Effects of thinning intensity on understory vegetation and soil microbial communities of a mature Chinese pine plantation in the Loess Plateau

Thinning enhances forest soil C storage by shifting the soil toward an oligotrophic condition

Forests are significant carbon reservoirs, with approximately one-third of this carbon stored in the soil. Forest thinning, a prevalent management technique, is designed to enhance timber production, preserve biodiversity, and maintain ecosystem functions. Through its influence on biotic and abiotic factors, thinning can profoundly alter soil carbon storage. Yet, the full implications of thinning on forest soil carbon reservoirs and the mechanisms underpinning these changes remain elusive. In this study, we undertook a two-year monitoring initiative, tracking changes in soil extracellular enzyme activities (EEAs), microbial communities, and other abiotic parameters across four thinning intensities within a temperate pine forest. Our results show a marked increase in soil carbon stock following thinning. However, thinning also led to decreased dissolved organic carbon (DOC) content and a reduced DOC to soil organic carbon (SOC) ratio, pointing toward a decline in soil carbon lability. Additionally, fourier transform infrared spectroscopy (FTIR) analysis revealed an augmented relative abundance of aromatic compounds after thinning. There was also a pronounced increase in absolute EEAs (per gram of dry soil) post-thinning, implying nutrient limitations for soil microbes. Concurrently, the composition of bacterial and fungal communities shifted toward oligotrophic dominance post thinning. Specific EEAs (per gram of soil organic matter) exhibit a significant reduction following thinning, indicating a deceleration in organic matter decomposition rates. In essence, our findings reveal that thinning transitions soil toward an oligotrophic state, dampening organic matter decomposition, and thus bolstering the soil carbon storage potential of forest. This study provides enhanced insights into the nuanced relationship between thinning practices and forest soil carbon dynamics, serving as a robust foundation for enlightened forest management strategies.

Effects of stand density on the structure of soil microbial functional groups in Robinia pseudoacacia plantations in the hilly and gully region of the Loess Plateau, China

Elucidating the responses of soil microbial functional groups to changes in stand density is crucial for understanding the sustainability of forest development. In this study, we obtained soil samples from Robinia pseudoacacia plantations of three different stand densities (low, middle, and high densities of 750, 1125, and 1550 trees ha-1, respectively) in the hilly and gully region of the Loess Plateau, China. We sought to determine the effects of stand density on the structure of soil microbial functional groups. Stand density had no significant effects on species diversity indices of fungal trophic modes or bacterial functional groups involved in carbon (C) cycling and nitrogen (N) cycling. However, differences in stand density substantially altered the composition of fungal functional groups. In low-density plantations, saprophytic fungi were the main trophic mode, with a high relative abundance of ∼62 %, whereas the fungal communities associated with middle- and high-density plantations were dominated by other fungi with a combined trophic mode, which accounted for ∼43 % and ∼41 % of the fungal trophic modes, respectively. Furthermore, we detected increases in the relative abundance of plant pathogens, nitrifiers, and nitrous oxide-denitrifying bacteria with increasing stand density. Results of the Monte Carlo test showed that soil pH influenced the composition of soil fungal (but not bacterial) groups. These findings suggested that a high density of trees might inhibit the decomposition of recalcitrant organic material and stimulate nitrous oxide emission, consequently decreasing soil nutrient availability and stimulating soil N loss. Moreover, high-density stands might increase the potential risk for plant disease. Overall, the present study suggested that reducing stand density to coverage between 750 and 1125 trees ha-1 would increase soil nutrient availability and prevent N loss from the soil. To verify these suppositions, further research is needed to determine the links between microbial functional groups composition and soil biogeochemistry.

Long-term Spartina alterniflora invasion simplified soil seed bank and regenerated community in a coastal marsh wetland

The coastal wetland is easily invaded by alien species due to locating in the land and sea transitional area. As a potential driving regeneration force, the soil seed bank is vital to the community restoration and species diversity protection. To reveal the long-term Spartina alterniflora invasion impact on the soil seed banks and regenerated communities, we investigated the seed banks under the different vegetation types (S. alterniflora, Phragmites australis, Scirpus mariqueter, ruderal and unvegetated site) and soil depths (0-5 and 5-10 cm) in the coastal salt marsh wetland, Chongming island, eastern China. The results showed that the soil seed bank richness and species density under different vegetation types were higher than the aboveground vegetation, and those of 0-5 cm seed banks were higher than 5-10 cm, except for the unvegetated site. The species richness and S. alterniflora seed proportion in the seed banks under S. alterniflora communities (S.AS) were lower and larger respectively than those of other sites. The species composition between S.AS and the aboveground communities showed high similarity with aggregation phylogenetic structures in two soil depths. The seed bank variations at 0-5 and 5-10 cm depths were interpreted 3.03% and 2.25% by the aboveground communities, while 4.92% and 5.55% were interpreted by the soil microbial biomass. The SEM model explained 98.1% and 91.8% of the seed banks richness at the 0-5 cm depth and 5-10 cm depth, respectively, and explained 98.8% and 46.1% of the seed banks species density at the 0-5 cm depth and 5-10 cm depth, respectively. The aboveground vegetation biomass and abundance directly affected the 0-5 cm seed banks richness and species density, while its height and biomass only affected the 5-10 cm seed banks species density. The 0-10 cm soil depth microbial biomass indirectly affected the 0-5 cm seed banks richness and species density, while affected the 5-10 cm seed banks richness. Soil physical and chemical properties only indirectly affected the 0-5 cm seed banks species density. The results provided a reference for the ecological evaluation of the impacts of S. alterniflora invasion into the coastal salt marsh wetland of eastern China, and guidance for the protection and restoration of the native plant communities.

The effect of thinning intensity on the soil carbon pool mediated by soil microbial communities and necromass carbon in coastal zone protected forests

Thinning is a common forest management measure that can effectively maintain the ecological service function of protected forests. However, the effect of thinning on the soil carbon (C) pool remains uncertain. In particular, we lack an understanding of the complete link between thinning and microbial communities, microbial necromass C, and consequently, soil C pools in coastal zone protected forests. In this study, three thinning intensities, i.e., a control treatment (CT, i.e., no thinning), light thinning (LT) and heavy thinning (HT), were established in three types of forests (Quercus acutissima Carruth, Pinus thunbergii Parl and mixed Quercus acutissima Carruth and Pinus thunbergii Parl, i.e., QAC, PTP and QP, respectively). Two years after the completion of thinning, we investigated the changes in the soil organic carbon (SOC) fractions, soil microbial community and soil microbial necromass C in the surface layer (0-20 cm) and thoroughly evaluated the relationship between the potential change in SOC and the microbial community. Compared with CT, there was no change in the SOC content under LT and HT, but thinning conducted in QAC increased the proportion of mineral-associated organic C (MAOC) in SOC. Moreover, both LT and HT reduced the soil carbon lability (CL) in the QAC and QP forests. Different thinning intensities changed the soil microbial community structure, and most of the variation was explained by thinning and the soil physicochemical properties. The proportion of soil bacterial and fungal necromass C to SOC increased with increasing thinning intensity. The content of soil bacterial and fungal necromass C was mainly controlled by the relative abundance of the core phylum (relative abundance>10 %). Thinning affected the soil C pool by affecting the content of soil bacterial and fungal necromass C, but their accumulation pathways was different. The results showed that thinning was beneficial to the stability of SOC. The microbial C pool, total organic C pool and even bacterial and fungal C pools should be distinguished when studying the soil C pool, which can effectively deepen our understanding of the mechanism by which soil microorganisms affect the soil C pool.

Plantations thinning: A meta-analysis of consequences for soil properties and microbial functions

Thinning is a widely-used management practice to reduce tree competition and improve wood production and quality in forest plantations. Thinning affects the soil ecosystem by changing the microclimate and plant growth, as well as litter inputs above and belowground, with all the resulting consequences for microbial communities and functions. Although many case studies have been carried out, a comprehensive understanding of the thinning effects on soil properties and microbial communities and functions in plantations remains to be explored. In this study, a meta-analysis was performed on 533 paired observations based on 90 peer-reviewed articles to evaluate the general responses of soil (mainly 0-20 cm depth) physicochemical properties, microbial biomass and community structure, and enzyme activities to thinning. Results showed that thinning increased soil temperature (13 %), moisture (8.0 %), electric conductivity (13 %), and the contents of total nitrogen (TN, 4.1 %), dissolved organic carbon (DOC, 9.7 %), nitrate N (NO₃^--N, 27 %) and available phosphorous (22 %). For microbial properties, thinning decreased the fungi to bacteria ratio (F:B, -28 %) and the gram-positive bacteria to gram-negative bacteria ratio (G+:G-, -12 %), while increased microbial biomass C (7.1 %), microbial respiration (13 %), and nutrient-cycle related enzyme activities, including phenol oxidase (14 %), cellobiohydrolase (21 %), urease (10 %), and acid phosphatase (9 %). In particular, moderate thinning (30-60 % intensity) has higher conservation benefits for soil C and nutrients than light and heavy intensity, thus being recommended as the optimal thinning activity. This meta-analysis suggests that thinning consistently altered soil properties, shifted microbial community compositions from K- to-r strategist dominance, and stimulated microbial activities. These results are essential for optimizing plantation thinning management and provide evidence for applying the macro-ecology theory to ecosystem disturbance in soil microbial ecology.

The Effects of Shrub Removal on Soil Microbial Communities in Primary Forest, Secondary Forest and Plantation Forest on Changbai Mountain

Shrub removal is a common management method in forest ecosystems, but comparatively little is known regarding the effects of shrub removal on soil microbial communities among primary forest, secondary forest, and plantation forests in temperate forests, which limits our accurate assessment of sustainable management of understory vegetation removal. Given this, we used a long-term operation experiment across a contrasting mixed broadleaved-Pinus koraiensis forest, Betula platyphylla forest, and Larix gmelinii plantation forest to explore the variations of soil properties and microbial community after 5 years of shrub removal on Changbai Mountain, as well as the contribution of the soil properties and understory plant diversity to the soil microbial community. The results demonstrated that shrub removal could significantly alter soil SWC and TN, TP, and AP contents of the L. gmelinii, as well as N/P of B. platyphylla. Moreover, shrub removal also clearly improved soil bacterial Pielou_e index and Simpson index of mixed broadleaved-P. koraiensis and soil bacterial Simpson index of L. gmelinii, and decreased soil fungal Pielou_e index and Shannon index of L. gmelinii and soil bacterial Pielou_e index and soil fungal Shannon index of B. platyphylla. Identically, shrub removal notably altered the soil bacterial community composition. Soil characteristics and understory plant diversity accounted for 48.02% and 26.88%, and 45.88% and 27.57% of the variance in the bacterial and fungal community composition, respectively. This study aimed to provide an important scientific basis for the restoration and sustainable management of temperate forests in the Changbai Mountain region.

Understory vegetation diversity, soil properties and microbial community response to different thinning intensities in Cryptomeria japonica var. sinensis plantations

Introduction

Soil microorganisms are the key factors in elucidating the effects of thinning on tree growth performance, but the effects of vegetation and soil on the species composition and function of soil microorganisms after thinning are still not well elaborated.

Methods

The effects of thinning on understory vegetation diversity, soil physicochemical properties and soil microbial community composition were investigated in a thinning trial plantation of Cryptomeria japonica var. sinensis, including four thinning intensities (control: 0%, LIT: 20%, MIT: 30% and HIT: 40%), and the relationships of the microbial community structure with the understory vegetation diversity and soil properties were assessed.

Results

The results showed that thinning had a greater effect on the diversity of the shrub layer than the herb layer. The soil bulk density and the contents of soil organic matter, total potassium and nitrogen increased with increasing thinning intensities. The Shannon and Chao indices of soil bacteria and fungi were significantly lower in the LIT, MIT and HIT treatments than in the control. Thinning can significantly increase the abundance of Proteobacteria and Actinobacteria, and higher thinning intensities led to a higher relative abundance of Ascomycota and a lower relative abundance of Basidiomycota, Rozellomycota, and Mortierellomycota. Redundancy analysis indicated that soil physicochemical properties rather than understory vegetation diversity were the main drivers of microbial communities, and fungi were more sensitive to soil properties than bacteria. Functional prediction showed that thinning significantly reduced the potential risk of human diseases and plant pathogens, and the nitrogen fixation capacity of bacteria was the highest in the HIT treatment. Thinning significantly increased the relative abundance of cellulolysis and soil saprotrophs in bacteria and fungi.

Conclusion

The findings provide important insights into the effects of thinning on C. japonica var. sinensis plantation ecosystems, which is essential for developing thinning strategies to promote their ecological and economic benefits.

Thinning can increase shrub diversity and decrease herb diversity by regulating light and soil environments

Tree thinning affects the light environment, which in turn affects the growth and survival of understory vegetation, thus improving species diversity and nutrient cycling, as well as the ecological habitat factors. However, the response of understory vegetation to the thinning intensity and short-time effects in the temperate broadleaf-conifer mixed forest is not completely clear. In this study, four permanent plots with a total area of 4 hm² were established in a mixed broadleaf-conifer forest in northeast China, with thinning intensities of 20% (light thinning, LT), 35% (medium thinning, MT), 55% (heavy thinning, HT) and the unthinned plot (CK), respectively, in accordance with the basal area. The responses of species diversity to changes in understory vegetation were conducted by a structural equation model (SEM). The results showed that compared with CK, thinning significantly increased the photosynthetically active radiation (PAR) and the light quality (R/FR) (p < 0.05), while decreased the contents of soil total nitrogen (TN), total phosphorous (TP), organic matter (OM), nitrate nitrogen (NN), ammonia nitrogen (AN) and pH. The degree of fragmentation of light factors among the treatment plots gradually decreased as thinning intensity increased. Among all the thinning treatments, PAR and R/FR were found to be the optimal light condition when the forest thinning intensity was 55%. The light condition was found to have a significant negative correlation with soil TN, TP, OM, and AN. While the soil nutrients were positively correlated with herbaceous layer diversity but negatively correlated with shrub layer diversity. The soil nutrients were lost after thinning in a short time and herb diversity decreased, but shrub diversity increased significantly compared with unthinned plots. For the understory vegetation, the species diversity of shrub and herb layer were showed to be more sensitive to soil nutrients than light environment.

Relationship between the vertical distribution of fine roots and residual soil nitrogen along a gradient of hardwood mixture in a conifer plantation

In forest ecosystems, understanding the relationship between the vertical distribution of fine roots and residual soil nitrogen is essential for clarifying the diversity-productivity-water purification relationship. Vertical distributions of fine-root biomass (FRB) and concentrations of nitrate-nitrogen (NO₃ -N) in soil water were investigated in a conifer plantation with three thinning intensities (Control, Weak and Intensive), in which hardwood abundance and diversity were low, moderate and high, respectively. Intensive thinning led to the lowest NO₃ -N concentration in soil water at all depths (0-100 cm) and highest FRB at shallow depths (0-50 cm). The NO₃ -N concentration at a given depth was negatively correlated with total FRB from the surface to the depth at which NO₃ -N concentration was measured, especially at shallow depths, indicating that more abundant fine roots led to lower levels of downward NO₃ -N leaching. FRB contributed positively to nitrogen content of hardwood leaves. These findings demonstrate that a hardwood mixture in conifer plantations resulted in sufficient uptake of NO₃ -N from soil by well developed fine-root systems, and translocation to canopy foliage. This study suggests that productivity and water purification can be achieved through a hardwood mixture in conifer plantations.

Rhizobacteria communities reshaped by red mud based passivators is vital for reducing soil Cd accumulation in edible amaranth

Red mud (RM) was constantly reported to immobilize soil cadmium (Cd) and reduce Cd uptake by crops, but few studies investigated whether and how RM influenced rhizobacteria communities, which was a vital factor determining Cd bioavailability and plant growth. To address this concern, high-throughput sequencing and bioinformatics were used to analyze microbiological mechanisms underlying RM application reducing Cd accumulation in edible amaranth. Based on multiple statistical models (Detrended correspondence analysis, Bray-Curtis, weighted UniFrac, and Phylogenetic tree), this study found that RM reduced Cd content in plants not only through increasing rhizosphere soil pH, but by reshaping rhizobacteria communities. Special taxa (Alphaproteobacteria, Gammaproteobacteria, Actinobacteriota, and Gemmatimonadota) associated with growth promotion, anti-disease ability, and Cd resistance of plants preferentially colonized in the rhizosphere. Moreover, RM distinctly facilitated soil microbes' proliferation and microbial biofilm formation by up-regulating intracellular organic metabolism pathways and down-regulating cell motility metabolic pathways, and these microbial metabolites/microbial biofilm (e.g., organic acid, carbohydrates, proteins, S^2-, and PO₄^3-) and microbial cells immobilized rhizosphere soil Cd via the biosorption and chemical chelation. This study revealed an important role of reshaped rhizobacteria communities acting in reducing Cd content in plants after RM application.

Effects of Plantation Type and Soil Depth on Microbial Community Structure and Nutrient Cycling Function

Declining soil quality and microecological imbalances were evaluated in larch plantations in this study. One potential solution to this problem is the cultivation of mixed coniferous and broad-leaved plantations. However, it is unclear whether and how soil microbial community structure and nutrient cycling function would be affected by mixed plantations and soil depths. In this study, we used high-throughput sequencing technology to investigate bacterial 16S and fungal ITS regions for comparisons of soil microbial diversity among plantation types (a Larix gmelinii pure plantation, a Fraxinus mandshurica pure plantation, a Larix–Fraxinus mixed plantation within the Larix row, the Fraxinus row, and between the Larix and Fraxinus rows) and soil depths (0–10, 10–20, and 20–40 cm). These data were used to evaluate variations in microbial communities and nutrient cycling function with the determining environmental factors. Our results indicated that bacteria had a stronger spatial dependence than did fungi, while plantation types significantly affected the fungal community. The relative abundance of Gaiellaceae, as well as bacterial ligninolysis, nitrate ammonification, and nitrite ammonification functions significantly increased with increasing soil depth. Compared with other plantations, the relative abundance of Inocybaceae was significantly higher in the Larix plantation. Distance-based redundancy analysis (db-RDA) showed that Gaiellaceae and Inocybaceae abundances were positively correlated with ammonium nitrogen content, available phosphorus content, and phosphatase activity. Our findings indicate that variations in soil available phosphorus are closely related to the relative abundances of Gaiellaceae at different soil depths and Inocybaceae in different plantation types. Mixed plantations might change the availability of soil phosphorus by controlling the relative abundance of Inocybaceae. We recommend that fungal community changes be considered in the sustainable management of mixed plantations.

Changes in Rhizosphere Soil Fungal Communities of Pinus tabuliformis Plantations at Different Development Stages on the Loess Plateau

The soil fungal community is an important factor in the forest ecosystems, and a better understanding of its composition and dynamic changes will contribute to the maintenance, preservation, and sustainable development of the forest ecosystems. Pinus tabuliformis has been widely planted for local ecological restoration on the Loess Plateau in China in recent decades. However, these plantations have been degraded to different degrees with increasing stand age. Hence, we tried to find the possible causes for the plantation degradation by analyzing soil environmental changes and soil fungal community composition at different stand ages. We collected rhizosphere soil samples from young (10-year-old), middle-aged (20-year-old), and near-mature (30-year-old) P. tabuliformis plantations in this region and characterized their soil properties and soil fungal community diversity and composition. Our results showed that with increasing stand age, the contents of organic carbon, ammonium nitrogen (AN) and nitrate nitrogen (NN) in the soil increased significantly, while the content of available phosphorus (AP) decreased significantly. The main factors affecting the composition of the soil fungal community were the contents of AP, AN, and NN in the soil. In addition, the genus Suillus was the dominant ectomycorrhizal (ECM) fungus in all periods of P. tabuliformis plantations in this region. The results of structural equation modeling showed that the community composition of ECM fungi was significantly correlated with stand age, soil NN, and AP contents, and that of pathogenic (PAG) fungi was significantly correlated with soil AN and AP contents. The decrease in the relative abundance of ECM fungi and the increase in the relative abundance of PAG fungi would exacerbate the degradation of P. tabulaeformis plantation. Our results illustrated that the content of soil AP is not only an important factor limiting the development of plantations, but it also significantly affects the community composition of soil fungi in the rhizosphere of the P. tabuliformis plantation. This study provides a novel insight into the degradation of P. tabuliformis plantations and builds a solid foundation for their subsequent management, restoration, and sustainable development on the Loess Plateau of China.

Soil ecoenzymatic stoichiometry reveals microbial phosphorus limitation after vegetation restoration on the Loess Plateau, China

Exploring the limitations of soil microbial nutrient metabolism would help to understand the adaptability and response mechanisms of soil microbes in semi-arid ecosystems. Soil ecoenzymatic stoichiometry is conducive to quantifying the nutrient limitations of microorganisms. To quantify microbial nutrient limitation during plant restoration, we measured soil physicochemical properties, microbial biomass, and the activities of four enzymes (ꞵ-1,4-glucosidase, leucine aminopeptidase, ꞵ-1,4-N-acetylglucosaminidase, and alkaline phosphatase) in the soils of the northern Loess Plateau. Vegetation restoration patterns significantly affected soil properties, microbial biomass, enzymatic activity, and associated stoichiometry. Soil enzymatic activity increased significantly after vegetation restoration, especially in Robinia pseudoacacia plantations (RP). Correlation analysis showed that soil nutrients (C and N), moisture and pH were significantly correlated with ecoenzymatic activities and their stoichiometries. Vector-threshold element ratio (VT) model analysis revealed that microbial nutrient metabolism was limited by P, and soil microbial C limitation was significantly weakened after vegetation restoration, particularly in RP. Correlation analysis indicated that microbial nutrient limitations represented by the VT model were significantly correlated with soil moisture, nutrients, and associated stoichiometry. Therefore, the soil microbial community was mainly limited by P rather than N in vegetation restoration on the Loess Plateau via the VT model, and this limitation was primarily associated with the variation in soil properties. In addition, the soil microbial C limitation was significantly negatively correlated with microbial nutrient (P or N) limitation, which illustrated that soil microbial nutrient metabolism has strong stoichiometric homeostasis.

Effects of Thinning Intensity on Forest Floor and Soil Biochemical Properties in an Aleppo Pine Plantation after 13 Years: Quantity but Also Quality Matters

In order to quantify the impacts of silvicultural treatments in semiarid forests, it is necessary to know how they affect key aboveground processes and also properties characterizing the forest floor and mineral soil compartments. The general objective of this work is to study the mid-term effects of thinning intensity on forest floor and soil properties after 13 years following the intervention. The experimental design consisted of a randomized block design with four thinning treatments (3 thinning intensity plots plus a control or unmanaged plot) and three blocks or replicates. Several determinations, such as total organic carbon, dissolved organic carbon, or basal respiration, were performed for characterizing forest floor and mineral soil by considering three random sampling points per experimental plot. Thirteen years after thinning, total organic content, the different organic carbon fractions studied, and basal respiration were higher in the forest floor of the unmanaged plot. These results, however, were contrasted to those obtained for the mineral soil, where significant differences between the treatments were only observed in basal respiration and C/N ratio, while the different organic carbon fractions were not affected by thinning intensity. Our results suggest better soil quality where biological activity is enhanced as a consequence of improved environmental conditions and also litterfall input. The latter is especially important in forests with tree leaves of low biodegradability, where new understorey species promoted by thinning can provide higher nutrient availability for the remaining trees and, therefore, better forest resilience.

A global synthesis reveals increases in soil greenhouse gas emissions under forest thinning

Forest thinning is a major forest management practice worldwide and may lead to profound alterations in the fluxes of soil greenhouse gases (GHGs). However, the global patterns and underlying mechanisms of soil GHG fluxes in response to forest thinning remain poorly understood. Here, we conducted a global meta-analysis of 106 studies to assess the effects of forest thinning on soil GHG fluxes and the underpinning mechanisms. The results showed that forest thinning significantly increased soil CO₂ emission (mean lnRR: 0.07, 95% CI: 0.03-0.11), N₂O emission (mean lnRR: 0.39, 95% CI: 0.16-0.61) and decreased CH₄ uptake (mean Hedges' d: 0.98, 95% CI: 0.32-1.64). Furthermore, the negative response of soil CH₄ uptake was amplified by thinning intensity, and the positive response of soil N₂O emission decreased with recovery time after thinning. The response of soil CO₂ emission was mainly correlated with changes in fine root biomass and soil nitrogen content, and the response of soil CH₄ uptake was related to the changes in soil moisture and litterfall. Moreover, the response of soil N₂O emission was associated with changes in soil temperature and soil nitrate nitrogen content. Thinning also increased the total balance of the three greenhouse gas fluxes in combination, which decreased with recovery time. Our findings highlight that thinning significantly increases soil GHG emissions, which is crucial to understanding and predicting ecosystem-climate feedbacks in managed forests.

Effects of Elevation and Distance from Highway on the Abundance and Community Structure of Bacteria in Soil along Qinghai-Tibet Highway

In recent years, highway construction in the Qinghai-Tibet Plateau (QTP) has developed rapidly. When the highway passes through grassland, the soil, vegetation, and ecological environment along the line are disturbed. However, the impact on soil bacteria is still unclear. Soil bacteria play an important role in the ecological environment. The Qinghai-Tibet Highway (QTH) was selected as the research object to explore the changes in bacterial community structure, vegetation, soil, and other indicators. The results showed that the highway-related activities increased the degradation of vegetation along the road, significantly changed the physical and chemical properties of soil, and caused heavy metal pollution. These environmental factors affected the diversity and community structure of soil bacteria. This kind of disturbance shows a trend of gradually increasing from near to far from the highway. Gemmatimonas, Terrimonas, Nitrospira and Bacillus are more tolerant to environmental changes along the highway, while Barnesiella, and Blastococcus are more sensitive. The content of nitrate decreased and the content of ammonium nitrogen increased in the disturbed area, increasing the abundance of nitrifying bacteria. Therefore, the main factor of the disturbance of the QTH on the grassland is the decline of soil nutrient content, and the supplement of soil nutrients such as carbon and nitrogen should be taken into account in the process of ecological restoration of grassland along the line.

Variation in fine root traits with thinning intensity in a Chinese fir plantation insights from branching order and functional groups

Thinning is a widely used practice in forest management, but the acclimation mechanisms of fine roots to forest thinning are still unclear. We examined the variations in fine root traits of different branching orders and functional groups along a thinning intensity gradient in a 26-year-old Chinese fir (Cunninghamia lanceolata) plantation. With increasing thinning intensity, the root C concentration (RCC), root N concentration (RNC), specific root area (SRA), and specific root length (SRL) of the absorptive roots (the first two orders) significantly decreased, while root abundance (root biomass and root length density) and root tissue density (RTD) significantly increased. Fifty-four percent of the variation in the absorptive root traits could be explained by the soil N concentration and the biomass and diversity of the understorey vegetation. Conversely, transport root (third- and higher-order) traits did not vary significantly among different thinning intensities. The covariation of absorptive root traits across thinning intensities regarding two dimensions was as follows: the first dimension (46% of the total variation) represented changes in root abundance and chemical traits (related to RCC, RNC), belonging to an extensive foraging strategy; the second dimension (41% of the total variation) represented variations in root morphological traits (related to RTD, SRL and SRA), which is an intensive foraging strategy (i.e., root economic spectrum). These results suggested that the absorptive roots of Chinese fir adopt two-dimensional strategies to acclimate to the altered surroundings after thinning.

Soil Ventilation Benefited Strawberry Growth via Microbial Communities and Nutrient Cycling Under High-Density Planting

In order to increase O₂ concentration in the rhizosphere and reduce the continuous cropping obstacles under high-density cultivation, ventilation is often used to increase soil aeration. Yet, the effect of ventilation on soil microbial communities and nutrient cycling and, further, the extent to which they influence strawberry growth under greenhouse conditions are still poorly understood. Thus, four treatments—no ventilation + low planting density (LD), ventilation + LD, no ventilation + high planting density (HD), and ventilation + HD—of strawberry “Red cheeks” (Fragaria × ananassa Duch. cv. “Benihopp”) were studied in a greenhouse for 3 years. The ventilation pipe (diameter = 10 cm) was buried in the soil at a depth of 15 cm from the surface and fresh air was sent to the root zone through the pipe by a blower. Ten pipes (one pipeline in a row) were attached to a blower. Soil samples were collected using a stainless-steel corer (five-point intra-row sampling) for the nutrient and microbial analyses. The composition and structure of the soil bacterial and fungal communities were analyzed by high-throughput sequencing of the 16S and 18S rRNA genes, and functional profiles were predicted using PICRUSt and FUNGuild, respectively. The results showed that soil ventilation increased the net photosynthetic rate (Pn), transpiration rate (Tr), and water use efficiency (WUE) of strawberry plants across two growth stages [vegetative growth stage (VGS) and fruit development stage (FDS)]. Soil ventilation increased its available nutrient contents, but the available nutrient contents were reduced under the high planting density compared with low planting density. Both the O₂ concentration and O₂:CO₂ ratio were increased by ventilation; these were positively correlated with the relative abundance of Bacilli, Gamma-proteobacteria, Blastocatella, as well as Chytridiomycota and Pezizomycetes. Conversely, ventilation decreased soil CO₂ concentration and the abundance of Beta-proteobacteria and Gemmatimonadetes. The greater planting density increased the relative abundance of Acidobacteria (oligotrophic group). Ventilation altered soil temperature and pH along with carbon and nitrogen functional profiles in the VGS (more nitrogen components) and FDS (more carbon components), which benefited strawberry plant growth under high planting density. The practice of soil ventilation provides a strategy to alleviate hypoxia stress and continuous cropping obstacles for improving crop production in greenhouse settings.

Differential Responses of Soil Bacterial and Fungal Community to Short-Term Crop Tree Management in a Larix gmelinii Plantation

Crop tree management (CTM) is a widely applicable silviculture technology that is used to improve the performance of individual trees. However, only little information is available about the effects of the CTM regime on the soil microbial community structure. We conducted a study to explore the effects of short-term (five years) CTM on the soil bacterial and fungal diversity, community composition, and structure in the 0–10 cm soil layer in a Larix gmelinii (Rupr.) Kuzen. plantation. We set out to investigate the differential response of bacterial and fungal communities to variations in soil properties mediated by short-term CTM. Compared with the control plots, the soil microbial biomass carbon and microbial biomass nitrogen in CTM increased significantly by 64.2% and 32.3%, respectively. CTM significantly promoted the content of soil organic carbon, dissolved organic carbon, and nitrate nitrogen, and reduced the content of dissolved organic nitrogen. CTM changed the Shannon and Simpson indices of soil fungi to a remarkable extent but had little effect on the α diversity of bacterial communities. The bacterial β diversity was more sensitive to CTM than fungi. The relative abundance of Verrucomicrobiae (the dominant class of soil bacteria) in CTM was significantly increased by 78.2%, while the relative abundance of Agaricomycetes (dominant class for soil fungi) was reduced by 43.3%. We observed a significantly increased number of unique OTUs for soil fungi in the CTM plots. Redundancy analysis showed that dissolved organic carbon, soil moisture, and total phosphorus content significantly affected the composition of bacterial communities, while soil dissolved organic nitrogen, C/N, and total phosphorus drove the high variation in fungal community composition. Overall, our results emphasize the divergent response of soil bacterial and fungal communities in Larix gmelinii plantations to short-term CTM. We must pay more attention to the functional role of soil microbiota in future forest management.

Forest management practices of Pinus tabulaeformis plantations alter soil organic carbon stability by adjusting microbial characteristics on the Loess Plateau of China

Sustainable management practices can enhance the capacity and potential for soil carbon (C) sequestration, significantly contributing towards mitigating regional climate change. Here, we investigated how the microbial characteristics of a Pinus tabulaeformis plantation responded to different management practices to identify the role of microbial characteristics in influencing the stability of soil organic carbon (SOC). We chose a Pinus tabulaeformis plantation on the Loess Plateau where forest management practices had been conducted since 1999. Five forest management practices were implemented: two at the forest level (P. tabulaeformis with and without ground litter), and three using different vegetation restoration approaches after clear-cutting (P. tabulaeformis seedlings, abandoned grassland, and natural shrub regeneration). Microbial biomass, soil respiration, microbial community structure, microbial metabolic function, and soil oxidizable organic carbon (OC) fractions were evaluated. Forest management practices changed SOC stability by adjusting the microbial characteristics (e.g. soil microbial community diversity and microbial metabolic function diversity). The result of path analysis was that the direct path coefficient of microbial biomass on soil oxidizable OC fractions was the largest, which was 1.499. Path analysis and redundancy analysis showed that microbial biomass had the largest direct influence on soil oxidizable OC fractions. Compared with other forest management practices, natural shrub regeneration increased the nonlabile carbon fraction by increasing soil microbial characteristics, and contributed the most towards stabilizing SOC, which enhanced the stability of the soil ecosystem on the plateau. In conclusion, microbial biomass was the biggest influence factor of SOC stability. In contrast, the stability of SOC may be most stable in the area of natural shrub regeneration.

Depression of the soil arbuscular mycorrhizal fungal community by the canopy gaps in a Japanese cedar (Cryptomeria japonica) plantation on Lushan Mountain, subtropical China

Both canopy gaps (CG) and arbuscular mycorrhizal fungi (AMF) play key roles in seedling establishment and increasing species diversity in forests. The response of AMF to canopy gaps is poorly understood. To assess the long-term effects of canopy gaps on soil AMF community, we sampled soil from plots in a 50-year Cryptomeria japonica (L.f.) D. Don. plantation, located in Lushan Mountain, subtropical China. We analyzed the AMF community, identified through 454 pyrosequencing, in soil and edaphic characteristics. Both richness and diversity of AMF in CG decreased significantly compared to the closed canopy (CC). The differences of the AMF community composition between CG and CC was also significant. The sharp response of the AMF community appears to be largely driven by vegetation transformation. Soil nutrient content also influenced some taxa, e.g., the low availability of phosphorus increased the abundance of Acaulospora. These results demonstrated that the formation of canopy gaps can depress AMF richness and alter the AMF community, which supported the plant investment hypothesis and accentuated the vital role of AMF-plant symbioses in forest management.

Short-Term Thinning Influences the Rhizosphere Fungal Community Assembly of Pinus massoniana by Altering the Understory Vegetation Diversity

Thinning can significantly promote forest productivity and ecological function. Rhizosphere fungi play an indispensable role in regulating nutrient cycling between plants and the environment, and their community composition can positively respond to anthropogenic disturbance. However, the initial effects of thinning on rhizosphere fungal community assembly have seldom been reported. In this research, we studied the alterations in the rhizosphere fungal communities of 29-year-old Pinus massoniana in East Sichuan 2 years after three different thinning intensity treatments. In addition, the responses of fungal community and functional group composition to alterations in understory vegetation and soil physiochemical properties were analyzed. Three thinning intensities were set, which were 0 (CK), 25% (LIT), and 50% (HIT), respectively. The results suggested that the richness index and Shannon index of understory vegetation increased significantly with increasing thinning intensity. The alpha diversity indices of rhizosphere fungal community and soil physiochemical properties did not show significant differences among the three treatments. The relative abundances of 17 fungal indicator species varied regularly with increasing thinning intensity, and most of them belong to Hypocreales and Eurotiales, indicating that these two orders were potential indicators for different thinning treatments. Rhizosphere fungal community assembly was determined by deterministic process, and it was driven by the diversity of understory vegetation in the initial stage of thinning. The Simpson index and Pielou index of herbs were useful measures of the main environmental factors driving the differentiation of fungal functional group composition. Based on network analysis, thinning resulted in distinct co-occurrence patterns of rhizosphere fungal functional groups. This research elucidates the initial role of thinning in rhizosphere fungal community assembly of P. massoniana and has practical significance for the functional restoration and protection of local forest ecosystem.

Soil Bacterial Community Structure in Turfy Swamp and Its Response to Highway Disturbance

In recent years, the construction and development of highways in turfy swamp areas has been very common. When highways pass through turfy swamps, they can change the local soil, vegetation and hydrological environment, but the impact on soil microorganisms is unclear. We studied the impact of highways on soil microbial communities and diversity in three turfy swamps. Soil samples were collected in the affected area (distance from the expressway 10 m) and control area (distance from the expressway 500–1000 m), and the soil properties, heavy metal content and microbial composition were measured. Subsequent statistical analysis showed that soil organic carbon (SOC), total nitrogen (TN), Cd, Cr, Zn, Cu, density and especially water table (WT) are the main driving forces affecting the composition of microorganisms. The WT and density can also be used to predict the change trend of the ratio of proteobacteria to acid bacteria, reflecting the soil nutrient status. In general, the composition of soil microorganisms in turfy swamp is mainly affected by road drainage and heavy metal emissions. This research provides new insights into the impact of highways on turfy swamps from the perspective of bacterial diversity and community composition, and it also provides a basis for the restoration of the wetland ecological environment.

Soil Fungal Communities under Pinus patula Schiede ex Schltdl. & Cham. Plantation Forests of Different Ages in Ethiopia

The cultivation of plantation forests is likely to change the diversity and composition of soil fungal communities. At present, there is scant information about these communities in Ethiopian plantation forest systems. We assessed the soil fungal communities in Pinus patula Schiede ex Schltdl. & Cham. stands aged 5, 11, or 36-years-old using DNA metabarcoding of ITS2 amplicons. The ecological conditions of each plot, such as climate, altitude, and soil, were similar. Stand age and soil fertility influenced soil fungal species diversity and ecological guilds. In total, 2262 fungal operational taxonomic units were identified, of which 2% were ectomycorrhizal (ECM). The diversity of ECM fungi was higher in the 5 and 36-year-old stands than in the 11-year-old P. patula stands. Contrary to our expectations, a high level of ECM species diversity was observed in young stands, suggesting that these ECM species could compensate for the effects of nutrient stress in these stands. Our results also suggested that the abundance of plant pathogens and saprotrophs was not affected by stand age. This study provides baseline information about fungal community changes across tree stands of different ages in P. patula plantations in Ethiopia that are likely related to ECM fungi in young stands where relatively low soil fertility prevails. However, given that the plots were established in a single stand for each age class for each treatment, this study should be considered as a case study and, therefore, caution should be exercised when applying the conclusions to other stands.

Thinning Partially Mitigates the Impact of Atlantic Forest Replacement by Pine Monocultures on the Soil Microbiome

Forest replacement by exotic plantations drive important changes at the level of the overstory, understory and forest floor. In the Atlantic Forest of northern Argentina, large areas have been replaced by loblolly pine (Pinus taeda L.) monocultures. Plant and litter transformation, together with harvesting operations, change microclimatic conditions and edaphic properties. Management practices such as thinning promote the development of native understory vegetation and could counterbalance negative effects of forest replacement on soil. Here, the effects of pine plantations and thinning on physical, chemical and microbiological soil properties were assessed. Bacterial, archaeal, and fungal community structure were analyzed using a metabarcoding approach targeting ribosomal markers. Forest replacement and, to a lesser extent, thinning practices in the pine plantations induced significant changes in soil physico-chemical properties and associated shifts in bacterial and fungal communities. Most measured physical and chemical properties were altered due to forest replacement, but a few of these properties reached values similar to natural forests under the thinning operation. Fungal alpha diversity decreased in pine plantations, whereas bacterial alpha diversity tended to increase but with little statistical support. Shifts in community composition were observed for both fungal and bacterial domains, and were mostly related to changes in plant understory composition, soil carbon, organic matter, water content, pH and bulk density. Among several other changes, highly abundant phyla such as Proteobacteria (driven by many genera) and Mortierellomycota (mainly driven by Mortierella) decreased in relative abundance in the plantations, whereas Acidobacteria (mainly driven by Acidothermus and Candidatus Koribacter) and Basidiomycota (mainly driven by the ectomycorrhiza Russula) showed the opposite response. Taken together, these results provide insights into the effects of forest replacement on belowground properties and elucidate the potentially beneficial effect of thinning practices in intensive plantation systems through promoting the understory development. Although thinning did not entirely counterbalance the effects of forest replacement on physical, chemical and biological soil properties, the strategy helped mitigating the effects and might promote resilience of these properties by the end of the rotation cycle, if subsequent management practices compatible with the development of a native understory vegetation are applied.

Responses of Soil Microbial Community Composition and Enzyme Activities to Land-Use Change in the Eastern Tibetan Plateau, China

The land-use change is a major determinant influencing ecosystem carbon (C) patterns and nutrient cycling in subalpine forests in the Eastern Tibetan Plateau. While some results have been obtained in relation to the influence of land-use change on aboveground components, less is known about the belowground microbial communities and related processes. We assessed the structure and function of soil microbial communities following land-use change from old-growth forest (OF) to secondary forest (SF), plantation forest (PF), and grassland (GL) in the Eastern Tibetan Plateau, China. Phospholipid fatty acid profiles and enzyme activity analysis were used to determine the composition and activities of microbial communities, respectively. Significant differences in physicochemical characteristics, microbial communities, and extracellular enzyme activities in soils under different land uses were observed in this study. pH and total nitrogen (TN) in OF and SF were significantly higher than in GL. PF showed the highest soil organic C (SOC), and significantly higher than in GL. Total phosphorus (TP) and C/N ratio in PF were significantly higher than the other land-use types. OF and PF had significantly higher anaerobic bacteria than in GL. The actinobacteria in SF was significantly higher than in PF. The saprotrophic and ectomycorrhizal (SEM) fungi was significantly lower in GL than the other land-use types. Total microbial biomass and β-glucosidase activities were significantly higher in OF and SF than in GL. GL had significantly higher polyphenoloxidase activities than in OF and PF. Anaerobic bacteria, arbuscular mycorrhizal fungi and SEM fungi were positively correlated with SOC and TP, Gram+ bacteria were correlated with C/P and N/P ratio. N-acetylglucosaminidase activity was negatively correlated with anaerobic bacteria, while polyphenoloxidase activity was positively related to actinobacteria. Furthermore, redundancy analysis revealed that the microbial community composition was primarily regulated by TN and pH. This suggested that altered land-use type initiated changes in the physicochemical characteristics of the soils, which affected the composition of microbial communities and microbial enzyme activities related to nutrient cycling in this area. This provides a scientific basis for the influence mechanism of land use on composition and function of microbial communities, as well as the rational utilization and management of land resources.

Slope Position Rather Than Thinning Intensity Affects Arbuscular Mycorrhizal Fungi (AMF) Community in Chinese Fir Plantations

Background and Objectives: Arbuscular mycorrhizal fungi (AMF) play a crucial role in individual plant capability and whole ecosystem sustainability. Chinese fir, one of the most widely planted tree species in southern China, forms associations with AMF. However, it is still unclear what impacts thinning management applied to Chinese fir plantations has on the structure and diversity of soil AMF communities. This research attempts to bridge this knowledge gap. Materials and Methods: A thinning experiment was designed on different slope positions in Chinese fir plantations to examine the impacts of slope position and thinning intensity on colonization, diversity, and community composition of AMF. Results: Our research showed that the altitudinal slope position had significant effects on colonization, diversity, and community composition of AMF in Chinese fir plantations. In addition, the interaction between slope position and thinning intensity had significant effects on AMF diversity. Colonization by AMF on the lower slope position was significantly higher than on the upper slope position, while AMF diversity on the upper slope position was higher than on the middle and lower slope positions. Glomus was the most abundant genus in all slope positions, especially on the middle and lower slope positions. The relative abundance of Diversispora was significantly different among slope positions with absolute dominance on the upper slope position. Scutellospora was uniquely found on the upper slope position. Furthermore, soil Mg and Mn contents and soil temperature positively affected AMF community composition at the operational taxonomic unit (OTU) level. Conclusions: These findings suggested that slope position should be considered in the management of Chinese fir plantations. Furthermore, both chemical fertilization and AMF augmentation should be undertaken on upper hill slope positions as part of sustainable management practices for Chinese fir plantations.

Short-term effects of thinning on the development and communities of understory vegetation of Chinese fir plantations in Southeastern China

Background

High-density conditions are global issues that threaten the sustainable management of plantations throughout the world. Monocultures and untimely management practices have identically resulted in the simplex of community structures, decreases in biodiversity, and long-term productivity losses in plantations China. The most popular measure which is commonly used to address these issues is thinning, which potentially results in increases in the development of understory plants in plantations. However, there is limited information currently available regarding the community composition of understory vegetation and the associated environmental factors, which has limited the sustainable management of China’s fir plantation ecosystems.

Method

In the present study, a thinning experiment was implemented which included a control check (CK: no thinning), as well as low intensity thinning (LIT: 20%), moderate intensity thinning (MIT: 33%), and high intensity thinning (HIT: 50%) in Chinese fir plantations located in the Southeastern China. During the investigation process, the understory vegetation examined three years after thinning measures were completed, in order to analyze the impacts of different thinning intensities on the growth and community composition of the understory plants. At the same time, the associated environmental factors in the fir plantations were also investigated.

Results

The species richness, total coverage, and biomass of the understory vegetation were observed to be apparently increased with increasing thinning intensity. In addition, it was found that the thinning measures had prominently influenced the soil nutrients. The community compositions of the understory vegetation were significantly different among the four thinning intensity levels, especially between the CK and the HIT. Furthermore, the development of the understory vegetation was found to be significantly correlated with the soil nutrient contents, and the community compositions of the understory vegetation were prominently driven by the tree densities, slope positions, and soil nutrient contents.

Dynamics of bacterial community in litter and soil along a chronosequence of Robinia pseudoacacia plantations

As the driver of plantation ecosystem function, microorganisms can decompose plant residues and soil organic matter. To identify dynamics of microbial communities in litter and soil and its influence by vegetation and soil at regional scales, the plantations of Robinia pseudoacacia at different successional stages (13, 19, 29, and 44 y) was selected on the Loess Plateau. High-throughput sequencing of the 16S rRNA gene was used to examine bacterial communities in litter and soil, and changes in vegetation, litter, and soil characteristics were analyzed. With increase of stand age, coverage and biomass of understory vegetation increased significantly and peaked at 44-y. Concentrations of carbon (C), nitrogen (N), and phosphorus (P) in litter and soil increased significantly, whereas pH values decreased significantly. Composition and diversity of bacterial communities in litter and soil were significantly different. Diversity and richness of litter bacterial communities were higher than that of soils. Relative abundances of Actinobacteria and Proteobacteria in litter were higher than that in soil; relative abundance of Acidobacteria exhibited the reverse trend. The diversity and richness index of vegetation significantly affected that of litter bacterial communities. Soil C/P significantly affected the Simpson and Shannon index of soil bacterial communities. The C/P and pH of litter and soil were significantly correlated with bacterial composition, primarily including Actinobacteria, Acidobacteria, and Gemmatimonadetes. Diversity of litter bacterial communities was more sensitive to the diversity and richness of vegetation flora than that of soil in the succession of R. pseudoacacia. Canopy density, vegetation, and litter and soil nutrients might directly or indirectly affect bacterial communities. Carbon, phosphorus, and pH may be critical factors influencing the composition of bacterial communities in litter and soil.

Temporal Effects of Thinning on the Leaf C:N:P Stoichiometry of Regenerated Broadleaved Trees in Larch Plantations

The shift from natural mixed broadleaved forests to pure coniferous plantations results in soil degradation and the unsustainable development of plantations due to the simple stand structure and low species diversity. Thinning can practically sustain the forest structure and promote the regeneration and growth of broadleaved trees in these pure coniferous plantations. The growth of regenerated broadleaved trees is closely related to leaf ecological stoichiometry, which is strongly restricted by environmental factors such as light, soil moisture, and nutrients after thinning. However, the temporal effects of thinning on leaf C:N:P stoichiometry are still not well understood, which constrains our understanding of implementing thinning in coniferous plantations to promote the regeneration and growth of broadleaved species, and further forming the mixed larch-broadleaf forests. Here, we compared canopy openness (i.e., light availability) and the soil and leaf stoichiometry for regenerated broadleaved trees in larch (Larix keampferi) plantations in short-term (1–3 years), medium-term (4–9 years), and long-term (≥10 years) periods after thinning, taking natural mixed broadleaved forests as a control in Northeast China. The results showed that the temporal effects of thinning were not significant with respect to soil C concentrations, but significant with respect to soil C:P and N:P ratios. The regenerated broadleaved trees adjusted their leaf N concentrations and C:N ratios in response to the changed environmental conditions after thinning over time. The responses of soil and leaf stoichiometry to thinning and their significant correlation indicated a strong interaction between the soil and understory regeneration following thinning. Thus, thinning affects the soil and leaf stoichiometry of regenerated trees over time. These findings provide new insights into the conversion of pure coniferous plantations into mixed larch-broadleaf forests by controlling thinning intervals.

Effects of Thinning on Microbial Community Structure in the Organic Horizon of Chinese Pine Plantations in Badaling, Beijing, China

Research Highlights: Moderate thinning can effectively improve forestry production and change the microenvironment of understory vegetation. Background and Objectives: Microbial communities control the decomposition and transformation of forest organic matter; however, the influence of thinning on microbes in the organic horizon remains unclear. Materials and Methods: In this study, we subjected four plots of Chinese pine plantations in Badaling, Beijing to different thinning intensities, including no thinning (T0), low-intensity thinning (T10), medium-intensity thinning (T20), and high-intensity thinning (T50). The changes in chemical properties and microbial community compositions observed in the organic horizon, which comprised undecomposed litter (L layer) and half-decomposed litter (F layer), were analyzed after thinning. Microbial community compositions were evaluated using phospholipid fatty acid (PLFA) methods. Results: The results showed that the abundances of gram-negative bacteria (GN) and total bacteria (B) under the T10 thinning condition were the highest among the four thinning intensities, and the abundance of arbuscular mycorrhizal fungi (AMF) in T20 was higher than under other thinning intensities. The abundance of gram-positive bacteria (GP) and actinobacteria (ACT) in T10 was lower than in both T0 and T50. The abundance of total PLFAs and fungi (FU) was higher in the L layer, whereas the abundance of GP, GN, B, ACT, and AMF was higher in the F layer. Conclusions: Our results demonstrated that the L layer better reflects the influence of thinning on litter. Redundancy analysis (RDA) results indicated that the organic carbon (LOC) , dissolved organic carbon (DOC), and ammonium nitrogen (NH4+-N)contents of litter were primarily responsible for the observed changes in microbial community structure, with LOC alone explaining 62.6% of the total variance among the litter substrate factors selected. Overall, moderate-intensity thinning of Pinus tabulaeformis Carr. plantations created more favorable conditions for microbial communities in the organic horizon.

The Effect of Forest Thinning on Soil Microbial Community Structure and Function

Microbial communities and their associated enzyme activities play key roles in carbon cycling in ecosystems. Forest thinning is likely to change the soil properties and feedbacks on the structure and function of microbial communities, consequently affecting microbial regulation on the soil carbon process. However, few studies have focused on the mechanism of how thinning affects the quantity and stability of soil carbon. To reveal the influence of thinning on soil carbon and to explore the regulated key factors, this study was conducted in a pure Larix principis-rupprechtii Mayr plantation with different thinning intensity (light, medium, and high) in Shanxi province, China. Soil properties (soil pH, soil water content, soil organic carbon, and soil microbial biomass carbon) were measured. Meanwhile, soil microbial communities were examined with the method of phospholipid fatty acid (PLFA), and soil enzyme activities were measured as indicators of soil microbial functions. The results showed that medium and high thinning has positive effects on soil organic carbon, microbial biomass carbon, soil microbial abundance, and soil enzyme activities. Actinomycetes and gram-negative bacteria were the major factors to affect soil microbial community function relating to carbon decomposition. Soil pH contributed to actinomycetes and gram-negative bacteria through direct influences on arbuscular mycorrhizal fungi. Moreover, there were strong correlations between soil pH and microbial community to control soil carbon turnover. The increasing of soil microbial abundance and the microbial regulation on soil carbon in forest thinning need to be considered for sustainable forest management practices in northern China.

When drought meets forest management: Effects on the soil microbial community of a Holm oak forest ecosystem

The growth and survival of plants in semiarid Mediterranean forests can be improved through the benefits conferred by thinning, a forest management practice that removes trees and reduces the competition between the remaining ones. Here, we evaluate the impacts of induced drought (the exclusion of 25% of the natural rainfall for 5 years) and thinning, and their interaction, with the objective of determining whether the thinning of Holm oak (Quercus ilex L.) modulates the resistance of the soil microbial community to drought. Sequencing of 16S rRNA and ITS amplicons revealed that drought, thinning, and their interaction influenced the composition of the bacterial community, while the fungal community was exclusively affected by thinning. Thinning consisted of the removal of the aboveground parts of the Holm oak trees, which were thereafter left in forest stand. Thinning contributed to the C and N contents, with parallel increases in microbial biomass, particularly in summer. Drought increased the amounts of total organic C and total N, likely due to the reduced enzyme activities. Indeed, the composition of the bacterial community was modulated primarily by the indirect and long-term effects of drought - the accumulation of soil organic matter - rather than by the direct effect of the lower water content imposed by the drought treatments. Thinning under drought conditions did not increase soil organic C (SOC) content. However, the resistance of the soil microbial community to drought was fostered by thinning, particularly at the functional level, as indicated by the enzyme activities related to C, N and P cycles. These responses were associated to variations in the composition of the microbial communities in thinned, drought-exposed plots, in comparison to unthinned, drought-exposed plots. In conclusion, the interaction between forest management and drought influenced the soil microbial community of a Holm oak-dominated Mediterranean ecosystem.

Microbial biomass and enzymatic responses to temperate oak and larch forest thinning: Influential factors for the site-specific changes

Microbial biomass and enzyme activity are essential for ecosystem function in managed forests; however, uncertainty remains because microbial biomass and enzymatic responses to thinning highly differ with case studies. This study addressed the drivers for the site-specific responses of microbial biomass and enzyme activity to thinning. Study sites included two oak and three larch forests; each had un-thinned control, intermediate thinning (15-23% basal area reduction), and heavy thinning treatments (30-44% basal area reduction). Soil properties (temperature, water content, pH, total and inorganic nitrogen, and total carbon/nitrogen ratio), microbial biomass, enzyme (β-glucosidase, N-acetylglucosaminidase, leucyl aminopeptidase, acid phosphatase, and phenol oxidase) activity, and soil carbon storage were determined 6 years after thinning. Compared to the control, microbial biomass carbon and nitrogen were higher under the intermediate and the heavy thinning by 13.9 and 24.4% and 11.5 and 29.9% at one oak forests, respectively, and higher under the intermediate thinning by 53.7 and 70.7% at one larch forests. There were the post-thinning changes in leucyl aminopeptidase activity by -46.9% and by 150.0-210.0% at an oak and larch forest, respectively, acid phosphatase activity by 60.0% at one oak forest, and phenol oxidase activity by 355.0% at one oak forest. The effect sizes of thinning for soil properties explained 94% and 77% of variance of the effect sizes for microbial biomass and enzyme activity. Especially, the effect sizes for soil water content, NH₄⁺, total carbon/nitrogen ratio, and temperature were the most influential. Furthermore, the effect size for soil carbon storage was parabolically related to the effect size for microbial biomass carbon (R² = 0.66). These findings highlight that inconsistent thinning effects on soil properties varied microbial biomass and enzymatic responses to thinning, which differentiated the change in soil carbon storage across sites. Future studies should consider such inconsistencies when examining the effects of forest management.

Short-Term Effects of Different Forest Management Methods on Soil Microbial Communities of a Natural Quercus aliena var. acuteserrata Forest in Xiaolongshan, China

One of the aims of sustainable forest management is to preserve the diversity and resilience of ecosystems. Unfortunately, changes in the soil microbial communities after forest management remain unclear. We analyzed and compared the soil microbial community of a natural Quercus aliena var. acuteserrata forest after four years of four different management methods using high-throughput sequencing technology. The forest management methods were close-to-nature management (CNFM), structure-based forest management (SBFM), secondary forest comprehensive silviculture (SFCS) and unmanaged control (CK). The results showed that: (1) the soil microbial community diversity indices were not significantly different among the different management methods. (2) The relative abundance of Proteobacteria in the SBFM treatment was lower than in the CK treatment, while the relative abundance of Acidobacteria in the SBFM was significantly higher than that in the CK treatment. The relative abundance of Ascomycota was highest in the CNFM treatment, and that of Basidiomycota was lowest in the CNFM treatment. However, the relative abundance of dominant bacterial and fungal phyla was not significantly different in CK and SFCS. (3) Redundancy analysis (RDA) showed that the soil organic matter (SOM), total nitrogen (TN), and available nitrogen (AN) significantly correlated with the bacterial communities, and the available potassium (AK) was the only soil nutrient, which significantly correlated with the composition of the fungal communities. The short-term SBFM treatment altered microbial bacterial community compositions, which may be attributed to the phyla present (e.g., Proteobacteria and Acidobacteria), and the short-term CNFM treatment altered microbial fungal community compositions, which may be attributed to the phyla present (e.g., Ascomycota and Basidiomycota). Furthermore, soil nutrients could affect the dominant soil microbial communities, and its influence was greater on the bacterial community than on the fungal community.

Effect of Thinning on the Spatial Structure of a Larix gmelinii Rupr. Secondary Forest in the Greater Khingan Mountains

Thinning is an important way to adjust and optimize the spatial structure of forests. The study of its impacts support a better understanding of the succession process of secondary forests after interference. To study the changes in forest spatial structure under different thinning intensities and stand densities, we considered five thinning intensities including unthinned (0%), low (3.4%, 6.2%, 12.5%), medium (16.8%, 20.9%, 25.5%), high (34.4%, 40.0%, 47.9%), and extra-high (50.6%, 59.9%, 67.3%) intensity. In addition, three different stand densities for each degree of thinning intensity. The results showed that the most horizontal distribution patterns after thinning were uniform distribution and near-uniform random distribution. Most of the trees were not mixed while several were mixed to an above medium degree. The effect on dominance of thinning was not significant and the overall plots were in the middle level. The tree density was in the sparse status. Competitive pressure on the reference tree was reduced. Thinning intensity and stand density affected stand spatial structure to different degrees. There were no obvious pattern under different thinning intensities and it was optimal at approximately 1600 trees/ha. As thinning intensity increased, the impact tended to decrease first and then increase under certain stand density. The improvement was greatest when thinning intensity was low. By analyzing the stand’s spatial structure after thinning, the unreasonableness of the stand’s spatial structure can be found, which provides the basis for optimizing management measures. We used the AHP-entropy to weigh the importance of each spatial structure parameter and we proposed a comprehensive distance evaluation index based on the optimal value obtained in order to perform a comprehensive evaluation of a forest’s spatial structure.