Reactive oxygen species in the world ocean and their impacts on marine ecosystems

Environmental stress responses to marine mucilage: Oxidative damage in economically important seafood from the Sea of Marmara

Marine mucilage, a gelatinous organic substance driven by nutrient enrichment and rising sea temperature, poses significant threats to marine biodiversity and fisheries. This study examines the oxidative stress responses in four seafood species: deep-water rose shrimp (Parapenaeus longirostris), common sole (Solea solea), European anchovy (Engraulis encrasicolus), and Atlantic horse mackerel (Trachurus trachurus) in Sea of Marmara, Türkiye, between September 2021 to April 2022. Biomarkers of oxidative stress-reduced glutathione (GSH), lipid peroxidation (LPO), and antioxidant enzyme activities (glutathione reductase, glutathione-S-transferase, and superoxide dismutase), were analyzed in muscle tissues to evaluate species-specific resilience to mucilage. Findings revealed distinct variations among species. Deep-water rose shrimp demonstrated the highest GSH level and lowest LPO level, indicating robust oxidative stress defense. In contrast, pelagic species, including European anchovy and Atlantic horse mackerel, exhibited decreased GSH and elevated LPO levels and variability antioxidant enzyme activities, reflecting greater sensitivity to environmental stress. During the marine mucilage, in addition to mucilage distribution, fluctuations in seawater temperature (between 7.4°C and 24.4°C), and physiological stress caused seasonal changes in various enzymatic activities of the fish species investigated in our study. These results highlight the risks posed by marine mucilage to seafood safety and the ecological balance of marine environments. The vulnerability of pelagic species, combined with their economic and nutritional importance, underscores the urgency of mitigation strategies. This study emphasizes the need for integrated "One Health" approaches to safeguard ecosystem health and food security in the region.

Insight into the characterization of dissolved organic matter in shallow lakes with different trophic states and their net photo-generation capacity of reactive oxygen species

Reactive oxygen species (ROS) are ubiquitous in the aquatic environment, and they are closely related to several biogeochemical processes. Dissolved organic matter (DOM) is one of the main photosensitizers involved in the formation of ROS and it also serves as a sink for ROS by involving in scavenging, quenching, and antioxidant reactions. The net effect of these processes depends on the concentration, source, and composition of the DOM. Current studies have mainly focused on the steady-state concentration of reactive oxygen species ([ROS]ss) produced by the total DOM in lakes with different trophic states and ignored the net photo-generation capacity of ROS ([ROS]DOM, the net steady concentration of ROS generated per unit mass of DOM), leading to a vague understanding of the photochemical properties of DOM in aquatic systems, especially in shallow lakes with different trophic states. In this study, the optical composition of DOM was determined with optical characterization, such as specific UV-Vis and excitation-emission matrices with fluorescence regional integration (FRI-EEMs), and its molecular characteristics were analyzed by Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS). The results revealed that DOM in lakes with different trophic states had mixed endogenous and exogenous characteristics, accompanied by an increasing trend in endogenous characteristics with the increasing trophic state of lakes. Spectroscopic probes were used to detect the steady-state concentration of ROS and further calculate the [ROS]DOM, such as [3DOM*]DOM, [•OH]DOM, [1O2]DOM and [O2.-]DOM. The results indicated that the [ROS]DOM in lakes with light-eutrophic states was significantly higher than that in lakes with moderate-eutrophic and hyper-eutrophic states, which indicated that the DOM in lower trophic state lakes has a higher net photo-generation capacity of ROS. Pearson analysis results showed that [3DOM*]DOM, [•OH]DOM, [1O2]DOM and [O2.-]DOM had a significant positive correlation with lignin/CRAMs-like, aromatic, and tannin compounds, as well as the fluorescence components, fulvic- and humic-like substances and the UV-Vis indicator: SUVA254 revealed that DOM with higher humification and aromaticity had a higher net photo-generation capacity of ROS in different trophic state lakes. In addition, the molecular uniqueness of the DOM was dominated by lignin/CRAMs-like and aromatic compounds, which were positively correlated with [ROS]DOM, in the following order: [3DOM*]DOM > [•OH]DOM > [1O2]DOM > [O2.-]DOM. This study emphasizes the importance of focusing on the source, composition, and net photo-generation capacity of ROS by DOM, which would help evaluate the photochemical potential and other behaviors of DOM in lakes with different trophic states and provide guidance for the risk assessment of DOM input from different sources.

DmdA-independent lag phase shortening in Phaeobacter inhibens bacteria under stress conditions

Bacteria can shorten their lag phase by using methyl groups from compounds like dimethylsulfoniopropionate (DMSP), which are incorporated into cellular components via the methionine cycle. However, the role of specific methionine synthases in this process is not fully understood. Using transcriptomics, genetics, and biochemical assays, we investigated methionine synthases involved in lag phase shortening in Phaeobacter inhibens. We focused on a cobalamin-dependent methionine synthase (MetH)-like complex encoded by three genes: a betaine-homocysteine S-methyltransferase (bmt), a cobalamin-binding protein (cbp), and an intermediate methyl carrier (PGA1_c16040). Expression profiling revealed transcriptional decoupling among these genes. Deleting bmt disrupted lag phase shortening in response to DMSP. Functional assays showed that Bmt can directly produce methionine from DMSP and betaine, independent of tetrahydrofolate (THF) or cobalamin. Interestingly, under stress conditions, lag phase shortening occurred even in the absence of dimethylsulfoniopropionate demethylase DmdA, the primary DMSP demethylase. Under osmotic and oxidative stress, bmt expression increased significantly in response to both DMSP and betaine, suggesting an alternative methylation route. This highlights the role of Bmt as both demethylase and a methionine synthase under stress, offering a cost-effective strategy for methyl group assimilation. Our findings reveal a novel stress-responsive pathway for methionine synthesis and demonstrate the role of Bmt in promoting bacterial adaptation by accelerating the lag phase.

The Barrier Properties of Biological Membranes Dictate How Cells Experience Oxidative Stress

Molecular oxygen, superoxide, and hydrogen peroxide are related oxidants that can each impair the growth of microorganisms. Strikingly, these species exhibit large differences in their abilities to cross biological membranes. This Perspective explains the basis of those differences, and it describes natural situations in which the permeability of membranes to oxidants determines the amount of stress that a bacterium experiences.

Sex-specific reproductive impairment in Pacific oysters (Magallana gigas) exposed to TiO2 NPs: A focus on gonadal status

Environmentally realistic concentrations of titanium dioxide nanoparticles (TiO2 NPs) are considered reprotoxic for marine bivalves. However, further investigation is needed to understand their impact on gonadal health, particularly concerning sex-specific responses. Thus, this study aimed to understand sex-based effects of TiO2 NPs environmentally realistic concentrations in the gonad of Pacific oysters (Magallana gigas). Oysters were exposed to 10 and 100 μg·L-1 of TiO2 NPs for 3 and 7 days. Morphological parameters (condition index, sex and gametogenic stage), energy-related responses (carbohydrates, lipids, proteins, and electron transport system (ETS) activity), digestive function (alpha-amylase activity), and oxidative stress profile (antioxidants and damage) were assessed to address gonadal status. The results revealed sex-specific responses based on duration and concentration. Females reflected a drop in carbohydrate levels after 3 days at 100 μg·L-1, suggesting mobilization of this energy reserve to counteract TiO2 NP effects, followed by recovery after 7 days. Males showed reduced metabolic activity after 3 days at 10 μg·L-1, marked by ETS depletion, independently of oxidative stress demonstrating a compensatory response to TiO2 NP exposure. After 7 days, both concentrations triggered male lipid peroxidation despite carbohydrate mobilization at 10 μg·L-1, indicating oxidative damage in testes. These findings revealed that TiO2 NPs are reprotoxic for male oysters at 10 μg·L-1, through oxidative stress pathways, while females reflected vulnerability to 100 μg·L-1. This study provides valuable insights into understanding TiO2 NP's reprotoxicity at environmental concentrations, highlighting gonads as a target for these NPs, and their potential risks to marine bivalves.

Functional characterization of peroxiredoxin 5 from yellowtail clownfish (Amphiprion clarkii): Immunological expression assessment, antioxidant activities, heavy metal detoxification, and nitrosative stress mitigation

Peroxiredoxin 5 (Prdx5) is the last recognized member of Prdx family. It is a unique, atypical, 2-Cys antioxidant enzyme, protecting cells from death caused by reactive oxygen species (ROS). In this study, the Prdx5 ortholog of Amphiprion clarkii (AcPrdx5) was identified and characterized to explore its specific structural features and functional properties. The open reading frame of AcPrdx5 is 573 bp long and encodes 190 amino acids containing a mitochondrial targeting sequence, thioredoxin domain, and two conserved cysteine residues responsible for antioxidant function. The predicted molecular weight and theoretical isoelectric point of AcPrdx5 are 20.3 kDa and 9.01, respectively. AcPrdx5 sequences were found to be highly conserved across the other orthologs from various organisms and it distinctively clustered within the fish Prdx5 subclade of the phylogenetic tree. The expression of AcPrdx5 was ubiquitously detected among twelve tested tissues, with the highest level in the brain. Furthermore, the mRNA levels of AcPrdx5 in the blood and head-kidney tissues were significantly (p < 0.05) upregulated following polyinosinic-polycytidylic acid (Poly I:C), lipopolysaccharide (LPS), and Vibrio harveyi immune challenge. A concentration-dependent antioxidant potential of recombinant AcPrdx5 was observed in insulin disulfide bond reduction, heavy metal detoxification, free radical and hydrogen peroxide (H2O2) scavenging assays. Additionally, AcPrdx5 overexpression in fathead minnow (FHM) cells upregulated the antioxidant-associated gene (Rrm1, MAPK, SOD2, and PRDX1) expression after H2O2 treatment, and promoted cell viability upon arsenic (As) exposure. In macrophages, AcPrdx5 overexpression effectively suppressed substantial nitric oxide production under lipopolysaccharide treatment. Collectively, our results suggest that AcPrdx5 may play roles in both antioxidant defense system and innate immune response against pathogenic invasions in A. clarkii.

Influence of temperature changes on oxidative stress and antioxidant defense system in the bay scallop, Argopecten irradians

In this study, we aimed to understand the effects of changes in temperature on biochemical and molecular responses associated with the antioxidant defense system in the bay scallop, Argopecten irradians. We measured the contents of H2O2 and malondialdehyde (MDA), as well as the activities of antioxidant enzymes (e.g., glutathione S-transferase [GST], superoxide dismutase [SOD], and catalase [CAT]), and the regulation of stress-related genes (e.g., GST, SOD, CAT, and heat shock protein 70 [HSP70]). In addition, total antioxidant capacity (TAC) was examined in scallops exposed to different temperatures. A. irradians showed high levels of H2O2 and MDA in response to acute thermal stress (48 and 72 h of exposure). Temperature changes also led to a significant increase in antioxidant enzyme activity and mRNA expression levels in A. irradians. Interestingly, the TAC increased in response to acute thermal stress (28 °C) for up to 12 h and decreased thereafter. The oxidative stress induced by high temperatures could not be alleviated by an increase in levels of antioxidant enzymes, such as GST, SOD, and CAT, resulting in high levels of H2O2 and MDA and low levels of TAC. In addition, significant changes (P < 0.05) in HSP70 levels were observed in response to changes in temperature, suggesting that HSP70 played an important role in the heat tolerance of A. irradians. In conclusion, A. irradians exhibits a greater degree of oxidative stress responses in high-temperature environments than that in low-temperature environments. Overall, these findings indicate that temperature changes lead to oxidative stress, resulting in cellular damage and activation of the antioxidant defense system in bay scallops. Further experiments are required to elucidate other antioxidants and fully understand the redox system in A. irradians.

A review on reactive oxygen species-induced mechanism pathways of pharmaceutical waste degradation: Acetaminophen as a drug waste model

Innately designed to induce physiological changes, pharmaceuticals are foreknowingly hazardous to the ecosystem. Advanced oxidation processes (AOPs) are recognized as a set of contemporary and highly efficient methods being used as a contrivance for the removal of pharmaceutical residues. Since reactive oxygen species (ROS) are formed in these processes to interact and contribute directly toward the oxidation of target contaminant(s), a profound insight regarding the mechanisms of ROS leading to the degradation of pharmaceuticals is fundamentally significant. The conceptualization of some specific reaction mechanisms allows the design of an effective and safe degradation process that can empirically reduce the environmental impact of the micropollutants. This review mainly deliberates the mechanistic reaction pathways for ROS-mediated degradation of pharmaceuticals often leading to complete mineralization, with a focus on acetaminophen as a drug waste model.

The substantial generation of photochemically produced reactive intermediates (PPRIs) in algae-type zones from one large shallow lake promoted the removal of organic pollutants

Photochemically produced reactive intermediates (PPRIs) are ubiquitously present in aquatic systems and hold significant importance in biogeochemical cycles. The photochemical reaction of dissolved organic matter (DOM), known as photosensitizers upon irradiation, is the main pathway for PPRIs generation. However, the PPRIs produced by algal-derived organic matter (ADOM) and their environmental effects remains elusive. This study confirmed that substantial PPRIs were generated by ADOM in the algal-derived areas. UV absorption spectra, fluorescence spectra and Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) were then indicated a significant correlation between the molecular weight of DOM and the quantum yield of PPRIs, with lower molecular weight of DOM exhibiting a higher potential for PPRIs generation. Orthogonal partial least squares (OPLS) were used to build novel multivariate predictive models for indicating the PPRIs production in algae-type zone. Also, the higher concentrations of PPRIs could significantly removal different kinds of organic pollutants, such as bisphenol A (BPA), sulfadiazine (SDZ) and 17α-ethinylestradiol (EE2). Quenching experiments further elucidated that 3DOM⁎ was the key specie for pollutants degradation, serving as the precursor to generate a series of PPRIs. This study highlighted the importance of PPRIs generated from ADOM in the natural attenuation of pollutants and provided a new insight for understanding the self-purification in aquatic system.

Coupled effects of redox-active substances and microbial communities on reactive oxygen species in rhizosphere sediments of submerged macrophytes

Reactive oxygen species (ROS) play crucial roles in element cycling and pollutant dynamics, but their variations and mechanisms in the rhizosphere of submerged macrophytes are poorly investigated. This study investigated the light-dark cycle fluctuations and periodic variations in ROS, redox-active substances, and microbial communities in the rhizosphere of Vallisneria natans. The results showed sustained production and significant diurnal fluctuations in the O2•- and •OH from 27.6 ± 3.7 to 61.7 ± 3.0 μmol/kg FW and 131.0 ± 6.8 to 195.4 ± 8.7 μmol/kg FW, respectively, which simultaneously fluctuated with the redox-active substances. The ROS contents in the rhizosphere were higher than those observed in non-rhizosphere sediments over the V. natans growth period, exhibiting increasing-decreasing trends. According to the redundancy analysis results, water-soluble phenols, fungi, and bacteria were the main factors influencing ROS production in the rhizosphere, showing contribution rates of 74.0, 17.3, and 4.4 %, respectively. The results of partial least squares path modeling highlighted the coupled effects of redox-active substances and microbial metabolism. Our findings also demonstrated the degradation effect of ROS in rhizosphere sediments of submerged macrophytes. This study provides experimental evidence of ROS-related rhizosphere effects and further insights into submerged macrophytes-based ecological restoration.

Desert dust improves the photophysiology of heat-stressed corals beyond iron

Desert dust is an important source of essential metals for marine primary productivity, especially in oligotrophic systems surrounded by deserts, such as the Red Sea. However, there are very few studies on the effects of dust on reef-building corals and none on the response of corals to heat stress. We therefore supplied dust to two coral species (Stylophora pistillata and Turbinaria reniformis) kept under control conditions (26 °C) or heat stress (32 °C). Since dust releases large amounts of iron (Fe) in seawater, among other metals, the direct effect of different forms of Fe enrichment on coral photosynthesis was also tested. First, our results show that the desert dust altered the coral metallome by increasing the content of metals that are important for coral physiology (e.g. lithium (up to 5-fold), manganese (up to 4-fold in S. pistillata), iron (up to 3-fold in S. pistillata), magnesium (up to 1.3-fold), molybdenum (up to 1.5-fold in S. pistillata)). Overall, metal enrichment improved the photosynthetic performance of corals, especially under thermal stress (e.g. Pgross (up to 2-fold), Pnet (up to 10-fold), chlorophyll (up to 1.5-fold), symbionts (up to 1.6-fold)). However, Fe exposure (ferric chloride or ferric citrate) did not directly improve photosynthesis, suggesting that it is the combination of metals released by the dust, the so-called "metal cocktail effect", that has a positive impact on coral photophysiology. Dust also led to a decrease in Ni uptake (up to 1.4-fold in the symbionts), likely related to the nitrogen metabolism. Finally, we found that the isotopic signature of metals such as iron, zinc and copper is a good indicator of heat stress and dust exposure in corals. In conclusion, desert dust can increase coral resistance to bleaching by supplying corals with essential metals.

Cathodic electrochemiluminescence of boron and nitrogen-codoped carbon dots for the detection of dissolved oxygen in seawater

Electrochemiluminescence (ECL) is widely used in various fields due to its high sensitivity and controllable characteristics. Carbon dots (CDs) have emerged as promising ECL emitters due to their simple synthesis, low toxicity, and excellent biocompatibility. However, the practical application of many CDs emitters is hindered by their limited luminous efficiency, often necessitating additional coreactants to enhance the ECL signal intensity. In this study, we synthesized boron and nitrogen-codoped carbon dots (BN-CDs) as ECL emitters, utilizing dissolved oxygen (DO) as the coreactant. The BN-CDs/DO system exhibited a strong cathodic ECL signal. We proposed a reaction mechanism for the BN-CDs/DO ECL system. Additionally, we developed an ECL sensor for DO detection based on this system, showing a linear correlation between ECL peak intensity and DO concentration from 0.5 to 19.8 mg/L, with a detection limit of 0.12 mg/L. It was proven reliable for DO analysis in seawater and freshwater environments. This study provides insights into the synthesis and utilization of BN-CDs, highlighting the potential of DO as an intrinsic coreactant in CDs ECL systems. Furthermore, it provides new perspectives on the detection of DO in seawater and the design of innovative DO sensors.

The generation and transformation mechanisms of reactive oxygen species in the environment and their implications for pollution control processes: A review

Reactive oxygen species (ROS), substances with strong activity generated by oxygen during electron transfer, play a significant role in the decomposition of organic matter in various environmental settings, including soil, water and atmosphere. Although ROS has a short lifespan (ranging from a few nanoseconds to a few days), it continuously generated during the interaction between microorganisms and their environment, especially in environments characterized by strong ultraviolet radiation, fluctuating oxygen concentration or redox conditions, and the abundance of metal minerals. A comprehensive understanding of the fate of ROS in nature can provide new ideas for pollutant degradation and is of great significance for the development of green degradation technologies for organic pollutants. At present, the review of ROS generally revolves around various advanced oxidation processes, but lacks a description and summary of the fate of ROS in nature, this article starts with the definition of reactive oxidants species and reviews the production, migration, and transformation mechanisms of ROS in soil, water and atmospheric environments, focusing on recent developments. In addition, the stimulating effects of ROS on organisms were reviewed. Conclusively, the article summarizes the classic processes, possible improvements, and future directions for ROS-mediated degradation of pollutants. This review offers suggestions for future research directions in this field and provides the possible ROS technology application in pollutants treatment.

Finding microbial composition and biological processes as predictive signature to access the ongoing status of mangrove preservation

Mangroves are complex land-sea transition ecosystems whose microbiota are essential for their nutrient recycling and conservation. Brazil is the third-largest estuarine area in the world and "Baía de Todos os Santos" (BTS) is one of the largest bays of the country, with wide anthropogenic exploration. Using a metagenomic approach, we investigated composition and functional adaptability as signatures of the microbiome of pristine and anthropized areas of BTS, including those under petroleum refinery influence. The taxonomic analysis showed dominance of sulfate-reducing Desulfobacteraceae, Rhodobacteraceae, and Flavobacteriaceae. Taxa were significantly diverse between pristine and disturbed areas. Disturbed mangroves showed a notary increase in abundance of halophilic, sulfur-related, and hydrocarbon-degrading genera and a decrease in diatoms compared to pristine area. The metabolic profile of BTS mangroves was correlated with the differentially abundant microbiota. Two ecological scenarios were observed: one marked by functions of central metabolism associated with biomass degradation and another by mechanisms of microbial adaptability to pollution conditions and environmental degradation. Part of the microbiome was distinct and not abundant in Brazilian estuarine soils. The microbiome signature observed in each BTS mangrove reflects how human actions impact the diversity of these ecosystems and also emphasize their role in attempting to restore disturbed mangroves. The microbiome may act as a potential biological indicator of the preservation status of these soils, despite the limitation of soil property conditions. Additionally, our data pointed to metagenomics as an additional tool for environmental assessment and reinforced the need for protective measures for the mangroves under study.

Toxicity of inorganic nanoparticles and commercial sunscreens on marine bacteria

The Balearic Islands, a top tourist destination for sunny beaches, face physical and chemical pressures from human activities, impacting keystone species like the endemic seagrass Posidonia oceanica and its associated microbiome. This study evaluated the effects of ZnO and TiO2 nanoparticles and three commercial sunscreens with varying protection factors (50 or 90) and chemical complexities (1- SPF50_E "eco-friendly"; 2- SPF50 not "eco-friendly"; 3- SPF90 not "eco-friendly") on five heterotrophic bacteria (Pseudomonas azotifigens, Marinobacterium litorale, Thiothrix nivea, Sedimenticola thiotaurini and Cobetia sp) and two autotrophic cyanobacteria (Halothece sp. and Fischerella muscicola) associated to P. oceanica, as well as a natural leaf epiphytic community. Results indicated that TiO2 affected all heterotrophic bacteria, while ZnO was toxic to only two species, while autotrophs were unaffected. Commercial sunscreens impacted three heterotrophs and the natural epiphytic community, while autotrophs were only affected by SPF50. SPF50_E reduced phosphorus uptake, and both SPF50 and SPF90 decreased alkaline phosphatase activity. Reactive oxygen species production was mainly induced by SPF90, followed by SPF50_E and SPF50. Generally, the smallest bacteria were most sensitive to UV-filters (UVFs). This study indicates that UVFs exposure may alter the epiphytic community structure of P. oceanica.

Comprehensive Assessment of Herbicide Toxicity on Navicula sp. Algae: Effects on Growth, Chlorophyll Content, Antioxidant System, and Lipid Metabolism

This study investigated the effects of herbicide exposure on Navicula sp. (MASCC-0035) algae, focusing on growth density, chlorophyll content, antioxidant system, and lipid metabolism. Navicula cultures were exposed to different concentrations of atrazine (ATZ), glyphosate (Gly), and acetochlor (ACT) for 96 h. Results showed a significant decrease in cell numbers, with higher herbicide concentrations having the most noticeable impacts. For instance, Gly-G2 had reduced cell populations by 21.00% at 96 h. Chlorophyll content varied, with Gly having a greater impact on chlorophyll a compared to ATZ and ACT. Herbicide exposure also affected the antioxidant system, altering levels of soluble sugar, soluble protein, and reactive oxygen species (ROS). Higher herbicide rates increased soluble sugar content (e.g., ATZ, Gly, and ACT-G2 had increased by 14.03%, 19.88%, and 19.83%, respectively, at 72 h) but decreased soluble protein content, notably in Gly-G2 by 11.40%, indicating cellular stress. Lipid metabolism analysis revealed complex responses, with changes in free proline, fatty acids, and lipase content, each herbicide exerting distinct effects. These findings highlight the multifaceted impacts of herbicide exposure on Navicula algae, emphasizing the need for further research to understand ecological implications and develop mitigation strategies for aquatic ecosystems.

Toxicological and Pharmacological Activities, and Potential Medical Applications, of Marine Algal Toxins

Marine algal toxins have garnered significant attention in the research community for their unique biochemical properties and potential medical applications. These bioactive compounds, produced by microalgae, pose significant risks due to their high toxicity, yet offer promising therapeutic benefits. Despite extensive research identifying over 300 marine algal toxins, including azaspiracids, brevetoxins, cyclic imines, and yessotoxins, gaps remain in the understanding of their pharmacological potential. In this paper, we critically review the classification, bioactive components, toxicology, pharmacological activities, and mechanisms of these toxins, with a particular focus on their clinical applications. Our motivation stems from the increasing interest in marine algal toxins as candidates for drug development, driven by their high specificity and affinity for various biological receptors. We aim to bridge the gap between toxicological research and therapeutic application, offering insights into the advantages and limitations of these compounds in comparison to other bioactive substances. This review not only enhances the understanding of marine algal toxins' complexity and diversity, but also highlights their extensive application potential in medicine and bioscience, providing a foundation for future research and development in this field.

Assessment of biodegradation and toxicity of alternative plasticizer di(2-ethylhexyl) terephthalate: Impacts on microbial biofilms, metabolism, and reactive oxygen species-mediated stress response

Although di(2-ethylhexyl) terephthalate (DOTP) is being widely adopted as a non-phthalate plasticizer, existing research primarily focuses on human and rat toxicity. This leaves a significant gap in our understanding of their impact on microbial communities. This study assessed the biodegradation and toxicity of DOTP on microbes, focusing on its impact on biofilms and microbial metabolism using Rhodococcus ruber as a representative bacterial strain. DOTP is commonly found in mass fractions between 0.6 and 20% v/v in various soft plastic products. This study used polyvinyl chloride films (PVC) with varying DOTP concentrations (range 1-10% v/v) as a surface for analysis of biofilm growth. Cell viability and bacterial stress responses were tested using LIVE/DEAD™ BacLight™ Bacterial Viability Kit and by the detection of reactive oxygen species using CellROX™ Green Reagent, respectively. An increase in the volume of dead cells (in the plastisphere biofilm) was observed with increasing DOTP concentrations in experiments using PVC films, indicating the potential negative impact of DOTP on microbial communities. Even at a relatively low concentration of DOTP (1%), signs of stress in the microbes were noticed, while concentrations above 5% compromised their ability to survive. This research provides a new understanding of the environmental impacts of alternative plasticizers, prompting the need for additional research into their wider effects on both the environment and human health.

Genome analysis of Salinimicrobium sp. 3283s, a deep-sea bacterium isolated from the sediments of South China Sea, China

Salinimicrobium sp. 3283s is an aerobic, golden-yellow pigment-producing, Flavobacteriaceae bacterium isolated from the sediments at the depth of 1751 m in the South China Sea. In this study, we present the complete genome sequence of strain 3283s, which only have a single circular chromosome comprising 3,702,683 bp with 41.41% G + C content and no circular plasmid. In total, 3257 protein coding genes, 45 tRNA, 9 rRNA, and 13 sRNA genes were obtained. In terms of the function of gene annotation, strain 3283s was more different from Salinimicrobium oceani J15B91, which was isolated from the South China Sea at a similar depth, and more similar to a Mariana Trench-derived strain Salinimicrobium profundisediminis MT39, which was closer in phylogenetic taxonomic status, suggesting that strain 3283s possesses a stronger potential to adapt to the deep-sea environment. Furthermore, the high- pressure simulations also confirmed that strain 3283s can grow in both 30 MPa and 60 MPa hydrostatic pressure environments, and that it grows better in 30 MPa hydrostatic pressure environments than in 60 MPa hydrostatic pressure environments. In addition, we found a large number of genes in strain 3283s that can promote better adaptation of the bacteria to the low oxygen and high hydrostatic pressure (HHP) environment of the deep sea, such as biosynthetic enzymes of antioxidant pigments, genes encoding cytochromes with enhanced affinity for oxygen, proteins for adaptation to HHP, and genes encoding TonB-dependent transporters in the absence of flagella.

Proteome-wide 4-hydroxy-2-nonenal signature of oxidative stress in the marine invasive tunicate Botryllus schlosseri

The colonial ascidian Boytryllus schlosseri is an invasive marine chordate that thrives under conditions of anthropogenic climate change. We show that the B. schlosseri expressed proteome contains unusually high levels of proteins that are adducted with 4-hydroxy-2-nonenal (HNE). HNE represents a prominent posttranslational modification resulting from oxidative stress. Although numerous studies have assessed oxidative stress in marine organisms HNE protein modification has not previously been determined in any marine species. LC/MS proteomics was used to identify 1052 HNE adducted proteins in B. schlosseri field and laboratory populations. Adducted amino acid residues were ascertained for 1849 modified sites, of which 1195 had a maximum amino acid localization score. Most HNE modifications were at less reactive lysines (rather than more reactive cysteines). HNE prevelance on most sites was high. These observations suggest that B. schlosseri experiences and tolerates high intracellular reactive oxygen species levels, resulting in substantial lipid peroxidation. HNE adducted B. schlosseri proteins show enrichment in mitochondrial, proteostasis, and cytoskeletal functions. Based on these results we propose that redox signaling contributes to regulating energy metabolism, the blastogenic cycle, oxidative burst defenses, and cytoskeleton dynamics during B. schlosseri development and physiology. A DIA assay library was constructed to quantify HNE adduction at 72 sites across 60 proteins that represent a holistic network of functionally discernable oxidative stress bioindicators. We conclude that the vast amount of HNE protein adduction in this circumpolar tunicate is indicative of high oxidative stress tolerance contributing to its range expansion into diverse environments.

NEW & NOTEWORTHY

Oxidative stress results from environmental challenges that increase in frequency and severity during the Anthropocene. Oxygen radical attack causes lipid peroxidation leading to HNE production. Proteome-wide HNE adduction is highly prevalent in Botryllus schlosseri , a widely distributed, highly invasive, and economically important biofouling ascidian and the first marine species to be analyzed for proteome HNE modification. HNE adduction of specific proteins physiologically sequesters reactive oxygen species, which enhances fitness and resilience during environmental change.

Revealing mechanism of phenol-amine reaction to form humus in compost based on high-resolution liquid chromatography mass spectrometry and spectroscopy

Humus is the stable form of carbon storage in straw compost. The phenol-amine reaction is a pathway for humus formation in straw compost. In this study, two reaction systems, GP group (pyrogallol and glycine) and GCP group (catechol, pyrogallol, and glycine), were constructed in a simulated composting environment and revealed the molecular binding mechanism of the phenol-amine reaction through spectroscopy and mass spectrometry. The results showed that phenolic self-polymerization was faster than phenol-amine reaction. Therefore, the aromatization degree of GP was 27.14 % higher than that of GCP. The phenol-amine reaction first produced fulvic acid, and then formed humus units rich in active functional group structures (i.e., phenolic hydroxyl and carboxyl groups). These units further captured small molecule compounds to form humic acid eventually. This study would provide theoretical support for exploring the humus formation process and the promotion of straw humification by adding phenol or amino acids to compost.

Genome analysis of Rossellomorea sp. y25, a deep sea bacterium isolated from the sediments of South China Sea

Rossellomorea sp. y25, a putative new species of yellow pigment-producing, aerobic and chemoheterotrophic bacterium belonging to the family Bacillaceae, was isolated from the sediments at the depth of 1829 m in the South China Sea. In this study, we present the complete genome sequences of strain y25, which consisted of only one circular chromosome with 4,633,006 bp and the content of G + C was 41.76%. A total of 4466 CDSs, 106 tRNA, 33 rRNA, and 101 sRNA genes were obtained. Genomic analysis of strain y25 showed that it has the ability to produce antioxidant carotenoids and a large number of heavy metal resistance genes, such as arsenic, cadmium and zinc. In addition, strain y25 contains a prophage that may contribute to host protection against lysis by related Bacillus-like phages. This is the first report of genome-wide information on a bacterium of the genus Rossellomorea isolated from the deep sea, providing insights into how microorganisms of this genus adapt to deep-sea environments.

Environmental impact assessment of ocean energy converters using quantum machine learning

The depletion of fossil energy reserves and the environmental pollution caused by these sources highlight the need to harness renewable energy sources from the oceans, such as waves and tides, due to their high potential. On the other hand, the large-scale deployment of ocean energy converters to meet future energy needs requires the use of large farms of these converters, which may have negative environmental impacts on the ocean ecosystem. In the meantime, a very important point is the volume of data produced by different methods of collecting data from the ocean for their analysis, which makes the use of advanced tools such as different machine learning algorithms even more colorful. In this article, some environmental impacts of ocean energy devices have been analyzed using machine learning and quantum machine learning. The results show that quantum machine learning performs better than its classical counterpart in terms of calculation accuracy. This approach offers a promising new method for environmental impact assessment, especially in a complex environment such as the ocean.

Humic substance mitigated the microplastic-induced inhibition of hydroxyl radical production in riparian sediment

Hydroxyl radicals (·OH) generated during the flooding-drought transformation process play a vital role in affecting nutrient cycles at riparian zone. However, information on the processes and mechanisms for ·OH formation under the influence of microplastics (MPs) remains unclear. In this study, the effects of MPs on ·OH production from riparian sediments with different biomass [e.g., vegetation lush (VL) and vegetation barren (VB)] were studied. The results showed that presence of MPs inhibited the production of ·OH by 27 % and 7.5 % for VB and VL sediments, respectively. The inhibition was mainly resulted from the MP-induced reduction of the biotic and abiotic mediated Fe redox processes. Spectral analysis revealed that VL sediments contained more high-molecular-weight humic-like substances. Presence of MPs increased the abundances and activities of Proteobacteria, Acidobacteria and Actinobacteria, which were conducive to the changes in humification and polar properties of organic matters. The reduced humic- and fulvic-like substances were accumulated in the flooding period and substantially oxidized during flooding/drought transformation due to the enhanced MP-mediated electron transfer abilities, thus mitigated the MP-induced inhibition effects. Therefore, in order to better understanding the biogeochemical cycling of contaminants as influenced by ·OH and MPs in river ecosystems, humic substances should be considered systematically.

Biochemical responses in Pacific oysters Magallana gigas (Thunberg, 1793): Tools to evaluate the environmental quality of aquaculture areas

The discharge of sanitary sewage into the bays of the Florianópolis Metropolitan Area (Southern Brazil), has led to the contamination of oyster farms. Consequently, linear alkylbenzenes (LABs) were quantified in the sediment, and the biochemical responses in gills and digestive gland of oysters from six farms were assessed. Our findings revealed elevated levels of LABs in the sediment of the Imaruim and Serraria farms. Additionally, alterations were observed in the antioxidant enzymes: catalase, glutathione peroxidase and superoxide dismutase in both oyster tissue from the Serraria, Santo Antonio de Lisboa and Sambaqui farms. Furthermore, correlation analyses indicated strong and moderate associations between biochemical responses, organic contaminants, and certain physicochemical parameters. Consequently, our results demonstrated the activation of the antioxidant system in oysters, representing a protective response to the presence of sanitary sewage and other contaminants. Therefore, we propose the utilization of biochemical biomarkers for monitoring the environmental quality of farms.

Photodegradation of biodegradable plastics in aquatic environments: Current understanding and challenges

Direct and indirect photolysis are important abiotic processes in aquatic environments through which plastics can be transformed physically and chemically. Transport of biodegradable plastics in water is influenced by vertical mixing and turbulent flow, which make biodegradable plastics remain susceptible to sunlight and photolysis despite their high density. In general, biodegradable plastics are composed of ester containing polymers (e.g., poly(butylene succinate), polyhydroxyalkanoate, and polylactic acid), whereas non-biodegradable plastics are composed of long chains of saturated aliphatic hydrocarbons in their backbones (e.g., polyethylene, polypropylene, and polystyrene). Based on the reviewed knowledge and discussion, we may hypothesize that 1) direct photolysis is more pronounced for non-biodegradation than for biodegradable plastics, 2) smaller plastics such as micro/nano-plastics are more prone to photodegradation and photo-transformation by direct and indirect photolysis, 3) the production rate of reactive oxygen species (ROS) on the surface of biodegradable plastics is higher than that of non-biodegradable plastics, 4) the photodegradation of biodegradable plastics may be promoted by ROS produced from biodegradable plastics themselves, and 5) the subsequent reactions of ROS are more active on biodegradable plastics than non-biodegradable plastics. Moreover, micro/nanoplastics derived from biodegradable plastics serve as more effective carriers of organic pollutants than those from non-biodegradable plastics and thus biodegradable plastics may not necessarily be more ecofriendly than non-biodegradable plastics. However, biodegradable plastics have been largely unexplored from the viewpoint of direct or indirect photolysis. Roles of reactive oxygen species originating from biodegradable plastics should be further explored for comprehensively understanding the photodegradation of biodegradable plastics.

Dissolved organic carbon leaching from microplastics and bioavailability in coastal ecosystems

The dissolved organic carbon (DOC) leached from two types of microplastics (polyethylene and polypropylene) frequently found in coastal areas were evaluated in situ. Subsequently, the bioavailability of leached DOC was assessed for microbial inocula from different coastal communities (i.e., estuarine and open-coastal waters, river-mouth waters and seagrass beds). Leached DOC was largely biodegradable (as much as 85 %). However, seagrass beds and river-mouth waters exhibited lower DOC utilization efficiency than estuarine and open-coastal waters, probably because of differences in their microbial communities. The labile/recalcitrant ratio of DOC leached from plastic was similar under illuminated and dark conditions, whereas DOC leached from polyethylene, rather than DOC leached from polypropylene, was preferentially used by microbial communities. We estimated that as many as 21,000 metric tons of DOC leached from plastics may be released into ocean annually. Our results support the need to consider the potential impacts of coastal plastic pollution on microbial communities, including consideration of the trophic webs and coastal carbon cycle.

Temporal variations in reactive oxygen species in biofilms of submerged macrophytes: The key role of microbial metabolism mediated by oxygen fluctuations

Reactive oxygen species (ROS) play a crucial role in the biogeochemistry of aquatic environments, yet their occurrence and accumulation in the biofilm of submerged macrophytes have been poorly documented. Herein, we first investigated the light-dark cycling fluctuations of biofilm microenvironment and the temporal variations of a representative ROS (O2•-) during biofilm succession on the macrophyte leaves and subsequently quantified the photochemical processes in biofilms. The sustained production of O2•- exhibited a distinct rhythmic fluctuation from 32.49 ± 0.56 μmol/kg to 72.56 ± 0.92 μmol/kg FW, which simultaneously fluctuated with the dissolved oxygen, redox potential, and pH, all driven by the alternating oxic-anoxic conditions of biofilms. The intensities of O2•- and ROS firstly increased and then decreased throughout biofilm succession. The O2•- concentrations in biofilms from different waters followed the order of rural river water > landscape lake water > aquaculture pond water, and the leaf photosynthesis and microbial community played a key role. ROS production was significantly associated with Actinobacteria, Proteobacteria and Bacteroidetes, with contributions of 44.6%, 32.8%, and 15.2%, respectively. Partial least squares path modeling structural equation analysis showed that ROS production in leaf biofilms was mainly related to the microenvironment and microbial metabolism. These findings will facilitate the development of ecological restoration strategies in aquatic environments.

Oil from Mullet Roe Byproducts: Effect of Oil Extraction Method on Human Erythrocytes and Platelets

Background: The valorization of byproducts to obtain high nutritional value foods is of utmost importance for our planet where the population is booming. Among these products are oils rich in ω-3 fatty acids produced from fishery byproducts. Recently, mullet roe oil from roe byproducts was produced that was rich in the ω-3 fatty acids eicosatetraenoic acid (EPA) and docosahexaenoic acid (DHA). Oils are customarily characterized for their composition and degree of oxidation but little is known of their biological effects, especially the effect of the extraction method. Methods: The purpose of this study was to evaluate the effects of freshly extracted mullet roe oil from mullet roe byproducts and the effect of the extraction method on human red blood cells (hRBCs) and platelets. To this end, the hemocompatibility (cytotoxicity), oxidative effects, and erythrocyte membrane changes were examined after 1 and 24 h of incubation. Antiplatelet effects were also assessed in vitro. Results: The expeller press oil extraction method and alcalase-assisted extraction produced the most biocompatible oils, as shown by hemocompatibility measurements and the absence of erythrocyte membrane alterations. Solvent extracts and protease-assisted extraction oils resulted in the rupture of red blood cells at different examined dilutions, creating hemolysis. Conclusions: It seems that the proper functioning of oil-erythrocyte interactions cannot be explained solely by ROS. Further investigations combining chemical analysis with oil-cell interactions could be used as an input to design high nutritional value oils using green extraction technologies. All samples exhibited promising antiplatelet and antiblood clotting effects in vitro.

The mechanisms of microcystin-LR-induced genotoxicity and neurotoxicity in fish and mammals: Bibliometric analysis and meta-analysis

Microcystin-leucine arginine (MC-LR) is a typical cyanobacterial toxin, and the threat of this toxin is increasing among organisms. Despite extensive toxicological studies on MC-LR, there is no comprehensive analysis based on previously published data. Therefore, we conducted bibliometric analysis and meta-analysis to identify research hotspots and to elucidate the key mechanism of the relationship between MC-LR and genotoxicity and neurotoxicity among fish and mammals. One of the hotspots is toxic mechanisms (indicated by the frequent appearance of oxidative stress, DNA damage, apoptosis, neurotoxicity, genotoxicity, ROS, comet assay, signalling pathway, and gene expression indicate as keywords). The density visualization shows a high frequency of "microcystin-LR" and "toxicology," and the overlay visualization emphasizes the prominence of "neurotoxicity" in recent years. These findings confirm the importance of studying MC-LR toxicity. Meta-analysis indicated that in both fish and mammals, MC-LR exposure increased ROS levels by 294 % and increased DNA damage biomarkers by 174 % but decreased neurotoxicity biomarkers by 9 %. Intergroup comparisons revealed that the exposure concentration of MC-LR was significantly correlated with genotoxicity and neurotoxicity levels in both fish and mammals (p < 0.05). Furthermore, the random forest (RF) model revealed that exposure concentration was the primary determinant associated with the induction of ROS, genotoxicity, and neurotoxicity induced by MC-LR. This is likely the dominant mechanism by which excessive ROS production induced by MC-LR causes oxidative stress, ultimately leading to genotoxicity and neurotoxicity in both fish and mammals.

Singlet oxygen in the removal of organic pollutants: An updated review on the degradation pathways based on mass spectrometry and DFT calculations

The degradation of pollutants by a non-radical pathway involving singlet oxygen (1O2) is highly relevant in advanced oxidation processes. Photosensitizers, modified photocatalysts, and activated persulfates can generate highly selective 1O2 in the medium. The selective reaction of 1O2 with organic pollutants results in the evolution of different intermediate products. While these products can be identified using mass spectrometry (MS) techniques, predicting a proper degradation mechanism in a 1O2-based process is still challenging. Earlier studies utilized MS techniques in the identification of intermediate products and the mechanism was proposed with the support of theoretical calculations. Although some reviews have been reported on the generation of 1O2 and its environmental applications, a proper review of the degradation mechanism by 1O2 is not yet available. Hence, we reviewed the possible degradation pathways of organic contaminants in 1O2-mediated oxidation with the support of density functional theory (DFT). The Fukui function (FF, f-, f+, and f0), HOMO-LUMO energies, and Gibbs free energies obtained using DFT were used to identify the active site in the molecule and the degradation mechanism, respectively. Electrophilic addition, outer sphere type single electron transfer (SET), and addition to the hetero atoms are the key mechanisms involved in the degradation of organic contaminants by 1O2. Since environmental matrices contain several contaminants, it is difficult to experiment with all contaminants to identify their intermediate products. Therefore, the DFT studies are useful for predicting the intermediate compounds during the oxidative removal of the contaminants, especially for complex composition wastewater.

Calcifying Coccolithophore: An Evolutionary Advantage Against Extracellular Oxidative Damage

The evolutionary advantages afforded by phytoplankton calcification remain enigmatic. In this work, fluoroelectrochemical experiments reveal that the presence of a CaCO3 shell of a naturally calcifying coccolithophore, Coccolithus braarudii, offers protection against extracellular oxidants as measured by the time required for the switch-off in their chlorophyll signal, compared to the deshelled equivalents, suggesting the shift toward calcification offers some advantages for survival in the surface of radical-rich seawater.

Corals and sponges are hotspots of reactive oxygen species in the deep sea

Reactive oxygen species (ROS) are central to diverse biological processes through which organisms respond to and interact with their surroundings. Yet, a lack of direct measurements limits our understanding of the distribution of ROS in the ocean. Using a recently developed in situ sensor, we show that deep-sea corals and sponges produce the ROS superoxide, revealing that benthic organisms can be sources and hotspots of ROS production in these environments. These findings confirm previous contentions that extracellular superoxide production by corals can be independent of the activity of photosynthetic symbionts. The discovery of deep-sea corals and sponges as sources of ROS has implications for the physiology and ecology of benthic organisms and introduces a previously overlooked suite of redox reactants at depth.

Photodegradation of glyphosate in water and stimulation of by-products on algae growth

Glyphosate is the most widely used herbicide in global agricultural cultivation. However, little is known about the environmental risks associated with its migration and transformation. We conducted light irradiation experiments to study the dynamics and mechanism of photodegradation of glyphosate in ditches, ponds and lakes, and evaluated the effect of glyphosate photodegradation on algae growth through algae culture experiments. Our results showed that glyphosate in ditches, ponds and lakes could undergo photochemical degradation under sunlight irradiation with the production of phosphate, and the photodegradation rate of glyphosate in ditches could reach 86% after 96 h under sunlight irradiation. Hydroxyl radicals (•OH) was the main reactive oxygen species (ROS) for glyphosate photodegradation, and its steady-state concentrations in ditches, ponds and lakes were 6.22 × 10-17, 4.73 × 10-17, and 4.90 × 10-17 M. The fluorescence emission-excitation matrix (EEM) and other technologies further indicated that the humus components in dissolved organic matter (DOM) and nitrite were the main photosensitive substances producing •OH. In addition, the phosphate generated by glyphosate photodegradation could greatly promote the growth of Microcystis aeruginosa, thereby increasing the risk of eutrophication. Thus, glyphosate should be scientifically and reasonably applied to avoid environmental risks.

Transcriptome Responses to Different Environments in Intertidal Zones in the Peanut Worm Sipunculus nudus

The peanut worm (Sipunculus nudus) is an important intertidal species worldwide. Species living in the same aquaculture area might suffer different environmental impacts. To increase knowledge of the molecular mechanisms underlying the response to environmental fluctuations, we performed a transcriptome analysis of S. nudus from different intertidal zones using a combination of the SMRT platform and the Illumina sequencing platform. (1) A total of 105,259 unigenes were assembled, and 23,063 unigenes were perfectly annotated. The results of the PacBio Iso-Seq and IIIumina RNA-Seq enriched the genetic database of S. nudus. (2) A total of 830 DEGs were detected in S. nudus from the different groups. In particular, 33 DEGs had differential expression in the top nine KEGG pathways related to pathogens, protein synthesis, and cellular immune response and signaling. The results indicate that S. nudus from different zones experience different environmental stresses. (3) Several DEGs (HSPA1, NFKBIA, eEF1A, etc.) in pathways related to pathogens (influenza A, legionellosis, measles, and toxoplasmosis) had higher expression in groups M and L. HSPA1 was clearly enriched in most of the pathways, followed by NFKBIA. The results show that the peanut worms from the M and L tidal flats might have suffered more severe environmental conditions. (4) Some DEGs (MKP, MRAS, and HSPB1) were upregulated in peanut worms from the H tidal flat, and these DEGs were mainly involved in the MAPK signaling pathway. These results indicate that the MAPK pathway may play a vital role in the immune response of the peanut worm to the effects of different intertidal flats. This study provides a valuable starting point for further studies to elucidate the molecular basis of the response to different environmental stresses in S. nudus.

Hydroxyl radicals in natural waters: Light/dark mechanisms, changes and scavenging effects

Hydroxyl radicals (•OH) are the most active, aggressive and oxidative reactive oxygen species. In the natural aquatic environment, •OH plays an important role in the biogeochemistry cycle, biotransformation, and pollution removal. This paper reviewed the distribution and formation mechanism of •OH in aquatic environments, including natural waters, colloidal substances, sediments, and organisms. Furthermore, factors affecting the formation and consumption of •OH were thoroughly discussed, and the mechanisms of •OH generation and scavenging were summarized. In particular, the effects of climate change and artificial work on •OH in the largest natural aquatic environment, i.e., marine environment was analyzed with the help of bibliometrics. Moreover, Fenton reactions make the •OH variation more complicated and should not be neglected, especially in those areas with suspended particles and sediments. Regarding the •OH variation in the natural aquatic environment, more attention should be given to global change and human activities.

Abiotic plastic leaching contributes to ocean acidification

Ocean acidification and plastic pollution are considered as potential planetary boundary threats for which crossing certain thresholds could be very harmful for the world's societies and ecosystems well-being. Surface oceans have acidified around 0.1 units since the Industrial Revolution, and the amount of plastic reaching the ocean in 2018 was quantified to 13 million metric tonnes. Currently, both ocean threats are worsening with time. Plastic leaching is known to alter the biogeochemistry of the ocean through the release of dissolved organic matter. However, its impact in the inorganic chemistry of the seawater is less studied. Here we show, from laboratory experiments, that abiotic plastic degradation induces a decrease in seawater pH, particularly if the plastic is already aged, as that found in the ocean. The pH decrease is enhanced by solar radiation, and it is probably induced from a combination of the release of organic acids and the production of CO2. It is also related to the amount of leached dissolved organic carbon, with higher acidification as leaching increases. In coastal areas, where plastic debris accumulates in large quantities, plastic leaching could lead to a seawater pH decrease up to 0.5 units. This is comparable to the projected decrease induced in surface oceans by the end of the twenty-first century for the most pessimistic anthropogenic emissions scenarios.

Oxidative Stress Regulates a Pivotal Metabolic Switch in Dimethylsulfoniopropionate Degradation by the Marine Bacterium Ruegeria pomeroyi

Dimethylsulfoniopropionate (DMSP) is an abundant organic compound in marine surface water and source of dimethyl sulfide (DMS), the largest natural sulfur source to the upper atmosphere. Marine bacteria either mineralize DMSP through the demethylation pathway or transform it to DMS through the cleavage pathway. Factors that regulate which pathway is utilized are not fully understood. In chemostat experiments, the marine Roseobacter Ruegeria pomeroyi DSS-3 was exposed to oxidative stress either during growth with H2O2 or by mutation of the gene encoding catalase. Oxidative stress reduced expression of the genes in the demethylation pathway and increased expression of those encoding the cleavage pathway. These results are contrary to the sulfur demand hypothesis, which theorizes that DMSP metabolism is driven by sulfur requirements of bacterial cells. Instead, we find strong evidence consistent with oxidative stress control over the switch in DMSP metabolism from demethylation to DMS production in an ecologically relevant marine bacterium. IMPORTANCE Dimethylsulfoniopropionate (DMSP) is the most abundant low-molecular-weight organic compound in marine surface water and source of dimethyl sulfide (DMS), a climatically active gas that connects the marine and terrestrial sulfur cycles. Marine bacteria are the major DMSP consumers, either generating DMS or consuming DMSP as a source of reduced carbon and sulfur. However, the factors regulating the DMSP catabolism in bacteria are not well understood. Marine bacteria are also exposed to oxidative stress. RNA sequencing (RNA-seq) experiments showed that oxidative stress induced in the laboratory reduced expression of the genes encoding the consumption of DMSP via the demethylation pathway and increased the expression of genes encoding DMS production via the cleavage pathway in the marine bacterium Ruegeria pomeroyi. These results support a model where DMS production in the ocean is regulated in part by oxidative stress.

Integrated evaluation of the reactive oxygen species (ROS) production characteristics in one large lake under alternating flood and drought conditions

Reactive oxygen species (ROS) are omnipresent in natural aquatic environments, and play an important role in biogeochemical cycles. One of the dominant sources of ROS in surface waters was thought to be from dissolved organic matter (DOM) interacting with photochemical process. The properties of DOM were different between the flood and drought periods in lakes; yet, information on how these variations influence ROS photoproduction is unknown. Through a three-year study, the photochemical properties of DOM and the resultant ROS photoproduction between the flood and drought period were determined in the largest freshwater lake in China (Lake Poyang). Results found that quantum yield coefficients of excited triplets (³CDOM*), apparent quantum yields of singlet oxygen (¹O₂) and hydroxyl radicals (•OH) were holistically higher in the flood period than those in the drought period. The optical properties of DOM showed that DOM in the flood period featured an allochthonous input, accompanied by higher molecular size (E2/E3), aromatic content (SUVA₂₅₄), humification degree (HIX), while DOM in the drought period was mainly internal input. Fourier transform ion cyclotron resonance mass spectrometry (FI-ICR MS) further revealed that some refractory components, such as lignin-like and carboxyl-rich alicyclic molecules (CRAM) presented higher abundance in the flood period, and played the positive impacts on ROS production. Orthogonal partial least squares (OPLS) were used to build novel multivariate predictive models for indicating the spatio-temporal ROS production. Also, the relatively higher steady-state concentrations of ³CDOM* and ¹O₂ in the flood period could significantly diminish the half-lives of acetochlor. Considering the photochemical activity of DOM varied considerably at different periods, this study provided a new method to predict ROS production and contributed to a new insight into stage-specific emerging contaminants removing in natural aquatic environments.

Effect of leaching time on phytotoxicity of dissolved organic matter derived from black carbon based on spectroscopy

Black carbon (BC) exports huge amounts of its derived DOM from terrestrial ecosystems annually through a variety of ways (i.e., erosion or runoff migration). The pyrolytic feedstock type and temperature resulted in DOM derived from highly condensed aromatic and non-aromatic BC. However, the behaviors of low aromatic BC-derived DOM at diverse leaching time are poorly understood. In this work, low aromatic BCs were prepared by pyrolysis corn straws at 250 °C, 350 °C and 450 °C. Extraction experiments for four leaching time (6 h, 10 h, 15 h and 21 h) were set up to simulate BC-derived DOM generative process in nature. The phytotoxicity of BC-derived DOM was evaluated via germination index (GI). Spectral characteristics were discussed to analyze the phytotoxicity variations of fluorescence components composition at different time, including the excitation-emission matrix-parallel factor, two-dimensional correlation spectra and Fourier transform infrared spectroscopy. The results suggested that low aromatic BC-derived DOM might contain aromatic phenolic compounds. A longer time contributed to accumulate the complex, hard-to-use organic matters, leading to lower GI. These results would supplement the dynamic spectral characteristics of low aromatic BC-derived DOM and its environmental risks during the leaching process.

Visible-Light Activation of a Dissolved Organic Matter-TiO2 Complex Mediated via Ligand-to-Metal Charge Transfer

Given the widespread use of TiO₂, its release into aquatic systems and complexation with dissolved organic matter (DOM) are highly possible, making it important to understand how such interactions affect photocatalytic activity under visible light. Here, we show that humic acid/TiO₂ complexes (HA/TiO₂) exhibit photoactivity (without significant electron-hole activation) under visible light through ligand-to-metal charge transfer (LMCT). The observed visible-light activities for pollutant removal and bacterial inactivation are primarily linked to the generation of H₂O₂via the conduction band. By systematically considering molecular-scale interactions between TiO₂ and organic functional groups in HA, we find a key role of phenolic groups in visible-light absorption and H₂O₂ photogeneration. The photochemical formation of H₂O₂ in river waters spiked with TiO₂ is notably elevated above naturally occurring H₂O₂ generated from background organic constituents due to LMCT contribution. Our findings suggest that H₂O₂ generation by HA/TiO₂ is related to the quantity and functional group chemistry of DOM, which provides chemical insights into photocatalytic activity and potential ecotoxicity of TiO₂ in environmental and engineered systems.

Diffusional Interactions among Marine Phytoplankton and Bacterioplankton: Modelling H2O2 as a Case Study

Marine phytoplankton vary widely in size across taxa, and in cell suspension densities across habitats and growth states. Cell suspension density and total biovolume determine the bulk influence of a phytoplankton community upon its environment. Cell suspension density also determines the intercellular spacings separating phytoplankton cells from each other, or from co-occurring bacterioplankton. Intercellular spacing then determines the mean diffusion paths for exchanges of solutes among co-occurring cells. Marine phytoplankton and bacterioplankton both produce and scavenge reactive oxygen species (ROS), to maintain intracellular ROS homeostasis to support their cellular processes, while limiting damaging reactions. Among ROS, hydrogen peroxide (H2O2) has relatively low reactivity, long intracellular and extracellular lifetimes, and readily crosses cell membranes. Our objective was to quantify how cells can influence other cells via diffusional interactions, using H2O2 as a case study. To visualize and constrain potentials for cell-to-cell exchanges of H2O2, we simulated the decrease of [H2O2] outwards from representative phytoplankton taxa maintaining internal [H2O2] above representative seawater [H2O2]. [H2O2] gradients outwards from static cell surfaces were dominated by volumetric dilution, with only a negligible influence from decay. The simulated [H2O2] fell to background [H2O2] within ~3.1 µm from a Prochlorococcus cell surface, but extended outwards 90 µm from a diatom cell surface. More rapid decays of other, less stable ROS, would lower these threshold distances. Bacterioplankton lowered simulated local [H2O2] below background only out to 1.2 µm from the surface of a static cell, even though bacterioplankton collectively act to influence seawater ROS. These small diffusional spheres around cells mean that direct cell-to-cell exchange of H2O2 is unlikely in oligotrophic habits with widely spaced, small cells; moderate in eutrophic habits with shorter cell-to-cell spacing; but extensive within phytoplankton colonies.