10.3390/genes8110303] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Revised: 10/12/2017] [Accepted: 10/31/2017] [Indexed: 11/17/2022] Open
Abstract
The microaerophilic protozoan Giardia lamblia is the agent causing giardiasis, an intestinal parasitosis of worldwide distribution. Different pharmacotherapies have been employed against giardiasis; however, side effects in the host and reports of drug resistant strains generate the need to develop new strategies that identify novel biological targets for drug design. To support this requirement, we have designed and evaluated a vector containing a cassette for the synthesis of double-stranded RNA (dsRNA), which can silence expression of a target gene through the RNA interference (RNAi) pathway. Small silencing RNAs were detected and quantified in transformants expressing dsRNA by a stem-loop RT-qPCR approach. The results showed that, in transformants expressing dsRNA of 100-200 base pairs, the level of NADHox mRNA was reduced by around 30%, concomitant with a decrease in enzyme activity and a reduction in the number of trophozoites with respect to the wild type strain, indicating that NADHox is indeed an important enzyme for Giardia viability. These results suggest that it is possible to induce the G. lamblia RNAi machinery for attenuating the expression of genes encoding proteins of interest. We propose that our silencing strategy can be used to identify new potential drug targets, knocking down genes encoding different structural proteins and enzymes from a wide variety of metabolic pathways.
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6
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Galkina MA, Bodrin GV, Goryunov EI, Goryunova IB, Ambartsumyan AA, Vasil’eva TT, Protopopova PS, Saifutiarova AE, Uryupin AB, Brel VK, Kochetkov KA. Aza-Michael reaction as an efficient method for the synthesis of first representatives of β-azahetaryl-β-diphenylphosphorylalkanones. Russ Chem Bull 2016. [DOI: 10.1007/s11172-016-1520-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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7
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HIV-1 non-nucleoside reverse transcriptase inhibitors: incorporation of benzylphosphonate moiety for solubility improvement. MENDELEEV COMMUNICATIONS 2016. [DOI: 10.1016/j.mencom.2016.03.009] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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8
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Galler DJ, Parker KA. Five Easy Pieces. The Total Synthesis of Phosphoiodyn A (and Placotylene A). Org Lett 2015; 17:5544-6. [DOI: 10.1021/acs.orglett.5b02642] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- David J. Galler
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794, United States
| | - Kathlyn A. Parker
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794, United States
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9
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Polyoxin and nikkomycin analogs: recent design and synthesis of novel peptidyl nucleosides. HETEROCYCL COMMUN 2013. [DOI: 10.1515/hc-2013-0141] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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10
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Włostowski M, Ruśkowski P, Synoradzki L. Tartaric Acid and itsO-Acyl Derivatives. Part 10. Synthesis and Applications of Tartramides, Tartrimides andO-Acyltartramides and Imides. ORG PREP PROCED INT 2012. [DOI: 10.1080/00304948.2012.715052] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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11
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Rejman D, Rabatinová A, Pombinho AR, Kovačková S, Pohl R, Zbornı́ková E, Kolář M, Bogdanová K, Nyč O, Šanderová H, Látal T, Bartůněk P, Krásný L. Lipophosphonoxins: New Modular Molecular Structures with Significant Antibacterial Properties. J Med Chem 2011; 54:7884-98. [DOI: 10.1021/jm2009343] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Dominik Rejman
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the
Czech Republic v.v.i., Flemingovo
nám. 2, 166 10 Prague 6, Czech Republic
| | - Alžbeta Rabatinová
- Institute of Microbiology, Academy of Sciences of the Czech Republic v.v.i., Vı́deňská
1083, 142 20 Prague 4, Czech Republic
| | - António R. Pombinho
- Center for Chemical Genetics and
CZ-OPENSCREEN, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic v.v.i., Vı́deňská
1083, 142 20 Prague 4, Czech Republic
| | - Soňa Kovačková
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the
Czech Republic v.v.i., Flemingovo
nám. 2, 166 10 Prague 6, Czech Republic
| | - Radek Pohl
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the
Czech Republic v.v.i., Flemingovo
nám. 2, 166 10 Prague 6, Czech Republic
| | - Eva Zbornı́ková
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the
Czech Republic v.v.i., Flemingovo
nám. 2, 166 10 Prague 6, Czech Republic
| | - Milan Kolář
- TRIOS, Ltd., Zakouřilova 142, Prague
4, 149 00, Prague, Czech Republic
- Department of Microbiology,
Faculty of Medicine and Dentistry, Palacký University Olomouc, 779 00 Olomouc, Czech Republic
| | - Kateřina Bogdanová
- Department of Microbiology,
Faculty of Medicine and Dentistry, Palacký University Olomouc, 779 00 Olomouc, Czech Republic
| | - Otakar Nyč
- Department of Medical Microbiology, Teaching Hospital Motol and Charles University in Prague, Second Faculty of Medicine, V Úvalu 84, 150 06, Prague 5,
Czech Republic
| | - Hana Šanderová
- Institute of Microbiology, Academy of Sciences of the Czech Republic v.v.i., Vı́deňská
1083, 142 20 Prague 4, Czech Republic
| | - Tomáš Látal
- TRIOS, Ltd., Zakouřilova 142, Prague
4, 149 00, Prague, Czech Republic
| | - Petr Bartůněk
- Center for Chemical Genetics and
CZ-OPENSCREEN, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic v.v.i., Vı́deňská
1083, 142 20 Prague 4, Czech Republic
| | - Libor Krásný
- Institute of Microbiology, Academy of Sciences of the Czech Republic v.v.i., Vı́deňská
1083, 142 20 Prague 4, Czech Republic
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12
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Enríquez-Flores S, Rodríguez-Romero A, Hernández-Alcántara G, Oria-Hernández J, Gutiérrez-Castrellón P, Pérez-Hernández G, de la Mora-de la Mora I, Castillo-Villanueva A, García-Torres I, Méndez ST, Gómez-Manzo S, Torres-Arroyo A, López-Velázquez G, Reyes-Vivas H. Determining the molecular mechanism of inactivation by chemical modification of triosephosphate isomerase from the human parasite Giardia lamblia: a study for antiparasitic drug design. Proteins 2011; 79:2711-24. [PMID: 21786322 DOI: 10.1002/prot.23100] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2010] [Revised: 05/17/2011] [Accepted: 05/27/2011] [Indexed: 11/06/2022]
Abstract
Giardiasis, the most prevalent intestinal parasitosis in humans, is caused by Giardia lamblia. Current drug therapies have adverse effects on the host, and resistant strains against these drugs have been reported, demonstrating an urgent need to design more specific antigiardiasic drugs. ATP production in G. lamblia depends mainly on glycolysis; therefore, all enzymes of this pathway have been proposed as potential drug targets. We previously demonstrated that the glycolytic enzyme triosephosphate isomerase from G. lamblia (GlTIM), could be completely inactivated by low micromolar concentrations of thiol-reactive compounds, whereas, in the same conditions, the activity of human TIM (HuTIM) was almost unaltered. We found that the chemical modification (derivatization) of at least one Cys, of the five Cys residues per monomer in GlTIM, causes this inactivation. In this study, structural and functional studies were performed to describe the molecular mechanism of GlTIM inactivation by thiol-reactive compounds. We found that the Cys222 derivatization is responsible for GlTIM inactivation; this information is relevant because HuTIM has a Cys residue in an equivalent position (Cys217). GlTIM inactivation is associated with a decrease in ligand affinity, which affects the entropic component of ligand binding. In summary, this work describes a mechanism of inactivation that has not been previously reported for TIMs from other parasites and furthermore, we show that the difference in reactivity between the Cys222 in GlTIM and the Cys217 in HuTIM, indicates that the surrounding environment of each Cys residue has unique structural differences that can be exploited to design specific antigiardiasic drugs.
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Affiliation(s)
- Sergio Enríquez-Flores
- Laboratorio de Bioquímica-Genética, Torre de Investigación, Instituto Nacional de Pediatría, Secretaría de Salud, 04530, México, D.F
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13
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Staake M, Chauhan J, Zhou D, Shanker A, De Chatterjee A, Das S, Patterson SE. Phosphonoxins III: synthesis of α-aminophosphonate analogs of antifungal polyoxins with anti-Giardia activity. Org Lett 2010; 12:4596-9. [PMID: 20857975 PMCID: PMC2962623 DOI: 10.1021/ol101913t] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A synthesis of α-aminophosphonate analogs of polyoxins, termed phosphonoxin C1, C2, and C3, has been achieved. The key step was the addition of lithium dimethyl phosphite to the aldehyde of a protected threose derivative. α-Hydroxyphosphonate analogs C4 and C5 were also obtained by taking advantage of an unprecedented conversion of an azide to hydroxyl during treatment with hydrogen on palladium on carbon. The resulting phosphonoxin C5 inhibited the growth of an intestinal protozoan, Giardia lamblia, at low micromolar concentration.
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Affiliation(s)
- Michael Staake
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota 55455
| | - Jay Chauhan
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota 55455
| | - Ding Zhou
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota 55455
| | - Aaron Shanker
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519
| | - Atasi De Chatterjee
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519
| | - Siddhartha Das
- Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968-0519
| | - Steven E. Patterson
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota 55455
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14
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Houghton SR, Melton J, Fortunak J, Brown Ripin DH, Boddy CN. Rapid, mild method for phosphonate diester hydrolysis: development of a one-pot synthesis of tenofovir disoproxil fumarate from tenofovir diethyl ester. Tetrahedron 2010. [DOI: 10.1016/j.tet.2010.08.037] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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15
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16
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Biological Activity of Aminophosphonic Acids and Their Short Peptides. TOPICS IN HETEROCYCLIC CHEMISTRY 2009. [DOI: 10.1007/7081_2008_14] [Citation(s) in RCA: 85] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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17
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Zhou D, Staake M, Patterson SE. Phosphonoxins II: Diastereoselective Synthesis of Phosphonic Acid Analogues of Polyoxins. Org Lett 2008; 10:2179-82. [DOI: 10.1021/ol800552k] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Ding Zhou
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota 55455
| | - Michael Staake
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota 55455
| | - Steven E. Patterson
- Center for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota 55455
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18
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Rejman D, Kočalka P, Buděšínský M, Barvík I, Rosenberg I. Stereospecific N-oxide-mediated monoprotection of trans-3,4-dihydroxypyrrolidine derivatives. ACTA ACUST UNITED AC 2007. [DOI: 10.1016/j.tetasy.2007.08.022] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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