1
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Pravdivtsev AN, Tickner BJ, Glöggler S, Hövener JB, Buntkowsky G, Duckett SB, Bowers CR, Zhivonitko VV. Unconventional Parahydrogen-Induced Hyperpolarization Effects in Chemistry and Catalysis: From Photoreactions to Enzymes. ACS Catal 2025; 15:6386-6409. [PMID: 40270879 PMCID: PMC12013695 DOI: 10.1021/acscatal.4c07870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2024] [Revised: 02/21/2025] [Accepted: 02/25/2025] [Indexed: 04/25/2025]
Abstract
Nuclear spin hyperpolarization utilizing parahydrogen has the potential for broad applications in chemistry, catalysis, biochemistry, and medicine. This review examines recent chemical and biochemical insights gained using parahydrogen-induced polarization (PHIP). We begin with photoinduced PHIP, which allows the investigation of short-lived and photoactivated catalysis. Next, we review the partially negative line effect, in which distinctive line shape helps to reveal information about rapid exchange with parahydrogen and the role of short-lived catalytic species. The NMR signal enhancement of a single proton in oneH-PHIP is discussed, challenging the underpinning concept of the necessity of pairwise hydrogenation. Furthermore, we examine metal-free PHIP facilitated by frustrated Lewis pair molecular tweezers and radicaloids, demonstrating alternative routes to hydrogenation. Although symmetric molecules incorporating parahydrogen are NMR silent, we showcase methods that reveal hyperpolarized states through post-hydrogenation reactions. We discuss chemical exchange processes that mediate polarization transfer between parahydrogen and a molecular target, expanding the reach of PHIP without synthesizing specialized precursors. We conclude this review by highlighting the role of PHIP in uncovering the H2 activation mechanisms of hydrogenases. By providing a detailed review of these diverse phenomena, we aim to familiarize the reader with the versatility of PHIP and its potential applications for mechanistic studies and chemical analysis.
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Affiliation(s)
- Andrey N. Pravdivtsev
- Department
Section Biomedical Imaging, Molecular Imaging North Competence Center
(MOIN CC), Department of Radiology and Neuroradiology University Medical Center Kiel, Kiel University, Am Botanischen Garten 14, 24118 Kiel, Germany
| | - Ben J. Tickner
- Centre
for Hyperpolarization in Magnetic Resonance (CHyM), Department of
Chemistry University of York, Heslington, YO10 5NY, United Kingdom
| | - Stefan Glöggler
- Max-Planck-Institute
for Multidisciplinary Sciences, Am Faßberg 11, 37077 Göttingen, Germany
- Center
for Biostructural Imaging of Neurodegeneration (BIN), Von-Siebold-Str. 3a, 37075 Göttingen, Germany
- Advanced
Imaging Research Center, The University
of Texas Southwestern Medical Center, Dallas, Texas 75390, United States
| | - Jan-Bernd Hövener
- Department
Section Biomedical Imaging, Molecular Imaging North Competence Center
(MOIN CC), Department of Radiology and Neuroradiology University Medical Center Kiel, Kiel University, Am Botanischen Garten 14, 24118 Kiel, Germany
| | - Gerd Buntkowsky
- Eduard-Zintl-Institut
für Anorganische und Physikalische Chemie, Technische Universität Darmstadt, Peter-Grünberg-Str. 8, D-64287 Darmstadt, Germany
| | - Simon B. Duckett
- Centre
for Hyperpolarization in Magnetic Resonance (CHyM), Department of
Chemistry University of York, Heslington, YO10 5NY, United Kingdom
| | - Clifford R. Bowers
- Department
of Chemistry and National High Magnetic Field Laboratory, University of Florida, Gainesville, Florida 32611, United States
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2
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Pham P, Biswas O, Hilty C. Parahydrogen Polarization in Reverse Micelles and Application to Sensing of Protein-Ligand Binding. J Am Chem Soc 2024; 146:34274-34278. [PMID: 39652060 DOI: 10.1021/jacs.4c13177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2024]
Abstract
A medium containing reverse micelles supports non-hydrogenative parahydrogen induced polarization (nhPHIP) in the organic phase while solubilizing a protein in the aqueous phase. Strongly enhanced NMR signals from iridium hydride complexes report on a ligand, 4-amino-2-benzylaminopyrimidine, which crosses the phase boundary and interacts with the thiaminase protein TenA. The calculation of binding equilibria reveals a KD of 39.7 ± 8.9 μM for protein binding. The nanoscale separation of the two phases allows the separate optimization of the parahydrogen polarization and solubilization of a biological macromolecule. The reverse micelles may be used to study other biological questions using signal enhancement by parahydrogen polarization, such as enzyme reactions, protein-protein interactions, and protein binding epitopes.
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Affiliation(s)
- Pierce Pham
- Chemistry Department, Texas A&M University, 3255 TAMU, College Station, Texas 77843, United States
| | - Oindrila Biswas
- Chemistry Department, Texas A&M University, 3255 TAMU, College Station, Texas 77843, United States
| | - Christian Hilty
- Chemistry Department, Texas A&M University, 3255 TAMU, College Station, Texas 77843, United States
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3
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Assaf CD, Gui X, Salnikov OG, Brahms A, Chukanov NV, Skovpin IV, Chekmenev EY, Herges R, Duckett SB, Koptyug IV, Buckenmaier K, Körber R, Plaumann M, Auer AA, Hövener JB, Pravdivtsev AN. Analysis of chemical exchange in iridium N-heterocyclic carbene complexes using heteronuclear parahydrogen-enhanced NMR. Commun Chem 2024; 7:286. [PMID: 39627452 PMCID: PMC11614900 DOI: 10.1038/s42004-024-01376-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2024] [Accepted: 11/21/2024] [Indexed: 12/06/2024] Open
Abstract
The signal amplification by reversible exchange process (SABRE) enhances NMR signals by unlocking hidden polarization in parahydrogen through interactions with to-be-hyperpolarized substrate molecules when both are transiently bound to an Ir-based organometallic catalyst. Recent efforts focus on optimizing polarization transfer from parahydrogen-derived hydride ligands to the substrate in SABRE. However, this requires quantitative information on ligand exchange rates, which common NMR techniques struggle to provide. Here, we introduce an experimental spin order transfer sequence, with readout occurring at 15N nuclei directly interacting with the catalyst. Enhanced 15N NMR signals overcome sensitivity challenges, encoding substrate dissociation rates. This methodology enables robust data fitting to ligand exchange models, yielding substrate dissociation rate constants with higher precision than classical 1D and 2D 1H NMR approaches. This refinement improves the accuracy of key activation enthalpy ΔH‡ and entropy ΔS‡ estimates. Furthermore, the higher chemical shift dispersion provided by enhanced 15N NMR reveals the kinetics of substrate dissociation for acetonitrile and metronidazole, previously inaccessible via 1H NMR due to small chemical shift differences between free and Ir-bound substrates. The presented approach can be successfully applied not only to isotopically enriched substrates but also to compounds with natural abundance of the to-be-hyperpolarized heteronuclei.
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Affiliation(s)
- Charbel D Assaf
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Kiel, Kiel University, Am Botanischen Garten 14, 24118, Kiel, Germany.
| | - Xin Gui
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470, Mülheim an der Ruhr, Germany
| | - Oleg G Salnikov
- International Tomography Center SB RAS, 3A Institutskaya St., 630090, Novosibirsk, Russia
| | - Arne Brahms
- Otto Diels Institute for Organic Chemistry, Kiel University, Otto- Hahn Platz 4, 24118, Kiel, Germany
| | - Nikita V Chukanov
- International Tomography Center SB RAS, 3A Institutskaya St., 630090, Novosibirsk, Russia
| | - Ivan V Skovpin
- International Tomography Center SB RAS, 3A Institutskaya St., 630090, Novosibirsk, Russia
| | - Eduard Y Chekmenev
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI), Wayne State University, Detroit, MI, 48202, USA
| | - Rainer Herges
- Otto Diels Institute for Organic Chemistry, Kiel University, Otto- Hahn Platz 4, 24118, Kiel, Germany
| | - Simon B Duckett
- Centre for Hyperpolarization in Magnetic Resonance (CHyM), University of York, Heslington, YO10 5NY, UK
| | - Igor V Koptyug
- International Tomography Center SB RAS, 3A Institutskaya St., 630090, Novosibirsk, Russia
| | - Kai Buckenmaier
- High-Field Magnetic Resonance Center, Max Planck Institute for Biological Cybernetics, Max-Planck-Ring 11, 72076, Tübingen, Germany
| | - Rainer Körber
- Physikalisch-Technische Bundesanstalt (PTB), Abbestraße 2-12, 10587, Berlin, Germany
| | - Markus Plaumann
- Otto-von-Guericke-University Magdeburg, Institute for Molecular Biology and Medicinal Chemistry, Leipziger Str. 44, 39120, Magdeburg, Germany
| | - Alexander A Auer
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470, Mülheim an der Ruhr, Germany
| | - Jan-Bernd Hövener
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Kiel, Kiel University, Am Botanischen Garten 14, 24118, Kiel, Germany
| | - Andrey N Pravdivtsev
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Kiel, Kiel University, Am Botanischen Garten 14, 24118, Kiel, Germany.
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4
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Ghini V, Meoni G, Vignoli A, Di Cesare F, Tenori L, Turano P, Luchinat C. Fingerprinting and profiling in metabolomics of biosamples. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2023; 138-139:105-135. [PMID: 38065666 DOI: 10.1016/j.pnmrs.2023.10.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 10/13/2023] [Accepted: 10/15/2023] [Indexed: 12/18/2023]
Abstract
This review focuses on metabolomics from an NMR point of view. It attempts to cover the broad scope of metabolomics and describes the NMR experiments that are most suitable for each sample type. It is addressed not only to NMR specialists, but to all researchers who wish to approach metabolomics with a clear idea of what they wish to achieve but not necessarily with a deep knowledge of NMR. For this reason, some technical parts may seem a bit naïve to the experts. The review starts by describing standard metabolomics procedures, which imply the use of a dedicated 600 MHz instrument and of four properly standardized 1D experiments. Standardization is a must if one wants to directly compare NMR results obtained in different labs. A brief mention is also made of standardized pre-analytical procedures, which are even more essential. Attention is paid to the distinction between fingerprinting and profiling, and the advantages and disadvantages of fingerprinting are clarified. This aspect is often not fully appreciated. Then profiling, and the associated problems of signal assignment and quantitation, are discussed. We also describe less conventional approaches, such as the use of different magnetic fields, the use of signal enhancement techniques to increase sensitivity, and the potential of field-shuttling NMR. A few examples of biomedical applications are also given, again with the focus on NMR techniques that are most suitable to achieve each particular goal, including a description of the most common heteronuclear experiments. Finally, the growing applications of metabolomics to foodstuffs are described.
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Affiliation(s)
- Veronica Ghini
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Gaia Meoni
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Alessia Vignoli
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Francesca Di Cesare
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Leonardo Tenori
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy; Consorzio Interuniversitario Risonanze Magnetiche Metallo Proteine (CIRMMP), Sesto Fiorentino, Italy
| | - Paola Turano
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy; Consorzio Interuniversitario Risonanze Magnetiche Metallo Proteine (CIRMMP), Sesto Fiorentino, Italy.
| | - Claudio Luchinat
- Consorzio Interuniversitario Risonanze Magnetiche Metallo Proteine (CIRMMP), Sesto Fiorentino, Italy; Giotto Biotech S.r.l., Sesto Fiorentino, Italy.
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5
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Reimets N, Ausmees K, Vija S, Trummal A, Uudsemaa M, Reile I. Parahydrogen hyperpolarized NMR detection of underivatized short oligopeptides. Analyst 2023; 148:5407-5415. [PMID: 37791463 DOI: 10.1039/d3an01345f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/05/2023]
Abstract
Parahydrogen hyperpolarization has evolved into a versatile tool in NMR, allowing substantial sensitivity enhancements in analysis of biological samples. Herein we show how its application scope can be extended from small metabolites to underivatized oligopeptides in solution. Based on a homologous series of alanine oligomers, we report on an experimental and DFT study on the structure of the oligopeptide and hyperpolarization catalyst complexes formed in the process. We demonstrate that alanine oligomers coordinate to the iridium carbene-based catalyst in three different ways, each giving rise to distinctive hydride signals. Moreover, the exact structures of the transient oligopeptide-catalyst complexes are oligomer-specific. This work gives a first insight into how the organometallic iridium-N-heterocyclic carbene-based parahydrogen hyperpolarization catalyst interacts with biopolymers that have multiple catalyst binding sites. A preliminary application example is demonstrated for oligopeptide detection in urine, a complex biological mixture.
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Affiliation(s)
- Nele Reimets
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
- School of Science, Tallinn University of Technology, Ehitajate tee 5, Tallinn 19086, Estonia
| | - Kerti Ausmees
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Sirje Vija
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Aleksander Trummal
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Merle Uudsemaa
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
| | - Indrek Reile
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, Tallinn 12618, Estonia.
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6
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Xu Z, Zhao Y. 19 F-Labeled Probes for Recognition-Enabled Chromatographic 19 F NMR. CHEM REC 2023; 23:e202300031. [PMID: 37052541 DOI: 10.1002/tcr.202300031] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2023] [Revised: 03/05/2023] [Indexed: 04/14/2023]
Abstract
The NMR technique is among the most powerful analytical methods for molecular structural elucidation, process monitoring, and mechanistic investigations; however, the direct analysis of complex real-world samples is often hampered by crowded NMR spectra that are difficult to interpret. The combination of fluorine chemistry and supramolecular interactions leads to a unique detection method named recognition-enabled chromatographic (REC) 19 F NMR, where interactions between analytes and 19 F-labeled probes are transduced into chromatogram-like 19 F NMR signals of discrete chemical shifts. In this account, we summarize our endeavor to develop novel 19 F-labeled probes tailored for separation-free multicomponent analysis. The strategies to achieve chiral discrimination, sensitivity enhancement, and automated analyte identification will be covered. The account will also provide a detailed discussion of the underlying principles for the design of molecular probes for REC 19 F NMR where appropriate.
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Affiliation(s)
- Zhenchuang Xu
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai, 200032, China
| | - Yanchuan Zhao
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai, 200032, China
- Key Laboratory of Energy Regulation Materials, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai, 200032, China
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7
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Eills J, Budker D, Cavagnero S, Chekmenev EY, Elliott SJ, Jannin S, Lesage A, Matysik J, Meersmann T, Prisner T, Reimer JA, Yang H, Koptyug IV. Spin Hyperpolarization in Modern Magnetic Resonance. Chem Rev 2023; 123:1417-1551. [PMID: 36701528 PMCID: PMC9951229 DOI: 10.1021/acs.chemrev.2c00534] [Citation(s) in RCA: 113] [Impact Index Per Article: 56.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Indexed: 01/27/2023]
Abstract
Magnetic resonance techniques are successfully utilized in a broad range of scientific disciplines and in various practical applications, with medical magnetic resonance imaging being the most widely known example. Currently, both fundamental and applied magnetic resonance are enjoying a major boost owing to the rapidly developing field of spin hyperpolarization. Hyperpolarization techniques are able to enhance signal intensities in magnetic resonance by several orders of magnitude, and thus to largely overcome its major disadvantage of relatively low sensitivity. This provides new impetus for existing applications of magnetic resonance and opens the gates to exciting new possibilities. In this review, we provide a unified picture of the many methods and techniques that fall under the umbrella term "hyperpolarization" but are currently seldom perceived as integral parts of the same field. Specifically, before delving into the individual techniques, we provide a detailed analysis of the underlying principles of spin hyperpolarization. We attempt to uncover and classify the origins of hyperpolarization, to establish its sources and the specific mechanisms that enable the flow of polarization from a source to the target spins. We then give a more detailed analysis of individual hyperpolarization techniques: the mechanisms by which they work, fundamental and technical requirements, characteristic applications, unresolved issues, and possible future directions. We are seeing a continuous growth of activity in the field of spin hyperpolarization, and we expect the field to flourish as new and improved hyperpolarization techniques are implemented. Some key areas for development are in prolonging polarization lifetimes, making hyperpolarization techniques more generally applicable to chemical/biological systems, reducing the technical and equipment requirements, and creating more efficient excitation and detection schemes. We hope this review will facilitate the sharing of knowledge between subfields within the broad topic of hyperpolarization, to help overcome existing challenges in magnetic resonance and enable novel applications.
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Affiliation(s)
- James Eills
- Institute
for Bioengineering of Catalonia, Barcelona
Institute of Science and Technology, 08028Barcelona, Spain
| | - Dmitry Budker
- Johannes
Gutenberg-Universität Mainz, 55128Mainz, Germany
- Helmholtz-Institut,
GSI Helmholtzzentrum für Schwerionenforschung, 55128Mainz, Germany
- Department
of Physics, UC Berkeley, Berkeley, California94720, United States
| | - Silvia Cavagnero
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Eduard Y. Chekmenev
- Department
of Chemistry, Integrative Biosciences (IBio), Karmanos Cancer Institute
(KCI), Wayne State University, Detroit, Michigan48202, United States
- Russian
Academy of Sciences, Moscow119991, Russia
| | - Stuart J. Elliott
- Molecular
Sciences Research Hub, Imperial College
London, LondonW12 0BZ, United Kingdom
| | - Sami Jannin
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Anne Lesage
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Jörg Matysik
- Institut
für Analytische Chemie, Universität
Leipzig, Linnéstr. 3, 04103Leipzig, Germany
| | - Thomas Meersmann
- Sir
Peter Mansfield Imaging Centre, University Park, School of Medicine, University of Nottingham, NottinghamNG7 2RD, United Kingdom
| | - Thomas Prisner
- Institute
of Physical and Theoretical Chemistry and Center of Biomolecular Magnetic
Resonance, Goethe University Frankfurt, , 60438Frankfurt
am Main, Germany
| | - Jeffrey A. Reimer
- Department
of Chemical and Biomolecular Engineering, UC Berkeley, and Materials Science Division, Lawrence Berkeley National
Laboratory, Berkeley, California94720, United States
| | - Hanming Yang
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Igor V. Koptyug
- International Tomography Center, Siberian
Branch of the Russian Academy
of Sciences, 630090Novosibirsk, Russia
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8
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Kidd BE, Gemeinhardt ME, Mashni JA, Gesiorski JL, Bales LB, Limbach MN, Shchepin RV, Kovtunov KV, Koptyug IV, Chekmenev EY, Goodson BM. Hyperpolarizing DNA Nucleobases via NMR Signal Amplification by Reversible Exchange. Molecules 2023; 28:1198. [PMID: 36770865 PMCID: PMC9921525 DOI: 10.3390/molecules28031198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 01/11/2023] [Accepted: 01/11/2023] [Indexed: 01/27/2023] Open
Abstract
The present work investigates the potential for enhancing the NMR signals of DNA nucleobases by parahydrogen-based hyperpolarization. Signal amplification by reversible exchange (SABRE) and SABRE in Shield Enables Alignment Transfer to Heteronuclei (SABRE-SHEATH) of selected DNA nucleobases is demonstrated with the enhancement (ε) of 1H, 15N, and/or 13C spins in 3-methyladenine, cytosine, and 6-O-guanine. Solutions of the standard SABRE homogenous catalyst Ir(1,5-cyclooctadeine)(1,3-bis(2,4,6-trimethylphenyl)imidazolium)Cl ("IrIMes") and a given nucleobase in deuterated ethanol/water solutions yielded low 1H ε values (≤10), likely reflecting weak catalyst binding. However, we achieved natural-abundance enhancement of 15N signals for 3-methyladenine of ~3300 and ~1900 for the imidazole ring nitrogen atoms. 1H and 15N 3-methyladenine studies revealed that methylation of adenine affords preferential binding of the imidazole ring over the pyrimidine ring. Interestingly, signal enhancements (ε~240) of both 15N atoms for doubly labelled cytosine reveal the preferential binding of specific tautomer(s), thus giving insight into the matching of polarization-transfer and tautomerization time scales. 13C enhancements of up to nearly 50-fold were also obtained for this cytosine isotopomer. These efforts may enable the future investigation of processes underlying cellular function and/or dysfunction, including how DNA nucleobase tautomerization influences mismatching in base-pairing.
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Affiliation(s)
- Bryce E. Kidd
- School of Chemical & Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, USA
| | - Max E. Gemeinhardt
- School of Chemical & Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, USA
| | - Jamil A. Mashni
- School of Chemical & Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, USA
| | - Jonathan L. Gesiorski
- School of Chemical & Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, USA
| | - Liana B. Bales
- School of Chemical & Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, USA
| | - Miranda N. Limbach
- School of Chemical & Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, USA
- Department of Chemistry, University of Tennessee, Knoxville, TN 37996, USA
| | - Roman V. Shchepin
- Department of Chemistry, Biology, and Health Sciences, South Dakota School of Mines & Technology, Rapid City, SD 57701, USA
| | - Kirill V. Kovtunov
- International Tomography Center SB RAS, 3A Institutskaya St., Novosibirsk 630090, Russia
| | - Igor V. Koptyug
- International Tomography Center SB RAS, 3A Institutskaya St., Novosibirsk 630090, Russia
| | - Eduard Y. Chekmenev
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI) Wayne State University, Detroit, MI 48202, USA
| | - Boyd M. Goodson
- School of Chemical & Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, USA
- Materials Technology Center, Southern Illinois University, Carbondale, IL 62901, USA
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9
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Dreisewerd L, Aspers RLEG, Feiters MC, Rutjes FPJT, Tessari M. NMR Discrimination of d- and l-α-Amino Acids at Submicromolar Concentration via Parahydrogen-Induced Hyperpolarization. J Am Chem Soc 2023; 145:1518-1523. [PMID: 36626573 PMCID: PMC9880991 DOI: 10.1021/jacs.2c11285] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Differentiation of enantiomers represents an important research area for pharmaceutical, chemical, and food industries. However, enantiomer separation is a laborious task that demands complex analytical techniques, specialized equipment, and expert personnel. In this respect, discrimination and quantification of d- and l-α-amino acids is no exception, generally requiring extensive sample manipulation, including isolation, functionalization, and chiral separation. This complex sample treatment results in high time costs and potential biases in the quantitative determination. Here, we present an approach based on the combination of non-hydrogenative parahydrogen-induced hyperpolarization and nuclear magnetic resonance that allows detection, discrimination, and quantification of d- and l-α-amino acids in complex mixtures such as biofluids and food extracts down to submicromolar concentrations. Importantly, this method can be directly applied to the system under investigation without any prior isolation, fractionation, or functionalization step.
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10
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Dumez JN. NMR methods for the analysis of mixtures. Chem Commun (Camb) 2022; 58:13855-13872. [PMID: 36458684 PMCID: PMC9753098 DOI: 10.1039/d2cc05053f] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 10/19/2022] [Indexed: 07/31/2023]
Abstract
NMR spectroscopy is a powerful approach for the analysis of mixtures. Its usefulness arises in large part from the vast landscape of methods, and corresponding pulse sequences, that have been and are being designed to tackle the specific properties of mixtures of small molecules. This feature article describes a selection of methods that aim to address the complexity, the low concentrations, and the changing nature that mixtures can display. These notably include pure-shift and diffusion NMR methods, hyperpolarisation methods, and fast 2D NMR methods such as ultrafast 2D NMR and non-uniform sampling. Examples or applications are also described, in fields such as reaction monitoring and metabolomics, to illustrate the relevance and limitations of different methods.
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11
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Salnikov OG, Trofimov IA, Pravdivtsev AN, Them K, Hövener JB, Chekmenev EY, Koptyug IV. Through-Space Multinuclear Magnetic Resonance Signal Enhancement Induced by Parahydrogen and Radiofrequency Amplification by Stimulated Emission of Radiation. Anal Chem 2022; 94:15010-15017. [PMID: 36264746 PMCID: PMC10007960 DOI: 10.1021/acs.analchem.2c02929] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Hyperpolarized (i.e., polarized far beyond the thermal equilibrium) nuclear spins can result in the radiofrequency amplification by stimulated emission of radiation (RASER) effect. Here, we show the utility of RASER to amplify nuclear magnetic resonance (NMR) signals of solute and solvent molecules in the liquid state. Specifically, parahydrogen-induced RASER was used to spontaneously enhance nuclear spin polarization of protons and heteronuclei (here 19F and 31P) in a wide range of molecules. The magnitude of the effect correlates with the T1 relaxation time of the target nuclear spins. A series of control experiments validate the through-space dipolar mechanism of the RASER-assisted polarization transfer between the parahydrogen-polarized compound and to-be-hyperpolarized nuclei of the target molecule. Frequency-selective saturation of the RASER-active resonances was used to control the RASER and the amplitude of spontaneous polarization transfer. Spin dynamics simulations support our experimental RASER studies. The enhanced NMR sensitivity may benefit various NMR applications such as mixture analysis, metabolomics, and structure determination.
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Affiliation(s)
- Oleg G. Salnikov
- International Tomography Center SB RAS, 3A Institutskaya St., 630090 Novosibirsk, Russia
- Boreskov Institute of Catalysis SB RAS, 5 Acad. Lavrentiev Pr., 630090 Novosibirsk, Russia
| | - Ivan A. Trofimov
- International Tomography Center SB RAS, 3A Institutskaya St., 630090 Novosibirsk, Russia
- Novosibirsk State University, 2 Pirogova St., 630090 Novosibirsk, Russia
| | - Andrey N. Pravdivtsev
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein and Kiel University, 24118 Kiel, Germany
| | - Kolja Them
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein and Kiel University, 24118 Kiel, Germany
| | - Jan-Bernd Hövener
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein and Kiel University, 24118 Kiel, Germany
| | - Eduard Y. Chekmenev
- Department of Chemistry, Integrative Biosciences (Ibio), Karmanos Cancer Institute (KCI), Wayne State University, Detroit, Michigan 48202, United States
- Russian Academy of Sciences, 14 Leninskiy Pr., 119991 Moscow, Russia
| | - Igor V. Koptyug
- International Tomography Center SB RAS, 3A Institutskaya St., 630090 Novosibirsk, Russia
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12
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Fraser R, Rutjes FPJT, Feiters MC, Tessari M. Analysis of Complex Mixtures by Chemosensing NMR Using para-Hydrogen-Induced Hyperpolarization. Acc Chem Res 2022; 55:1832-1844. [PMID: 35709417 PMCID: PMC9260963 DOI: 10.1021/acs.accounts.1c00796] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
![]()
Nuclear magnetic resonance (NMR) is a powerful technique for chemical
analysis. The use of NMR to investigate dilute analytes in complex
systems is, however, hampered by its relatively low sensitivity. An
additional obstacle is represented by the NMR signal overlap. Because
solutes in a complex mixture are usually not isotopically labeled,
NMR studies are often limited to 1H measurements, which,
because of the modest dispersion of the 1H resonances (typically
∼10 ppm), can result in challenging signal crowding. The low
NMR sensitivity issue can be alleviated by nuclear spin hyperpolarization
(i.e., transiently increasing the differences in nuclear spin populations),
which determines large NMR signal enhancements. This has been demonstrated
for hyperpolarization methods such as dynamic nuclear polarization,
spin-exchange optical pumping and para-hydrogen-induced
polarization (PHIP). In particular, PHIP has grown into a fast, efficient,
and versatile technique since the recent discovery of non-hydrogenative
routes to achieve nuclear spin hyperpolarization. For instance,
signal amplification by reversible exchange (SABRE)
can generate proton as well as heteronuclear spin hyperpolarization
in a few seconds in compounds that are able to transiently bind to
an iridium catalyst in the presence of para-hydrogen
in solution. The hyperpolarization transfer catalyst acts as a chemosensor
in the sense that it is selective for analytes that can coordinate
to the metal center, such as nitrogen-containing aromatic heterocycles,
sulfur heteroaromatic compounds, nitriles, Schiff bases, diaziridines,
carboxylic acids, and amines. We have demonstrated that the signal
enhancement achieved by SABRE allows rapid NMR detection and quantification
of a mixture of substrates down to low-micromolar concentration. Furthermore,
in the transient complex, the spin configuration of p-H2 can be easily converted to spin hyperpolarization
to produce up to 1000-fold enhanced NMR hydride signals. Because the
hydrides’ chemical shifts are highly sensitive to the structure
of the analyte associating with the iridium complex, they can be employed
as hyperpolarized “probes” to signal the presence of
specific compounds in the mixture. This indirect detection of the
analytes in solution provides important benefits in the case of complex
systems, as hydrides resonate in a region of the 1H spectrum
(at ca. −20 ppm) that is generally signal-free. The enhanced
sensitivity provided by non-hydrogenative PHIP (nhPHIP), together
with the absence of interference from the complex matrix (usually
resonating between 0 and 10 ppm), set the detection limit for this
NMR chemosensor down to sub-μM concentrations, approximately
3 orders of magnitude lower than for conventional NMR. This nhPHIP
approach represents, therefore, a powerful tool for NMR analysis of
dilute substrates in complex mixtures as it addresses at once the
issues of signal crowding and NMR sensitivity. Importantly, being
performed at high field inside the NMR spectrometer, the method allows
for rapid acquisition of multiple scans, multidimensional hyperpolarized
NMR spectra, in a fashion comparable to that of standard NMR measurements. In this Account, we focus on our chemosensing NMR technology, detailing
its principles, advantages, and limitations and presenting a number
of applications to real systems such as biofluids, beverages, and
natural extracts.
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Affiliation(s)
- Roan Fraser
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Floris P J T Rutjes
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Martin C Feiters
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
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13
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Xu Z, Gu S, Li Y, Wu J, Zhao Y. Recognition-Enabled Automated Analyte Identification via 19F NMR. Anal Chem 2022; 94:8285-8292. [PMID: 35622989 DOI: 10.1021/acs.analchem.2c00642] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Nuclear magnetic resonance (NMR) is an indispensable tool for structural elucidation and noninvasive analysis. Automated identification of analytes with NMR is highly pursued in metabolism research and disease diagnosis; however, this process is often complicated by the signal overlap and the sample matrix. We herein report a detection scheme based on 19F NMR spectroscopy and dynamic recognition, which effectively simplifies the detection signal and mitigates the influence of the matrix on the detection. It is demonstrated that this approach can not only detect and differentiate capsaicin and dihydrocapsaicin in complex real-world samples but also quantify the ibuprofen content in sustained-release capsules. Based on the 19F signals obtained in the detection using a set of three 19F probes, automated analyte identification is achieved, effectively reducing the odds of misrecognition caused by structural similarity.
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Affiliation(s)
- Zhenchuang Xu
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Siyi Gu
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Yipeng Li
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Jian Wu
- Instrumental Analysis Center, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Yanchuan Zhao
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China.,Key Laboratory of Energy Regulation Materials, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
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14
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Abstract
The widespread application of nuclear magnetic resonance (NMR) spectroscopy in detection is currently hampered by its inherently low sensitivity and complications resulting from the undesired signal overlap. Here, we report a detection scheme to address these challenges, where analytes are recognized by 19F-labeled probes to induce characteristic shifts of 19F resonances that can be used as "chromatographic" signatures to pin down each low-concentration analyte in complex mixtures. This unique signal transduction mechanism allows detection sensitivity to be enhanced by using massive chemically equivalent 19F atoms, which was achieved through the proper installation of nonafluoro-tert-butoxy groups on probes of high structural symmetry. It is revealed that the binding of an analyte to the probe can be sensed by as many as 72 chemically equivalent 19F atoms, allowing the quantification of analytes at nanomolar concentrations to be routinely performed by NMR. Applications on the detection of trace amounts of prohibited drug molecules and water contaminants were demonstrated. The high sensitivity and robust resolving ability of this approach represent a first step toward extending the application of NMR to scenarios that are now governed by chromatographic and mass spectrometry techniques. The detection scheme also makes possible the highly sensitive non-invasive multi-component analysis that is difficult to achieve by other analytical methods.
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Affiliation(s)
- Lixian Wen
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Huan Meng
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Siyi Gu
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
| | - Jian Wu
- Instrumental Analysis Center, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China
| | - Yanchuan Zhao
- Key Laboratory of Organofluorine Chemistry, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China.,Key Laboratory of Energy Regulation Materials, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, China
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15
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Joalland B, Chekmenev EY. Scanning Nuclear Spin Level Anticrossings by Constant-Adiabaticity Magnetic Field Sweeping of Parahydrogen-Induced 13C Polarization. J Phys Chem Lett 2022; 13:1925-1930. [PMID: 35180341 DOI: 10.1021/acs.jpclett.2c00029] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
The polarization transfer between 1H protons and 13C heteronuclei is of central importance in the development of parahydrogen-based hyperpolarization techniques dedicated to the production of 13C-hyperpolarized molecular probes. Here we unveil the spin conversion efficiency in the polarization transfer between parahydrogen-derived protons and 13C nuclei of an ethyl acetate biomolecule, formed by the homogeneous hydrogenation of vinyl acetate with parahydrogen, obtained by applying constant-adiabaticity sweep profiles at ultralow magnetic fields. The experiments employed natural C-13 abundance. Spin level anticrossings can be detected experimentally using a scanning approach and are selected to improve the polarization transfer efficiency. 13C polarization of up to 12% is readily achieved on the carbonyl center. The results demonstrate the simplicity, reproducibility, and high conversion efficiency of the technique, opening the door for a refined manipulation of hyperpolarized spins in both basic science experiments (e.g., state-selected spectroscopy in the strong-coupling regime) and biomedical nuclear magnetic resonance applications.
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Affiliation(s)
- Baptiste Joalland
- Department of Chemistry, Integrative Biosciences (IBio), Karmanos Cancer Institute (KCI), Wayne State University, Detroit, Michigan 48202, United States
| | - Eduard Y Chekmenev
- Department of Chemistry, Integrative Biosciences (IBio), Karmanos Cancer Institute (KCI), Wayne State University, Detroit, Michigan 48202, United States
- Russian Academy of Sciences, Leninskiy Prospekt 14, Moscow 119991, Russia
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16
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Ausmees K, Reimets N, Reile I. Understanding Parahydrogen Hyperpolarized Urine Spectra: The Case of Adenosine Derivatives. Molecules 2022; 27:802. [PMID: 35164066 PMCID: PMC8837968 DOI: 10.3390/molecules27030802] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Revised: 01/19/2022] [Accepted: 01/21/2022] [Indexed: 01/25/2023] Open
Abstract
Parahydrogen hyperpolarization has emerged as a promising tool for sensitivity-enhanced NMR metabolomics. It allows resolution and quantification of NMR signals of certain classes of low-abundance metabolites that would otherwise be undetectable. Applications have been implemented in pharmacokinetics and doping drug detection, demonstrating the versatility of the technique. Yet, in order for the method to be adopted by the analytical community, certain limitations have to be understood and overcome. One such question is NMR signal assignment. At present, the only reliable way to establish the identity of an analyte that gives rise to certain parahydrogen hyperpolarized NMR signals is internal standard addition, which can be laborious. Herein we show that analogously to regular NMR metabolomics, generating libraries of hyperpolarized analyte signals is a viable way to address this limitation. We present hyperpolarized spectral data of adenosines and give an early example of identifying them from a urine sample with the small library. Doing so, we verify the detectability of a class of diagnostically valuable metabolites: adenosine and its derivatives, some of which are cancer biomarkers, and some are central to cellular energy management (e.g., ATP).
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Affiliation(s)
| | | | - Indrek Reile
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, 12618 Tallinn, Estonia; (K.A.); (N.R.)
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17
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Zhao J, Wang M, Saroja SG, Khan IA. NMR technique and methodology in botanical health product analysis and quality control. J Pharm Biomed Anal 2022; 207:114376. [PMID: 34656935 DOI: 10.1016/j.jpba.2021.114376] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 09/03/2021] [Accepted: 09/14/2021] [Indexed: 12/13/2022]
Abstract
Botanicals have played an important role in maintaining human health and well-being throughout history. During the past few decades in particular, the use of botanical health products has gained more popularity. Whereas, quality, safety and efficacy concerns have continuously been critical issues due to the intrinsic chemical complexity of botanicals. Chemical analytical technologies play an imperative role in addressing these issues. Nuclear magnetic resonance (NMR) spectroscopy has proven to be a powerful and useful tool for the investigation of botanical health products. In this review, NMR techniques and methodologies that have been successfully applied to the research and development of botanical health products in all stages, from plants to products, are discussed and summarized. Furthermore, applications of NMR together with other analytical techniques in a variety of domains of botanical health products investigation, such as plant species differentiation, adulteration detection, and bio-activity evaluation, are discussed and illustrated with typical examples. This article provides an overview of the potential uses of NMR techniques and methodologies in an attempt to further promote their recognition and utilization in the field of botanical health products analysis and quality control.
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Affiliation(s)
- Jianping Zhao
- National Center for Natural Products Research (NCNPR), School of Pharmacy, University of Mississippi, University, MS 38677, USA.
| | - Mei Wang
- Natural Products Utilization Research Unit, Agricultural Research Service, US Department of Agriculture, University, MS 38677, USA
| | - Seethapathy G Saroja
- National Center for Natural Products Research (NCNPR), School of Pharmacy, University of Mississippi, University, MS 38677, USA
| | - Ikhlas A Khan
- National Center for Natural Products Research (NCNPR), School of Pharmacy, University of Mississippi, University, MS 38677, USA; Division of Pharmacognosy, Department of BioMolecular Sciences, School of Pharmacy, University of Mississippi, University, MS 38677, USA.
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18
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Sellies L, Aspers RLEG, Feiters MC, Rutjes FPJT, Tessari M. Parahydrogen Hyperpolarization Allows Direct NMR Detection of α-Amino Acids in Complex (Bio)mixtures. Angew Chem Int Ed Engl 2021; 60:26954-26959. [PMID: 34534406 PMCID: PMC9299667 DOI: 10.1002/anie.202109588] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2021] [Indexed: 12/12/2022]
Abstract
The scope of non-hydrogenative parahydrogen hyperpolarization (nhPHIP) techniques has been expanding over the last years, with the continuous addition of important classes of substrates. For example, pyruvate can now be hyperpolarized using the Signal Amplification By Reversible Exchange (SABRE) technique, offering a fast, efficient and low-cost PHIP alternative to Dynamic Nuclear Polarization for metabolic imaging studies. Still, important biomolecules such as amino acids have so far resisted PHIP, unless properly functionalized. Here, we report on an approach to nhPHIP for unmodified α-amino acids that allows their detection and quantification in complex mixtures at sub-micromolar concentrations. This method was tested on human urine, in which natural α-amino acids could be measured after dilution with methanol without any additional sample treatment.
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Affiliation(s)
- Lisanne Sellies
- Institute for Molecules and MaterialsRadboud UniversityHeyendaalseweg 1356525AJNijmegenThe Netherlands
| | - Ruud L. E. G. Aspers
- Institute for Molecules and MaterialsRadboud UniversityHeyendaalseweg 1356525AJNijmegenThe Netherlands
| | - Martin C. Feiters
- Institute for Molecules and MaterialsRadboud UniversityHeyendaalseweg 1356525AJNijmegenThe Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and MaterialsRadboud UniversityHeyendaalseweg 1356525AJNijmegenThe Netherlands
| | - Marco Tessari
- Institute for Molecules and MaterialsRadboud UniversityHeyendaalseweg 1356525AJNijmegenThe Netherlands
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19
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Sellies L, Aspers RLEG, Feiters MC, Rutjes FPJT, Tessari M. Parahydrogen Hyperpolarization Allows Direct NMR Detection of α‐Amino Acids in Complex (Bio)mixtures. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202109588] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Lisanne Sellies
- Institute for Molecules and Materials Radboud University Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Ruud L. E. G. Aspers
- Institute for Molecules and Materials Radboud University Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Martin C. Feiters
- Institute for Molecules and Materials Radboud University Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and Materials Radboud University Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials Radboud University Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
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20
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Ausmees K, Reimets N, Reile I. Parahydrogen hyperpolarization of minimally altered urine samples for sensitivity enhanced NMR metabolomics. Chem Commun (Camb) 2021; 58:463-466. [PMID: 34908034 DOI: 10.1039/d1cc05665d] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Parahydrogen hyperpolarization has been shown to enhance NMR sensitivity in urine analysis by several orders of magnitude if urine samples are prepared by solid phase extraction (SPE). We present a different approach, developed for minimal sample alteration before analysis. Removing SPE from the workflow allows to retain a wider range of metabolites and paves the way towards more universal hyperpolarized NMR metabolomics of low abundance metabolites.
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Affiliation(s)
- Kerti Ausmees
- The National Institute of Chemical Physics and Biophysics (NICPB), Tallinn, Estonia.
| | - Nele Reimets
- The National Institute of Chemical Physics and Biophysics (NICPB), Tallinn, Estonia.
| | - Indrek Reile
- The National Institute of Chemical Physics and Biophysics (NICPB), Tallinn, Estonia.
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21
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Frahm AB, Hill D, Katsikis S, Andreassen T, Ardenkjær-Larsen JH, Bathen TF, Moestue SA, Jensen PR, Lerche MH. Classification and biomarker identification of prostate tissue from TRAMP mice with hyperpolarized 13C-SIRA. Talanta 2021; 235:122812. [PMID: 34517669 DOI: 10.1016/j.talanta.2021.122812] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 08/14/2021] [Accepted: 08/16/2021] [Indexed: 12/16/2022]
Abstract
Hyperpolarized 13C isotope resolved spectroscopy boosts NMR signal intensity, which improves signal detection and allows metabolic fluxes to be analyzed. Such hyperpolarized flux data may offer new approaches to tissue classification and biomarker identification that could be translated in vivo. Here we used hyperpolarized stable isotope resolved analysis (SIRA) to measure metabolite specific 13C isotopic enrichments in the central carbon metabolism of mouse prostate. Prostate and tumor tissue samples were acquired from transgenic adenocarcinomas of the mouse prostate (TRAMP) mice. Before euthanasia, mice were injected with [U-13C]glucose intraperitoneally (i.p.). Polar metabolite extracts were prepared, and hyperpolarized 1D-13C NMR spectra were obtained from normal prostate (n = 19) and cancer tissue (n = 19) samples. Binary classification and feature analysis was performed to make a separation model and to investigate differences between samples originating from normal and cancerous prostate tissue, respectively. Hyperpolarized experiments were carried out according to a standardized protocol, which showed a high repeatability (CV = 15%) and an average linewidth in the 1D-13C NMR spectra of 2 ± 0.5 Hz. The resolution of the hyperpolarized 1D-13C spectra was high with little signal overlap in the carbonyl region and metabolite identification was easily accomplished. A discrimination with 95% success rate could be made between samples originating from TRAMP mice prostate and tumor tissue based on isotopomers from uniquely identified metabolites. Hyperpolarized 13C-SIRA allowed detailed metabolic information to be obtained from tissue specimens. The positional information of 13C isotopic enrichments lead to easily interpreted features responsible for high predictive classification of tissue types. This analytical approach has matured, and the robust experimental protocols currently available allow systematic tracking of metabolite flux ex vivo.
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Affiliation(s)
- Anne B Frahm
- Center for Hyperpolarization in Magnetic Resonance, Department of Health Technology, Ørsteds plads 349, 2800, Kongens Lyngby, Denmark
| | - Deborah Hill
- Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway
| | - Sotirios Katsikis
- Center for Hyperpolarization in Magnetic Resonance, Department of Health Technology, Ørsteds plads 349, 2800, Kongens Lyngby, Denmark
| | - Trygve Andreassen
- Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway
| | - Jan Henrik Ardenkjær-Larsen
- Center for Hyperpolarization in Magnetic Resonance, Department of Health Technology, Ørsteds plads 349, 2800, Kongens Lyngby, Denmark
| | - Tone Frost Bathen
- Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway
| | - Siver Andreas Moestue
- Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway; Department of Pharmacy, Nord University, Bodø, Norway
| | - Pernille Rose Jensen
- Center for Hyperpolarization in Magnetic Resonance, Department of Health Technology, Ørsteds plads 349, 2800, Kongens Lyngby, Denmark
| | - Mathilde Hauge Lerche
- Center for Hyperpolarization in Magnetic Resonance, Department of Health Technology, Ørsteds plads 349, 2800, Kongens Lyngby, Denmark.
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22
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Aspers RLEG, Tessari M. An approach to fast 2D nuclear magnetic resonance at low concentration based on p-H 2 -induced polarization and nonuniform sampling. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:1236-1243. [PMID: 34096084 DOI: 10.1002/mrc.5182] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Revised: 05/18/2021] [Accepted: 05/25/2021] [Indexed: 06/12/2023]
Abstract
Recent developments in para-hydrogen-induced polarization (PHIP) methods allow the nuclear magnetic resonance (NMR) detection of specific classes of compounds, down to sub-micromolar concentration in solution. However, when dealing with complex mixtures, signal resolution requires the acquisition of 2D PHIP-NMR spectra, which often results in long experimental times. This strongly limits the applicability of these 2D PHIP-NMR techniques in areas in which high-throughput analysis is required. Here, we present a combination of fast acquisition and nonuniform sampling that can afford a 10-fold reduction in measuring time without compromising the spectral quality. This approach was tested on a mixture of substrates at micromolar concentration, for which a resolved 2D PHIP spectrum was acquired in less than 3 min.
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Affiliation(s)
- Ruud L E G Aspers
- Institute for Molecules and Materials, Radboud University, Nijmegen, The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials, Radboud University, Nijmegen, The Netherlands
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23
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Taylor DA, Natrajan LS, Nilsson M, Adams RW. SABRE-enhanced real-time pure shift NMR spectroscopy. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:1244-1252. [PMID: 34405451 DOI: 10.1002/mrc.5206] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Revised: 08/04/2021] [Accepted: 08/12/2021] [Indexed: 06/13/2023]
Abstract
Pure shift nuclear magnetic resonance (NMR) methods suppress the effect of homonuclear scalar couplings to produce NMR spectra consisting solely of a single signal for each chemically distinct site. They are increasingly relied upon for analysis of complex molecules and mixtures as they overcome the extensive signal overlap that complicates proton NMR spectra of all but the simplest species. Current broadband pure shift methodologies for 1D proton spectra suffer from reduced sensitivity compared with their conventional counterparts and typically require a large amount of instrument time for low concentration samples. In this study, we demonstrate how the sensitivity limitation may be overcome by transiently increasing the bulk polarization using signal amplification by reversible exchange (SABRE) hyperpolarization. We utilize para-enriched dihydrogen to enhance the pure shift NMR resonances of pyridine by up to a factor of 60 in a single-scan experiment and extend this to propose a method to unambiguously determine mixture components based on the enhancement of their pure shift NMR signals.
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Affiliation(s)
- Daniel A Taylor
- Department of Chemistry, University of Manchester, Manchester, UK
| | | | - Mathias Nilsson
- Department of Chemistry, University of Manchester, Manchester, UK
| | - Ralph W Adams
- Department of Chemistry, University of Manchester, Manchester, UK
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24
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Letertre MPM, Giraudeau P, de Tullio P. Nuclear Magnetic Resonance Spectroscopy in Clinical Metabolomics and Personalized Medicine: Current Challenges and Perspectives. Front Mol Biosci 2021; 8:698337. [PMID: 34616770 PMCID: PMC8488110 DOI: 10.3389/fmolb.2021.698337] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Accepted: 08/30/2021] [Indexed: 12/12/2022] Open
Abstract
Personalized medicine is probably the most promising area being developed in modern medicine. This approach attempts to optimize the therapies and the patient care based on the individual patient characteristics. Its success highly depends on the way the characterization of the disease and its evolution, the patient’s classification, its follow-up and the treatment could be optimized. Thus, personalized medicine must combine innovative tools to measure, integrate and model data. Towards this goal, clinical metabolomics appears as ideally suited to obtain relevant information. Indeed, the metabolomics signature brings crucial insight to stratify patients according to their responses to a pathology and/or a treatment, to provide prognostic and diagnostic biomarkers, and to improve therapeutic outcomes. However, the translation of metabolomics from laboratory studies to clinical practice remains a subsequent challenge. Nuclear magnetic resonance spectroscopy (NMR) and mass spectrometry (MS) are the two key platforms for the measurement of the metabolome. NMR has several advantages and features that are essential in clinical metabolomics. Indeed, NMR spectroscopy is inherently very robust, reproducible, unbiased, quantitative, informative at the structural molecular level, requires little sample preparation and reduced data processing. NMR is also well adapted to the measurement of large cohorts, to multi-sites and to longitudinal studies. This review focus on the potential of NMR in the context of clinical metabolomics and personalized medicine. Starting with the current status of NMR-based metabolomics at the clinical level and highlighting its strengths, weaknesses and challenges, this article also explores how, far from the initial “opposition” or “competition”, NMR and MS have been integrated and have demonstrated a great complementarity, in terms of sample classification and biomarker identification. Finally, a perspective discussion provides insight into the current methodological developments that could significantly raise NMR as a more resolutive, sensitive and accessible tool for clinical applications and point-of-care diagnosis. Thanks to these advances, NMR has a strong potential to join the other analytical tools currently used in clinical settings.
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Affiliation(s)
| | | | - Pascal de Tullio
- Metabolomics Group, Center for Interdisciplinary Research of Medicine (CIRM), Department of Pharmacy, Université de Liège, Liège, Belgique
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Reimets N, Ausmees K, Vija S, Reile I. Developing Analytical Applications for Parahydrogen Hyperpolarization: Urinary Elimination Pharmacokinetics of Nicotine. Anal Chem 2021; 93:9480-9485. [PMID: 34180227 DOI: 10.1021/acs.analchem.1c01281] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Nuclear magnetic resonance spectroscopy (NMR) is a valuable analytical tool with applications in a vast array of research fields from chemistry and biology to medicine and beyond. NMR is renowned for its straightforward data interpretation and quantitative properties, making it attractive for pharmacokinetic applications, where drug metabolism pathways, concentrations, and kinetics need to be evaluated. However, pharmacologically active compounds and their metabolites in biofluids often appear in minute concentrations, well below the detection limit of NMR. Herein, we demonstrate how parahydrogen hyperpolarization overcomes this sensitivity barrier, allowing us to detect mid-nanomolar concentrations of a drug and a drug metabolite in a biofluid matrix. The performance of the method is demonstrated by monitoring nicotine and cotinine urinary elimination, reflected by their concentrations in urine during the onset and withdrawal from nicotine consumption. An NMR limit of detection of 0.1 μM and a limit of quantitation of 0.7 μM is achieved in a practical pharmacokinetics scenario where precise quantitative and qualitative analysis is desired.
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Affiliation(s)
- Nele Reimets
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, 12618 Tallinn, Estonia
| | - Kerti Ausmees
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, 12618 Tallinn, Estonia
| | - Sirje Vija
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, 12618 Tallinn, Estonia
| | - Indrek Reile
- National Institute of Chemical Physics and Biophysics, Akadeemia tee 23, 12618 Tallinn, Estonia
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26
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Robertson TBR, Gilbert N, Sutcliffe OB, Mewis RE. Hyperpolarisation of Mirfentanil by SABRE in the Presence of Heroin. Chemphyschem 2021; 22:1059-1064. [PMID: 33871116 DOI: 10.1002/cphc.202100165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 04/05/2021] [Indexed: 11/06/2022]
Abstract
Mirfentanil, a fentanyl derivative that is a μ-opioid partial agonist, is hyperpolarised via Signal Amplification By Reversible Exchange (SABRE), a para-hydrogen-based technique. [Ir(IMes)(COD)Cl] (IMes=1,3-bis(2,4,6-trimethylphenyl)imidazole-2-ylidene, COD=cyclooctadiene) was employed as the polarisation transfer catalyst. Following polarisation transfer at 6.5 mT, the pyrazine-protons were enhanced by 78-fold (polarisation, P=0.04 %). The complex [Ir(IMes)(H)2 (mirfentanil)2 (MeOH)]+ is proposed to form based on the observation of two hydrides at δ -22.9 (trans to mirfentanil) and -24.7 (trans to methanol). In a mixture of mirfentanil and heroin, the former could be detected using SABRE at concentrations less than 1 % w/w. At the lowest concentration analyzed, the amount of mirfentanil present was 0.18 mg (812 μM) and produced a signal enhancement of -867-fold (P=0.42 %). following polarisation transfer at 6.5 mT.
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Affiliation(s)
- Thomas B R Robertson
- Department of Natural Sciences, Manchester Metropolitan University, John Dalton Building, Chester St., Manchester, M1 5GD, UK.,Current address: School of Chemistry, University of Southampton, SO17 1BJ, Southampton, UK
| | - Nicolas Gilbert
- Department of Natural Sciences, Manchester Metropolitan University, John Dalton Building, Chester St., Manchester, M1 5GD, UK.,MANchester DRug Analysis and Knowledge Exchange (MANDRAKE), Manchester Metropolitan University, John Dalton Building, Chester St., Manchester, M1 5GD, UK
| | - Oliver B Sutcliffe
- Department of Natural Sciences, Manchester Metropolitan University, John Dalton Building, Chester St., Manchester, M1 5GD, UK.,MANchester DRug Analysis and Knowledge Exchange (MANDRAKE), Manchester Metropolitan University, John Dalton Building, Chester St., Manchester, M1 5GD, UK
| | - Ryan E Mewis
- Department of Natural Sciences, Manchester Metropolitan University, John Dalton Building, Chester St., Manchester, M1 5GD, UK.,MANchester DRug Analysis and Knowledge Exchange (MANDRAKE), Manchester Metropolitan University, John Dalton Building, Chester St., Manchester, M1 5GD, UK
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27
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Sellies L, Aspers R, Tessari M. Determination of hydrogen exchange and relaxation parameters in PHIP complexes at micromolar concentrations. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2021; 2:331-340. [PMID: 37904761 PMCID: PMC10539837 DOI: 10.5194/mr-2-331-2021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Accepted: 04/30/2021] [Indexed: 11/01/2023]
Abstract
Non-hydrogenative para-hydrogen-induced polarization (PHIP) is a fast, efficient and relatively inexpensive approach to enhance nuclear magnetic resonance (NMR) signals of small molecules in solution. The efficiency of this technique depends on the interplay of NMR relaxation and kinetic processes, which, at high concentrations, can be characterized by selective inversion experiments. However, in the case of dilute solutions this approach is clearly not viable. Here, we present alternative PHIP-based NMR experiments to determine hydrogen and hydride relaxation parameters as well as the rate constants for para-hydrogen association with and dissociation from asymmetric PHIP complexes at micromolar concentrations. Access to these parameters is necessary to understand and improve the PHIP enhancements of (dilute) substrates present in, for instance, biofluids and natural extracts.
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Affiliation(s)
- Lisanne Sellies
- Institute for Molecules and Materials, Radboud University, Nijmegen,
6525AJ, the Netherlands
| | - Ruud L. E. G. Aspers
- Institute for Molecules and Materials, Radboud University, Nijmegen,
6525AJ, the Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials, Radboud University, Nijmegen,
6525AJ, the Netherlands
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28
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Schievano E, Dettori A, Piana L, Tessari M. Floral origin modulates the content of a lipid marker in Apis mellifera honey. Food Chem 2021; 361:130050. [PMID: 34033992 DOI: 10.1016/j.foodchem.2021.130050] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 05/04/2021] [Accepted: 05/05/2021] [Indexed: 01/23/2023]
Abstract
The compound DAGE (DiAcyl Glyceryl Ether, 1-stearyl-2,3-dioleoyl glycerol), present in Apis mellifera honey, is a lipidic entomological marker secreted by the salivary glands of worker bees. Its content was determined by NMR, analyzing the organic extracts of a number of Italian honeys of different floral typology. We have found that the DAGE content is related to the botanical origin of honey. This dependence on floral typology was further confirmed by a linear correlation (R2 > 0.83) observed between the content of DAGE and the enzymatic activity of invertase and diastase in honey. Also these enzymes originate from bee salivary secretions and their concentrations in honey are known to depend on the floral source. DAGE content appears to be a sensitive parameter to some forms of honey manipulations, as indicated by the results of artificial bee-feeding experiments. This suggests its possible use as indicator of honey authenticity.
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Affiliation(s)
- Elisabetta Schievano
- Department of Chemical Sciences, University of Padova, via Marzolo 1, 35131 Padova, Italy.
| | - Amanda Dettori
- Piana Ricerca e Consulenza s.r.l. a socio unico, Via Umbria 41, 40024 Castel San Pietro Terme (BO), Italy
| | - Lucia Piana
- Piana Ricerca e Consulenza s.r.l. a socio unico, Via Umbria 41, 40024 Castel San Pietro Terme (BO), Italy
| | - Marco Tessari
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, the Netherlands
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29
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De Biasi F, Rosa-Gastaldo D, Mancin F, Rastrelli F. Hybrid nanoreceptors for high sensitivity detection of small molecules by NMR chemosensing. Chem Commun (Camb) 2021; 57:3002-3005. [PMID: 33623940 DOI: 10.1039/d0cc07559k] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
"Nanoparticle-assisted NMR chemosensing" combines magnetization transfer NMR techniques with the recognition abilities of gold nanoparticles (AuNPs) to isolate the NMR spectrum of relevant organic species in mixtures. The efficiency of the magnetization transfer is crucial to set the detection limit of the technique. To this aim, a second generation of nanoreceptors obtained by the self-organization of 2 nm AuNPs onto the surface of bigger silica nanoparticles shows better magnetization transfer performances, allowing the detection of analytes in water down to 10 μM concentration using standard instrumentation.
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Affiliation(s)
- Federico De Biasi
- Department of Chemical Sciences, Università degli Studi di Padova Via Marzolo 1, 35131 Padova, Italy.
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30
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Dong C, Xu Z, Wen L, He S, Wu J, Deng QH, Zhao Y. Tailoring Sensors and Solvents for Optimal Analysis of Complex Mixtures Via Discriminative 19F NMR Chemosensing. Anal Chem 2021; 93:2968-2973. [PMID: 33503366 DOI: 10.1021/acs.analchem.0c04768] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Separation-free analytic techniques capable of providing precise and real-time component information are in high demand. 19F NMR-based chemosensing, where the reversible binding between analytes and a 19F-labeled sensor produces chromatogram-like output, has emerged as a valuable tool for the rapid analysis of complex mixtures. However, the potential overlap of the 19F NMR signals still limits the number of analytes that can be effectively differentiated. In this study, we systematically investigated the influence of the sensor structure and NMR solvents on the resolution of structurally similar analytes. The substituents adjacent and distal to the 19F labels are both important to the resolving ability of the 19F-labeled sensors. More pronounced separation between 19F NMR peaks was observed in nonpolar and aromatic solvents. By using a proper sensor and solvent combination, more than 20 biologically relevant analytes can be simultaneously identified.
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Affiliation(s)
- Chanjuan Dong
- The Education Ministry Key Lab of Resource Chemistry and Shanghai Key Laboratory of Rare Earth Functional Materials, Shanghai Normal University, Shanghai 200234, P. R. China.,Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Science, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China
| | - Zhenchuang Xu
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Science, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China
| | - Lixian Wen
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Science, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China
| | - Shengyuan He
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Science, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China
| | - Jian Wu
- Instrumental Analysis Center, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China
| | - Qing-Hai Deng
- The Education Ministry Key Lab of Resource Chemistry and Shanghai Key Laboratory of Rare Earth Functional Materials, Shanghai Normal University, Shanghai 200234, P. R. China
| | - Yanchuan Zhao
- Key Laboratory of Organofluorine Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Science, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China.,Key Laboratory of Energy Regulation Materials, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Ling-Ling Road, Shanghai 200032, P. R. China
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31
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The Application of NMR Spectroscopy and Chemometrics in Authentication of Spices. Molecules 2021; 26:molecules26020382. [PMID: 33450910 PMCID: PMC7828335 DOI: 10.3390/molecules26020382] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2020] [Revised: 01/08/2021] [Accepted: 01/11/2021] [Indexed: 11/23/2022] Open
Abstract
Spices and herbs are among the most commonly adulterated food types. This is because spices are widely used to process food. Spices not only enhance the flavor and taste of food, but they are also sources of numerous bioactive compounds that are significantly beneficial for health. The healing effects of spices are connected with their antimicrobial, anti-inflammatory and carminative properties. However, regular consumption of adulterated spices may cause fatal damage to our system because adulterants in most cases are unhealthy. For that reason, the appropriate analytical methods are necessary for quality assurance and to ensure the authenticity of spices. Spectroscopic methods are gaining interest as they are fast, require little or no sample preparation, and provide rich structural information. This review provides an overview of the application of NMR spectroscopy combined with chemometric analysis to determine the quality and adulteration of spices.
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32
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De Biasi F, Mancin F, Rastrelli F. Nanoparticle-assisted NMR spectroscopy: A chemosensing perspective. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2020; 117:70-88. [PMID: 32471535 DOI: 10.1016/j.pnmrs.2019.12.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Revised: 12/16/2019] [Accepted: 12/17/2019] [Indexed: 06/11/2023]
Abstract
Sensing methodologies for the detection of target compounds in mixtures are important in many different contexts, ranging from medical diagnosis to environmental analysis and quality assessment. Ideally, such detection methods should allow for both identification and quantification of the targets, minimizing the possibility of false positives. With very few exceptions, most of the available sensing techniques rely on the selective interaction of the analyte with some detector, which in turn produces a signal as a result of the interaction. This approach hence provides indirect information on the targets, whose identity is generally ensured by comparison with known standards, if available, or by the selectivity of the sensor system itself. Pursuing a different approach, NMR chemosensing aims at generating signals directly from the analytes, in the form of a (complete) NMR spectrum. In this way, not only are the targets unequivocally identified, but it also becomes possible to identify and assign the structures of unknown species. In this review we show how relaxation- and diffusion-based NMR techniques, assisted by appropriate nanoparticles, can be used to edit the 1H NMR spectrum of a mixture and extract the signals of specific target compounds. Monolayer-protected nanoparticles, in particular those made from gold, are well suited to this task because they provide a versatile, protein-size support to build or incorporate supramolecular receptors. Remarkably, the self-organized and multifunctional nature of the nanoparticle coating allows exploitation of different kinds of non-covalent interactions, to provide tailored binding sites for virtually any class of molecules. From the NMR standpoint, the reduced translational and rotational diffusion rates of bulky nanoparticles offer a way to manipulate the states of the monolayer spins and build a reservoir of magnetization that can be selectively transferred to the interacting analytes. In addition, the low correlation time and the enhanced rigidity of the coating molecules (due to their grafting and crowding on the particle surface) promote efficient spin diffusion, useful in saturation transfer experiments. The optimized combination of NMR experiments and nanoreceptors can ultimately allow the detection of relevant analytes in the micromolar concentration range, paving the way to applications in the diagnostic field and beyond.
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Affiliation(s)
- Federico De Biasi
- Department of Chemical Sciences, Università degli Studi di Padova, via Marzolo 1, 35131 Padova, Italy
| | - Fabrizio Mancin
- Department of Chemical Sciences, Università degli Studi di Padova, via Marzolo 1, 35131 Padova, Italy
| | - Federico Rastrelli
- Department of Chemical Sciences, Università degli Studi di Padova, via Marzolo 1, 35131 Padova, Italy.
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33
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Giraudeau P. NMR-based metabolomics and fluxomics: developments and future prospects. Analyst 2020; 145:2457-2472. [DOI: 10.1039/d0an00142b] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Recent NMR developments are acting as game changers for metabolomics and fluxomics – a critical and perspective review.
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34
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Barskiy DA, Knecht S, Yurkovskaya AV, Ivanov KL. SABRE: Chemical kinetics and spin dynamics of the formation of hyperpolarization. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2019; 114-115:33-70. [PMID: 31779885 DOI: 10.1016/j.pnmrs.2019.05.005] [Citation(s) in RCA: 90] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Accepted: 05/16/2019] [Indexed: 05/22/2023]
Abstract
In this review, we present the physical principles of the SABRE (Signal Amplification By Reversible Exchange) method. SABRE is a promising hyperpolarization technique that enhances NMR signals by transferring spin order from parahydrogen (an isomer of the H2 molecule that is in a singlet nuclear spin state) to a substrate that is to be polarized. Spin order transfer takes place in a transient organometallic complex which binds both parahydrogen and substrate molecules; after dissociation of the SABRE complex, free hyperpolarized substrate molecules are accumulated in solution. An advantage of this method is that the substrate is not modified chemically, and its polarization can be regenerated multiple times by bubbling fresh parahydrogen through the solution. Thus, SABRE requires two key ingredients: (i) polarization transfer and (ii) chemical exchange of both parahydrogen and substrate. While there are several excellent reviews on applications of SABRE, the background of the method is discussed less frequently. In this review we aim to explain in detail how SABRE hyperpolarization is formed, focusing on key aspects of both spin dynamics and chemical kinetics, as well as on the interplay between them. Hence, we first cover the known spin order transfer methods applicable to SABRE - cross-relaxation, coherent spin mixing at avoided level crossings, and coherence transfer - and discuss their practical implementation for obtaining SABRE polarization in the most efficient way. Second, we introduce and explain the principle of SABRE hyperpolarization techniques that operate at ultralow (<1 μT), at low (1μT to 0.1 T) and at high (>0.1 T) magnetic fields. Finally, chemical aspects of SABRE are discussed in detail, including chemical systems that are amenable to SABRE and the exchange processes that are required for polarization formation. A theoretical treatment of the spin dynamics and their interplay with chemical kinetics is also presented. This review outlines known aspects of SABRE and provides guidelines for the design of new SABRE experiments, with the goal of solving practical problems of enhancing weak NMR signals.
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Affiliation(s)
- Danila A Barskiy
- Department of Chemistry, University of California at Berkeley, Berkeley, CA 94720, USA
| | - Stephan Knecht
- Eduard-Zintl Institute for Inorganic and Physical Chemistry, TU Darmstadt, Darmstadt 64287, Germany; Department of Radiology, Medical Physics, Medical Center - University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
| | - Alexandra V Yurkovskaya
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Novosibirsk 630090, Russia; Novosibirsk State University, Novosibirsk 630090, Russia
| | - Konstantin L Ivanov
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Novosibirsk 630090, Russia; Novosibirsk State University, Novosibirsk 630090, Russia.
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35
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Pravdivtsev AN, Hövener JB. Simulating Non-linear Chemical and Physical (CAP) Dynamics of Signal Amplification By Reversible Exchange (SABRE). Chemistry 2019; 25:7659-7668. [PMID: 30689237 DOI: 10.1002/chem.201806133] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Revised: 01/18/2019] [Indexed: 01/30/2023]
Abstract
The hyperpolarization of nuclear spins by using parahydrogen (pH2 ) is a fascinating technique that allows spin polarization and thus the magnetic resonance signal to be increased by several orders of magnitude. Entirely new applications have become available. Signal amplification by reversible exchange (SABRE) is a relatively new method that is based on the reversible exchange of a substrate, catalyst and parahydrogen. SABRE is particularly interesting for in vivo medical and industrial applications, such as fast and low-cost trace analysis or continuous signal enhancement. Ever since its discovery, many attempts have been made to model and understand SABRE, with various degrees of simplifications. In this work, we reduced the simplifications further, taking into account non-linear chemical and physical (CAP) dynamics of several multi-spin systems. A master equation was derived and realized using the MOIN open-source software. The effects of different parameters (exchange rates, concentrations, spin-spin couplings) on relaxation and the polarization level have been evaluated and the results provide interesting insights into the mechanism of SABRE.
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Affiliation(s)
- Andrey N Pravdivtsev
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein (UKSH), Kiel University, Am Botanischen Garten 14, 24118, Kiel, Germany
| | - Jan-Bernd Hövener
- Section Biomedical Imaging, Molecular Imaging North Competence Center (MOIN CC), Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein (UKSH), Kiel University, Am Botanischen Garten 14, 24118, Kiel, Germany
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36
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Bordonali L, Nordin N, Fuhrer E, MacKinnon N, Korvink JG. Parahydrogen based NMR hyperpolarisation goes micro: an alveolus for small molecule chemosensing. LAB ON A CHIP 2019; 19:503-512. [PMID: 30627714 PMCID: PMC6369676 DOI: 10.1039/c8lc01259h] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2018] [Accepted: 01/03/2019] [Indexed: 05/17/2023]
Abstract
Complex mixtures, commonly encountered in metabolomics and food analytics, are now routinely measured by nuclear magnetic resonance (NMR) spectroscopy. Since many samples must be measured, one-dimensional proton (1D 1H) spectroscopy is the experiment of choice. A common challenge in complex mixture 1H NMR spectroscopy is spectral crowding, which limits the assignment of molecular components to those molecules in relatively high abundance. This limitation is exacerbated when the sample quantity itself is limited and concentrations are reduced even further during sample preparation for routine measurement. To address these challenges, we report a novel microfluidic NMR platform integrating signal enhancement via parahydrogen induced hyperpolarisation. The platform simultaneously addresses the challenges of handling small sample quantities through microfluidics, the associated decrease in signal given the reduced sample quantity by Signal Amplification by Reversible Exchange (SABRE), and overcoming spectral crowding by taking advantage of the chemosensing aspect of the SABRE effect. SABRE at the microscale is enabled by an integrated PDMS membrane alveolus, which provides bubble-free hydrogen gas contact with the sample solution. With this platform, we demonstrate high field NMR chemosensing of microliter sample volumes, nanoliter detection volumes, and micromolar concentrations corresponding to picomole molecular sensitivity.
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Affiliation(s)
- Lorenzo Bordonali
- Institute for Microtechnology, Karlsruhe Institute for Technology, Hermann-von-Helmholtz Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
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37
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Sellies L, Reile I, Aspers RLEG, Feiters MC, Rutjes FPJT, Tessari M. Parahydrogen induced hyperpolarization provides a tool for NMR metabolomics at nanomolar concentrations. Chem Commun (Camb) 2019; 55:7235-7238. [DOI: 10.1039/c9cc02186h] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Sensitivity enhancement by parahydrogen hyperpolarization allows NMR detection and quantification of hundreds of urinary metabolites at down to nanomolar concentrations.
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Affiliation(s)
- Lisanne Sellies
- Institute for Molecules and Materials, Radboud University
- 6525 AJ Nijmegen
- The Netherlands
| | - Indrek Reile
- National Institute of Chemical Physics and Biophysics
- 12618 Tallinn
- Estonia
| | - Ruud L. E. G. Aspers
- Institute for Molecules and Materials, Radboud University
- 6525 AJ Nijmegen
- The Netherlands
| | - Martin C. Feiters
- Institute for Molecules and Materials, Radboud University
- 6525 AJ Nijmegen
- The Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and Materials, Radboud University
- 6525 AJ Nijmegen
- The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials, Radboud University
- 6525 AJ Nijmegen
- The Netherlands
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38
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Jeong K, Min S, Chae H, Namgoong SK. Detecting low concentrations of unsaturated C-C bonds by parahydrogen-induced polarization using an efficient home-built parahydrogen generator. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2018; 56:1089-1093. [PMID: 29856897 DOI: 10.1002/mrc.4756] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2018] [Revised: 05/11/2018] [Accepted: 05/24/2018] [Indexed: 06/08/2023]
Abstract
Parahydrogen is a potentially significant source of hyperpolarization. However, a heat exchanger at an ultralow temperature, which is normally sustained wastefully using liquid nitrogen, is essential for the generation of hyperpolarized parahydrogen. In order to cut down on the use of liquid nitrogen, we employed a cryogenic storage dewar as the key component of our home-built parahydrogen generator, which lasted over 20 days with a single filling. Small concentrations of an unsaturated compound in a mixture were identified by hydrogenation in a principle-based experiment involving the use of hyperpolarization and phase difference. Less than 1 μl of styrene in 1 ml of chloroform was identified in a single scan with a 43 MHz benchtop nuclear magnetic resonance (NMR) spectrometer following hydrogenation with 50% parahydrogen. This method can potentially undergo a significant development through the use of high-field NMR techniques, higher parahydrogen concentrations, and increased scan times for data collection, among others. Because hydrogenation with parahydrogen induces a phase reversal during attachment to unsaturated CC bonds, it may be possible to detect many other unsaturated bonds in organic molecules. All in all, this study not only broadens the research on parahydrogen-based unsaturated-bond detection, but also facilitates the use of hyperpolarization by a broader range of researchers through the introduction of a long-lasting home-built parahydrogen generator.
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Affiliation(s)
- Keunhong Jeong
- Department of Chemistry, Korea Military Academy, Seoul, 01805, South Korea
| | - Sein Min
- Department of Chemistry, Seoul Women's University, Seoul, 01797, South Korea
| | - Heelim Chae
- Department of Chemistry, Seoul Women's University, Seoul, 01797, South Korea
| | - Sung Keon Namgoong
- Department of Chemistry, Seoul Women's University, Seoul, 01797, South Korea
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39
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Reile I, Eshuis N, Hermkens NKJ, van Weerdenburg BJA, Feiters MC, Rutjes FPJT, Tessari M. NMR detection in biofluid extracts at sub-μM concentrations via para-H2 induced hyperpolarization. Analyst 2018; 141:4001-5. [PMID: 27221513 DOI: 10.1039/c6an00804f] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
NMR spectroscopy is one of the most powerful techniques to simultaneously obtain qualitative and quantitative information in chemical analysis. Despite its versatility, the applications of NMR in the study of biofluids are often limited by the insensitivity of the technique, further aggravated by the poor signal dispersion in the (1)H spectra. Recent advances in para-H2 induced hyperpolarization have proven to address both these limitations for specific classes of compounds. Herein, this approach is for the first time applied for quantitative determination in biofluid extracts. We demonstrate that a combination of solid phase extraction, para-hydrogen induced hyperpolarization and selective NMR detection quickly reveals a doping substance, nikethamide, at sub-μM concentrations in urine. We suggest that this method can be further optimized for the detection of different analytes in various biofluids, anticipating a wider application of hyperpolarized NMR in metabolomics and pharmacokinetics studies in the near future.
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Affiliation(s)
- I Reile
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - N Eshuis
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - N K J Hermkens
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - B J A van Weerdenburg
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - M C Feiters
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - F P J T Rutjes
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - M Tessari
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
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40
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Hermkens NKJ, Aspers RLEG, Feiters MC, Rutjes FPJT, Tessari M. Trace analysis in water-alcohol mixtures by continuous p-H 2 hyperpolarization at high magnetic field. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2018; 56:633-640. [PMID: 29220098 DOI: 10.1002/mrc.4692] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2017] [Revised: 11/22/2017] [Accepted: 11/25/2017] [Indexed: 05/22/2023]
Abstract
Nuclear magnetic resonance (NMR) studies of complex mixtures are often limited by the low sensitivity of the technique and by spectral overlap. We have recently reported on an NMR chemosensor on the basis of para-Hydrogen Induced Polarization that potentially addresses both these issues, albeit for specific classes of compounds. This approach makes use of Signal Amplification By Reversible Exchange (SABRE) catalysts in methanol and allows selective detection and quantification of dilute analytes in complex mixtures. Herein, we demonstrate that, despite a large decrease in attained hyperpolarization, this method can be extended to water-alcohol mixtures. Our approach was tested on whisky, where nitrogenous heterocyclic flavor components at low-micromolar concentration could be detected and quantified.
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Affiliation(s)
- Niels K J Hermkens
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen, 6525AJ, The Netherlands
| | - Ruud L E G Aspers
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen, 6525AJ, The Netherlands
| | - Martin C Feiters
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen, 6525AJ, The Netherlands
| | - Floris P J T Rutjes
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen, 6525AJ, The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen, 6525AJ, The Netherlands
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41
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Rayner PJ, Duckett SB. Signal Amplification by Reversible Exchange (SABRE): From Discovery to Diagnosis. Angew Chem Int Ed Engl 2018; 57:6742-6753. [DOI: 10.1002/anie.201710406] [Citation(s) in RCA: 76] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Revised: 12/12/2017] [Indexed: 11/10/2022]
Affiliation(s)
- Peter J. Rayner
- Centre of Hyperpolarisation in Magnetic Resonance, Department of Chemistry; University of York; Heslington YO10 5DD UK
| | - Simon B. Duckett
- Centre of Hyperpolarisation in Magnetic Resonance, Department of Chemistry; University of York; Heslington YO10 5DD UK
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42
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Rayner PJ, Duckett SB. Signalverstärkung durch reversiblen Austausch (SABRE): von der Entdeckung zur diagnostischen Anwendung. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201710406] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Peter J. Rayner
- Centre of Hyperpolarisation in Magnetic Resonance, Department of Chemistry; University of York; Heslington YO10 5DD Großbritannien
| | - Simon B. Duckett
- Centre of Hyperpolarisation in Magnetic Resonance, Department of Chemistry; University of York; Heslington YO10 5DD Großbritannien
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43
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Farjon J, Milande C, Martineau E, Akoka S, Giraudeau P. The FAQUIRE Approach: FAst, QUantitative, hIghly Resolved and sEnsitivity Enhanced 1H, 13C Data. Anal Chem 2018; 90:1845-1851. [PMID: 29303255 DOI: 10.1021/acs.analchem.7b03874] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
The targeted analysis of metabolites in complex mixtures is a challenging issue. NMR is one of the major tools in this field, but there is a strong need for more sensitive, better-resolved, and faster quantitative methods. In this framework, we introduce the concept of FAst, QUantitative, hIghly Resolved and sEnsitivity enhanced (FAQUIRE) NMR to push forward the limits of metabolite NMR analysis. 2D 1H, 13C 2D quantitative maps are promising alternatives for enhancing the spectral resolution but are highly time-consuming because of (i) the intrinsic nature of 2D, (ii) the longer recycling times required for quantitative conditions, and (iii) the higher number of scans needed to reduce the level of detection/quantification to access low concentrated metabolites. To reach this aim, speeding up the recently developed QUantItative Perfected and pUre shifted HSQC (QUIPU HSQC) is an interesting attempt to develop the FAQUIRE concept. Thanks to the combination of spectral aliasing, nonuniform sampling, and variable repetition time, the acquisition time of 2D quantitative maps is reduced by a factor 6 to 9, while conserving a high spectral resolution thanks to a pure shift approach. The analytical potential of the new Quick QUIPU HSQC (Q QUIPU HSQC) is evaluated on a model metabolite sample, and its potential is shown on breast-cell extracts embedding metabolites at millimolar to submillimolar concentrations.
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Affiliation(s)
- Jonathan Farjon
- Faculté des Sciences et Techniques de Nantes, UMR CNRS 6230- CEISAM, Equipe EBSI, LUNAM Université , 44322 Nantes, France
| | - Clément Milande
- Faculté des Sciences et Techniques de Nantes, UMR CNRS 6230- CEISAM, Equipe EBSI, LUNAM Université , 44322 Nantes, France
| | - Estelle Martineau
- Faculté des Sciences et Techniques de Nantes, UMR CNRS 6230- CEISAM, Equipe EBSI, LUNAM Université , 44322 Nantes, France.,SpectroMaitrise, CAPACITÉS SAS, 26 Bd Vincent Gâche, 44200 Nantes, France
| | - Serge Akoka
- Faculté des Sciences et Techniques de Nantes, UMR CNRS 6230- CEISAM, Equipe EBSI, LUNAM Université , 44322 Nantes, France
| | - Patrick Giraudeau
- Faculté des Sciences et Techniques de Nantes, UMR CNRS 6230- CEISAM, Equipe EBSI, LUNAM Université , 44322 Nantes, France.,Institut Universitaire de France , 1 rue Descartes, 75005 Paris CEDEX 05, France
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44
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Olaru AM, Robertson TBR, Lewis JS, Antony A, Iali W, Mewis RE, Duckett SB. Extending the Scope of 19F Hyperpolarization through Signal Amplification by Reversible Exchange in MRI and NMR Spectroscopy. ChemistryOpen 2017; 7:97-105. [PMID: 29318102 PMCID: PMC5754555 DOI: 10.1002/open.201700166] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2017] [Indexed: 01/21/2023] Open
Abstract
Fluorinated ligands have a variety of uses in chemistry and industry, but it is their medical applications as 18F-labelled positron emission tomography (PET) tracers where they are most visible. In this work, we illustrate the potential of using 19F-containing ligands as future magnetic resonance imaging (MRI) contrast agents and as probes in magnetic resonance spectroscopy studies by significantly increasing their magnetic resonance detectability through the signal amplification by reversible exchange (SABRE) hyperpolarization method. We achieve 19F SABRE polarization in a wide range of molecules, including those essential to medication, and analyze how their steric bulk, the substrate loading, polarization transfer field, pH, and rate of ligand exchange impact the efficiency of SABRE. We conclude by presenting 19F MRI results in phantoms, which demonstrate that many of these agents show great promise as future 19F MRI contrast agents for diagnostic investigations.
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Affiliation(s)
- Alexandra M Olaru
- Centre for Hyperpolarization in Magnetic Resonance, Department of Chemistry University of York Heslington YO10 5NY United Kingdom
| | - Thomas B R Robertson
- School of Science and the Environment, Division of Chemistry and Environmental Science Manchester Metropolitan University John Dalton Building, Chester St. Manchester M1 5GD United Kingdom
| | - Jennifer S Lewis
- Centre for Hyperpolarization in Magnetic Resonance, Department of Chemistry University of York Heslington YO10 5NY United Kingdom
| | - Alex Antony
- School of Science and the Environment, Division of Chemistry and Environmental Science Manchester Metropolitan University John Dalton Building, Chester St. Manchester M1 5GD United Kingdom
| | - Wissam Iali
- Centre for Hyperpolarization in Magnetic Resonance, Department of Chemistry University of York Heslington YO10 5NY United Kingdom
| | - Ryan E Mewis
- School of Science and the Environment, Division of Chemistry and Environmental Science Manchester Metropolitan University John Dalton Building, Chester St. Manchester M1 5GD United Kingdom
| | - Simon B Duckett
- Centre for Hyperpolarization in Magnetic Resonance, Department of Chemistry University of York Heslington YO10 5NY United Kingdom
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45
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Deborde C, Moing A, Roch L, Jacob D, Rolin D, Giraudeau P. Plant metabolism as studied by NMR spectroscopy. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2017; 102-103:61-97. [PMID: 29157494 DOI: 10.1016/j.pnmrs.2017.05.001] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Revised: 05/19/2017] [Accepted: 05/22/2017] [Indexed: 05/07/2023]
Abstract
The study of plant metabolism impacts a broad range of domains such as plant cultural practices, plant breeding, human or animal nutrition, phytochemistry and green biotechnologies. Plant metabolites are extremely diverse in terms of structure or compound families as well as concentrations. This review attempts to illustrate how NMR spectroscopy, with its broad variety of experimental approaches, has contributed widely to the study of plant primary or specialized metabolism in very diverse ways. The review presents recent developments of one-dimensional and multi-dimensional NMR methods to study various aspects of plant metabolism. Through recent examples, it highlights how NMR has proved to be an invaluable tool for the global characterization of sample composition within metabolomic studies, and shows some examples of use for targeted phytochemistry, with a special focus on compound identification and quantitation. In such cases, NMR approaches are often used to provide snapshots of the plant sample composition. The review also covers dynamic aspects of metabolism, with a description of NMR techniques to measure metabolic fluxes - in most cases after stable isotope labelling. It is mainly intended for NMR specialists who would be interested to learn more about the potential of their favourite technique in plant sciences and about specific details of NMR approaches in this field. Therefore, as a practical guide, a paragraph on the specific precautions that should be taken for sample preparation is also included. In addition, since the quality of NMR metabolic studies is highly dependent on approaches to data processing and data sharing, a specific part is dedicated to these aspects. The review concludes with perspectives on the emerging methods that could change significantly the role of NMR in the field of plant metabolism by boosting its sensitivity. The review is illustrated throughout with examples of studies selected to represent diverse applications of liquid-state or HR-MAS NMR.
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Affiliation(s)
- Catherine Deborde
- INRA, UMR 1332 Biologie du Fruit et Pathologie, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France; Plateforme Métabolome Bordeaux - MetaboHUB, Centre de Génomique Fonctionnelle Bordeaux, IBVM, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France
| | - Annick Moing
- INRA, UMR 1332 Biologie du Fruit et Pathologie, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France; Plateforme Métabolome Bordeaux - MetaboHUB, Centre de Génomique Fonctionnelle Bordeaux, IBVM, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France
| | - Léa Roch
- INRA, UMR 1332 Biologie du Fruit et Pathologie, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France; Plateforme Métabolome Bordeaux - MetaboHUB, Centre de Génomique Fonctionnelle Bordeaux, IBVM, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France
| | - Daniel Jacob
- INRA, UMR 1332 Biologie du Fruit et Pathologie, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France; Plateforme Métabolome Bordeaux - MetaboHUB, Centre de Génomique Fonctionnelle Bordeaux, IBVM, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France
| | - Dominique Rolin
- Plateforme Métabolome Bordeaux - MetaboHUB, Centre de Génomique Fonctionnelle Bordeaux, IBVM, Centre INRA Bordeaux, F-33140 Villenave d'Ornon, France; Univ. Bordeaux, UMR1332, Biologie du Fruit et Pathologie, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France
| | - Patrick Giraudeau
- Chimie et Interdisciplinarité: Synthèse, Analyse, Modélisation (CEISAM), UMR 6230, CNRS, Université de Nantes, Faculté des Sciences, BP 92208, 2 rue de la Houssinière, F-44322 Nantes Cedex 03, France; Institut Universitaire de France, 1 rue Descartes, 75005 Paris, France.
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46
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Reile I, Aspers RLEG, Tyburn JM, Kempf JG, Feiters MC, Rutjes FPJT, Tessari M. DOSY Analysis of Micromolar Analytes: Resolving Dilute Mixtures by SABRE Hyperpolarization. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201703577] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Indrek Reile
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Ruud L. E. G. Aspers
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | | | | | - Martin C. Feiters
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
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47
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Reile I, Aspers RLEG, Tyburn JM, Kempf JG, Feiters MC, Rutjes FPJT, Tessari M. DOSY Analysis of Micromolar Analytes: Resolving Dilute Mixtures by SABRE Hyperpolarization. Angew Chem Int Ed Engl 2017; 56:9174-9177. [DOI: 10.1002/anie.201703577] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2017] [Revised: 05/25/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Indrek Reile
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Ruud L. E. G. Aspers
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | | | | | - Martin C. Feiters
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
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48
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Colell JP, Logan AWJ, Zhou Z, Shchepin RV, Barskiy DA, Ortiz GX, Wang Q, Malcolmson SJ, Chekmenev EY, Warren WS, Theis T. Generalizing, Extending, and Maximizing Nitrogen-15 Hyperpolarization Induced by Parahydrogen in Reversible Exchange. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2017; 121:6626-6634. [PMID: 28392884 PMCID: PMC5378067 DOI: 10.1021/acs.jpcc.6b12097] [Citation(s) in RCA: 106] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Revised: 01/13/2017] [Indexed: 05/17/2023]
Abstract
Signal Amplification by Reversible Exchange (SABRE) is a fast and convenient NMR hyperpolarization method that uses cheap and readily available para-hydrogen as a hyperpolarization source. SABRE can hyperpolarize protons and heteronuclei. Here we focus on the heteronuclear variant introduced as SABRE-SHEATH (SABRE in SHield Enables Alignment Transfer to Heteronuclei) and nitrogen-15 targets in particular. We show that 15N-SABRE works more efficiently and on a wider range of substrates than 1H-SABRE, greatly generalizing the SABRE approach. In addition, we show that nitrogen-15 offers significantly extended T1 times of up to 12 minutes. Long T1 times enable higher hyperpolarization levels but also hold the promise of hyperpolarized molecular imaging for several tens of minutes. Detailed characterization and optimization are presented, leading to nitrogen-15 polarization levels in excess of 10% on several compounds.
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Affiliation(s)
- Johannes
F. P. Colell
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Angus W. J. Logan
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Zijian Zhou
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Roman V. Shchepin
- Vanderbilt
University Institute of Imaging Science (VUIIS), Department of Radiology,
Department of Biomedical Engineering, Vanderbilt Ingram Cancer Center
(VICC), Vanderbilt University, Nashville, Tennessee 37232, United States
| | - Danila A. Barskiy
- Vanderbilt
University Institute of Imaging Science (VUIIS), Department of Radiology,
Department of Biomedical Engineering, Vanderbilt Ingram Cancer Center
(VICC), Vanderbilt University, Nashville, Tennessee 37232, United States
| | - Gerardo X. Ortiz
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Qiu Wang
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Steven J. Malcolmson
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Eduard Y. Chekmenev
- Vanderbilt
University Institute of Imaging Science (VUIIS), Department of Radiology,
Department of Biomedical Engineering, Vanderbilt Ingram Cancer Center
(VICC), Vanderbilt University, Nashville, Tennessee 37232, United States
- Russian
Academy of Sciences, Moscow, Russia
| | - Warren S. Warren
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
- Departments
of Physics, Radiology and Biomedical Engineering, Duke University, Durham, North Carolina 27707, United States
- E-mail:
| | - Thomas Theis
- Department
of Chemistry, Duke University, Durham, North Carolina 27708, United States
- E-mail:
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49
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Hermkens NKJ, Feiters MC, Rutjes FPJT, Wijmenga SS, Tessari M. High field hyperpolarization-EXSY experiment for fast determination of dissociation rates in SABRE complexes. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2017; 276:122-127. [PMID: 28183024 DOI: 10.1016/j.jmr.2017.01.011] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2016] [Revised: 01/16/2017] [Accepted: 01/17/2017] [Indexed: 06/06/2023]
Abstract
SABRE (Signal Amplification By Reversible Exchange) is a nuclear spin hyperpolarization technique based on the reversible concurrent binding of small molecules and para-hydrogen (p-H2) to an iridium metal complex in solution. At low magnetic field, spontaneous conversion of p-H2 spin order to enhanced longitudinal magnetization of the nuclear spins of the other ligands occurs. Subsequent complex dissociation results in hyperpolarized substrate molecules in solution. The lifetime of this complex plays a crucial role in attained SABRE NMR signal enhancements. Depending on the ligands, vastly different dissociation rates have been previously measured using EXSY or selective inversion experiments. However, both these approaches are generally time-consuming due to the long recycle delays (up to 2min) necessary to reach thermal equilibrium for the nuclear spins of interest. In the cases of dilute solutions, signal averaging aggravates the problem, further extending the experimental time. Here, a new approach is proposed based on coherent hyperpolarization transfer to substrate protons in asymmetric complexes at high magnetic field. We have previously shown that such asymmetric complexes are important for application of SABRE to dilute substrates. Our results demonstrate that a series of high sensitivity EXSY spectra can be collected in a short experimental time thanks to the NMR signal enhancement and much shorter recycle delay.
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Affiliation(s)
- Niels K J Hermkens
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Martin C Feiters
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Floris P J T Rutjes
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Sybren S Wijmenga
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Marco Tessari
- Radboud University, Institute for Molecules and Materials, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
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50
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Wist J. Complex mixtures by NMR and complex NMR for mixtures: experimental and publication challenges. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2017; 55:22-28. [PMID: 27668407 DOI: 10.1002/mrc.4533] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2016] [Revised: 09/14/2016] [Accepted: 09/22/2016] [Indexed: 06/06/2023]
Abstract
Untargeted strategies have changed the rules of the game in complex mixture analysis, introducing an amazing potential for medical and biological applications that is just starting to be tapped. But with great power come great challenges; although untargeted mixture analysis opens the road for many exciting possibilities, the road is still full of perils. On the one hand, this article highlights some of the difficulties that need to be sorted for mixture analysis by NMR to fulfill its potential, along with insight on how they may be managed. Highlighted key points include the need for 'computer friendly' solutions for sharing data, experimental design and algorithm to facilitate the steady growth of knowledge and modeling ability in the field, and the need for large-scale studies to improve confidence in newly identified biomarkers. On the other hand, the second part of this article presents some breakthroughs in NMR experiments that, when combined, may modify the landscape of mixture analysis. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Julien Wist
- Chemistry Department, Universidad del Valle, Cali, Colombia
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