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For: Holekamp TF, Turaga D, Holy TE. Fast Three-Dimensional Fluorescence Imaging of Activity in Neural Populations by Objective-Coupled Planar Illumination Microscopy. Neuron 2008;57:661-72. [DOI: 10.1016/j.neuron.2008.01.011] [Citation(s) in RCA: 270] [Impact Index Per Article: 15.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2007] [Revised: 09/26/2007] [Accepted: 01/07/2008] [Indexed: 11/23/2022]
Number Cited by Other Article(s)
1
Tan Q, Wu H, Liu Y, Chen Q, Zuo C. Advances in Axial Resolution Strategies for Super-Resolution Imaging Systems. SMALL METHODS 2025:e2401926. [PMID: 39981781 DOI: 10.1002/smtd.202401926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2024] [Revised: 12/25/2024] [Indexed: 02/22/2025]
2
Ruan X, Mueller M, Liu G, Görlitz F, Fu TM, Milkie DE, Lillvis JL, Kuhn A, Gan Chong J, Hong JL, Herr CYA, Hercule W, Nienhaus M, Killilea AN, Betzig E, Upadhyayula S. Image processing tools for petabyte-scale light sheet microscopy data. Nat Methods 2024;21:2342-2352. [PMID: 39420143 PMCID: PMC11621031 DOI: 10.1038/s41592-024-02475-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Accepted: 09/16/2024] [Indexed: 10/19/2024]
3
Neyhart E, Zhou N, Munn BR, Law RG, Smith C, Mridha ZH, Blanco FA, Li G, Li Y, Hu M, McGinley MJ, Shine JM, Reimer J. Cortical acetylcholine dynamics are predicted by cholinergic axon activity and behavior state. Cell Rep 2024;43:114808. [PMID: 39383037 PMCID: PMC11755675 DOI: 10.1016/j.celrep.2024.114808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 07/18/2024] [Accepted: 09/13/2024] [Indexed: 10/11/2024]  Open
4
Kumar P, Mondal PP. Multicolor iLIFE (m-iLIFE) volume cytometry for high-throughput imaging of multiple organelles. Sci Rep 2024;14:23798. [PMID: 39394224 PMCID: PMC11470118 DOI: 10.1038/s41598-024-73667-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2024] [Accepted: 09/19/2024] [Indexed: 10/13/2024]  Open
5
Zhu E, Li YR, Margolis S, Wang J, Wang K, Zhang Y, Wang S, Park J, Zheng C, Yang L, Chu A, Zhang Y, Gao L, Hsiai TK. Frontiers in artificial intelligence-directed light-sheet microscopy for uncovering biological phenomena and multi-organ imaging. VIEW 2024;5:20230087. [PMID: 39478956 PMCID: PMC11521201 DOI: 10.1002/viw.20230087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 07/18/2024] [Indexed: 11/02/2024]  Open
6
Neyhart E, Zhou N, Munn BR, Law RG, Smith C, Mridha ZH, Blanco FA, Li G, Li Y, McGinley MJ, Shine JM, Reimer J. Cortical acetylcholine dynamics are predicted by cholinergic axon activity and behavior state. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.11.14.567116. [PMID: 38352527 PMCID: PMC10862699 DOI: 10.1101/2023.11.14.567116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/19/2024]
7
Lee SH, Son HJ. Second Wave, Late-Stage Neuroinflammation in Cleared Brains of Aged 5xFAD Alzheimer's Mice Detected by Macrolaser Light Sheet Microscopy Imaging. Int J Mol Sci 2023;24:17058. [PMID: 38069392 PMCID: PMC10707588 DOI: 10.3390/ijms242317058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Revised: 11/27/2023] [Accepted: 11/29/2023] [Indexed: 12/18/2023]  Open
8
Liang X, Holy TE, Taghert PH. Polyphasic circadian neural circuits drive differential activities in multiple downstream rhythmic centers. Curr Biol 2023;33:351-363.e3. [PMID: 36610393 PMCID: PMC9877191 DOI: 10.1016/j.cub.2022.12.025] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 12/05/2022] [Accepted: 12/09/2022] [Indexed: 01/08/2023]
9
Wang J, Karbasi P, Wang L, Meeks JP. A Layered, Hybrid Machine Learning Analytic Workflow for Mouse Risk Assessment Behavior. eNeuro 2023;10:ENEURO.0335-22.2022. [PMID: 36564214 PMCID: PMC9833056 DOI: 10.1523/eneuro.0335-22.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 12/06/2022] [Accepted: 12/15/2022] [Indexed: 12/25/2022]  Open
10
Lightsheet optical tweezer (LOT) for optical manipulation of microscopic particles and live cells. Sci Rep 2022;12:10229. [PMID: 35715431 PMCID: PMC9205896 DOI: 10.1038/s41598-022-13095-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Accepted: 05/20/2022] [Indexed: 11/09/2022]  Open
11
Liang X, Holy TE, Taghert PH. Circadian pacemaker neurons display cophasic rhythms in basal calcium level and in fast calcium fluctuations. Proc Natl Acad Sci U S A 2022;119:e2109969119. [PMID: 35446620 PMCID: PMC9173584 DOI: 10.1073/pnas.2109969119] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2021] [Accepted: 03/17/2022] [Indexed: 12/02/2022]  Open
12
Engelbrecht L, Ollewagen T, de Swardt D. Advances in fluorescence microscopy can reveal important new aspects of tissue regeneration. Biochimie 2022;196:194-202. [DOI: 10.1016/j.biochi.2022.02.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Revised: 01/19/2022] [Accepted: 02/02/2022] [Indexed: 12/12/2022]
13
Gagliano G, Nelson T, Saliba N, Vargas-Hernández S, Gustavsson AK. Light Sheet Illumination for 3D Single-Molecule Super-Resolution Imaging of Neuronal Synapses. Front Synaptic Neurosci 2021;13:761530. [PMID: 34899261 PMCID: PMC8651567 DOI: 10.3389/fnsyn.2021.761530] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Accepted: 10/27/2021] [Indexed: 01/02/2023]  Open
14
Fluorescence based rapid optical volume screening system (OVSS) for interrogating multicellular organisms. Sci Rep 2021;11:7616. [PMID: 33828140 PMCID: PMC8027194 DOI: 10.1038/s41598-021-86951-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 03/22/2021] [Indexed: 11/08/2022]  Open
15
Wang F, Ma Z, Zhong Y, Salazar F, Xu C, Ren F, Qu L, Wu AM, Dai H. In vivo NIR-II structured-illumination light-sheet microscopy. Proc Natl Acad Sci U S A 2021;118:e2023888118. [PMID: 33526701 PMCID: PMC8017937 DOI: 10.1073/pnas.2023888118] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]  Open
16
Daria VR, Castañares ML, Bachor HA. Spatio-temporal parameters for optical probing of neuronal activity. Biophys Rev 2021;13:13-33. [PMID: 33747244 PMCID: PMC7930150 DOI: 10.1007/s12551-021-00780-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2020] [Accepted: 01/01/2021] [Indexed: 12/28/2022]  Open
17
Zhang Z, Cong L, Bai L, Wang K. Light-field microscopy for fast volumetric brain imaging. J Neurosci Methods 2021;352:109083. [PMID: 33484746 DOI: 10.1016/j.jneumeth.2021.109083] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Revised: 12/23/2020] [Accepted: 01/14/2021] [Indexed: 01/06/2023]
18
Zhao F, Zhu L, Fang C, Yu T, Zhu D, Fei P. Deep-learning super-resolution light-sheet add-on microscopy (Deep-SLAM) for easy isotropic volumetric imaging of large biological specimens. BIOMEDICAL OPTICS EXPRESS 2020;11:7273-7285. [PMID: 33408995 PMCID: PMC7747920 DOI: 10.1364/boe.409732] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Revised: 11/06/2020] [Accepted: 11/17/2020] [Indexed: 06/12/2023]
19
Tang Q, Tsytsarev V, Yan F, Wang C, Erzurumlu RS, Chen Y. In vivo voltage-sensitive dye imaging of mouse cortical activity with mesoscopic optical tomography. NEUROPHOTONICS 2020;7:041402. [PMID: 33274250 PMCID: PMC7708784 DOI: 10.1117/1.nph.7.4.041402] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2020] [Accepted: 11/11/2020] [Indexed: 05/11/2023]
20
Imaging volumetric dynamics at high speed in mouse and zebrafish brain with confocal light field microscopy. Nat Biotechnol 2020;39:74-83. [PMID: 32778840 DOI: 10.1038/s41587-020-0628-7] [Citation(s) in RCA: 69] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2020] [Accepted: 07/08/2020] [Indexed: 12/12/2022]
21
Tubiana J, Wolf S, Panier T, Debregeas G. Blind deconvolution for spike inference from fluorescence recordings. J Neurosci Methods 2020;342:108763. [PMID: 32479972 DOI: 10.1016/j.jneumeth.2020.108763] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Revised: 05/05/2020] [Accepted: 05/06/2020] [Indexed: 10/24/2022]
22
Sparks H, Dvinskikh L, Firth JM, Francis AJ, Harding SE, Paterson C, MacLeod KT, Dunsby C. Development a flexible light-sheet fluorescence microscope for high-speed 3D imaging of calcium dynamics and 3D imaging of cellular microstructure. JOURNAL OF BIOPHOTONICS 2020;13:e201960239. [PMID: 32101366 DOI: 10.1002/jbio.201960239] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 02/07/2020] [Accepted: 02/22/2020] [Indexed: 06/10/2023]
23
Zhao F, Yang Y, Li Y, Jiang H, Xie X, Yu T, Wang X, Liu Q, Zhang H, Jia H, Liu S, Zhen M, Zhu D, Gao S, Fei P. Efficient and cost-effective 3D cellular imaging by sub-voxel-resolving light-sheet add-on microscopy. JOURNAL OF BIOPHOTONICS 2020;13:e201960243. [PMID: 32077244 DOI: 10.1002/jbio.201960243] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2019] [Revised: 02/01/2020] [Accepted: 02/11/2020] [Indexed: 06/10/2023]
24
Kumar M, Kozorovitskiy Y. Tilt (in)variant lateral scan in oblique plane microscopy: a geometrical optics approach. BIOMEDICAL OPTICS EXPRESS 2020;11:3346-3359. [PMID: 32637259 PMCID: PMC7316005 DOI: 10.1364/boe.389654] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Revised: 05/15/2020] [Accepted: 05/18/2020] [Indexed: 06/11/2023]
25
Ueda HR, Dodt HU, Osten P, Economo MN, Chandrashekar J, Keller PJ. Whole-Brain Profiling of Cells and Circuits in Mammals by Tissue Clearing and Light-Sheet Microscopy. Neuron 2020;106:369-387. [PMID: 32380050 PMCID: PMC7213014 DOI: 10.1016/j.neuron.2020.03.004] [Citation(s) in RCA: 140] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2019] [Revised: 01/11/2020] [Accepted: 03/04/2020] [Indexed: 01/12/2023]
26
Wong WM, Cao J, Zhang X, Doyle WI, Mercado LL, Gautron L, Meeks JP. Physiology-forward identification of bile acid-sensitive vomeronasal receptors. SCIENCE ADVANCES 2020;6:eaaz6868. [PMID: 32523992 PMCID: PMC7259934 DOI: 10.1126/sciadv.aaz6868] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2019] [Accepted: 03/20/2020] [Indexed: 06/11/2023]
27
Ryan TM, Hinojosa AJ, Vroman R, Papasavvas C, Lagnado L. Correction of z-motion artefacts to allow population imaging of synaptic activity in behaving mice. J Physiol 2020;598:1809-1827. [PMID: 32020615 PMCID: PMC7318612 DOI: 10.1113/jp278957] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Accepted: 01/24/2020] [Indexed: 11/08/2022]  Open
28
Turaga D, Matthys OB, Hookway TA, Joy DA, Calvert M, McDevitt TC. Single-Cell Determination of Cardiac Microtissue Structure and Function Using Light Sheet Microscopy. Tissue Eng Part C Methods 2020;26:207-215. [PMID: 32111148 DOI: 10.1089/ten.tec.2020.0020] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]  Open
29
Farouj Y, Karahanoglu FI, Van De Ville D. Deconvolution of Sustained Neural Activity From Large-Scale Calcium Imaging Data. IEEE TRANSACTIONS ON MEDICAL IMAGING 2020;39:1094-1103. [PMID: 31545714 DOI: 10.1109/tmi.2019.2942765] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
30
Cheng Z, Sun S, Gan W, Cui M. Contrast gain through simple illumination control for wide-field fluorescence imaging of scattering samples. OPTICS EXPRESS 2020;28:2326-2336. [PMID: 32121925 PMCID: PMC7053499 DOI: 10.1364/oe.385319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Revised: 01/05/2020] [Accepted: 01/05/2020] [Indexed: 06/10/2023]
31
Lee D, Kume M, Holy TE. Sensory coding mechanisms revealed by optical tagging of physiologically defined neuronal types. Science 2019;366:1384-1389. [PMID: 31831669 PMCID: PMC7591936 DOI: 10.1126/science.aax8055] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2019] [Accepted: 10/25/2019] [Indexed: 01/27/2023]
32
Kozlov A, Nagoshi E. Decoding Drosophila circadian pacemaker circuit. CURRENT OPINION IN INSECT SCIENCE 2019;36:33-38. [PMID: 31376574 DOI: 10.1016/j.cois.2019.06.010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2019] [Revised: 05/22/2019] [Accepted: 06/24/2019] [Indexed: 06/10/2023]
33
Zhang T, Hernandez O, Chrapkiewicz R, Shai A, Wagner MJ, Zhang Y, Wu CH, Li JZ, Inoue M, Gong Y, Ahanonu B, Zeng H, Bito H, Schnitzer MJ. Kilohertz two-photon brain imaging in awake mice. Nat Methods 2019;16:1119-1122. [PMID: 31659327 PMCID: PMC9438750 DOI: 10.1038/s41592-019-0597-2] [Citation(s) in RCA: 61] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2016] [Revised: 07/25/2019] [Accepted: 09/11/2019] [Indexed: 02/03/2023]
34
Fast objective coupled planar illumination microscopy. Nat Commun 2019;10:4483. [PMID: 31578369 PMCID: PMC6775063 DOI: 10.1038/s41467-019-12340-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Accepted: 09/02/2019] [Indexed: 12/17/2022]  Open
35
Rakotoson I, Delhomme B, Djian P, Deeg A, Brunstein M, Seebacher C, Uhl R, Ricard C, Oheim M. Fast 3-D Imaging of Brain Organoids With a New Single-Objective Planar-Illumination Two-Photon Microscope. Front Neuroanat 2019;13:77. [PMID: 31481880 PMCID: PMC6710410 DOI: 10.3389/fnana.2019.00077] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2019] [Accepted: 07/16/2019] [Indexed: 12/28/2022]  Open
36
Hillman EMC, Voleti V, Li W, Yu H. Light-Sheet Microscopy in Neuroscience. Annu Rev Neurosci 2019;42:295-313. [PMID: 31283896 PMCID: PMC6800245 DOI: 10.1146/annurev-neuro-070918-050357] [Citation(s) in RCA: 111] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
37
Madrid-Wolff J, Forero-Shelton M. Protocol for the Design and Assembly of a Light Sheet Light Field Microscope. Methods Protoc 2019;2:mps2030056. [PMID: 31277384 PMCID: PMC6789549 DOI: 10.3390/mps2030056] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2019] [Revised: 06/29/2019] [Accepted: 07/01/2019] [Indexed: 11/23/2022]  Open
38
Oh J, Lee C, Kaang BK. Imaging and analysis of genetically encoded calcium indicators linking neural circuits and behaviors. THE KOREAN JOURNAL OF PHYSIOLOGY & PHARMACOLOGY : OFFICIAL JOURNAL OF THE KOREAN PHYSIOLOGICAL SOCIETY AND THE KOREAN SOCIETY OF PHARMACOLOGY 2019;23:237-249. [PMID: 31297008 PMCID: PMC6609268 DOI: 10.4196/kjpp.2019.23.4.237] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Revised: 05/29/2019] [Accepted: 05/29/2019] [Indexed: 12/21/2022]
39
Yang B, Chen X, Wang Y, Feng S, Pessino V, Stuurman N, Cho NH, Cheng KW, Lord SJ, Xu L, Xie D, Mullins RD, Leonetti MD, Huang B. Epi-illumination SPIM for volumetric imaging with high spatial-temporal resolution. Nat Methods 2019;16:501-504. [PMID: 31061492 PMCID: PMC6557432 DOI: 10.1038/s41592-019-0401-3] [Citation(s) in RCA: 88] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Accepted: 03/29/2019] [Indexed: 11/16/2022]
40
Liang X, Ho MCW, Zhang Y, Li Y, Wu MN, Holy TE, Taghert PH. Morning and Evening Circadian Pacemakers Independently Drive Premotor Centers via a Specific Dopamine Relay. Neuron 2019;102:843-857.e4. [PMID: 30981533 PMCID: PMC6533154 DOI: 10.1016/j.neuron.2019.03.028] [Citation(s) in RCA: 61] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2018] [Revised: 02/06/2019] [Accepted: 03/19/2019] [Indexed: 12/23/2022]
41
Corsetti S, Gunn-Moore F, Dholakia K. Light sheet fluorescence microscopy for neuroscience. J Neurosci Methods 2019;319:16-27. [DOI: 10.1016/j.jneumeth.2018.07.011] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2018] [Revised: 06/03/2018] [Accepted: 07/16/2018] [Indexed: 12/29/2022]
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Reder NP, Glaser AK, McCarty EF, Chen Y, True LD, Liu JTC. Open-Top Light-Sheet Microscopy Image Atlas of Prostate Core Needle Biopsies. Arch Pathol Lab Med 2019;143:1069-1075. [PMID: 30892067 DOI: 10.5858/arpa.2018-0466-oa] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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Jewell SW, Hocking TD, Fearnhead P, Witten DM. Fast nonconvex deconvolution of calcium imaging data. Biostatistics 2019;21:709-726. [PMID: 30753436 DOI: 10.1093/biostatistics/kxy083] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Revised: 12/03/2018] [Accepted: 12/10/2018] [Indexed: 11/14/2022]  Open
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Albert-Smet I, Marcos-Vidal A, Vaquero JJ, Desco M, Muñoz-Barrutia A, Ripoll J. Applications of Light-Sheet Microscopy in Microdevices. Front Neuroanat 2019;13:1. [PMID: 30760983 PMCID: PMC6362405 DOI: 10.3389/fnana.2019.00001] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2018] [Accepted: 01/09/2019] [Indexed: 11/23/2022]  Open
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Jewell S, Witten D. EXACT SPIKE TRAIN INFERENCE VIA ℓ0 OPTIMIZATION. Ann Appl Stat 2018;12:2457-2482. [PMID: 30627301 PMCID: PMC6322847 DOI: 10.1214/18-aoas1162] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Ding Y, Ma J, Langenbacher AD, Baek KI, Lee J, Chang CC, Hsu JJ, Kulkarni RP, Belperio J, Shi W, Ranjbarvaziri S, Ardehali R, Tintut Y, Demer LL, Chen JN, Fei P, Packard RRS, Hsiai TK. Multiscale light-sheet for rapid imaging of cardiopulmonary system. JCI Insight 2018;3:e121396. [PMID: 30135307 PMCID: PMC6141183 DOI: 10.1172/jci.insight.121396] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]  Open
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Sensory Adaptation to Chemical Cues by Vomeronasal Sensory Neurons. eNeuro 2018;5:eN-NWR-0223-18. [PMID: 30105301 PMCID: PMC6088365 DOI: 10.1523/eneuro.0223-18.2018] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Revised: 07/13/2018] [Accepted: 07/18/2018] [Indexed: 01/03/2023]  Open
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Chatterjee K, Pratiwi FW, Wu FCM, Chen P, Chen BC. Recent Progress in Light Sheet Microscopy for Biological Applications. APPLIED SPECTROSCOPY 2018;72:1137-1169. [PMID: 29926744 DOI: 10.1177/0003702818778851] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
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Weisenburger S, Vaziri A. A Guide to Emerging Technologies for Large-Scale and Whole-Brain Optical Imaging of Neuronal Activity. Annu Rev Neurosci 2018;41:431-452. [PMID: 29709208 PMCID: PMC6037565 DOI: 10.1146/annurev-neuro-072116-031458] [Citation(s) in RCA: 68] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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Holy TE. The Accessory Olfactory System: Innately Specialized or Microcosm of Mammalian Circuitry? Annu Rev Neurosci 2018;41:501-525. [DOI: 10.1146/annurev-neuro-080317-061916] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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