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Petcharoen P, Nolan M, Kirkbride KP, Linacre A. Shedding more light on shedders. Forensic Sci Int Genet 2024; 72:103065. [PMID: 38851033 DOI: 10.1016/j.fsigen.2024.103065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 04/15/2024] [Accepted: 05/26/2024] [Indexed: 06/10/2024]
Abstract
We report on testing 100 individuals for their shedder status with the aim of demonstrating whether the process of cell staining is reproducible when testing a large number of people. A previous report using the same method was based on 11 donors and indicated that there may be a continuum of shedder types within this small sample set. In this report we also expand the time points post-handwashing to 0, 15, 30, 60, and 180 min. Triplicate samples were collected from both the right and left thumbs. Samples were collected by donors placing a thumb on a clean glass slide and then adding a DNA binding dye. The number of cells were recorded within three separate square millimetre areas (cells/mm2) at 220x magnification. The experiments were conducted in triplicate on three different days, giving a total of 72 thumbprints per individual. Finally, there were 3438 observed frames in the entire dataset. Of the 100 donors, 98 gave consistent and reproducible cell number deposition. There was no difference between the cells deposited by the left and right thumbs in 13 of 15 tested. Males tended to deposit more cells than females. If applying arbitrary boundary to a cell count to definitively determine shedder status, then many of the donors fell within two categories. This study based on 100 individuals strongly suggests that shedder status is a continuum phenomenon.
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Affiliation(s)
- Piyamas Petcharoen
- School of Biology, Institute of Science, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand
| | - Madison Nolan
- College of Science & Engineering, Flinders University, Adelaide 5042, Australia
| | - K Paul Kirkbride
- College of Science & Engineering, Flinders University, Adelaide 5042, Australia
| | - Adrian Linacre
- College of Science & Engineering, Flinders University, Adelaide 5042, Australia.
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2
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Arsenault H, Kuffel A, Daeid NN, Gray A. Trace DNA and its persistence on various surfaces: A long term study investigating the influence of surface type and environmental conditions - Part one, metals. Forensic Sci Int Genet 2024; 70:103011. [PMID: 38324952 DOI: 10.1016/j.fsigen.2024.103011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Revised: 01/15/2024] [Accepted: 01/15/2024] [Indexed: 02/09/2024]
Abstract
It is imperative for proper evidence triage that forensic biologists understand what kind of results to expect from certain evidence types submitted for DNA analysis. The persistence of trace DNA has been insufficiently investigated and there is little data available pertaining to the persistence of DNA in different environmental conditions and on different materials. The goal of this study is to increase the available data on this topic which would, in turn, help forensic biologists manage expectations when submitting specific evidence types for DNA testing. The work presented herein is a large-scale persistence project aimed to identify trends in the persistence of trace DNA and indicate how different environmental storage conditions and target surface characteristics influence the persistence of cellular and cell free DNA (cfDNA) over time. To eliminate variation within the experiment we used a proxy DNA deposit consisting of a synthetic fingerprint solution, cellular DNA, and/or cfDNA. Samples were collected and analysed from 7 metals over the course of 1 year (27 time points) under 3 different environmental storage conditions. The results of this experiment show that metal type greatly influences DNA persistence. For instance, copper exhibited an expected poor DNA persistence (up to 4 h) which a purification step did not help increase the DNA yield. Alternatively, DNA can persist for up to a year on lead at levels potentially high enough to allow for forensic DNA testing. Additionally, this study showed that the sample storage environment had no impact on DNA persistence in most cases. When considering DNA type, cfDNA was shown to persist for longer than cellular DNA and persistence as a whole appears to be better when DNA is deposited as mixtures over when deposited alone. Unsurprisingly, it can be expected that DNA recovery rates from trace deposits will decrease over time. However, DNA decay is highly dependent on the metal surface and extremely variable at short time points but slightly less variable as time since deposition increases. This data is intended to add to our understanding of DNA persistence and the factors which affect it.
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Affiliation(s)
- Hilary Arsenault
- Leverhulme Research Center for Forensic Science, University of Dundee, Smalls Wynd, Dundee DD1 4HN, UK.
| | - Agnieszka Kuffel
- Leverhulme Research Center for Forensic Science, University of Dundee, Smalls Wynd, Dundee DD1 4HN, UK
| | - Niamh Nic Daeid
- Leverhulme Research Center for Forensic Science, University of Dundee, Smalls Wynd, Dundee DD1 4HN, UK
| | - Alexander Gray
- Leverhulme Research Center for Forensic Science, University of Dundee, Smalls Wynd, Dundee DD1 4HN, UK
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3
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Jansson L, Siti C, Hedell R, Forsberg C, Ansell R, Hedman J. Assessing the consistency of shedder status under various experimental conditions. Forensic Sci Int Genet 2024; 69:103002. [PMID: 38176092 DOI: 10.1016/j.fsigen.2023.103002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 12/15/2023] [Accepted: 12/16/2023] [Indexed: 01/06/2024]
Abstract
Shedder status is defined as the propensity of an individual to leave DNA behind on touched items or surfaces and has been suggested as one of the major factors influencing DNA transfer. However, little is known about whether shedder status is a constant property of an individual across multiple measurements or when the environmental conditions are changed. We have assessed DNA depositions of six males on 20 occasions to acquire a reference data set and to classify the participants into high, intermediate, or low shedders. This data set was also used to investigate how the probability of a correct shedder status classification changed when the number of DNA deposition measurements increased. Individual sweat rates were measured with a VapoMeter and data regarding hygiene routines were collected through a questionnaire on each sampling occasion. Next, we investigated how changes in the experimental conditions such as seasonal variation, hygiene routines, the temperature of the touched object, and repeated handling of an object influenced the DNA shedding. Additionally, we assessed DNA collected from the face and from T-shirts worn by the six participants to explore whether shedder status may be associated with the relative amount of DNA obtained from other body parts. Our results indicate that shedder status is a stable property across different seasons and different temperatures of handled objects. The relative DNA amounts obtained from repeatedly handled tubes, worn T-shirts, and from faces reflected the shedder status of the participants. We suggest that an individual's shedder status is highly influenced by the DNA levels on other body parts than hands, accumulating on the palms by frequently touching e.g., the face or previously handled items harboring self-DNA. Assessing physiological differences between the participants revealed that there were no associations between DNA shedding and individual sweat rates.
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Affiliation(s)
- Linda Jansson
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden; Applied Microbiology, Department of Chemistry, Lund University, Lund, Sweden
| | - Chiara Siti
- Applied Microbiology, Department of Chemistry, Lund University, Lund, Sweden
| | - Ronny Hedell
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden
| | | | - Ricky Ansell
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden; Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping, Sweden
| | - Johannes Hedman
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden; Applied Microbiology, Department of Chemistry, Lund University, Lund, Sweden.
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4
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Onofri M, Tommolini F, Severini S, Gambelunghe C, Lancia M, Carlini L, Carnevali E. Trace DNA Transfer in Co-Working Spaces: The Importance of Background DNA Analysis. Int J Mol Sci 2024; 25:2207. [PMID: 38396883 PMCID: PMC10888653 DOI: 10.3390/ijms25042207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 02/08/2024] [Accepted: 02/09/2024] [Indexed: 02/25/2024] Open
Abstract
The presence of background DNA (bgDNA) can hinder the evaluation of DNA evidence at the activity level, especially when the suspect is expected to be retrieved due to their habitual occupation of the investigated environment. Based on real-life casework circumstances, this study investigates the prevalence, composition, origin, and probable transfer routes of bgDNA found on personal items in situations where their owner and person of interest (POI) share the same workspace. Baseline values of bgDNA were evaluated on the participants' personal items. Secondary and higher degree transfer scenarios of non-self DNA deposition were also investigated. The DNA from co-workers and co-inhabiting partners can be recovered from an individual's personal belongings. Non-self DNA present on the hands and deposited on a sterile surface can generate uninformative profiles. The accumulation of foreign DNA on surfaces over time appears to be crucial for the recovery of comparable profiles, resulting in detectable further transfer onto other surfaces. For a thorough evaluation of touch DNA traces at the activity level, it is necessary to collect information not only about DNA transfer probabilities but also about the presence of the POI as part of the 'baseline' bgDNA of the substrates involved.
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Affiliation(s)
- Martina Onofri
- Forensic Sciences Laboratory, Section of Legal Medicine, Department of Medicine and Surgery, Santa Maria Hospital, University of Perugia, 05100 Terni, Italy; (F.T.); (S.S.); (E.C.)
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy; (C.G.); (M.L.); (L.C.)
| | - Federica Tommolini
- Forensic Sciences Laboratory, Section of Legal Medicine, Department of Medicine and Surgery, Santa Maria Hospital, University of Perugia, 05100 Terni, Italy; (F.T.); (S.S.); (E.C.)
| | - Simona Severini
- Forensic Sciences Laboratory, Section of Legal Medicine, Department of Medicine and Surgery, Santa Maria Hospital, University of Perugia, 05100 Terni, Italy; (F.T.); (S.S.); (E.C.)
| | - Cristiana Gambelunghe
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy; (C.G.); (M.L.); (L.C.)
| | - Massimo Lancia
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy; (C.G.); (M.L.); (L.C.)
| | - Luigi Carlini
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy; (C.G.); (M.L.); (L.C.)
| | - Eugenia Carnevali
- Forensic Sciences Laboratory, Section of Legal Medicine, Department of Medicine and Surgery, Santa Maria Hospital, University of Perugia, 05100 Terni, Italy; (F.T.); (S.S.); (E.C.)
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5
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Recipon M, Agniel R, Leroy-Dudal J, Fritz T, Carreiras F, Hermitte F, Hubac S, Gallet O, Kellouche S. Targeting cell-derived markers to improve the detection of invisible biological traces for the purpose of genetic-based criminal identification. Sci Rep 2023; 13:18105. [PMID: 37872292 PMCID: PMC10593828 DOI: 10.1038/s41598-023-45366-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Accepted: 10/18/2023] [Indexed: 10/25/2023] Open
Abstract
At a crime scene, investigators are faced with a multitude of traces. Among them, biological traces are of primary interest for the rapid genetic-based identification of individuals. "Touch DNA" consists of invisible biological traces left by the simple contact of a person's skin with objects. To date, these traces remain undetectable with the current methods available in the field. This study proposes a proof-of-concept for the original detection of touch DNA by targeting cell-derived fragments in addition to DNA. More specifically, adhesive-structure proteins (laminin, keratin) as well as carbohydrate patterns (mannose, galactose) have been detected with keratinocyte cells derived from a skin and fingermark touch-DNA model over two months in outdoor conditions. Better still, this combinatory detection strategy is compatible with DNA profiling. This proof-of-concept work paves the way for the optimization of tools that can detect touch DNA, which remains a real challenge in helping investigators and the delivery of justice.
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Affiliation(s)
- Mathilde Recipon
- Equipe de Recherche sur les Relations Matrice Extracellulaire-Cellules, ERRMECe, (EA1391), Groupe Matrice Extracellulaire et Physiopathologie (MECuP), Institut des Matériaux, I-MAT (FD4122), CY Cergy Paris Université, Neuville sur Oise, France.
- Institut de Recherche Criminelle de la Gendarmerie Nationale, Cergy-Pontoise, France.
| | - Rémy Agniel
- Equipe de Recherche sur les Relations Matrice Extracellulaire-Cellules, ERRMECe, (EA1391), Groupe Matrice Extracellulaire et Physiopathologie (MECuP), Institut des Matériaux, I-MAT (FD4122), CY Cergy Paris Université, Neuville sur Oise, France
| | - Johanne Leroy-Dudal
- Equipe de Recherche sur les Relations Matrice Extracellulaire-Cellules, ERRMECe, (EA1391), Groupe Matrice Extracellulaire et Physiopathologie (MECuP), Institut des Matériaux, I-MAT (FD4122), CY Cergy Paris Université, Neuville sur Oise, France
| | - Thibaud Fritz
- Institut de Recherche Criminelle de la Gendarmerie Nationale, Cergy-Pontoise, France
| | - Franck Carreiras
- Equipe de Recherche sur les Relations Matrice Extracellulaire-Cellules, ERRMECe, (EA1391), Groupe Matrice Extracellulaire et Physiopathologie (MECuP), Institut des Matériaux, I-MAT (FD4122), CY Cergy Paris Université, Neuville sur Oise, France
| | - Francis Hermitte
- Institut de Recherche Criminelle de la Gendarmerie Nationale, Cergy-Pontoise, France
| | - Sylvain Hubac
- Institut de Recherche Criminelle de la Gendarmerie Nationale, Cergy-Pontoise, France
| | - Olivier Gallet
- Equipe de Recherche sur les Relations Matrice Extracellulaire-Cellules, ERRMECe, (EA1391), Groupe Matrice Extracellulaire et Physiopathologie (MECuP), Institut des Matériaux, I-MAT (FD4122), CY Cergy Paris Université, Neuville sur Oise, France
| | - Sabrina Kellouche
- Equipe de Recherche sur les Relations Matrice Extracellulaire-Cellules, ERRMECe, (EA1391), Groupe Matrice Extracellulaire et Physiopathologie (MECuP), Institut des Matériaux, I-MAT (FD4122), CY Cergy Paris Université, Neuville sur Oise, France
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Onofri M, Altomare C, Severini S, Tommolini F, Lancia M, Carlini L, Gambelunghe C, Carnevali E. Direct and Secondary Transfer of Touch DNA on a Credit Card: Evidence Evaluation Given Activity Level Propositions and Application of Bayesian Networks. Genes (Basel) 2023; 14:genes14050996. [PMID: 37239356 DOI: 10.3390/genes14050996] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 04/24/2023] [Accepted: 04/26/2023] [Indexed: 05/28/2023] Open
Abstract
In a judiciary setting, questions regarding the mechanisms of transfer, persistence, and recovery of DNA are increasingly more common. The forensic expert is now asked to evaluate the strength of DNA trace evidence at activity level, thus assessing if a trace, given its qualitative and quantitative features, could be the result of an alleged activity. The present study is the reproduction of a real-life casework scenario of illicit credit card use by a co-worker (POI) of its owner (O). After assessing the shedding propensity of the participants, differences in DNA traces' qualitative and quantitative characteristics, given scenarios of primary and secondary transfer of touch DNA on a credit card, a non-porous plastic support, were investigated. A case-specific Bayesian Network to aid statistical evaluation was created and discrete observations, meaning the presence/absence of POI as a major contributor in both traces from direct and secondary transfer, were used to inform the probabilities of disputed activity events. Likelihood Ratios at activity level (LRα) were calculated for each possible outcome resulting from the DNA analysis. In instances where only POI and POI plus an unknown individual are retrieved, the values obtained show moderate to low support in favour of the prosecution proposition.
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Affiliation(s)
- Martina Onofri
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy
| | - Cristina Altomare
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy
| | - Simona Severini
- Section of Legal Medicine, Department of Medicine and Surgery, Santa Maria Hospital, University of Perugia, 05100 Terni, Italy
| | - Federica Tommolini
- Section of Legal Medicine, Department of Medicine and Surgery, Santa Maria Hospital, University of Perugia, 05100 Terni, Italy
| | - Massimo Lancia
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy
| | - Luigi Carlini
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy
| | - Cristiana Gambelunghe
- Section of Legal Medicine, Department of Medicine and Surgery, University of Perugia, 06123 Perugia, Italy
| | - Eugenia Carnevali
- Section of Legal Medicine, Department of Medicine and Surgery, Santa Maria Hospital, University of Perugia, 05100 Terni, Italy
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Kaesler T, Kirkbride KP, Linacre A. Improvements, factors, and influences on DNA recovery from firearms. Forensic Sci Int Genet 2023; 65:102873. [PMID: 37094516 DOI: 10.1016/j.fsigen.2023.102873] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 01/31/2023] [Accepted: 04/13/2023] [Indexed: 04/26/2023]
Abstract
Touch DNA recovery from firearms can be central to many criminal investigations, yet the generation of DNA profiles from these items remains poor. Currently in Australia, published casework data highlights extremely poor DNA success from samples recovered from firearms. Only between 5% and 25% of samples result in useful DNA data and therefore increasing the success of DNA recovered from firearms is highly important but has not yet been explored in-depth. This study focused on increasing the recovery of DNA from ten firearm components that were held for 15 s. Multiple recovery methods were used, and the resulting genetic data compared. DNA evidence may be deliberately removed from firearms after discharge to hamper forensic investigations, therefore this study examined the effect of wiping down the components or handling them with gloves. A standard double swab and rinse swab recovery method resulted in an average of 73% cellular recovery. A cumulative swab process had the highest average recovery at 86%, although it was found that increasing the DNA yield led to an increase in mixture complexity. Wiping over the components was observed to remove on average 69% of cellular material, compared with 33% when handed with gloves. However, the size and texture of the components affected the efficiency of cellular material removal. The results from this study allow for prioritisation of areas to sample on firearms, as well as suggesting techniques that can be applied for the optimum process of cellular recovery and subsequent generation of STR DNA data.
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Affiliation(s)
- Todd Kaesler
- College of Science & Engineering, Flinders University, Adelaide 5042, South Australia, Australia.
| | - K Paul Kirkbride
- College of Science & Engineering, Flinders University, Adelaide 5042, South Australia, Australia
| | - Adrian Linacre
- College of Science & Engineering, Flinders University, Adelaide 5042, South Australia, Australia
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Morgan AG, Prinz M. Development of Improved DNA Collection and Extraction Methods for Handled Documents. Genes (Basel) 2023; 14:genes14030761. [PMID: 36981031 PMCID: PMC10048427 DOI: 10.3390/genes14030761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 03/06/2023] [Accepted: 03/16/2023] [Indexed: 03/30/2023] Open
Abstract
Handwritten documents may contain probative DNA, but most crime laboratories do not process this evidence. DNA recovery should not impair other evidence processing such as latent prints or indented writing. In this study, single fingermarks on paper were sampled with flocked swabs, cutting, and dry vacuuming. In addition, two extraction methods were compared for the sample type. DNA yields were low across all methods; however, this work confirms the ability to recover DNA from paper and the usefulness of the vacuum sampling method combined with the Chelex-Tween method. Stability of touch DNA deposits were compared over an 11-month period to better understand degradation that may occur over time. No significant difference in DNA recovery was observed, suggesting DNA deposits on paper are stable over an 11-month span.
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Affiliation(s)
- Ashley G Morgan
- Department of Forensic Science, University of New Haven, 300 Boston Post Road, West Haven, CT 06516, USA
| | - Mechthild Prinz
- Department of Sciences, John Jay College, 524 West 59th Street, New York, NY 10019, USA
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9
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Carlin M, Nickel R, Halstead K, Viray J, Hall A, Ehrlich A. Quantifying DNA loss in laboratory-created latent prints due to fingerprint processing. Forensic Sci Int 2023; 344:111595. [PMID: 36805977 DOI: 10.1016/j.forsciint.2023.111595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2022] [Revised: 12/16/2022] [Accepted: 02/01/2023] [Indexed: 02/05/2023]
Abstract
Fingerprints, which are associated with touch samples, typically contain a limited amount of DNA. The amount of available DNA can be further reduced when the same touch samples undergo fingerprint processing [1]. The fingerprint development process consists of high-powered lighting (inherent luminescence and UV light) and chemical compounds (ninhydrin, black powder, cyanoacrylate, and rhodamine 6 G) which could reduce DNA quality and quantity. Therefore, forensic scientists often must select one type of analysis over the other due to the destructive nature of processing. DNA and latent fingerprinting are both useful sources for identification, although both can produce partial results. A partial DNA profile may only contain a few alleles, limiting the ability to identify a potential suspect to perform comparisons. A partial fingerprint generally means that only a very small part of the fingerprint is present, which makes comparisons difficult. Because partial results are common, combining data from both fingerprinting and DNA analysis would increase the confidence of an identification of a person. Significant research has been performed to determine if a DNA profile can be obtained from latent processed fingerprints; however, there has yet to be research done in a standardized manner. In this study, we used standardized mock "fingerprints" in order to reduce fingerprint DNA variability and specifically focused on DNA quantitation after each step in the fingerprinting process. Results suggest that latent print processing techniques used on non-porous surfaces (plastic, duct-tape, metal, and rubber) do not affect DNA quantity or quality. In contrast, ninhydrin, a chemical used for processing fingerprints present on porous surfaces (wood and paper), significantly reduced DNA recovery. Together these results suggest that DNA can still be performed on latent print processed items, unless ninhydrin has been used.
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Affiliation(s)
- Madison Carlin
- Forensic Sciences Graduate Group, University of California, Davis, CA, USA; Sacramento County District Attorney's Laboratory of Forensic Services, Sacramento, CA, USA; Michigan State Police, Forensic Science Division, Grand Rapids, MI, USA
| | - Ryan Nickel
- Sacramento County District Attorney's Laboratory of Forensic Services, Sacramento, CA, USA
| | | | - Joy Viray
- Sacramento County District Attorney's Laboratory of Forensic Services, Sacramento, CA, USA
| | - Ashley Hall
- Forensic Sciences Graduate Group, University of California, Davis, CA, USA
| | - Allison Ehrlich
- Forensic Sciences Graduate Group, University of California, Davis, CA, USA; Department of Environmental Toxicology, University of California, Davis, CA, USA.
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10
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Huffman K, Hanson E, Ballantyne J. Y-STR mixture deconvolution by single-cell analysis. J Forensic Sci 2023; 68:275-288. [PMID: 36183153 DOI: 10.1111/1556-4029.15150] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 09/06/2022] [Accepted: 09/13/2022] [Indexed: 12/31/2022]
Abstract
Since Y-STR typing only amplifies male Y chromosomal DNA, it can simplify the interpretation of some DNA mixtures that contain female DNA. However, if there are multiple male contributors, mixed Y-STR DNA profiles will often be obtained. Y-STR mixture analysis cases are particularly challenging though as, currently, there are no validated probabilistic genotyping (PG) software solutions commercially available to aid in their interpretation. One approach to fully deconvoluting these challenging mixtures into their individual donors is to conduct single-cell genotyping by isolating individual cells from a mixture prior to conducting DNA typing. In this work, a physical micromanipulation technique involving a tungsten needle and direct PCR with decreased reaction volume and increased cycle number was applied to equimolar 2- and 3-person buccal cell male DNA mixtures and a mock touch DNA case scenario involving the consecutive firing of a handgun by two males. A consensus DNA profiling approach was then utilized to obtain YFiler™ Plus Y-STR haplotypes. Buccal cells were used to optimize and test the direct single-cell subsampling approach, and 2-3 person male buccal cell mixtures were fully deconvoluted into their individual donor Y-STR haplotypes. Single-cell (or agglomerated cell clump) subsampling from the gun's trigger recovered single-source Y-STR profiles from both individuals who fired the gun, the owner, and the other unrelated male. Only the non-owner's DNA was found in the cells recovered from the handle. In summary, direct single-cell subsampling as described represents a potential simple way to analyze and interpret Y-STR mixtures.
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Affiliation(s)
- Kaitlin Huffman
- Graduate Program in Chemistry, Department of Chemistry, University of Central Florida, Orlando, Florida, USA
| | - Erin Hanson
- Graduate Program in Chemistry, Department of Chemistry, University of Central Florida, Orlando, Florida, USA.,National Center for Forensic Science, Orlando, Florida, USA.,Department of Chemistry, University of Central Florida, Orlando, Florida, USA
| | - Jack Ballantyne
- Graduate Program in Chemistry, Department of Chemistry, University of Central Florida, Orlando, Florida, USA.,National Center for Forensic Science, Orlando, Florida, USA.,Department of Chemistry, University of Central Florida, Orlando, Florida, USA
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11
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Tozzo P, Mazzobel E, Marcante B, Delicati A, Caenazzo L. Touch DNA Sampling Methods: Efficacy Evaluation and Systematic Review. Int J Mol Sci 2022; 23:15541. [PMID: 36555182 PMCID: PMC9779423 DOI: 10.3390/ijms232415541] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Revised: 12/01/2022] [Accepted: 12/06/2022] [Indexed: 12/13/2022] Open
Abstract
Collection and interpretation of "touch DNA" from crime scenes represent crucial steps during criminal investigations, with clear consequences in courtrooms. Although the main aspects of this type of evidence have been extensively studied, some controversial issues remain. For instance, there is no conclusive evidence indicating which sampling method results in the highest rate of biological material recovery. Thus, this study aimed to describe the actual considerations on touch DNA and to compare three different sampling procedures, which were "single-swab", "double-swab", and "other methods" (i.e., cutting out, adhesive tape, FTA® paper scraping), based on the experimental results published in the recent literature. The data analysis performed shows the higher efficiency of the single-swab method in DNA recovery in a wide variety of experimental settings. On the contrary, the double-swab technique and other methods do not seem to improve recovery rates. Despite the apparent discrepancy with previous research, these results underline certain limitations inherent to the sampling procedures investigated. The application of this information to forensic investigations and laboratories could improve operative standard procedures and enhance this almost fundamental investigative tool's probative value.
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Affiliation(s)
- Pamela Tozzo
- Department of Cardiac, Thoracic, Vascular Sciences and Public Health, Legal Medicine Section, University of Padova, 35121 Padova, Italy
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12
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Petcharoen P, Kirkbride KP, Linacre A. Monitoring cell loss through repetitive deposition. J Forensic Sci 2022; 67:2453-2457. [DOI: 10.1111/1556-4029.15140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 09/05/2022] [Accepted: 09/08/2022] [Indexed: 11/28/2022]
Affiliation(s)
- Piyamas Petcharoen
- School of Biology, Institute of Science Suranaree University of Technology Nakhon Ratchasima Thailand
- College of Science & Engineering Flinders University Adelaide South Australia Australia
| | | | - Adrian Linacre
- College of Science & Engineering Flinders University Adelaide South Australia Australia
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13
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Seiberle I, Währer J, Kron S, Flury K, Girardin M, Schocker A, Schulz I. Collaborative swab performance comparison and the impact of sampling solution volumes on DNA recovery. Forensic Sci Int Genet 2022; 59:102716. [DOI: 10.1016/j.fsigen.2022.102716] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Revised: 04/19/2022] [Accepted: 04/25/2022] [Indexed: 11/04/2022]
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14
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Chen C, Lin Y, Yu H, Xue Y, Xu Q, Jiang L, Zhu R, Chen A, Yang Y, Xia R, Zhang X, Yang Q, Tao R, Zhu B, Li C, Zhang S. Establishing an integrated pipeline for automatic and efficient detection of trace DNA encountered in forensic applications. Sci Justice 2022; 62:50-59. [PMID: 35033328 DOI: 10.1016/j.scijus.2021.10.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 08/13/2021] [Accepted: 10/26/2021] [Indexed: 11/26/2022]
Abstract
The analysis of trace DNA is a crucial component in forensic applications. Biological materials containing low-level DNA collected at crime scenes, such as fingerprints, can be valuable as evidence. Automatic detection of biological samples has been largely embraced in forensic applications to meet the increasing throughput requirements. However, the amount of DNA automatically retrieved from trace evidence often tends to be small and unstable, ultimately resulting in poor detection of DNA profiles. Thus, in this work, we introduced a robust DNA extraction and purification platform named Bionewtech® BN3200 (Bionewtech®, Shanghai, China) with the goal of constructing a rapid automatic detection system for trace DNA. The establishment of automatic detection system for trace DNA mainly encompassed two parts: assessing the sensitivity of automatic extraction platform and screening the optimal short tandem repeat (STR) typing kit. The sensitivity of Bionewtech® BN3200 platform based on Ultra-sensitive DNA Extraction kit was initially estimated, demonstrating that this extraction platform might contain large potential in the trace DNA extraction. For the amplification part, three sets of commercial multiplex STR typing kits were selected as candidates, and the amplified products were further genotyped on the Applied Biosystems 3500xl Genetic Analyzer. After comparation, SiFa™ 23 Plex Kit was determined as the most suitable amplification system for trace DNA. Eventually, the newly exploited trace DNA detection system was successfully implemented in the detection of fingerprints derived from glass surfaces with the five-seconds contact time. As a result, the DNA recovered from the fingerprints fluctuated approximately from 57.60 pg to 18.05 ng, in addition, over 70% of the total STR loci were detected in 75% of the fingerprint samples.
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Affiliation(s)
- Chong Chen
- College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an 710061, China; Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China
| | - Yuan Lin
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China
| | - Huan Yu
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China; Department of Forensic Science, Medical School of Soochow University, Suzhou 215123, China
| | - Yu Xue
- Bionewtech® Company., Ltd., Shanghai 201615, China
| | - Qiannan Xu
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China; Institute of Forensic Medicine, West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, Chengdu, China
| | - Lei Jiang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China
| | - Ruxin Zhu
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China
| | - Anqi Chen
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China; Department of Forensic Medicine, Shanghai Medical College of Fudan University, Shanghai 200032, China
| | - Yue Yang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China; School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010030, China
| | - Ruocheng Xia
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China; Department of Forensic Medicine, School of Basic Medical Science, Wenzhou Medical University, Wenzhou 325035, China
| | - Xiaochun Zhang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China; Department of Forensic Science, Medical School of Soochow University, Suzhou 215123, China
| | - Qi Yang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China; Department of Forensic Science, Medical School of Soochow University, Suzhou 215123, China
| | - Ruiyang Tao
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China
| | - Bofeng Zhu
- College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an 710061, China
| | - Chengtao Li
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China.
| | - Suhua Zhang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Sciences, Ministry of Justice, Shanghai 200063, China.
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15
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Jansson L, Swensson M, Gifvars E, Hedell R, Forsberg C, Ansell R, Hedman J. Individual shedder status and the origin of touch DNA. Forensic Sci Int Genet 2021; 56:102626. [PMID: 34781198 DOI: 10.1016/j.fsigen.2021.102626] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 10/27/2021] [Accepted: 10/27/2021] [Indexed: 11/17/2022]
Abstract
Due to improved laboratory techniques, touched surfaces and items are increasingly employed as sources of forensic DNA evidence. This has urged a need to better understand the mechanisms of DNA transfer between individuals. Shedder status (i.e. the propensity to leave DNA behind) has been identified as one major factor regulating DNA transfer. It is known that some individuals tend to shed more DNA than others, but the mechanisms behind shedder status are largely unknown. By comparing the amounts of DNA deposited from active hands (i.e. used "as usual") and inactive hands (i.e. not allowed to touch anything), we show that some of the self-DNA deposited from hands is likely to have accumulated on hands from other parts of the body or previously handled items (active hands: 2.1 ± 2.7 ng, inactive hands: 0.83 ± 1.1 ng, paired t-test: p = 0.014, n = 27 pairs of hands). Further investigation showed that individual levels of deposited DNA are highly associated with the level of DNA accumulation on the skin of the face (Pearson's correlation: r = 0.90, p < 0.00001 and Spearman's ranked correlation: rs = 0.56, p = 0.0016, n = 29). We hypothesized that individual differences in sebum secretion levels could influence the amount of DNA accumulation in facial areas, but no such correlation was seen (Pearson's correlation: r = - 0.13, p = 0.66, n = 14). Neither was there any correlation between DNA levels on hands or forehead and the time since hand or face wash. We propose that the amount of self-DNA deposited from hands is highly influenced by the individual levels of accumulated facial DNA, and that cells/DNA is often transferred to hands by touching or rubbing one's face.
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Affiliation(s)
- Linda Jansson
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden; Applied Microbiology, Department of Chemistry, Lund University, Lund, Sweden
| | - Marie Swensson
- Applied Microbiology, Department of Chemistry, Lund University, Lund, Sweden
| | - Emma Gifvars
- Applied Microbiology, Department of Chemistry, Lund University, Lund, Sweden
| | - Ronny Hedell
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden
| | | | - Ricky Ansell
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden; Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping, Sweden
| | - Johannes Hedman
- National Forensic Centre, Swedish Police Authority, Linköping, Sweden; Applied Microbiology, Department of Chemistry, Lund University, Lund, Sweden.
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16
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Shedder status: Exploring means of determination. Sci Justice 2021; 61:391-400. [DOI: 10.1016/j.scijus.2021.03.004] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 03/09/2021] [Accepted: 03/13/2021] [Indexed: 01/29/2023]
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17
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Johannessen H, Gill P, Roseth A, Fonneløp AE. Determination of shedder status: A comparison of two methods involving cell counting in fingerprints and the DNA analysis of handheld tubes. Forensic Sci Int Genet 2021; 53:102541. [PMID: 34090062 DOI: 10.1016/j.fsigen.2021.102541] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 05/25/2021] [Accepted: 05/26/2021] [Indexed: 01/13/2023]
Abstract
The shedder status of an individual may be important to consider in the context of DNA transfer, persistence and recovery and in Bayesian networks where a person's shedder status may have an impact on the outcome. In this study we compared two methods to determine shedder status: the handheld tube (HH) method and a fluorescent cell count (CC) method. A poor association was observed between the numbers of detected cells in a fingerprint using the CC method and the strength of the DNA result with the HH method. The 20 participants were classified into low (25%), medium (50%) and high (25%) shedders based on the HH method. While the low and high shedders showed a good consistency between the replicates, the medium shedders varied more and have to be considered more carefully as they may act as either a high or a low shedder in an event of DNA transfer.
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Affiliation(s)
- Helen Johannessen
- Department of Forensic Medicine, Institute of Clinical Medicine, University of Oslo, Norway.
| | - Peter Gill
- Department of Forensic Medicine, Institute of Clinical Medicine, University of Oslo, Norway; Department of Forensic Sciences, Oslo University Hospital, Norway
| | - Arne Roseth
- Department of Forensic Sciences, Oslo University Hospital, Norway
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18
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Valentine JL, Presler-Jur P, Mills H, Miles S. Evidence Collection and Analysis for Touch Deoxyribonucleic Acid in Groping and Sexual Assault Cases. JOURNAL OF FORENSIC NURSING 2021; 17:67-75. [PMID: 33843809 PMCID: PMC8140663 DOI: 10.1097/jfn.0000000000000324] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/05/2020] [Accepted: 02/07/2021] [Indexed: 06/12/2023]
Abstract
Historically, evidence collection in sexual assault cases focused on obtaining foreign contributor bodily fluids through swab collection. With improvements in deoxyribonucleic acid (DNA) analysis methods, DNA profiles can be developed from touch DNA and applied to sexual assault cases. Following a literature review on factors affecting touch DNA transfer, a groping case study with innovative evidence collection is presented to support the expansion of touch DNA evidence collection in sexual assault cases. The groping case led to the development of a statewide sexual assault touch DNA form to guide evidence collection. DNA findings from additional groping sexual assault cases are reported to further show and justify the importance of evidence collection in groping cases. Implications on multidisciplinary practices are summarized to promote evidence collection and analysis in groping sexual assault cases. As forensic nurses are educated to accurately collect DNA evidence and provide trauma-informed, patient-centered care, they are best suited to provide nursing care for patients who have experienced groping sexual assaults. Optimal DNA findings in groping and sexual assault cases are best achieved through development of strong multidisciplinary, collaborative relationships between forensic nurses and forensic scientists.
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19
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Schmidt M, Bamberg M, Dierig L, Kunz SN, Wiegand P. The diversity of shedder tests and a novel factor that affects DNA transfer. Int J Legal Med 2021; 135:1267-1280. [PMID: 33783604 DOI: 10.1007/s00414-021-02533-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2020] [Accepted: 02/10/2021] [Indexed: 01/27/2023]
Abstract
Since the first shedder test was formulated almost 20 years ago, a plethora of different test strategies has emerged. The amount of data generated so far is considerable. However, because of the limited reproducibility of its results, the reliability of the shedder concept is frequently questioned. This study provides a literature overview of applied shedder tests that capture the diversity of the concept. It is pointed out to what extent different classification criteria, workflows, and trace evaluation can impair the classification outcome. The robustness of shedder status was assessed by applying a promising approach established by Fonneløp et al. (Forensic Sci Int Genet 29:48-60, 21). Data provide similar results to those in recent studies but also ambiguous shedder classifications. The applied shedder test was adapted based on our own as well as the reviewed data. With novel classification parameters, promising results were achieved. This study reveals uncertainties and inconsistencies of the shedder concept. Recommendations for harmonization and transparency are proposed. Implementation of the recommendations may result in an increased impact on casework and transfer studies, including activity-level assessments. Furthermore, this study shows that moisturizers affect participants' shedder status as well as DNA transfer. The impact appears to remain relevant even 60 min post ointment application but depends greatly on the type of moisturizer applied.
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Affiliation(s)
- Max Schmidt
- Institute of Legal Medicine, University Ulm, Albert-Einstein-Allee 23, 89081, Ulm, Germany.
| | - Malte Bamberg
- Institute of Legal Medicine, University Ulm, Albert-Einstein-Allee 23, 89081, Ulm, Germany
| | - Lisa Dierig
- Institute of Legal Medicine, University Ulm, Albert-Einstein-Allee 23, 89081, Ulm, Germany
| | - Sebastian N Kunz
- Institute of Legal Medicine, University Ulm, Albert-Einstein-Allee 23, 89081, Ulm, Germany
| | - Peter Wiegand
- Institute of Legal Medicine, University Ulm, Albert-Einstein-Allee 23, 89081, Ulm, Germany
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20
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McLaughlin P, Hopkins C, Springer E, Prinz M. Non-destructive DNA recovery from handwritten documents using a dry vacuum technique. J Forensic Sci 2021; 66:1443-1451. [PMID: 33656180 DOI: 10.1111/1556-4029.14696] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Revised: 02/07/2021] [Accepted: 02/09/2021] [Indexed: 11/26/2022]
Abstract
Investigations of many crimes such as robberies, kidnappings, and terrorism are often associated with the recovery of a paper document which has been written by the perpetrator. Paper can provide a variety of forensic evidence such as DNA, latent fingermarks, and indented writing. The focus of this study was DNA recovery from handwritten notes through a vacuum suction device while preserving the other evidence types and the integrity of the document. Copy paper was used to create handwritten documents and sheets with deliberate fingerprints, and indentations. The homemade vacuum device consists of a glass pipette blocked with a moistened swab and attached to a vacuum source. The method collected sufficient DNA amounts for DNA typing analysis with 80% of the 11 copy paper samples tested giving probative DNA profiles with five being eligible for DNA database entry. DNA recovery was also tested on other commonly encountered paper types. DNA quantities would have been sufficient for STR typing for approximately 50% of manila envelopes and notebook paper samples, but not for magazine pages and bank deposit slips. Deliberate sebaceous and eccrine latent fingermarks placed onto copy paper and developed with magnetic fingerprint developer or 1,2 indanedione were not affected by the vacuum swabbing technique. Simulated robbery notes with indented writing and processed using an Electrostatic Detection Apparatus (ESDA) demonstrated no interference through the DNA collection. This vacuum-based collection method enables laboratories to reverse the current questioned document workflow and start with DNA collection.
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21
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Meakin GE, Kokshoorn B, Oorschot RAH, Szkuta B. Evaluating forensic
DNA
evidence: Connecting the dots. ACTA ACUST UNITED AC 2020. [DOI: 10.1002/wfs2.1404] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Georgina E. Meakin
- Centre for Forensic Science University of Technology Sydney Ultimo NSW Australia
- Centre for the Forensic Sciences, Department of Security and Crime Science University College London London UK
| | - Bas Kokshoorn
- Netherlands Forensic Institute The Hague The Netherlands
| | - Roland A. H. Oorschot
- Office of the Chief Forensic Scientist, Victoria Police Forensic Services Department Macleod Australia
- School of Molecular Sciences La Trobe University Bundoora Australia
| | - Bianca Szkuta
- Office of the Chief Forensic Scientist, Victoria Police Forensic Services Department Macleod Australia
- School of Life and Environmental Sciences Deakin University Geelong Australia
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22
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Exploration of cell-free DNA (cfDNA) recovery for touch deposits. Forensic Sci Int Genet 2020; 51:102431. [PMID: 33260058 DOI: 10.1016/j.fsigen.2020.102431] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2020] [Revised: 11/12/2020] [Accepted: 11/15/2020] [Indexed: 12/15/2022]
Abstract
Although touch deposit DNA is widely used in forensic casework, its cellular and acellular contents and their biological origins are poorly understood. There is evidence that the cell-free component of DNA deposited by handling may contribute substantial genetic information; however, most research into touch DNA recovery does not separate cellular and cell-free fractions or seek to characterize their contents. This work is an important early step in developing methods to isolate the cfDNA from biological material deposited by handling. Size-filtration as a separation technique was determined to be prone to DNA loss, even on optimized control samples of pure ladder DNA. Centrifugal separation was optimized to determine minimum speed and time required to reliably remove all cellular debris from the material collected by rinsing donor hands. To determine if the centrifugal force risked rupturing shed corneocyte cells and releasing cellular DNA into the supernatant, DNA levels were measured, and cells were visualized microscopically before and after centrifugation of hand rinses. Heated buccal cells were used as a positive control to demonstrate cell rupture would be detected with these methods. Following the determination of a suitable separation technique, an investigation into purification methods for cfDNA was conducted. DNA recovery using three kits for plasma cfDNA, one for PCR clean-up and one for genomic DNA were assessed on both ladder DNA to simulate cfDNA fragments and on collected hand deposit supernatants from both unwashed and washed hands. Purification methods designed for recovery of short DNA fragments from plasma yielded the highest recovery percentage across sample types, with BioChain cfPure performing the best. Donors' hands were shown to shed high levels of cfDNA, which were better recovered with a method for short fragments than with a traditional genomic technique often used on touch DNA samples.
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23
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Gosch A, Euteneuer J, Preuß-Wössner J, Courts C. DNA transfer to firearms in alternative realistic handling scenarios. Forensic Sci Int Genet 2020; 48:102355. [PMID: 32707471 DOI: 10.1016/j.fsigen.2020.102355] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Revised: 07/05/2020] [Accepted: 07/08/2020] [Indexed: 12/24/2022]
Abstract
Firearms are the most relevant items of evidence in gun-related crimes, likely bearing various traces facilitating an objective reconstruction of the crime. Trace DNA recovered from firearm surfaces might help to identify individual(s) having handled the firearm and thereby possibly to link the firearm and the corresponding shooter, however, the interpretation of DNA traces on handled items can be challenging and requires a detailed understanding of various factors impacting DNA prevalence, transfer, persistence and recovery. Herein, we aimed at improving our understanding of factors affecting the variability of trace DNA characteristics recovered from firearms handled in gun-related crimes: Skin contact traces were recovered from various outer surfaces of two types of firearms handled in four realistic, casework-relevant handling scenarios and the corresponding trace characteristics (DNA yield, number of contributors, relative profile contribution for known and unknown contributors, LRs) were compared. Trace DNA characteristics differed distinctly between handling conditions, firearm and surface types as well as handling individuals and intraindividual deposits emphasizing the variability and complexity of trace DNA profile composition expected to be recovered from firearms after realistic handling scenarios. The obtained results can provide useful insights for forensic experts evaluating alternative activity level propositions in gun-related crimes.
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Affiliation(s)
- Annica Gosch
- Institute of Forensic Medicine, University Medical Center Schleswig-Holstein, Kiel, Germany
| | - Jan Euteneuer
- Institute of Forensic Medicine, University Medical Center Schleswig-Holstein, Kiel, Germany
| | - Johanna Preuß-Wössner
- Institute of Forensic Medicine, University Medical Center Schleswig-Holstein, Kiel, Germany
| | - Cornelius Courts
- Institute of Forensic Medicine, University Medical Center Schleswig-Holstein, Kiel, Germany.
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24
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Harush-Brosh Y, Mayuoni-Kirshenbaum L, Mashiach Y, Hauzer M, Hefetz I, Bengiat R, Levin-Elad M, Faerman M. An efficient and eco-friendly workflow for dual fingermark processing and STR profiling. Forensic Sci Int Genet 2020; 47:102310. [PMID: 32460221 DOI: 10.1016/j.fsigen.2020.102310] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2019] [Revised: 04/06/2020] [Accepted: 05/14/2020] [Indexed: 11/30/2022]
Abstract
Since its discovery in 1997, DNA retrieved from touched or handled items (touch DNA) has been increasingly used in criminal casework. Depending on the nature of the substrate examined, numerous techniques are being used for fingermark (FM) collection and development, however, it has been shown that FM processing may impede or even prevent the dual analysis of FMs and DNA. In search for a possible solution, we have recently established a novel workflow for a non-destructive collection and eco-friendly visualization of latent FMs using white BVDA gel-lifters and black Wetwop® solution. In the present study, the scope and limitations of the proposed protocol were thoroughly examined for DNA recovery and genotyping in relation to substrate type (porous and non-porous), time elapsed after the deposition (1, 7 and 14 days) and donor's gender. The study included 120 developed FMs of 20 donors (10 males and 10 females, aged 25-50 years), from which 240 DNA samples were recovered and quantified. The independent analysis of two DNA samples recovered from each FM, one - from the adhesive surface of the gel-lifter and the other - from its imprint on the protecting acetate cover, allowed us not only to increase the total number of the identified donors, but also to achieve a higher level of confidence per FM. Though this approach appeared to be more efficient on non-porous substrates (up to 65% on car tin), it is noteworthy that forensically useful DNA profiles (with at least 8 full STR loci) were generated from poor-quality FMs on the porous substrate, drywall (25% and 15% in males and females, respectively). Finally, the integration of the results of touch DNA analysis and that of FM visual inspection allowed us to increase by more than half the number of personal identifications and to strengthen the chain of forensic evidence.
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Affiliation(s)
- Yinon Harush-Brosh
- Institute of Dental Sciences, The Hebrew University - Hadassah School of Dental Medicine, POB 12272, Jerusalem, 9112102, Israel
| | - Lina Mayuoni-Kirshenbaum
- Biology & DNA Laboratory, Division of Identification and Forensic Science (DIFS), Israel Police, National H.Q., Jerusalem, 9780204, Israel
| | - Yakov Mashiach
- Biology & DNA Laboratory, Division of Identification and Forensic Science (DIFS), Israel Police, National H.Q., Jerusalem, 9780204, Israel
| | | | - Ido Hefetz
- Fingerprint Database Laboratory, Division of Identification and Forensic Science (DIFS), Israel Police, National H.Q., Jerusalem, 9780204, Israel
| | - Ravell Bengiat
- Latent Fingerprint Laboratory, Division of Identification and Forensic Science (DIFS), Israel Police, National H.Q., Jerusalem, 9780204, Israel
| | - Michal Levin-Elad
- Latent Fingerprint Laboratory, Division of Identification and Forensic Science (DIFS), Israel Police, National H.Q., Jerusalem, 9780204, Israel
| | - Marina Faerman
- Institute of Dental Sciences, The Hebrew University - Hadassah School of Dental Medicine, POB 12272, Jerusalem, 9112102, Israel.
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25
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Casework direct kit as an alternative extraction method to enhance touch DNA samples analysis. Forensic Sci Int Genet 2020; 47:102307. [PMID: 32447230 DOI: 10.1016/j.fsigen.2020.102307] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Revised: 04/28/2020] [Accepted: 04/30/2020] [Indexed: 11/20/2022]
Abstract
Latent fingerprints are commonly found in crime scenes, and currently used in forensic analysis to obtain STR profiles from DNA recovered from finger contact. Analysis of STR profiles obtained from touch DNA has been very useful to elucidate crimes and the extraction method may be determinant for the recovery of genetic material collected from different surfaces. This study aimed to verify and compare the efficiency of two different extraction kits for processing touch DNA samples obtained from fingerprints deposited on computer keyboards, knife handles and exterior door handles and steering wheels of cars. One hundred and four experiments were conducted to simulate crime scenes and evaluate the efficiency of two extraction kits for touch DNA samples: the DNA IQ™ System and the Casework Direct Kit (both Promega Corporation). Each experiment was conducted with two individuals in order to obtain a mixture profile. The genetic material deposited was collected by double swab method (Sweet et al. 1997) and DNA quantification was conducted using Quantifiler Trio™ (ThermoFisher Scientific). Samples were amplified by PowerPlex® Fusion System kit (Promega). It was possible to obtain STR profiles for 32 (61.5%) out of the 52 extracted using DNA IQ and 51 (98.1%) out of the 52 extracted using the Casework Direct Kit. Samples extracted by DNA IQ had higher average of quantification values for long targets (>200bp) across all tested surfaces. That seems to be due to an incompatibility between the Quantifiler Trio and the Casework Direct Kit. Samples with positive quantification but without STR profile, as well as samples without quantification but with STR profiles were also observed. Statistical analysis showed that the Casework Direct Kit produced significantly more useful profiles than DNA IQ (p-value = 0.001), since these profiles had more STR markers with allelic correspondence to second donators present in the mixture. This study provides insights about the effect of different surfaces and extraction methods on recovery and generation of STR profiles. Limitations for the quantification step for these samples with a low quantity of DNA were highlighted as well. We concluded that the Casework Direct Kit was much more efficient for processing touch DNA samples than DNA IQ.
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26
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Burrill J, Daniel B, Frascione N. Illuminating touch deposits through cellular characterization of hand rinses and body fluids with nucleic acid fluorescence. Forensic Sci Int Genet 2020; 46:102269. [PMID: 32155589 DOI: 10.1016/j.fsigen.2020.102269] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 02/20/2020] [Accepted: 02/29/2020] [Indexed: 12/23/2022]
Abstract
Forensic DNA typing from touched or handled items in routine casework is increasing as the sensitivity of detection techniques improves. Our understanding of the cellular/acellular content of touch deposits and the origins of the DNA therein is still limited. This work explores the cellular content of rinses from washed and unwashed hands, as well as saliva, nasal and eye washes which could be sources of transferred DNA onto hands. Flow cytometry and microscopic examination were used to detect granularity, size and nucleic acid fluorescence data. Cellular content did not vary significantly within an individual, although some differences were observed between donors. Saliva contained populations of nucleated epithelia as well as smaller cells and debris, all positive for DNA. Hand rinses consisted almost entirely of anucleate corneocytes, many of which also stained positive for nucleic acids. These data raise questions about shed corneocyte DNA content previously assumed to be negligible.
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Affiliation(s)
- Julia Burrill
- King's Forensics, Department of Analytical, Environmental & Forensic Sciences, School of Population Health & Environmental Sciences, King's College London, Franklin-Wilkins Building, 4.122, 150 Stamford Street, London SE1 9NH, United Kingdom.
| | - Barbara Daniel
- King's Forensics, Department of Analytical, Environmental & Forensic Sciences, School of Population Health & Environmental Sciences, King's College London, Franklin-Wilkins Building, 4.122, 150 Stamford Street, London SE1 9NH, United Kingdom.
| | - Nunzianda Frascione
- King's Forensics, Department of Analytical, Environmental & Forensic Sciences, School of Population Health & Environmental Sciences, King's College London, Franklin-Wilkins Building, 4.122, 150 Stamford Street, London SE1 9NH, United Kingdom.
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27
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Dierig L, Schmidt M, Wiegand P. Looking for the pinpoint: Optimizing identification, recovery and DNA extraction of micro traces in forensic casework. Forensic Sci Int Genet 2020; 44:102191. [DOI: 10.1016/j.fsigen.2019.102191] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Revised: 10/08/2019] [Accepted: 10/17/2019] [Indexed: 12/17/2022]
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28
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Detection of cellular material within handprints. FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES 2019. [DOI: 10.1016/j.fsigss.2019.09.075] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Abstract
We report on the visualization of cellular material within lip-prints using Diamond™ dye (DD). The transfer of cellular material via the lips can occur in cases of contact with food or drinking items as well as cases of alleged sexual assault involving oral contact. DD can effectively detect cellular material transferred by touch. Here we investigate if lip-prints can be detected and whether there is consistency within, or variability between, a person's propensity to shed cells within lip-prints. Ten volunteers were asked to press their lips against a glass slide with medium pressure for 15 s after not eating or drinking for at least 30 min. Both upper and lower lips were observed, and all tests were performed in five replicates, giving in total 900 observed areas. Consistency in the amount of cellular material deposited by lip-prints for each of the 10 individuals was observed, with each individual being associated with a 'lip shedder' status between the extremes of heavy and light. The majority of females shed more cells than the majority of males. No correlation was observed between the lip-prints shedder-status compared to deposition of cellular material from a thumb. Further, no correlation was observed between lip morphology and the 'lip shedder' status. Visualization of cellular material was not affected by lip-balm but was adversely affected by cosmetics such as lipstick. This technique demonstrates the visualization of deposited cells from parts of the body other than fingers and how cellular material can be visualized allowing targeted collection of DNA.
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Sterling S, Mason KE, Anex DS, Parker GJ, Hart B, Prinz M. Combined
DNA
Typing and Protein Identification from Unfired Brass Cartridges,,,. J Forensic Sci 2019; 64:1475-1481. [DOI: 10.1111/1556-4029.14042] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Revised: 02/15/2019] [Accepted: 02/15/2019] [Indexed: 12/25/2022]
Affiliation(s)
| | - Katelyn E. Mason
- Lawrence Livermore National Laboratory 7000 East Avenue Livermore CA 94550
| | - Deon S. Anex
- Lawrence Livermore National Laboratory 7000 East Avenue Livermore CA 94550
| | | | - Bradley Hart
- Lawrence Livermore National Laboratory 7000 East Avenue Livermore CA 94550
| | - Mechthild Prinz
- John Jay College of Criminal Justice 524 W. 59th St. New York NY 10019
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A review of trace “Touch DNA” deposits: Variability factors and an exploration of cellular composition. Forensic Sci Int Genet 2019; 39:8-18. [DOI: 10.1016/j.fsigen.2018.11.019] [Citation(s) in RCA: 66] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2018] [Revised: 11/14/2018] [Accepted: 11/26/2018] [Indexed: 02/07/2023]
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32
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Gosch A, Courts C. On DNA transfer: The lack and difficulty of systematic research and how to do it better. Forensic Sci Int Genet 2019; 40:24-36. [PMID: 30731249 DOI: 10.1016/j.fsigen.2019.01.012] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2018] [Revised: 12/21/2018] [Accepted: 01/30/2019] [Indexed: 01/07/2023]
Abstract
Since DNA from touched items and surfaces ("touch DNA") can successfully and reliably be analyzed, the question as to how a particular DNA containing sample came to be from where it was recovered is of increasing forensic interest and expert witnesses in court are increasingly challenged to assess for instance whether an incriminatory DNA sample matching to a suspect could have been transferred to the crime scene in an innocent manner and to guess at the probability of such an occurrence. The latter however will frequently entail expressing a subjective probability i.e. simply making a best guess from experience. There is, to the present date, an extensive and complex body of literature on primary, secondary, tertiary and even higher order DNA transfer, its possibility, plausibility, dependency on an array of variables and factors and vast numbers of permutations thereof. However, from our point of view there is a lack of systematic data on DNA transfer with existing research widely varying in quality and relevance. Our aim was, starting from a comprehensive survey of the status quo and appreciating its increasing importance, to in the first part of our review raise consciousness towards the underestimated and insufficiently accounted for complexity of DNA transfer and thus appendant research of forensic scientists serving as expert witnesses in court but also acting in the role of a journal referee to point them to areas of criticism when reviewing a manuscript on DNA transfer. In the second part, we present propositions how to systematize and integrate future research efforts concerning DNA transfer. Also, we present a searchable database providing an extensive overview of the current state of knowledge on DNA transfer, intended to facilitate the identification of relevant studies adding knowledge to a specific question and thus help forensic experts to base their opinion on a broader, more complete and more reproducible selection of studies.
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Affiliation(s)
- Annica Gosch
- Institute of Forensic Medicine, University Hospital of Schleswig-Holstein, Arnold-Heller-Strasse 12, 24105 Kiel, Germany
| | - Cornelius Courts
- Institute of Forensic Medicine, University Hospital of Schleswig-Holstein, Arnold-Heller-Strasse 12, 24105 Kiel, Germany.
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Hefetz I, Einot N, Faerman M, Horowitz M, Almog J. Touch DNA: The effect of the deposition pressure on the quality of latent fingermarks and STR profiles. Forensic Sci Int Genet 2019; 38:105-112. [DOI: 10.1016/j.fsigen.2018.10.016] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2018] [Revised: 09/21/2018] [Accepted: 10/26/2018] [Indexed: 11/27/2022]
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34
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van Oorschot RA, Szkuta B, Meakin GE, Kokshoorn B, Goray M. DNA transfer in forensic science: A review. Forensic Sci Int Genet 2019; 38:140-166. [DOI: 10.1016/j.fsigen.2018.10.014] [Citation(s) in RCA: 128] [Impact Index Per Article: 25.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Revised: 10/19/2018] [Accepted: 10/22/2018] [Indexed: 02/07/2023]
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35
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Cavanaugh SE, Bathrick AS. Direct PCR amplification of forensic touch and other challenging DNA samples: A review. Forensic Sci Int Genet 2018; 32:40-49. [DOI: 10.1016/j.fsigen.2017.10.005] [Citation(s) in RCA: 95] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Revised: 10/11/2017] [Accepted: 10/16/2017] [Indexed: 01/08/2023]
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36
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McColl DL, Harvey ML, van Oorschot RA. DNA transfer by different parts of a hand. FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES 2017. [DOI: 10.1016/j.fsigss.2017.09.014] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/30/2022]
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37
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al Oleiwi A, Hussain I, McWhorter A, Sutton R, King RS. DNA recovery from latent fingermarks treated with an infrared fluorescent fingerprint powder. Forensic Sci Int 2017; 277:e39-e43. [DOI: 10.1016/j.forsciint.2017.05.008] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2016] [Revised: 03/30/2017] [Accepted: 05/10/2017] [Indexed: 11/26/2022]
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38
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Fonneløp AE, Ramse M, Egeland T, Gill P. The implications of shedder status and background DNA on direct and secondary transfer in an attack scenario. Forensic Sci Int Genet 2017; 29:48-60. [DOI: 10.1016/j.fsigen.2017.03.019] [Citation(s) in RCA: 61] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Revised: 03/15/2017] [Accepted: 03/18/2017] [Indexed: 11/27/2022]
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39
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Ostojic L, Wurmbach E. Analysis of fingerprint samples, testing various conditions, for forensic DNA identification. Sci Justice 2017; 57:35-40. [DOI: 10.1016/j.scijus.2016.08.009] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/09/2016] [Revised: 08/25/2016] [Accepted: 08/30/2016] [Indexed: 01/28/2023]
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40
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Goray M, Fowler S, Szkuta B, van Oorschot R. Shedder status—An analysis of self and non-self DNA in multiple handprints deposited by the same individuals over time. Forensic Sci Int Genet 2016; 23:190-196. [DOI: 10.1016/j.fsigen.2016.05.005] [Citation(s) in RCA: 81] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2015] [Revised: 04/14/2016] [Accepted: 05/09/2016] [Indexed: 01/25/2023]
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