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Rachel F, Luttermann C, Höper D, Conraths FJ, Dapprich J, Maksimov P. Typing of Echinococcus multilocularis by Region-Specific Extraction and Next-Generation Sequencing of the mitogenome. Front Microbiol 2025; 16:1535628. [PMID: 40092033 PMCID: PMC11906691 DOI: 10.3389/fmicb.2025.1535628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2024] [Accepted: 02/17/2025] [Indexed: 03/19/2025] Open
Abstract
Background Infection by the fox tapeworm Echinococcus multilocularis may lead to a severe zoonosis in humans, alveolar echinococcosis, which may be fatal if left untreated. Typing is important to understand the epidemiology of this parasite, yet there is limited knowledge on the microdiversity of E. multilocularis on the local scale, since the typing resolution of established methods is restricted. Methods The mitogenome of E. multilocularis was used as the target regions to modify, apply and validate the Region-Specific Extraction (RSE) method in combination with Next-Generation Sequencing (NGS). Single Nucleotide Polymorphisms (SNPs) were detected in the mitochondrial DNA (mtDNA) and analysed bioinformatically. To validate the success and the accuracy of the RSE protocol, the mitogenomes of some E. multilocularis isolates were also analysed by the Whole-Genome Sequencing (WGS). Results With the chosen combination of methods, the entire mitogenome (~13 kb) of E. multilocularis could be captured and amplified. The read depth (median ≥ 156X) was sufficient to detect existing SNPs. The comparison of mitogenome sequences extracted by RSE with mitogenome sequences obtained by WGS showed that the accuracy of the RSE method was consistently comparable to direct Whole-Genome Sequencing. Conclusion The results demonstrate that the RSE method in combination with NGS is suitable to analyse the microdiversity of E. multilocularis at the whole mitogenome level. For the capture and sequencing of large (several kb) genomic regions of E. multilocularis and other applications, this method can be very helpful.
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Affiliation(s)
- Franziska Rachel
- National Reference Laboratory for Echinococcosis, Institute of Epidemiology, Friedrich-Loeffler-Institut - Federal Research Institute for Animal Health (FLI), Greifswald, Germany
- Department of Biology, Faculty of Mathematics and Natural Sciences, University of Greifswald, Greifswald, Germany
| | - Christine Luttermann
- Laboratory for Antiviral Immunity, Institute of Immunology, Friedrich-Loeffler-Institut - Federal Research Institute for Animal Health (FLI), Greifswald, Germany
| | - Dirk Höper
- Laboratory for NGS-Based Pathogen Characterization and Animal Disease Diagnostics, Institute of Diagnostic Virology, Friedrich-Loeffler-Institut - Federal Research Institute for Animal Health (FLI), Greifswald, Germany
| | - Franz Josef Conraths
- National Reference Laboratory for Echinococcosis, Institute of Epidemiology, Friedrich-Loeffler-Institut - Federal Research Institute for Animal Health (FLI), Greifswald, Germany
| | | | - Pavlo Maksimov
- National Reference Laboratory for Echinococcosis, Institute of Epidemiology, Friedrich-Loeffler-Institut - Federal Research Institute for Animal Health (FLI), Greifswald, Germany
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Umhang G, Bastien F, Cartet A, Ahmad H, van der Ark K, Berg R, Bonelli P, Davidson RK, Deplazes P, Deksne G, Gargate MJ, Van der Giessen J, Jamil N, Jokelainen P, Karamon J, M'Rad S, Maksimov P, Oudni-M'Rad M, Muchaamba G, Oksanen A, Pepe P, Poulle ML, Rinaldi L, Samorek-Pieróg M, Santolamazza F, Santoro A, Santucciu C, Saarma U, Schnyder M, Villena I, Wassermann M, Casulli A, Boué F. Detection of Echinococcus spp. and other taeniid species in lettuces and berries: Two international multicenter studies from the MEmE project. Int J Food Microbiol 2025; 430:111059. [PMID: 39787752 DOI: 10.1016/j.ijfoodmicro.2025.111059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 11/15/2024] [Accepted: 01/04/2025] [Indexed: 01/12/2025]
Abstract
Cystic and alveolar echinococcosis are severe zoonotic diseases characterized by long asymptomatic periods lasting months or years. Viable Echinococcus spp. eggs released into the environment through the feces of canids can infect humans through accidental ingestion via hand-to-mouth contact or consumption of contaminated food or water. Both Echinococcus multilocularis and Echinococcus granulosus sensu lato are considered as foodborne parasites. However, when considering possible pathways of human infection, it appears that food and water-borne related variables do not significantly increase the risk of infection. Providing evidence-based data for the presence of DNA and, potentially, eggs in fresh produce is crucial in understanding foodborne transmission of Echinococcus spp. to humans. Two multicenter and multicountry studies were conducted within the One Health EJP framework to estimate the proportion of lettuces and berries contaminated by E. multilocularis, E. granulosus sensu lato, and other taeniid DNAs from a total of 12 European countries, Tunisia and Pakistan. A total of 1117 lettuces, 71 others vegetables, 300 strawberries, 130 blueberries and 50 others berries samples were collected and analysed by washing, sequential sieving and real-time PCRs. E. multilocularis DNA was detected in 1.2 % (7/570) of lettuce samples tested from the seven European endemic countries (Denmark, France, Germany, Latvia, the Netherlands, Poland and Switzerland) and in 2 % (2/100) from Pakistan. E. granulosus sensu lato DNA was identified in 1.3 % of lettuces (9/695) collected in five European endemic countries (France, Italy, Latvia, Poland and Portugal) and in 12 % (9/75) and 4 % (4/100) from Tunisia and Pakistan, respectively. All E. granulosus sensu lato samples were identified as E. granulosus sensu stricto (20/22), except for two identified as E. canadensis (2/22) from Latvia and Pakistan. Regarding berries, E. multilocularis DNA was detected in 5.4 % (n = 11/202) of strawberries, 7.3 % (6/82) of blueberries from the seven European endemic countries and 56 % (14/25) of blueberries from Pakistan. High contamination rates of E. granulosus sensu stricto were found outside of Europe, with 12.0 % (3/25) in blueberries from Pakistan and 81.3 %. (13/16) in strawberries from Tunisia. The total contamination rate of all taeniid species DNA in lettuces (5.3 %; 59/1117), others vegetables (5.6 %; 4/71) and berries (12.1 %; 58/480) suggests that the transfer of taeniid eggs from carnivore feces to food is not uncommon. Although we assume that eggs are the source of the DNA detected in this study, the viability of such eggs is unknown. The detection of Echinococcus species in lettuces and berries suggests a potential risk of foodborne human infection. The relative contribution of this risk remains to be estimated. Further studies on food and environmental contamination are necessary to cover different epidemiological contexts and social habits, leading to a better understanding of human infections by Echinococcus spp. eggs.
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Affiliation(s)
- Gérald Umhang
- Anses, Nancy Laboratory for Rabies and Wildlife, Malzéville, France.
| | - Fanny Bastien
- Anses, Nancy Laboratory for Rabies and Wildlife, Malzéville, France
| | - Alexandra Cartet
- Anses, Nancy Laboratory for Rabies and Wildlife, Malzéville, France
| | - Haroon Ahmad
- Department of Biosciences, COMSATS University Islamabad (CUI), Pakistan
| | - Kees van der Ark
- Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), Bilthoven, the Netherlands
| | - Rebecca Berg
- Laboratory of Parasitology, Department of Bacteria, Parasites & Fungi, Statens Serum Institut, Copenhagen, Denmark
| | - Piero Bonelli
- WOAH and NRL for Echinococcosis, Animal Health, IZS della Sardegna, Sassari, Italy
| | | | - Peter Deplazes
- Institute of Parasitology, Vetsuisse Faculty, University of Zürich, Zürich, Switzerland
| | - Gunita Deksne
- Institute of Food Safety, Animal Health and Environment BIOR, Riga, Latvia; Faculty of Biology, University of Latvia, Riga, Latvia
| | - Maria João Gargate
- National Reference Laboratory of Parasitic and Fungal Infections, Department of Infectious Diseases, National Institute of Health Doctor Ricardo Jorge (INSA), Lisbon, Portugal
| | - Joke Van der Giessen
- Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), Bilthoven, the Netherlands
| | - Naila Jamil
- Department of Biosciences, COMSATS University Islamabad (CUI), Pakistan
| | - Pikka Jokelainen
- Infectious Disease Preparedness, Statens Serum Institut, Copenhagen, Denmark
| | - Jacek Karamon
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute/State Research Institute, Puławy, Poland
| | - Selim M'Rad
- Laboratory of Medical and Molecular Parasitology-Mycology (LP3M), LR12ES08, Faculty of Pharmacy, University of Monastir, Monastir, Tunisia
| | - Pavlo Maksimov
- Institute of Epidemiology, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Greifswald, Germany
| | - Myriam Oudni-M'Rad
- Laboratory of Medical and Molecular Parasitology-Mycology (LP3M), LR12ES08, Faculty of Pharmacy, University of Monastir, Monastir, Tunisia
| | - Gillian Muchaamba
- Institute of Parasitology, Vetsuisse Faculty, University of Zürich, Zürich, Switzerland
| | - Antti Oksanen
- Finnish Food Authority, Animal Health Diagnostic Unit (FINPAR), Oulu, Finland
| | - Paola Pepe
- Department of Veterinary Medicine and Animal Production, University of Naples Federico II, Naples, Italy
| | - Marie-Lazarine Poulle
- Epidémio-Surveillance et Circulation des Parasites dans les Environnements (ESCAPE), UR 7510, Université de Reims Champagne-Ardenne, Reims, France; CERFE, Université de Reims Champagne-Ardenne, Boult-aux-Bois, France
| | - Laura Rinaldi
- Department of Veterinary Medicine and Animal Production, University of Naples Federico II, Naples, Italy
| | | | - Federica Santolamazza
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, Italy; WHO Collaborating Centre for the Epidemiology, Detection and Control of Cystic and Alveolar Echinococcosis, Department of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy
| | - Azzurra Santoro
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, Italy; WHO Collaborating Centre for the Epidemiology, Detection and Control of Cystic and Alveolar Echinococcosis, Department of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy
| | - Cinzia Santucciu
- WOAH and NRL for Echinococcosis, Animal Health, IZS della Sardegna, Sassari, Italy
| | - Urmas Saarma
- Department of Zoology, Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
| | - Manuela Schnyder
- Institute of Parasitology, Vetsuisse Faculty, University of Zürich, Zürich, Switzerland
| | - Isabelle Villena
- Epidémio-Surveillance et Circulation des Parasites dans les Environnements (ESCAPE), UR 7510, Université de Reims Champagne-Ardenne, Reims, France; Laboratoire de Parasitologie-Mycologie, Centre National de Référence de la Toxoplasmose, Centre de Ressources Biologiques Toxoplasma, CHU Reims, Reims, France
| | - Marion Wassermann
- University of Hohenheim, Institute of Biology, Department of Parasitology, Stuttgart, Germany
| | - Adriano Casulli
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, Italy; WHO Collaborating Centre for the Epidemiology, Detection and Control of Cystic and Alveolar Echinococcosis, Department of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy
| | - Franck Boué
- Anses, Nancy Laboratory for Rabies and Wildlife, Malzéville, France
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Csulak E, Csivincsik Á, Sréter T, Solymosi N, Danka J, Káposztás Z, Nagy G, Dezsényi B. Retrospective multidisciplinary analysis of human alveolar echinococcosis in Hungary using spatial epidemiology approaches. Sci Rep 2024; 14:31435. [PMID: 39733038 PMCID: PMC11682265 DOI: 10.1038/s41598-024-83119-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2024] [Accepted: 12/11/2024] [Indexed: 12/30/2024] Open
Abstract
Human alveolar echinococcosis (HAE), which is caused by the larval stage of the Echinococcus multilocularis tapeworm, is an increasing healthcare issue in Hungary. Among the 40 known cases in the country, 25 were detected in the last five years. Our study aimed to reveal the geographically underlying risk factors associated potentially with these cases. We investigated the spatial pattern and the impact of potential risk factors of HAE by cluster analysis, and local and global regression models. Also, a questionnaire survey on the patients' lifestyle was implemented. We found two HAE hyperendemic foci in the country with very dissimilar biotic and climatic features, and controversial impact of different environmental factors. Four factors, viz. forest cover (β = 0.291, p < 0.0001), surface soil wetness (β = - 0.157, p = 0.033), fox infection rate (β = 0.369, p < 0.0001) and socio-economic development (β = - 0.216, p = 0.009), proved important countrywide. The most forested and the least developed districts showed the highest HAE risk. Among the patients, kitchen gardening (67.86%) and dog ownership (67.86%) seemed the riskiest activities. Our models detected an anomaly in one of the poorest regions of Hungary where all risk factors behaved contrary to that of the neighboring areas. This phenomenon was supposed to be the result of under-detection of the disease, and it called attention to the urgent priority of knowledge dissemination to the public and the healthcare professionals.
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Affiliation(s)
- Eszter Csulak
- Department of Surgery, Somogy County Teaching Hospital, Kaposvár, 7400, Hungary
| | - Ágnes Csivincsik
- Department of Physiology and Animal Health, Hungarian University of Agriculture and Life Sciences, Kaposvár Campus, Kaposvár, 7400, Hungary
| | - Tamás Sréter
- Laboratory Department of Bacteriology, Mycology and Parasitology, National Center for Public Health and Pharmacy, Budapest, 1097, Hungary
| | - Norbert Solymosi
- Centre for Bioinformatics, University of Veterinary Medicine, Budapest, 1078, Hungary
| | - József Danka
- Laboratory Department of Bacteriology, Mycology and Parasitology, National Center for Public Health and Pharmacy, Budapest, 1097, Hungary
| | - Zsolt Káposztás
- Department of Surgery, Somogy County Teaching Hospital, Kaposvár, 7400, Hungary
| | - Gábor Nagy
- Department of Physiology and Animal Health, Hungarian University of Agriculture and Life Sciences, Kaposvár Campus, Kaposvár, 7400, Hungary.
| | - Balázs Dezsényi
- Department of Surgery, Transplantation and Gastroenterology, Semmelweis University, Budapest, 1082, Hungary
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Samorek-Pieróg M, Cencek T, Bilska-Zając E, Korpysa-Dzirba W, Bełcik A, Sroka J, Lass A, Brzana A, Karamon J. Prevalence and genetic diversity of the lung nematode Eucoleus aerophilus in red foxes (Vulpes vulpes) in Central Europe (Poland) assessed by PCR and flotation. Sci Rep 2024; 14:24030. [PMID: 39402375 PMCID: PMC11473685 DOI: 10.1038/s41598-024-75483-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2024] [Accepted: 10/07/2024] [Indexed: 10/19/2024] Open
Abstract
Eucoleus aerophilus is the causative agent of respiratory capillariosis in wild and domestic carnivores and has sporadically affected humans. To date, this parasite has been detected in 38 countries, confirming its worldwide distribution. The aim of this study was to evaluate the prevalence of E. aerophilus in red fox populations from Central Europe and to describe the sequence variations in the partial cox1 gene of this parasite recovered from stool samples. An investigation was carried out using 342 samples of red foxes faeces investigated via seminested PCR and coproscopy. PCR results confirmed the presence of E. aerophilus DNA in 230 samples and E. boehmi DNA in 14 samples. Molecular analysis of the retrieved sequences revealed 22 haplotypes of E. aerophilus, EaPL1-EaPL22, and 4 haplotypes of E. boehmi, EbPL1-EbPL4. Coproscopic examination revealed that eggs of the Capillariidae family were most prevalent in all regions, with a mean prevalence of 73%. Furthermore, the following eggs were detected: Taeniidae (21.3%), Toxocara spp. (26.3%), Toxascaris leonina (5.3%), Trichuris vulpis (1.5%), trematodes (23.4%), hookworms (2.3%) and Mesocestoides spp. (1.8%). This study evaluated the prevalence of E. aerophilus in red fox populations in selected regions of Poland. To the best of our knowledge, this is the first molecular study on E. aerophilus in Poland.
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Affiliation(s)
- Małgorzata Samorek-Pieróg
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, Puławy, 24-100, Poland.
| | - Tomasz Cencek
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, Puławy, 24-100, Poland
| | - Ewa Bilska-Zając
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, Puławy, 24-100, Poland
| | - Weronika Korpysa-Dzirba
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, Puławy, 24-100, Poland
| | - Aneta Bełcik
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, Puławy, 24-100, Poland
| | - Jacek Sroka
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, Puławy, 24-100, Poland
| | - Anna Lass
- Institute of Maritime and Tropical Medicine Medical, Department of Tropical Parasitology, Gdańsk Medical University, Powstania Styczniowego 9b Street, Gdynia, 81-519, Poland
| | - Adam Brzana
- Regional Veterinary Laboratory, Wrocławska 170, Opole, 46-020, Poland
| | - Jacek Karamon
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, Puławy, 24-100, Poland
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Lallemand S, Oyhenart J, Valot B, Borne R, Bohard L, Umhang G, Karamon J, Konyaev S, Rönnberg C, Gottstein B, Weil-Verhoeven D, Richou C, Bresson-Hadni S, Millon L, Bellanger AP, Knapp J. Challenging the phylogenetic relationships among Echinococcus multilocularis isolates from main endemic areas. Int J Parasitol 2024; 54:569-582. [PMID: 38815855 DOI: 10.1016/j.ijpara.2024.05.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 04/05/2024] [Accepted: 05/23/2024] [Indexed: 06/01/2024]
Abstract
Alveolar echinococcosis (AE) is a rare but severe disease that affects more than 18,000 people worldwide per year. The complete sequencing of the mitochondrial genome of Echinococcus multilocularis has made it possible to study the genetic diversity of the parasite and its spatial and temporal evolution. We amplified the whole mitochondrial genome by PCR, using one uniplex and two multiplex reactions to cover the 13,738 bp of the mitogenome, and then sequenced the amplicons with Illumina technology. In total, 113 samples from Europe, Asia, the Arctic and North America were analyzed. Three major haplogroups were found: HG1, which clustered samples from Alaska (including Saint-Lawrence Island), Yakutia (Russia) and Svalbard; HG2, with samples from Asia, North America and Europe; and HG3, subdivided into three micro-haplogroups. HG3a included samples from North America and Europe, whereas HG3b and HG3c only include samples from Europe. In France, HG3a included samples from patients more recently diagnosed in a region outside the historical endemic area. A fourth putative haplogroup, HG4, was represented by only one isolate from Olkhon Island (Russia). The increased discriminatory power of the complete sequencing of the E. multilocularis mitogenome has made it possible to highlight four distinct geographical clusters, one being divided into three micro-haplogroups in France.
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Affiliation(s)
- Séverine Lallemand
- UMR CNRS 6249 Chrono-Environnement, University of Franche-Comté, 16 Route de Gray, 25030 Besançon cedex, France
| | - Jorge Oyhenart
- Instituto de Ciencias de la Tierra y Ambientales de La Pampa, Consejo Nacional de Investigaciones Científicas y Técnicas - Facultad de Ciencias Naturales Universidad Nacional de La Pampa, La Pampa, Argentina
| | - Benoit Valot
- UMR CNRS 6249 Chrono-Environnement, University of Franche-Comté, 16 Route de Gray, 25030 Besançon cedex, France
| | - Romain Borne
- UMR CNRS 6249 Chrono-Environnement, University of Franche-Comté, 16 Route de Gray, 25030 Besançon cedex, France
| | - Louis Bohard
- Department of Infectiology, University Hospital of Besançon, 25030 Besançon, France
| | - Gérald Umhang
- INTERFAS Unit, National Reference Laboratory for Echinococcus spp., Rabies and Wildlife Laboratory, ANSES, Malzéville, France
| | - Jacek Karamon
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Puławy, Poland
| | - Sergey Konyaev
- Institute of Systematics and Ecology of Animals, SB RAS, Novosibirsk, Russia
| | - Caroline Rönnberg
- Public Health Agency of Sweden, Department of Microbiology, Unit for Parasitology, Solna, Sweden
| | - Bruno Gottstein
- Institute of Infectious Diseases, Faculty of Medicine, University of Bern, CH-3012 Bern, Switzerland
| | - Delphine Weil-Verhoeven
- Department of Hepatology and Intensive Cares, University Hospital of Besançon, 25030 Besançon, France
| | - Carine Richou
- Department of Hepatology and Intensive Cares, University Hospital of Besançon, 25030 Besançon, France
| | - Solange Bresson-Hadni
- UMR CNRS 6249 Chrono-Environnement, University of Franche-Comté, 16 Route de Gray, 25030 Besançon cedex, France; Department of Parasitology-Mycology, Reference National Centre for Echinococcoses, University Hospital of Besançon, 25030 Besançon, France
| | - Laurence Millon
- UMR CNRS 6249 Chrono-Environnement, University of Franche-Comté, 16 Route de Gray, 25030 Besançon cedex, France; Department of Parasitology-Mycology, Reference National Centre for Echinococcoses, University Hospital of Besançon, 25030 Besançon, France
| | - Anne-Pauline Bellanger
- UMR CNRS 6249 Chrono-Environnement, University of Franche-Comté, 16 Route de Gray, 25030 Besançon cedex, France; Department of Parasitology-Mycology, Reference National Centre for Echinococcoses, University Hospital of Besançon, 25030 Besançon, France
| | - Jenny Knapp
- UMR CNRS 6249 Chrono-Environnement, University of Franche-Comté, 16 Route de Gray, 25030 Besançon cedex, France; Department of Parasitology-Mycology, Reference National Centre for Echinococcoses, University Hospital of Besançon, 25030 Besançon, France.
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6
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Santoro A, Santolamazza F, Cacciò SM, La Rosa G, Antolová D, Auer H, Bagrade G, Bandelj P, Basso W, Beck R, Citterio CV, Davidson RK, Deksne G, Frey CF, Fuglei E, Glawischnig W, Gottstein B, Harna J, Huus Petersen H, Karamon J, Jansen F, Jarošová J, Jokelainen P, Lundström-Stadelmann B, Maksimov P, Miljević M, Miterpáková M, Moks E, Origgi F, Ozolina Z, Ryser MP, Romig T, Šarkūnas M, Scorrano N, Saarma U, Šnábel V, Sréter T, Umhang G, Vengušt G, Žele Vengušt D, Casulli A. Mitochondrial genetic diversity and phylogenetic relationships of Echinococcus multilocularis in Europe. Int J Parasitol 2024; 54:233-245. [PMID: 38246405 DOI: 10.1016/j.ijpara.2024.01.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Revised: 11/09/2023] [Accepted: 01/14/2024] [Indexed: 01/23/2024]
Abstract
The cestode Echinococcus multilocularis is the causative agent of alveolar echinococcosis, a fatal zoonotic parasitic disease of the northern hemisphere. Red foxes are the main reservoir hosts and, likely, the main drivers of the geographic spread of the disease in Europe. Knowledge of genetic relationships among E. multilocularis isolates at a European scale is key to understanding the dispersal characteristics of E. multilocularis. Hence, the present study aimed to describe the genetic diversity of E. multilocularis isolates obtained from different host species in 19 European countries. Based on the analysis of complete nucleotide sequences of the cob, atp6, nad2, nad1 and cox1 mitochondrial genes (4,968 bp), 43 haplotypes were inferred. Four haplotypes represented 62.56 % of the examined isolates (142/227), and one of these four haplotypes was found in each country investigated, except Svalbard, Norway. While the haplotypes from Svalbard were markedly different from all the others, mainland Europe appeared to be dominated by two main clusters, represented by most western, central and eastern European countries, and the Baltic countries and northeastern Poland, respectively. Moreover, one Asian-like haplotype was identified in Latvia and northeastern Poland. To better elucidate the presence of Asian genetic variants of E. multilocularis in Europe, and to obtain a more comprehensive Europe-wide coverage, further studies, including samples from endemic regions not investigated in the present study, especially some eastern European countries, are needed. Further, the present work proposes historical causes that may have contributed to shaping the current genetic variability of E. multilocularis in Europe.
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Affiliation(s)
- Azzurra Santoro
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy; WHO Collaborating Centre for the Epidemiology, Detection and Control of Cystic and Alveolar Echinococcosis, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy.
| | - Federica Santolamazza
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy; WHO Collaborating Centre for the Epidemiology, Detection and Control of Cystic and Alveolar Echinococcosis, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy
| | - Simone M Cacciò
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy
| | - Giuseppe La Rosa
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy
| | - Daniela Antolová
- Institute of Parasitology, Slovak Academy of Sciences, Košice, Hlinkova 3, 040 01 Košice, Slovakia
| | - Herbert Auer
- Medical Parasitology, Institute of Specific Prophylaxis and Tropical Medicine, Center of Pathophysiology, Infectiology and Immunology, Medical University Vienna, Kinderspitalgasse 15, 1090 Vienna, Austria
| | - Guna Bagrade
- Latvian State Forest Research Institute "Silava", Wildlife Management Research Group, Salaspils, Rigas Street 111, LV-2169 Salaspils, Latvia
| | - Petra Bandelj
- Institute of Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, Gerbičeva 60, 1000 Ljubljana, Slovenia
| | - Walter Basso
- Institute of Parasitology, Vetsuisse Faculty, University of Bern, Länggassstrasse 122, CH-3012 Bern, Switzerland
| | - Relja Beck
- Croatian Veterinary Institute, Laboratory for Parasitology, 10000 Zagreb, Croatia
| | - Carlo V Citterio
- Centro Specialistico Fauna Selvatica, SCT2-Belluno, Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), Via Cappellari 44/A, 32100 Belluno, Italy
| | | | - Gunita Deksne
- Institute of Food Safety, Animal Health and Environment "BIOR", Lejupes Street 3, Riga LV-1076, Latvia; Faculty of Biology, University of Lavia, Jelgavas Street 1, Riga LV-1004, Latvia
| | - Caroline F Frey
- Institute of Parasitology, Vetsuisse Faculty, University of Bern, Länggassstrasse 122, CH-3012 Bern, Switzerland
| | - Eva Fuglei
- Norwegian Polar Institute, Fram Centre, NO-9296 Tromsø, Norway
| | - Walter Glawischnig
- Institute for Veterinary Disease Control Innsbruck, Austrian Agency for Health and Food Safety, Technikerstraße 70, 6020 Innsbruck, Austria
| | - Bruno Gottstein
- Institute of Parasitology, Vetsuisse Faculty, University of Bern, Länggassstrasse 122, CH-3012 Bern, Switzerland; Institute of Infectious Diseases, Faculty of Medicine, University of Bern, CH-3012 Bern, Switzerland
| | - Jiří Harna
- State Veterinary Institute Olomouc, Jakoubka ze Stribra 1, 779 00 Olomouc, Czech Republic
| | - Heidi Huus Petersen
- Danish Veterinary and Food Administration, Ministry of Food, Agriculture and Fisheries of Denmark, Stationsparken 31-33 2600, Glostrup, Denmark
| | - Jacek Karamon
- National Veterinary Research Institute, Department of Parasitology and Invasive Diseases, Partyzantow Avenue 57, 24-100 Pulawy, Poland
| | - Famke Jansen
- Institute of Tropical Medicine (ITM), Department of Biomedical Sciences, 155 Nationalestraat, B-2000 Antwerp, Belgium
| | - Júlia Jarošová
- Institute of Parasitology, Slovak Academy of Sciences, Košice, Hlinkova 3, 040 01 Košice, Slovakia
| | - Pikka Jokelainen
- Infectious Disease Preparedness, Statens Serum Institut, Artillerivej 5, DK-2300 Copenhagen S, Denmark
| | - Britta Lundström-Stadelmann
- Institute of Parasitology, Vetsuisse Faculty, University of Bern, Länggassstrasse 122, CH-3012 Bern, Switzerland; Multidisciplinary Center for Infectious Diseases, University of Bern, Länggass-Strasse 122, 3012 Bern, Switzerland
| | - Pavlo Maksimov
- Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Südufer 10, 17493 Greifswald‑Insel Riems, Germany
| | - Milan Miljević
- Department of Genetic Research, Institute for Biological Research "Siniša Stanković", National Institute of Republic of Serbia, University of Belgrade, Bulevar Despota Stefana 142, 11000 Belgrade, Serbia
| | - Martina Miterpáková
- Institute of Parasitology, Slovak Academy of Sciences, Košice, Hlinkova 3, 040 01 Košice, Slovakia
| | - Epp Moks
- National Centre for Laboratory Research and Risk Assessment, Fr. R. Kreutzwaldi 30, Tartu, Estonia
| | - Francesco Origgi
- Institute for Fish and Wildlife Health (FIWI), Department of Infectious Diseases and Pathobiology, Vetsuisse Faculty, University of Bern, Längassstrasse 122, 3012 Bern, Switzerland
| | - Zanda Ozolina
- Institute of Food Safety, Animal Health and Environment "BIOR", Lejupes Street 3, Riga LV-1076, Latvia
| | - Marie-Pierre Ryser
- Institute for Fish and Wildlife Health (FIWI), Department of Infectious Diseases and Pathobiology, Vetsuisse Faculty, University of Bern, Längassstrasse 122, 3012 Bern, Switzerland
| | - Thomas Romig
- Parasitology Unit, Institute of Biology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Mindaugas Šarkūnas
- Department of Veterinary Pathobiology, Veterinary Academy, Lithuanian University of Health Sciences, Tilžės str. 18, 47181 Kaunas, Lithuania
| | - Nathalie Scorrano
- Institute of Parasitology, Vetsuisse Faculty, University of Bern, Länggassstrasse 122, CH-3012 Bern, Switzerland
| | - Urmas Saarma
- Department of Zoology, Institute of Ecology and Earth Sciences, University of Tartu, J. Liivi 2, 50409 Tartu, Estonia
| | - Viliam Šnábel
- Institute of Parasitology, Slovak Academy of Sciences, Košice, Hlinkova 3, 040 01 Košice, Slovakia
| | - Tamás Sréter
- National Reference Laboratory of Medical Parasitology, National Public Health Center, Albert Flórián út 2-6, Budapest, Hungary
| | - Gèrald Umhang
- Anses, Nancy Laboratory for Rabies and Wildlife, National Reference Laboratory Echinococcus spp, 54220 Malzéville, France
| | - Gorazd Vengušt
- Institute of Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, Gerbičeva 60, 1000 Ljubljana, Slovenia
| | - Diana Žele Vengušt
- Institute of Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, Gerbičeva 60, 1000 Ljubljana, Slovenia
| | - Adriano Casulli
- European Union Reference Laboratory for Parasites, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy; WHO Collaborating Centre for the Epidemiology, Detection and Control of Cystic and Alveolar Echinococcosis, Department of Infectious Diseases, Istituto Superiore Di Sanità, Viale Regina Elena 299, 00161 Rome, Italy
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7
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Romig T, Wassermann M. Echinococcus species in wildlife. Int J Parasitol Parasites Wildl 2024; 23:100913. [PMID: 38405672 PMCID: PMC10884515 DOI: 10.1016/j.ijppaw.2024.100913] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 01/31/2024] [Accepted: 02/01/2024] [Indexed: 02/27/2024]
Abstract
Transmission of Echinococcus spp. in life cycles that involve mainly wildlife is well recognized for those species with small mammals as intermediate hosts (e. g. E. multilocularis), as well as for E. felidis and the 'northern' genotypes of E. canadensis (G8 and G10). In contrast, the remaining taxa of E. granulosus sensu lato are best known for their domestic life cycles, and the numerous wild mammal species (mainly ungulates) that have been recorded with cystic echinococcosis in the past were mainly considered a result of spill-over from the dog-livestock transmission system. This view was challenged with the advent of molecular characterization, allowing discrimination of the metacestodes, although the contribution of wild mammals to various Echinococcus life cycles has remained uncertain for scarcity of wildlife studies. Numerous records of cysts in wild ungulates date back to the 20th century, but cannot with certainty be allocated to the Echinococcus species and genotypes that are recognized today. This means that our current knowledge is largely restricted to studies of the past two decades that kept adding gradually to our concepts of transmission in various geographic regions. In particular, new insights were gathered in the past years on E. granulosus s.l. in wildlife of sub-Saharan Africa, but also on transmission patterns of E. multilocularis in previously neglected regions, e. g. North America. Here, an update is provided on the current state of knowledge on wild mammals as hosts for all Echinococcus species, listing >150 species of wild hosts with references, as well as estimates on their epidemiological impact and our current gaps of knowledge.
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Affiliation(s)
- Thomas Romig
- University of Hohenheim, Parasitology Unit, 70599, Stuttgart, Germany
- University of Hohenheim, Center for Biodiversity and Integrative Taxonomy, 70599, Stuttgart, Germany
| | - Marion Wassermann
- University of Hohenheim, Parasitology Unit, 70599, Stuttgart, Germany
- University of Hohenheim, Center for Biodiversity and Integrative Taxonomy, 70599, Stuttgart, Germany
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8
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Guo B, Cairen, Wu J, Wang W, Wang B, Ren Y, Aizezi M, Mi R, Zhao L, Wen H. The A2 haplotype of Echinococcus multilocularis is the predominant variant infecting humans and dogs in Yili Prefecture, Xinjiang. INFECTION, GENETICS AND EVOLUTION : JOURNAL OF MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARY GENETICS IN INFECTIOUS DISEASES 2024; 119:105581. [PMID: 38432594 DOI: 10.1016/j.meegid.2024.105581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Revised: 02/28/2024] [Accepted: 02/29/2024] [Indexed: 03/05/2024]
Abstract
Alveolar echinococcosis (AE), caused by Echinococcus multilocularis, is an important zoonotic disease. Yili Prefecture in Xinjiang is endemic for AE, however the molecular variability of E. multilocularis in this region is poorly understood. In this study, 127 samples were used for haplotypes analysis, including 79 tissues from humans, 43 liver tissues from small rodents, and 5 fecal samples from dogs. Genetic variability in E. multilocularis was studied using complete sequences of the mitochondrial (mt) genes of cytochrome b (cob), NADH dehydrogenase subunit 2 (nad2), and cytochrome c oxidase subunit 1 (cox1), using a total of 3558 bp per sample. The Asia haplotype 2 (A2) was the dominant haplotype, with 72.15% (57/79) prevalence in humans, 2.33% (1/43) in small rodents, and 80.00% (4/5) in dogs, followed by A5, the second most common haplotype, which infected 27.91% (12/43) small rodents. Haplotype network analysis showed that all haplotypes clustered together with the Asian group. Pairwise fixation index (FST) values showed lower level of genetic differentiation between different regions within the country. Compared with the sequences of E. multilocularis from North America and Europe, all concatenated sequences isolated from Yili Prefecture were highly differentiated and formed a single population. The A2 haplotype, analyzed using the cob, nad2, and cox1 genes of E. multilocularis, is the predominant variant in humans and dogs in Yili Prefecture.
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Affiliation(s)
- Baoping Guo
- State Key Laboratory of Pathogenesis, Prevention and Treatment of High Incidence Diseases in Central Asia, Clinical Medicine Institute, The First Affiliated Hospital of Xinjiang Medical University, No.137, Liyushan Road, Urumqi 830054, Xinjiang, PR China
| | - Cairen
- State Key Laboratory of Pathogenesis, Prevention and Treatment of High Incidence Diseases in Central Asia, Clinical Medicine Institute, The First Affiliated Hospital of Xinjiang Medical University, No.137, Liyushan Road, Urumqi 830054, Xinjiang, PR China
| | - Jianyong Wu
- School of public health, Xinjiang Medical University, No. 567 Shangde Road North, Urumqi 830017, Xinjiang, PR China
| | - Wenli Wang
- Animal Disease Prevention and Control Center of Gansu Province, No.41 Hongliutan Road, Chengguan Zone, Lanzhou, Lanzhou 730046, PR China
| | - Bingjie Wang
- Veterinary Research Institute, Xinjiang Academy of Animal Sciences, No. 726, Dongrong Street, Urumqi 830000, Xinjiang, PR China
| | - Yuan Ren
- State Key Laboratory of Pathogenesis, Prevention and Treatment of High Incidence Diseases in Central Asia, Clinical Medicine Institute, The First Affiliated Hospital of Xinjiang Medical University, No.137, Liyushan Road, Urumqi 830054, Xinjiang, PR China
| | - Mayire Aizezi
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi 830052, Xinjiang, PR China
| | - Rongsheng Mi
- Key Laboratory of Animal Parasitology of Ministry of Agriculture, Laboratory of Quality and Safety Risk Assessment for Animal Products on Biohazards (Shanghai) of Ministry of Agriculture, Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai 200241, PR China
| | - Li Zhao
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi 830052, Xinjiang, PR China
| | - Hao Wen
- State Key Laboratory of Pathogenesis, Prevention and Treatment of High Incidence Diseases in Central Asia, Clinical Medicine Institute, The First Affiliated Hospital of Xinjiang Medical University, No.137, Liyushan Road, Urumqi 830054, Xinjiang, PR China
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9
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Sacheli R, Knapp J, Pholien C, Egrek S, Léonard P, Giot JB, Delaere B, Blétard N, Gofflot S, Nollevaux MC, Meunier P, Lovinfosse P, Pirotte B, Truyens C, Millon L, Detry O, Hayette MP. Genetic diversity of Echinococcus multilocularis specimens isolated from Belgian patients with alveolar echinococcosis using EmsB microsatellites analysis. INFECTION, GENETICS AND EVOLUTION : JOURNAL OF MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARY GENETICS IN INFECTIOUS DISEASES 2023; 116:105531. [PMID: 37992792 DOI: 10.1016/j.meegid.2023.105531] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Revised: 11/06/2023] [Accepted: 11/19/2023] [Indexed: 11/24/2023]
Abstract
The genetic diversity of Echinococcus multilocularis (E. multilocularis) specimens isolated from patients with alveolar echinococcosis (AE), is a major field of investigation to correlate with sources of infection, clinical manifestations and prognosis of the disease. Molecular markers able to distinguish samples are commonly used worldwide, including the EmsB microsatellite. Here, we report the use of the EmsB microsatellite polymorphism data mining for the retrospective typing of Belgian specimens of E. multilocularis infecting humans. A total of 18 samples from 16 AE patients treated between 2006 and 2021 were analyzed through the EmsB polymorphism. Classification of specimens was performed through a dendrogram construction in order to compare the similarity among Belgian samples, some human referenced specimens on the EWET database (EmsB Website for the Echinococcus Typing) and previously published EmsB profiles from red foxes circulating in/near Belgium. According to a comparison with human European specimens previously genotyped in profiles, the 18 Belgian ones were classified into three EmsB profiles. Four specimens could not be assigned to an already known profile but some are near to EWET referenced samples. This study also highlights that some specimens share the same EmsB profile with profiles characterized in red foxes from north Belgium, the Netherlands, Luxembourg and French department near to the Belgian border. Furthermore, Belgian specimens present a genetic diversity and include one profile that don't share similarities with the ones referenced in the EWET database. However, at this geographical scale, there is no clear correlation between EmsB profiles and geographical location. Further studies including additional clinical samples and isolates from foxes and rodents of south Belgium are necessary to better understand the spatial and temporal circumstances of human infections but also a potential correlation between EmsB profiles and parasite virulence.
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Affiliation(s)
- Rosalie Sacheli
- University Hospital of Liege, Department of Clinical Microbiology - Belgian National reference laboratory for Echinococcosis, Center for Interdisciplinary Research on Medicines (CIRM), Liege, Belgium.
| | - Jenny Knapp
- University of Franche-Comté Laboratory Chrono-environment UMR CNRS 6249, Besançon, France; University Hospital of Besançon, Department of Parasitology-Mycology, National Reference Center Echinococcosis, Besançon, France
| | - Caroline Pholien
- University Hospital of Liege, Department of Clinical Microbiology - Belgian National reference laboratory for Echinococcosis, Center for Interdisciplinary Research on Medicines (CIRM), Liege, Belgium
| | - Sabrina Egrek
- University Hospital of Liege, Department of Clinical Microbiology - Belgian National reference laboratory for Echinococcosis, Center for Interdisciplinary Research on Medicines (CIRM), Liege, Belgium
| | - Philippe Léonard
- University Hospital of Liege, Department of infectiology, Liege, Belgium; EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium
| | - Jean-Baptiste Giot
- University Hospital of Liege, Department of infectiology, Liege, Belgium; EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium
| | - Bénédicte Delaere
- EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium; Catholic University of Louvain, CHU-UCL Namur, Department of infectiology, Yvoir, Belgium
| | - Noella Blétard
- EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium; University Hospital of Liege, Department of Anatomopathology, Liege, Belgium
| | - Stéphanie Gofflot
- University Hospital of Liege - Biobank of the University Hospital of Liege, Liege, Belgium
| | | | - Paul Meunier
- EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium; University Hospital of Liege, Department of Radiology, Liege, Belgium
| | - Pierre Lovinfosse
- EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium; University Hospital of Liege, Department of Nuclear Medicine and Oncological Imaging, Liege, Belgium
| | - Benoit Pirotte
- CHR Citadelle Hospital, Department of Infectious Diseases, Liege, Belgium
| | - Carine Truyens
- Free University of Brussels, Department of parasitology, Brussels, Belgium
| | - Laurence Millon
- University of Franche-Comté Laboratory Chrono-environment UMR CNRS 6249, Besançon, France; University Hospital of Besançon, Department of Parasitology-Mycology, National Reference Center Echinococcosis, Besançon, France
| | - Olivier Detry
- EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium; University Hospital of Liege, Department of Abdominal Surgery and Transplantation, Liege, Belgium
| | - Marie-Pierre Hayette
- University Hospital of Liege, Department of Clinical Microbiology - Belgian National reference laboratory for Echinococcosis, Center for Interdisciplinary Research on Medicines (CIRM), Liege, Belgium; EchinoLiege, University Hospital of Liege (CHU-ULg), Liege, Belgium
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10
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Karamon J, Samorek-Pieróg M, Bilska-Zając E, Korpysa-Dzirba W, Sroka J, Bełcik A, Zdybel J, Cencek T. Echinococcus multilocularis genetic diversity based on isolates from pigs confirmed the characteristic haplotype distribution and the presence of the Asian-like haplotype in Central Europe. J Vet Res 2023; 67:567-574. [PMID: 38130462 PMCID: PMC10730556 DOI: 10.2478/jvetres-2023-0056] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 10/04/2023] [Indexed: 12/23/2023] Open
Abstract
Introduction The aim of the study was to determine the genetic diversity of Echinococcus multilocularis in pigs in highly endemic areas in Poland, as well as to attempt to confirm the occurrence and geographical distribution of haplotypes characteristic for these areas, which were previously described on the basis of examination of adult tapeworms isolated from foxes. Material and Methods Twenty samples of E. multilocularis larval forms were obtained from pigs' livers in four provinces of Poland. Genetic analyses were conducted on sequences of two mitochondrial genes: cox1 and nad2. Results Seven haplotypes were found for the cox1 gene (OQ874673-OQ874679) and four haplotypes for nad2 (OQ884981-OQ884984). They corresponded to the haplotypes described earlier in foxes in Poland (some of them differing only in one nucleotide). The analysis showed the presence of the Asian-like haplotype in both the cox1 and nad2 genes. The remaining haplotypes were grouped in the European clade. The geographical distribution of haplotypes identified in the pig samples was noticed to bear a similarity to the distribution of haplotypes previously isolated from foxes in the same regions. Conclusion The characteristic geographical distribution of E. multilocularis haplotypes in Central Europe (including the presence of the Asian-like haplotype) previously described in the population of definitive hosts (foxes) has now been confirmed by the analysis of samples from non-specific intermediate hosts (pigs).
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Affiliation(s)
- Jacek Karamon
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
| | - Małgorzata Samorek-Pieróg
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
| | - Ewa Bilska-Zając
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
| | - Weronika Korpysa-Dzirba
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
| | - Jacek Sroka
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
| | - Aneta Bełcik
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
| | - Jolanta Zdybel
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
| | - Tomasz Cencek
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, 24-100Puławy, Poland
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11
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Gładysz P, Lass A. Detection of Asian genetic components in autochthonous human Echinococcus multilocularis infections from endemic Warmia-Masuria (north-eastern Poland). One Health 2023; 17:100623. [PMID: 38024287 PMCID: PMC10665143 DOI: 10.1016/j.onehlt.2023.100623] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 08/11/2023] [Accepted: 08/23/2023] [Indexed: 12/01/2023] Open
Abstract
Alveolar echinococcosis is a life-threatening zoonotic disease caused by the larval stage of the cestode Echinococcus multilocularis. People are aberrant intermediate hosts accidentally infected with the parasite eggs via faecal-oral route, usually by the consumption of unwashed fruit and vegetable or direct contact with definitive hosts. The recently reported presence of Asian admixture in E. multilocularis tapeworms from Polish red foxes prompted the question of metacestode descent in the human population. In this study, a Maximum Likelihood tree based on partial sequences of E. multilocularis mitochondrial genes cox1, cob, and nad2 coupled with a hierarchical clustering analysis of microsatellite EmsB profiles and supplemented by Sammon's nonlinear mapping with k-means clustering revealed Asian genetic components, to date associated only with the sylvatic cycle, in two autochthonous samples from alveolar echinococcosis patients living in endemic Warmia-Masuria, north-eastern Poland. The red fox is the most likely source of contamination in the environment shared by people and wildlife that led to these infections. Our results confirm that Asian genetic variants participate in the synanthropic cycle in north-eastern Poland and indicate that they may be present in the human population in other areas where Asian genetic variants were detected in red foxes.
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Affiliation(s)
- Paweł Gładysz
- Department of Forensic Medicine, Medical University of Gdańsk, Dębowa 23, 80-204 Gdańsk, Poland
- Department of Tropical Medicine and Parasitology, Institute of Maritime and Tropical Medicine, Medical University of Gdańsk, Powstania Styczniowego 9B, 81-519 Gdynia, Poland
| | - Anna Lass
- Department of Tropical Medicine and Parasitology, Institute of Maritime and Tropical Medicine, Medical University of Gdańsk, Powstania Styczniowego 9B, 81-519 Gdynia, Poland
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12
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Bohard L, Lallemand S, Borne R, Courquet S, Bresson-Hadni S, Richou C, Millon L, Bellanger AP, Knapp J. Complete mitochondrial exploration of Echinococcus multilocularis from French alveolar echinococcosis patients. Int J Parasitol 2023:S0020-7519(23)00076-0. [PMID: 37148987 DOI: 10.1016/j.ijpara.2023.03.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Revised: 03/14/2023] [Accepted: 03/20/2023] [Indexed: 05/08/2023]
Abstract
Alveolar echinococcosis (AE) is a parasitosis that is expanding worldwide, including in Europe. The development of genotypic markers is essential to follow its spatiotemporal evolution. Sequencing of the commonly used mitochondrial genes cob, cox1, and nad2 shows low discriminatory power, and analysis of the microsatellite marker EmsB does not allow nucleotide sequence analysis. We aimed to develop a new method for the genotyping of Echinococcus multilocularis based on whole mitochondrial genome (mitogenome) sequencing, to determine the genetic diversity among 30 human visceral samples from French patients, and compare this method with those currently in use. Sequencing of the whole mitochondrial genome was carried out after amplification by PCR, using one uniplex and two multiplex reactions to cover the 13,738 bp of the mitogenome, combined with Illumina technology. Thirty complete mitogenome sequences were obtained from AE lesions. One showed strong identity with Asian genotypes (99.98% identity) in a patient who had travelled to China. The other 29 mitogenomes could be differentiated into 13 haplotypes, showing higher haplotype and nucleotide diversity than when using the cob, cox1, and nad2 gene sequences alone. The mitochondrial genotyping data and EmsB profiles did not overlap, probably because one method uses the mitochondrial genome and the other the nuclear genome. The pairwise fixation index (Fst) value between individuals living inside and those living outside the endemic area was high (Fst = 0.222, P = 0.002). This is consistent with the hypothesis of an expansion from historical endemic areas to peripheral regions.
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Affiliation(s)
- Louis Bohard
- Department of Infectious Disease, University Hospital of Besançon, 3 boulevard A. Fleming, 25030 Besançon, France
| | - Séverine Lallemand
- UMR CNRS 6249 Chrono-environnement Laboratory, University of Franche-Comté, 16 Route de Gray, 25030 Besançon, France
| | - Romain Borne
- UMR CNRS 6249 Chrono-environnement Laboratory, University of Franche-Comté, 16 Route de Gray, 25030 Besançon, France
| | - Sandra Courquet
- UMR CNRS 6249 Chrono-environnement Laboratory, University of Franche-Comté, 16 Route de Gray, 25030 Besançon, France; Department of Parasitology-Mycology, Reference National Center for Echinococcosis, University Hospital of Besançon, 3 boulevard A. Fleming, 25030 Besançon, France
| | - Solange Bresson-Hadni
- UMR CNRS 6249 Chrono-environnement Laboratory, University of Franche-Comté, 16 Route de Gray, 25030 Besançon, France; Department of Parasitology-Mycology, Reference National Center for Echinococcosis, University Hospital of Besançon, 3 boulevard A. Fleming, 25030 Besançon, France
| | - Carine Richou
- Department of Hepatology, University Hospital of Besançon, 3 boulevard A. Fleming, Besançon France
| | - Laurence Millon
- UMR CNRS 6249 Chrono-environnement Laboratory, University of Franche-Comté, 16 Route de Gray, 25030 Besançon, France; Department of Parasitology-Mycology, Reference National Center for Echinococcosis, University Hospital of Besançon, 3 boulevard A. Fleming, 25030 Besançon, France
| | - Anne-Pauline Bellanger
- UMR CNRS 6249 Chrono-environnement Laboratory, University of Franche-Comté, 16 Route de Gray, 25030 Besançon, France; Department of Parasitology-Mycology, Reference National Center for Echinococcosis, University Hospital of Besançon, 3 boulevard A. Fleming, 25030 Besançon, France
| | - Jenny Knapp
- UMR CNRS 6249 Chrono-environnement Laboratory, University of Franche-Comté, 16 Route de Gray, 25030 Besançon, France; Department of Parasitology-Mycology, Reference National Center for Echinococcosis, University Hospital of Besançon, 3 boulevard A. Fleming, 25030 Besançon, France.
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13
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Santa MA, Umhang G, Klein C, Grant DM, Ruckstuhl KE, Musiani M, Gilleard JS, Massolo A. It's a small world for parasites: evidence supporting the North American invasion of European Echinococcus multilocularis. Proc Biol Sci 2023; 290:20230128. [PMID: 36883278 PMCID: PMC9993045 DOI: 10.1098/rspb.2023.0128] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023] Open
Abstract
Echinococcus multilocularis (Em), the causative agent of human alveolar echinococcosis (AE), is present in the Holarctic region, and several genetic variants deem to have differential infectivity and pathogenicity. An unprecedented outbreak of human AE cases in Western Canada infected with a European-like strain circulating in wild hosts warranted assessment of whether this strain was derived from a recent invasion or was endemic but undetected. Using nuclear and mitochondrial markers, we investigated the genetic diversity of Em in wild coyotes and red foxes from Western Canada, compared the genetic variants identified to global isolates and assessed their spatial distribution to infer possible invasion dynamics. Genetic variants from Western Canada were closely related to the original European clade, with lesser genetic diversity than that expected for a long-established strain and spatial genetic discontinuities within the study area, supporting the hypothesis of a relatively recent invasion with various founder events.
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Affiliation(s)
- Maria A. Santa
- Department of Biological Sciences, Faculty of Science, University of Calgary, Calgary, Alberta, Canada
| | - Gerald Umhang
- Nancy Laboratory for Rabies and Wildlife, National Reference Laboratory for Echinococcus spp., Wildlife Surveillance and Eco-epidemiology Unit, ANSES, Technopôle Agricole et Vétérinaire, Malzéville, France
| | - Claudia Klein
- Department of Clinical and Veterinary Clinical Sciences, Faculty of Veterinary Medicine, University of Calgary, Calgary, Alberta, Canada
- Friedrich-Loeffler-Institut, Bundesforschungsinstitut für Tiergesundheit, Federal Research Institute for Animal Health, Neustadt, Germany
| | - Danielle M. Grant
- Department of Clinical and Veterinary Clinical Sciences, Faculty of Veterinary Medicine, University of Calgary, Calgary, Alberta, Canada
- NORCE Climate, NORCE Norwegian Research Centre, Bjerknes Centre for Climate Research, Bergen, Norway
| | - Kathreen E. Ruckstuhl
- Department of Biological Sciences, Faculty of Science, University of Calgary, Calgary, Alberta, Canada
| | - Marco Musiani
- Department of Biological Sciences, Faculty of Science, University of Calgary, Calgary, Alberta, Canada
- Dipartimento di Scienze Biologiche, Geologiche e Ambientali (BiGeA), University of Bologna, Italy
| | - John S. Gilleard
- Department of Comparative Biology & Experimental Medicine, Host-Parasite Interactions (HPI) program, Faculty of Veterinary Medicine, University of Calgary, Calgary, Alberta, Canada
| | - Alessandro Massolo
- Ethology Unit, Department of Biology, University of Pisa, Pisa, Italy
- UMR CNRS 6249 Chrono-environnement, Université Bourgogne Franche-Comté, Besançon, France
- Faculty of Veterinary Medicine, University of Calgary, Calgary, Alberta, Canada
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14
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Umhang G, Richomme C, Caillot C, Bastid V, Boucher JM, Moyen JL, Novella C, Richoux B, Davoust B, Boué F. Towards delimitation of the Echinococcus multilocularis parasite's southernmost range in France. Vet Parasitol Reg Stud Reports 2022; 30:100724. [PMID: 35431062 DOI: 10.1016/j.vprsr.2022.100724] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2021] [Revised: 03/01/2022] [Accepted: 03/21/2022] [Indexed: 06/14/2023]
Abstract
Alveolar echinococcosis is a severe, potentially fatal, parasitic disease caused by ingestion of microscopic eggs of Echinococcus multilocularis. The lifecycle of the parasite is essentially sylvatic, and based on a prey-predator relationship between red foxes and small rodents. A westward expansion from the eastern historical focus has been reported in France, though the parasite has also been detected in the southern Alps. While the focus in the Auvergne region (central France) was described in the 1980s, the southern delimitation of the actual endemic area, especially in the south, was unknown in the absence of dedicated surveys. Red fox samples were collected from 2013 to 2020 in the framework of other transversal epidemiological studies in five sampling areas from southwestern and southeastern France. One hundred and seven intestines were analysed by SSCT, and 221 faecal samples from intestines were analysed by copro-qPCR. None of the 328 foxes exhibited E. multilocularis worms or DNA. Although the presence of E. multilocularis cannot be totally excluded in the departments from the study areas, the sample size tested argues for an absence of the parasite in these studied areas, which is in accordance with the currently known endemic situation in France. These new data are helpful in determining the southernmost limit of E. multilocularis distribution in France. The warm, dry Mediterranean climate in the southeastern areas is less favourable to the transmission of E. multilocularis and especially to the survival of eggs in the environment than the climate in the French Alps or Liguria (Italy) climate where the parasite is present. The intermediate area between the southwestern study areas and the historical focus of Auvergne, which is separated by around 150 km, will be investigated in the coming years. Moreover, an ongoing national surveillance programme on E. multilocularis in foxes is targeting French departements along the edge of the known endemic area both in the southeast and southwest. The data produced will supplement the results of this study, thus greatly helping to define the current distribution of E. multilocularis in France and to target prevention measures to reduce human exposure.
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Affiliation(s)
- Gérald Umhang
- Anses, Rabies and Wildlife Laboratory, National Reference Laboratory for Echinococcus spp., Malzéville, France.
| | - Céline Richomme
- Anses, Rabies and Wildlife Laboratory, National Reference Laboratory for Echinococcus spp., Malzéville, France
| | - Christophe Caillot
- Anses, Rabies and Wildlife Laboratory, National Reference Laboratory for Echinococcus spp., Malzéville, France
| | - Vanessa Bastid
- Anses, Rabies and Wildlife Laboratory, National Reference Laboratory for Echinococcus spp., Malzéville, France
| | - Jean-Marc Boucher
- Anses, Rabies and Wildlife Laboratory, National Reference Laboratory for Echinococcus spp., Malzéville, France
| | - Jean-Louis Moyen
- Laboratoire Départemental d'Analyse et de Recherche de la Dordogne (LDAR24), 24660 Coulounieix-Chamiers, France
| | | | - Bruno Richoux
- Laboratoire départemental d'analyse de la Charente (LDA16), France
| | - Bernard Davoust
- Animal Epidemiology Expert Group, French Military Health Service, Tours, France; IHU Méditerranée Infection, Marseille, France
| | - Franck Boué
- Anses, Rabies and Wildlife Laboratory, National Reference Laboratory for Echinococcus spp., Malzéville, France
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15
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Manciulli T, Vola A, Brunetti E. Echinococcus. ENCYCLOPEDIA OF INFECTION AND IMMUNITY 2022:475-491. [DOI: 10.1016/b978-0-12-818731-9.00236-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2025]
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16
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Tamarozzi F, Manciulli T, Brunetti E, Vuitton DA. Echinococcosis. HELMINTH INFECTIONS AND THEIR IMPACT ON GLOBAL PUBLIC HEALTH 2022:257-312. [DOI: 10.1007/978-3-031-00303-5_8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2025]
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17
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Herzig M, Maksimov P, Staubach C, Romig T, Knapp J, Gottstein B, Conraths FJ. Red foxes harbor two genetically distinct, spatially separated Echinococcus multilocularis clusters in Brandenburg, Germany. Parasit Vectors 2021; 14:535. [PMID: 34649615 PMCID: PMC8518320 DOI: 10.1186/s13071-021-05038-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2021] [Accepted: 09/24/2021] [Indexed: 12/28/2022] Open
Abstract
Background Alveolar echinococcosis (AE) is a clinically serious zoonosis caused by the fox tapeworm Echinococcus multilocularis. We studied the diversity and the distribution of genotypes of E. multilocularis isolated from foxes in Brandenburg, Germany, and in comparison to a hunting ground in North Rhine-Westphalia. Methods Echinococcus multilocularis specimens from 101 foxes, 91 derived from Brandenburg and 10 derived from North Rhine-Westphalia, were examined. To detect potential mixed infections with different genotypes of E. multilocularis, five worms per fox were analyzed. For genotyping, three mitochondrial markers, namely cytochrome c oxidase subunit 1 (Cox1), NADH dehydrogenase subunit 1 (Nad1), and ATP synthase subunit 6 (ATP6), and the nuclear microsatellite marker EmsB were used. To identify nucleotide polymorphisms, the mitochondrial markers were sequenced and the data were compared, including with published sequences from other regions. EmsB fragment length profiles were determined and confirmed by Kohonen network analysis and grouping of Sammon’s nonlinear mapping with k-means clustering. The spatial distribution of genotypes was analyzed by SaTScan for the EmsB profiles found in Brandenburg. Results With both the mitochondrial makers and the EmsB microsatellite fragment length profile analyses, mixed infections with different E. multilocularis genotypes were detected in foxes from Brandenburg and North Rhine-Westphalia. Genotyping using the mitochondrial markers showed that the examined parasite specimens belong to the European haplotype of E. multilocularis, but a detailed spatial analysis was not possible due to the limited heterogeneity of these markers in the parasite population. Four (D, E, G, and H) out of the five EmsB profiles described in Europe so far were detected in the samples from Brandenburg and North Rhine-Westphalia. The EmsB profile G was the most common. A spatial cluster of the E. multilocularis genotype with the EmsB profile G was found in northeastern Brandenburg, and a cluster of profile D was found in southern parts of this state. Conclusions Genotyping of E. multilocularis showed that individual foxes may harbor different genotypes of the parasite. EmsB profiles allowed the identification of spatial clusters, which may help in understanding the distribution and spread of the infection in wildlife, and in relatively small endemic areas. Graphical Abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1186/s13071-021-05038-0.
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Affiliation(s)
- Mandy Herzig
- Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Südufer 10, 17493, Greifswald-Insel Riems, Germany
| | - Pavlo Maksimov
- Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Südufer 10, 17493, Greifswald-Insel Riems, Germany
| | - Christoph Staubach
- Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Südufer 10, 17493, Greifswald-Insel Riems, Germany
| | - Thomas Romig
- Universität Hohenheim, Institut Für Biologie, Fachgebiet Parasitologie, Emil-Wolff-Straße 34, 70599, Stuttgart, Germany
| | - Jenny Knapp
- UMR CNRS 6249 Laboratoire Chrono-Environnement, Université Bourgogne Franche-Comté, 16 Route de Gray, 25030, Besançon, France.,Department of Parasitology-Mycology, National Reference Centre for Echinococcoses, University Hospital of Besançon, 25030, Besançon, France
| | - Bruno Gottstein
- Institute for Infectious Diseases, Faculty of Medicine, University of Berne, 3001, Berne, Switzerland
| | - Franz J Conraths
- Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
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18
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Miljević M, Lalošević D, Simin V, Blagojević J, Čabrilo B, Čabrilo OB. Intestinal helminth infections in the golden jackal (Canis aureus L.) from Vojvodina: Hotspot area of multilocular echinococcosis in Serbia. Acta Vet Hung 2021; 69:274-281. [PMID: 34506299 DOI: 10.1556/004.2021.00030] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2021] [Accepted: 07/15/2021] [Indexed: 11/19/2022]
Abstract
In the present study, 64 golden jackals were examined for intestinal helminths in three regions of Vojvodina, Serbia. Among the examined jackals 57.8% were infected with at least one parasite species. Using the intestinal scraping technique (SCT), eight species of intestinal helminths were found: Alaria alata (7.8%), Toxascaris leonina (9.4%), Toxocara canis (4.7%), Uncinaria stenocephala (20.3%), Echinococcus multilocularis (14.1%), Mesocestoides sp. (42.2%), Taenia pisiformis, and Taenia hydatigena (the overall prevalence of Taenia infection was 6.3%). To the best of our knowledge, this is the first report of T. leonina in jackals from Serbia. In comparison with the SCT results, coprological tests were less sensitive and specific for parasite identification, as only two nematode species (T. leonina and T. canis) as well as ancylostomatid and taeniid eggs were identified. The total prevalence of intestinal helminths was higher in males (71.9% males, 45% females), but the difference was not statistically significant (χ 2 = 3.76; P = 0.052). Co-infection with two species of intestinal helminths was found in 35% of the examined golden jackal individuals, three-species co-infection was demonstrated in 21.6%, whereas four-species co-infection was detected in 2.7% of the golden jackals examined. Echinococcus multilocularis has previously been recorded in jackals and foxes in Serbia, but only in Vojvodina. Our results corroborate the findings of previous studies, and indicate that the Vojvodina Province, more specifically the Srem region, is probably a high-risk area for E. multilocularis transmission to humans.
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Affiliation(s)
- Milan Miljević
- 1 Department of Genetic Research, Institute for Biological Research ‘Siniša Stanković’, National Institute of Republic of Serbia, University of Belgrade, Bulevar despota Stefana 142, 11060 Belgrade, Serbia
| | - Dušan Lalošević
- 2 Department for Microbiological and Other Diagnostics, Pasteur Institute Novi Sad, Novi Sad, Serbia
| | - Verica Simin
- 2 Department for Microbiological and Other Diagnostics, Pasteur Institute Novi Sad, Novi Sad, Serbia
| | - Jelena Blagojević
- 1 Department of Genetic Research, Institute for Biological Research ‘Siniša Stanković’, National Institute of Republic of Serbia, University of Belgrade, Bulevar despota Stefana 142, 11060 Belgrade, Serbia
| | - Borislav Čabrilo
- 3 Department of Biology and Ecology, Faculty of Science, University of Novi Sad, Novi Sad, Serbia
| | - Olivera Bjelić Čabrilo
- 3 Department of Biology and Ecology, Faculty of Science, University of Novi Sad, Novi Sad, Serbia
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