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Chomphunuch T, La-Ongthong K, Katrun P, Sawektreeratana N, Keawkla N, Soorukram D, Leowanawat P, Reutrakul V, Surawatanawong P, Bunchuay T, Kuhakarn C. Electrochemically Driven Site-Selective N-Hydroxymethylation of Indoles and Derivatives. Chem Asian J 2025; 20:e202401489. [PMID: 39746853 DOI: 10.1002/asia.202401489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2024] [Revised: 12/28/2024] [Accepted: 01/02/2025] [Indexed: 01/04/2025]
Abstract
Described herein is a facile electrochemical strategy for the generation of formaldehyde from N,N-dimethylacetamide (DMA) and water (H2O) toward a direct and site-selective N-hydroxymethylation of indoles and derivatives. Mechanistic studies suggested that N-(hydroxymethyl)-N-methylacetamide generated in situ from DMA/H2O under electrochemical conditions serves as a formaldehyde surrogate. The developed methodology features mild, base- and metal catalyst-free conditions. The reaction can accommodate a broad range of substrate scopes and offers an alternative route to access a series of N-hydroxymethylated indole, bis-indole, carbazole, and indazole derivatives. A gram-scale synthesis was demonstrated to show the scaled-up applicability of this transformation.
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Affiliation(s)
- Thanathip Chomphunuch
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Kannika La-Ongthong
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Praewpan Katrun
- Department of Chemistry, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand
| | - Natthapat Sawektreeratana
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Natchayatorn Keawkla
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Darunee Soorukram
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Pawaret Leowanawat
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Vichai Reutrakul
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Panida Surawatanawong
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Thanthapatra Bunchuay
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
| | - Chutima Kuhakarn
- Department of Chemistry, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
- Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand
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2
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Shi Q, Zhang B, Wu Z, Yang D, Wu H, Shi J, Jiang Z. Cascade Catalytic Systems for Converting CO 2 into C 2+ Products. CHEMSUSCHEM 2025; 18:e202401916. [PMID: 39564785 DOI: 10.1002/cssc.202401916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2024] [Revised: 11/19/2024] [Accepted: 11/19/2024] [Indexed: 11/21/2024]
Abstract
The excessive emission and continuous accumulation of CO2 have precipitated serious social and environmental issues. However, CO2 can also serve as an abundant, inexpensive, and non-toxic renewable C1 carbon source for synthetic reactions. To achieve carbon neutrality and recycling, it is crucial to convert CO2 into value-added products through chemical pathways. Multi-carbon (C2+) products, compared to C1 products, offer a broader range of applications and higher economic returns. Despite this, converting CO2 into C2+ products is difficult due to its stability and the high energy required for C-C coupling. Cascade catalytic reactions offer a solution by coordinating active components, promoting intermediate transfers, and facilitating further transformations. This method lowers energy consumption. Recent advancements in cascade catalytic systems have allowed for significant progress in synthesizing C2+ products from CO2. This review highlights the features and advantages of cascade catalysis strategies, explores the synergistic effects among active sites, and examines the mechanisms within these systems. It also outlines future prospects for CO2 cascade catalytic synthesis, offering a framework for efficient CO2 utilization and the development of next-generation catalytic systems.
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Affiliation(s)
- Qiaochu Shi
- School of Environmental Science & Engineering, Tianjin University, Tianjin, 300072, China
| | - Boyu Zhang
- School of Environmental Science & Engineering, Tianjin University, Tianjin, 300072, China
| | - Zhenhua Wu
- School of Environmental Science & Engineering, Tianjin University, Tianjin, 300072, China
| | - Dong Yang
- School of Chemical Engineering & Engineering, Tianjin University, Tianjin, 300072, China
| | - Hong Wu
- School of Chemical Engineering & Engineering, Tianjin University, Tianjin, 300072, China
| | - Jiafu Shi
- School of Environmental Science & Engineering, Tianjin University, Tianjin, 300072, China
| | - Zhongyi Jiang
- School of Chemical Engineering & Engineering, Tianjin University, Tianjin, 300072, China
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3
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Hollmann L, Blank LM, Grünberger A. Flow fermentation: microsystems for whole-cell bioproduction processes. Trends Biotechnol 2025:S0167-7799(24)00386-X. [PMID: 39890503 DOI: 10.1016/j.tibtech.2024.12.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2024] [Revised: 12/03/2024] [Accepted: 12/24/2024] [Indexed: 02/03/2025]
Abstract
Industrial biotechnology utilizes whole cells for the production of value-added goods in large-scale bioreactors. The miniaturization of bioreactors has greatly contributed to the understanding and optimization of bioprocesses. However, microsystems for the production of value-added goods have thus far only been established in chemistry and biocatalysis/biotransformation but are rarely applied for whole-cell bioprocesses. Here, we discuss the fundamental and translational aspects of how microsystems could be used as production units for future whole-cell bioproduction processes. The characteristics and resulting advantages of microsystems are introduced and current production approaches are highlighted. Finally, we provide perspectives on establishing future whole-cell bioproduction processes at the microscale, here introduced as flow fermentation. Flow fermentation potentially enables entirely new bioprocesses and application fields.
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Affiliation(s)
- Lina Hollmann
- Institute of Process Engineering in Life Sciences, Microsystems in Bioprocess Engineering (MBVT), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 2, 76131 Karlsruhe, Germany
| | - Lars M Blank
- Institute of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, 52074 Aachen, Germany
| | - Alexander Grünberger
- Institute of Process Engineering in Life Sciences, Microsystems in Bioprocess Engineering (MBVT), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 2, 76131 Karlsruhe, Germany.
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4
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Lee SH, Lee TJ, Sarkar S, Cho H, Nhu QPN, Chang YT. Atom-Efficient Synthesis of Trimethine Cyanines Using Formaldehyde as a Single-Carbon Source. Angew Chem Int Ed Engl 2025; 64:e202413121. [PMID: 39291296 DOI: 10.1002/anie.202413121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Revised: 09/11/2024] [Accepted: 09/13/2024] [Indexed: 09/19/2024]
Abstract
Herein, we present an innovative and atom-efficient synthesis of trimethine cyanines (Cy3) using formaldehyde (FA) as a single-carbon reagent. The widespread application of Cy3 dyes in bioimaging and genomics/proteomics is often limited by synthetic routes plagued by low atom economy and substantial side-product formation. Through systematic investigation, we have developed a practical and efficient synthetic pathway for both symmetrical and unsymmetrical Cy3 derivatives, significantly minimizing resource utilization. Notably, this approach yields water as the by-product, in alignment with sustainable chemistry principles. Moreover, the efficient one-pot synthesis facilitates the detection of intracellular FA levels, utilizing the fluorescence signal of Cy3 in live cells. It is also possible to detect endogenous FA in the intestinal tissues. We observed a significant decrease in FA in the small intestine of inflammatory bowel disease (IBD) mice as compared to healthy mice. This methodological advancement not only enhances the scope of fluorescent dye synthesis but also contributes to sustainable practices within chemical manufacturing, offering a significant leap forward in the development of environmentally friendly synthetic strategies.
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Affiliation(s)
- Sun Hyeok Lee
- Basic Science Research Institute (BSRI), Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea
| | - Taek-Jun Lee
- Department of Chemistry, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea
| | | | - Heewon Cho
- Department of Chemistry, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea
| | - Quynh Pham Nguyen Nhu
- Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand
| | - Young-Tae Chang
- Department of Chemistry, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea
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5
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Klos N, Osterthun O, Mengers HG, Lanzerath P, Graf von Westarp W, Lim G, Gausmann M, Küsters-Spöring JD, Wiesenthal J, Guntermann N, Lauterbach L, Jupke A, Leitner W, Blank LM, Klankermayer J, Rother D. Concatenating Microbial, Enzymatic, and Organometallic Catalysis for Integrated Conversion of Renewable Carbon Sources. JACS AU 2024; 4:4546-4570. [PMID: 39735920 PMCID: PMC11672146 DOI: 10.1021/jacsau.4c00511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/14/2024] [Revised: 10/08/2024] [Accepted: 10/08/2024] [Indexed: 12/31/2024]
Abstract
The chemical industry can now seize the opportunity to improve the sustainability of its processes by replacing fossil carbon sources with renewable alternatives such as CO2, biomass, and plastics, thereby thinking ahead and having a look into the future. For their conversion to intermediate and final products, different types of catalysts-microbial, enzymatic, and organometallic-can be applied. The first part of this review shows how these catalysts can work separately in parallel, each route with unique requirements and advantages. While the different types of catalysts are often seen as competitive approaches, an increasing number of examples highlight, how combinations and concatenations of catalysts of the complete spectrum can open new roads to new products. Therefore, the second part focuses on the different catalysts either in one-step, one-pot transformations or in reaction cascades. In the former, the reaction conditions must be conflated but purification steps are minimized. In the latter, each catalyst can work under optimal conditions and the "hand-over points" should be chosen according to defined criteria like minimal energy usage during separation procedures. The examples are discussed in the context of the contributions of catalysis to the envisaged (bio)economy.
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Affiliation(s)
- Nina Klos
- Institute
of Bio- and Geosciences 1: Biotechnology (IBG-1), Forschungszentrum Jülich GmbH, Jülich, Nordrhein-Westfalen 52428, Germany
- Institute
of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Ole Osterthun
- Institute
of Technical and Macromolecular Chemistry (ITMC), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Hendrik G. Mengers
- Institute
of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Patrick Lanzerath
- Institute
of Technical and Macromolecular Chemistry (ITMC), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - William Graf von Westarp
- Fluid
Process Engineering (AVT.FVT), RWTH Aachen
University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Guiyeoul Lim
- Institute
of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Marcel Gausmann
- Fluid
Process Engineering (AVT.FVT), RWTH Aachen
University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Jan-Dirk Küsters-Spöring
- Institute
of Bio- and Geosciences 1: Biotechnology (IBG-1), Forschungszentrum Jülich GmbH, Jülich, Nordrhein-Westfalen 52428, Germany
- Institute
of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Jan Wiesenthal
- Institute
of Technical and Macromolecular Chemistry (ITMC), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Nils Guntermann
- Institute
of Technical and Macromolecular Chemistry (ITMC), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Lars Lauterbach
- Institute
of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Andreas Jupke
- Fluid
Process Engineering (AVT.FVT), RWTH Aachen
University, Aachen, Nordrhein-Westfalen 52074, Germany
- Institute
of Bio- and Geosciences 2: Plant Science (IBG-2), Forschungszentrum Jülich GmbH, Jülich, Nordrhein-Westfalen 52428, Germany
| | - Walter Leitner
- Institute
of Technical and Macromolecular Chemistry (ITMC), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
- Max-Planck-Institute
for Chemical Energy Conversion, Mülheim an der Ruhr, Nordrhein-Westfalen 45470, Germany
| | - Lars M. Blank
- Institute
of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Jürgen Klankermayer
- Institute
of Technical and Macromolecular Chemistry (ITMC), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
| | - Dörte Rother
- Institute
of Bio- and Geosciences 1: Biotechnology (IBG-1), Forschungszentrum Jülich GmbH, Jülich, Nordrhein-Westfalen 52428, Germany
- Institute
of Applied Microbiology (iAMB), Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Aachen, Nordrhein-Westfalen 52074, Germany
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6
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Li H, Zhang Z, Ho W, Huang Y, Chen M, Ge X. Predominance of aminated water interfaces on transition-metal nanoparticulate to enhance synergetic removal of carbonyls and inhibition of CO 2 production. ENVIRONMENTAL RESEARCH 2024; 263:120042. [PMID: 39307230 DOI: 10.1016/j.envres.2024.120042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Revised: 08/18/2024] [Accepted: 09/19/2024] [Indexed: 09/27/2024]
Abstract
In the context of the air quality co-benefits of carbon neutrality, conventional strategies for the end-of-pipe control aimed at reducing volatile organic compounds (VOCs) to carbon dioxide (CO2) require a more realistic revision. This study explored the synergetic removal of carbonyls with low carbon emission by amine-functionalized manganese dioxide (MnO2), obtained through a method involving freezing-thawing cycles. Molecular-level characterization revealed that an ordered array of interfacial water dimers (H5O2+, a class of water-proton clusters) on the MnO2 surface enhanced the robust bonding of metal sites with amino groups. Amine-functionalized MnO2 can be negatively charged under environmental acidity to further interfacial proton-coupled electron transfers. This cooperativity in interfacial chemical processes promoted the selective conversion of carbonyl carbons to bicarbonated amides (NH3+HCO3-), serving as a reservoir of CO2. In comparison to a commercially used 2,4-dinitrophenylhydrazine (DNPH) control, this approach achieved nearly complete removal of a priority carbonyl mixture containing formaldehyde, acetaldehyde, and acetone synergically. The formation of secondary organic compounds in the gas phase and CO2 off-gas were suppressed.
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Affiliation(s)
- Haiwei Li
- Joint International Research Laboratory of Climate and Environment Change, Jiangsu Key Laboratory of Atmospheric Environment Monitoring and Pollution Control, Collaborative Innovation Center of Atmospheric Environment and Equipment Technology, School of Environmental Science and Engineering, Nanjing University of Information Science and Technology, Nanjing, 210044, China; State Environmental Protection Key Laboratory of Formation and Prevention of Urban Air Pollution Complex, Shanghai Academy of Environment Sciences, Shanghai, 200233, China.
| | - Zihao Zhang
- Joint International Research Laboratory of Climate and Environment Change, Jiangsu Key Laboratory of Atmospheric Environment Monitoring and Pollution Control, Collaborative Innovation Center of Atmospheric Environment and Equipment Technology, School of Environmental Science and Engineering, Nanjing University of Information Science and Technology, Nanjing, 210044, China
| | - Wingkei Ho
- Department of Science and Environmental Studies, The Education University of Hong Kong, Hong Kong, China
| | - Yu Huang
- State Key Laboratory of Loess and Quaternary Geology (SKLLQG) and Key Laboratory of Aerosol Chemistry and Physics, Institute of Earth Environment, Chinese Academy of Sciences, Xi'an, 710061, China
| | - Mindong Chen
- Joint International Research Laboratory of Climate and Environment Change, Jiangsu Key Laboratory of Atmospheric Environment Monitoring and Pollution Control, Collaborative Innovation Center of Atmospheric Environment and Equipment Technology, School of Environmental Science and Engineering, Nanjing University of Information Science and Technology, Nanjing, 210044, China
| | - Xinlei Ge
- Joint International Research Laboratory of Climate and Environment Change, Jiangsu Key Laboratory of Atmospheric Environment Monitoring and Pollution Control, Collaborative Innovation Center of Atmospheric Environment and Equipment Technology, School of Environmental Science and Engineering, Nanjing University of Information Science and Technology, Nanjing, 210044, China
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7
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Jia M, Liu M, Li J, Jiang W, Xin F, Zhang W, Jiang Y, Jiang M. Formaldehyde: An Essential Intermediate for C1 Metabolism and Bioconversion. ACS Synth Biol 2024; 13:3507-3522. [PMID: 39395007 DOI: 10.1021/acssynbio.4c00454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2024]
Abstract
Formaldehyde is an intermediate metabolite of methylotrophic microorganisms that can be obtained from formate and methanol through oxidation-reduction reactions. Formaldehyde is also a one-carbon (C1) compound with high uniquely reactive activity and versatility, which is more amenable to further biocatalysis. Biosynthesis of high-value-added chemicals using formaldehyde as an intermediate is theoretically feasible and promising. This review focuses on the design of the biosynthesis of high-value-added chemicals using formaldehyde as an essential intermediate. The upstream biosynthesis and downstream bioconversion pathways of formaldehyde as an intermediate metabolite are described in detail, aiming to highlight the important role of formaldehyde in the transition from inorganic to organic carbon and carbon chain elongation. In addition, challenges and future directions of formaldehyde as an intermediate for the chemicals are discussed, with the expectation of providing ideas for the utilization of C1.
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Affiliation(s)
- Mengshi Jia
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
| | - Mengge Liu
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
| | - Jiawen Li
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
| | - Wankui Jiang
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
| | - Fengxue Xin
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
| | - Wenming Zhang
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
- Jiangsu Biochemical Chiral Engineering Technology Reseach Center, Changmao Biochemical Engineering Co., Ltd., Changzhou 213034, P. R. China
| | - Yujia Jiang
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
| | - Min Jiang
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211800, P. R. China
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8
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Zhao H. Recent advances in enzymatic carbon-carbon bond formation. RSC Adv 2024; 14:25932-25974. [PMID: 39161440 PMCID: PMC11331486 DOI: 10.1039/d4ra03885a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2024] [Accepted: 08/06/2024] [Indexed: 08/21/2024] Open
Abstract
Enzymatic carbon-carbon (C-C) bond formation reactions have become an effective and invaluable tool for designing new biological and medicinal molecules, often with asymmetric features. This review provides a systematic overview of key C-C bond formation reactions and enzymes, with the focus of reaction mechanisms and recent advances. These reactions include the aldol reaction, Henry reaction, Knoevenagel condensation, Michael addition, Friedel-Crafts alkylation and acylation, Mannich reaction, Morita-Baylis-Hillman (MBH) reaction, Diels-Alder reaction, acyloin condensations via Thiamine Diphosphate (ThDP)-dependent enzymes, oxidative and reductive C-C bond formation, C-C bond formation through C1 resource utilization, radical enzymes for C-C bond formation, and other C-C bond formation reactions.
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Affiliation(s)
- Hua Zhao
- Department of Bioproducts and Biosystems Engineering, University of Minnesota St. Paul MN 55108 USA
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9
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Desmons S, Bonin J, Robert M, Bontemps S. Four-electron reduction of CO 2: from formaldehyde and acetal synthesis to complex transformations. Chem Sci 2024:d4sc02888k. [PMID: 39246334 PMCID: PMC11376136 DOI: 10.1039/d4sc02888k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 08/02/2024] [Indexed: 09/10/2024] Open
Abstract
The expansive and dynamic field of the CO2 Reduction Reaction (CO2RR) seeks to harness CO2 as a sustainable carbon source or energy carrier. While significant progress has been made in two, six, and eight-electron reductions of CO2, the four-electron reduction remains understudied. This review fills this gap, comprehensively exploring CO2 reduction into formaldehyde (HCHO) or acetal-type compounds (EOCH2OE, with E = [Si], [B], [Zr], [U], [Y], [Nb], [Ta] or -R) using various CO2RR systems. These encompass (photo)electro-, bio-, and thermal reduction processes with diverse reductants. Formaldehyde, a versatile C1 product, is challenging to synthesize and isolate from the CO2RR. The review also discusses acetal compounds, emphasizing their significance as pathways to formaldehyde with distinct reactivity. Providing an overview of the state of four-electron CO2 reduction, this review highlights achievements, challenges, and the potential of the produced compounds - formaldehyde and acetals - as sustainable sources for valuable product synthesis, including chiral compounds.
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Affiliation(s)
- Sarah Desmons
- LCC-CNRS, Université de Toulouse, CNRS 205 route de Narbonne 31077 Toulouse Cedex 04 France
| | - Julien Bonin
- Laboratoire d'Electrochimie Moléculaire, Université Paris Cité, CNRS F-75013 Paris France
- Institut Parisien de Chimie Moléculaire, Sorbonne Université, CNRS F-75005 Paris France
| | - Marc Robert
- Laboratoire d'Electrochimie Moléculaire, Université Paris Cité, CNRS F-75013 Paris France
- Institut Parisien de Chimie Moléculaire, Sorbonne Université, CNRS F-75005 Paris France
- Institut Universitaire de France (IUF) F-75005 Paris France
| | - Sébastien Bontemps
- LCC-CNRS, Université de Toulouse, CNRS 205 route de Narbonne 31077 Toulouse Cedex 04 France
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10
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Cui Z, Ding M, Dai W, Zheng M, Wang Z, Chen T. Design of a synthetic enzyme cascade for the in vitro fixation of formaldehyde to acetoin. Enzyme Microb Technol 2024; 178:110446. [PMID: 38626535 DOI: 10.1016/j.enzmictec.2024.110446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Revised: 04/08/2024] [Accepted: 04/09/2024] [Indexed: 04/18/2024]
Abstract
Formaldehyde (FALD) has gained prominence as an essential C1 building block in the synthesis of valuable chemicals. However, there are still challenges in converting FALD into commodities. Recently, cell-free biocatalysis has emerged as a popular approach for producing such commodities. Acetoin, also known as 3-hydroxy-2-butanone, has been widely used in food, cosmetic, agricultural and the chemical industry. It is valuable to develop a process to produce acetoin from FALD. In this study, a cell-free multi-enzyme catalytic system for the production of acetoin using FALD as the substrate was designed and constructed. It included three scales: FALD utilization pathway, glycolysis pathway and acetoin synthesis pathway. After the optimization of the reaction system, 20.17 mM acetoin was produced from 122 mM FALD, with a yield of 0.165 mol/mol, reaching 99.0% of the theoretical yield. The pathway provides a new approach for high-yield acetoin production from FALD, which consolidates the foundation for the production of high value-added chemicals using cheap one-carbon compounds.
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Affiliation(s)
- Zhenzhen Cui
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China
| | - Mengnan Ding
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China
| | - Wei Dai
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China
| | - Meiyu Zheng
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China
| | - Zhiwen Wang
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China
| | - Tao Chen
- Department of Biochemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, China; Frontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China.
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11
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Nayak MK, Chakraborty S, Mohanty A, Roy S. SnCl 2-catalyzed multicomponent coupling: synthesis of 1,3-oxazolidine derivatives using paraformaldehyde as a C1 feedstock. Org Biomol Chem 2024; 22:5768-5775. [PMID: 38920417 DOI: 10.1039/d4ob00791c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
Abstract
SnCl2 catalyzed the three-component coupling of aniline, epoxide, and paraformaldehyde, resulting in the synthesis of 1,3-oxazolidine derivatives. The reaction is simple and does not require any additives, bases, or oxidants, and proceeds at moderate temperature with good functional group tolerance. The scope of the utilization of paraformaldehyde as the methylene source was further extended to the synthesis of benzothiazole and 4,4'-methylenebis(N,N-dimethylaniline) using the same catalyst. A catalytic pathway was proposed based on the control experiments.
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Affiliation(s)
- Mukesh Kumar Nayak
- Organometallics & Catalysis Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Arugul, Jatani, Khurda 752050, Odisha, India.
| | - Swati Chakraborty
- Organometallics & Catalysis Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Arugul, Jatani, Khurda 752050, Odisha, India.
| | - Anuradha Mohanty
- Organometallics & Catalysis Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Arugul, Jatani, Khurda 752050, Odisha, India.
| | - Sujit Roy
- Organometallics & Catalysis Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Arugul, Jatani, Khurda 752050, Odisha, India.
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12
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Svestka D, Bobal P, Waser M, Otevrel J. Asymmetric Organocatalyzed Transfer Hydroxymethylation of Isoindolinones Using Formaldehyde Surrogates. Org Lett 2024; 26:2505-2510. [PMID: 38502794 PMCID: PMC10985653 DOI: 10.1021/acs.orglett.4c00818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Revised: 03/12/2024] [Accepted: 03/15/2024] [Indexed: 03/21/2024]
Abstract
The piperidine-based Takemoto catalyst has been successfully employed in a novel asymmetric transfer hydroxymethylation of activated isoindolinones, allowing us to prepare the enantioenriched hydroxymethylated adducts in good to excellent yields (48-96%) and enantiopurities (81:19-97:3 e.r.). To increase the reaction rate without compromising the selectivity, carefully optimized formaldehyde surrogates were employed, providing a convenient source of anhydrous formaldehyde with a base-triggered release. The substrate scope, including 34 entries, showed the considerable generality of the asymmetric transformation, and most entries exhibited complete conversions in 24-48 h. A scale-up experiment and multiple enantioselective downstream transformations were also carried out, suggesting the prospective synthetic utility of the products.
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Affiliation(s)
- David Svestka
- Department
of Chemical Drugs, Faculty of Pharmacy, Masaryk University, Palackeho 1, 612 00 Brno, Czechia
| | - Pavel Bobal
- Department
of Chemical Drugs, Faculty of Pharmacy, Masaryk University, Palackeho 1, 612 00 Brno, Czechia
| | - Mario Waser
- Institute
of Organic Chemistry, Johannes Kepler University, Altenbergerstrasse 69, 4040 Linz, Austria
| | - Jan Otevrel
- Department
of Chemical Drugs, Faculty of Pharmacy, Masaryk University, Palackeho 1, 612 00 Brno, Czechia
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13
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Cheon H, Kim JH, Kim JS, Park JB. Valorization of single-carbon chemicals by using carboligases as key enzymes. Curr Opin Biotechnol 2024; 85:103047. [PMID: 38128199 DOI: 10.1016/j.copbio.2023.103047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 11/23/2023] [Accepted: 11/24/2023] [Indexed: 12/23/2023]
Abstract
Single-carbon (C1) biorefinery plays a key role in the consumption of global greenhouse gases and a circular carbon economy. Thereby, we have focused on the valorization of C1 compounds (e.g. methanol, formaldehyde, and formate) into multicarbon products, including bioplastic monomers, glycolate, and ethylene glycol. For instance, methanol, derived from the oxidation of CH4, can be converted into glycolate, ethylene glycol, or erythrulose via formaldehyde and glycolaldehyde, employing C1 and/or C2 carboligases as essential enzymes. Escherichia coli was engineered to convert formate, produced from CO via CO2 or from CO2 directly, into glycolate. Recent progress in the design of biotransformation pathways, enzyme discovery, and engineering, as well as whole-cell biocatalyst engineering for C1 biorefinery, was addressed in this review.
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Affiliation(s)
- Huijin Cheon
- Department of Food Science and Biotechnology, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Jun-Hong Kim
- Department of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Jeong-Sun Kim
- Department of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea.
| | - Jin-Byung Park
- Department of Food Science and Biotechnology, Ewha Womans University, Seoul 03760, Republic of Korea.
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14
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Jeong YJ, Seo MJ, Sung BH, Kim JS, Yeom SJ. Biotransformation of 2-keto-4-hydroxybutyrate via aldol condensation using an efficient and thermostable carboligase from Deinococcus radiodurans. BIORESOUR BIOPROCESS 2024; 11:9. [PMID: 38647973 PMCID: PMC10992282 DOI: 10.1186/s40643-024-00727-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 01/03/2024] [Indexed: 04/25/2024] Open
Abstract
The bioconversion of 4-hydroxy-2-keto acid derivatives via aldol condensation of formaldehyde and pyruvate has received substantial attention as potential source of chemicals for production of amino acids, hydroxy carboxylic acids, and chiral aldehydes. We developed an environmentally friendly biocatalyst consisting of a novel thermostable class II pyruvate aldolase from Deinococcus radiodurans with maltose-binding protein (MBP-DrADL), which has specific activity of 46.3 µmol min-1 mg-1. Surprisingly, MBP-DrADL maintained over 60% of enzyme activity for 4 days at 50 to 65 °C, we used MBP-DrADL as the best candidate enzyme to produce 2-keto-4-hydroxybutyrate (2-KHB) from formaldehyde and pyruvate via aldol condensation. The optimum reaction conditions for 2-KHB production were 50 °C, pH 8.0, 5 mM Mg2+, 100 mM formaldehyde, and 200 mM pyruvate. Under these optimized conditions, MBP-DrADL produced 76.5 mM (8.94 g L-1) 2-KHB over 60 min with a volumetric productivity of 8.94 g L-1 h-1 and a specific productivity of 357.6 mg mg-enzyme-1 h-1. Furthermore, 2-KHB production was improved by continuous addition of substrates, which produced approximately 124.8 mM (14.6 g L-1) of 2-KHB over 60 min with a volumetric productivity and specific productivity of 14.6 g L-1 h-1 and 583.4 mg mg-enzyme-1 h-1, respectively. MBP-DrADL showed the highest specific productivity for 2-KHB production yet reported. Our study provides a highly efficient biocatalyst for the synthesis of 2-KHB and lays the foundation for large-scale production and application of high-value compounds from formaldehyde.
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Affiliation(s)
- Yeon-Ju Jeong
- School of Biological Sciences and Biotechnology, Graduate School, Chonnam National University, Gwangju, Republic of Korea
| | - Min-Ju Seo
- School of Biological Sciences and Technology, Chonnam National University, Gwangju, Republic of Korea
- Institute of Synthetic Biology for Carbon Neutralization, Chonnam National University, Gwangju, 61186, Republic of Korea
| | - Bong Hyun Sung
- Synthetic Biology Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
| | - Jeong-Sun Kim
- Department of Chemistry, Chonnam National University, Gwangju, 61186, Republic of Korea.
| | - Soo-Jin Yeom
- School of Biological Sciences and Biotechnology, Graduate School, Chonnam National University, Gwangju, Republic of Korea.
- School of Biological Sciences and Technology, Chonnam National University, Gwangju, Republic of Korea.
- Institute of Synthetic Biology for Carbon Neutralization, Chonnam National University, Gwangju, 61186, Republic of Korea.
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15
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Ma X, Sun C, Xian M, Guo J, Zhang R. Progress in research on the biosynthesis of 1,2,4-butanetriol by engineered microbes. World J Microbiol Biotechnol 2024; 40:68. [PMID: 38200399 DOI: 10.1007/s11274-024-03885-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 01/05/2024] [Indexed: 01/12/2024]
Abstract
1,2,4-butanetriol (BT) is a polyol with unique chemical properties, which has a stereocenter and can be divided into D-BT (the S-enantiomer) and L-BT (the R-enantiomer). BT can be used for the synthesis of 1,2,4-butanetriol trinitrate, 3-hydroxytetrahydrofuran, polyurethane, and other chemicals. It is widely used in the military industry, medicine, tobacco, polymer. At present, the BT is mainly synthesized by chemical methods, which are accompanied by harsh reaction conditions, poor selectivity, many by-products, and environmental pollution. Therefore, BT biosynthesis methods with the advantages of mild reaction conditions and green sustainability have become a current research hotspot. In this paper, the research status of microbial synthesis of BT was summarized from the following three aspects: (1) the biosynthetic pathway establishment for BT from xylose; (2) metabolic engineering strategies employed for improving BT production from xylose; (3) other substrates for BT production. Finally, the challenges and prospects of biosynthetic BT were discussed for future methods to improve competitiveness for industrial production.
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Affiliation(s)
- Xiangyu Ma
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Chao Sun
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China
- Shandong Energy Institute, Qingdao, 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao, 266101, China
| | - Mo Xian
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China
- Shandong Energy Institute, Qingdao, 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao, 266101, China
| | - Jing Guo
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China.
- Shandong Energy Institute, Qingdao, 266101, China.
- Qingdao New Energy Shandong Laboratory, Qingdao, 266101, China.
| | - Rubing Zhang
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China.
- Shandong Energy Institute, Qingdao, 266101, China.
- Qingdao New Energy Shandong Laboratory, Qingdao, 266101, China.
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16
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Bin Yeo J, Ho Jang J, In Jo Y, Woo Koo J, Tae Nam K. Paired Electrosynthesis of Formaldehyde Derivatives from CO 2 Reduction and Methanol Oxidation. Angew Chem Int Ed Engl 2024; 63:e202316020. [PMID: 38018795 DOI: 10.1002/anie.202316020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 11/17/2023] [Accepted: 11/28/2023] [Indexed: 11/30/2023]
Abstract
Utilizing CO2 -derived formaldehyde derivatives for fuel additive or polymer synthesis is a promising approach to reduce net carbon dioxide emissions. Existing methodologies involve converting CO2 to methanol by thermal hydrogenation, followed by electrochemical or thermochemical oxidation to produce formaldehyde. Adding to the conventional methanol oxidation pathway, we propose a new electrochemical approach to simultaneously generate formaldehyde derivatives at both electrodes by partial methanol oxidation and the direct reduction of CO2 . To achieve this, a method to directly reduce CO2 to formaldehyde at the cathode is required. Still, it has been scarcely reported previously due to the acidity of the formic acid intermediate and the facile over-reduction of formaldehyde to methanol. By enabling the activation and subsequent stabilization of formic acid and formaldehyde respectively in methanol solvent, we were able to implement a strategy where formaldehyde derivatives were generated at the cathode alongside the anode. Further mechanism studies revealed that protons supplied from the anodic reaction contribute to the activation of formic acid and the stabilization of the formaldehyde product. Additionally, it was found that the cathodic formaldehyde derivative Faradaic efficiency can be further increased through prolonged electrolysis time up to 50 % along with a maximum anodic formaldehyde derivative Faradaic efficiency of 90 %.
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Affiliation(s)
- Jia Bin Yeo
- Department of Materials Science and Engineering, Seoul National University, Seoul, 151-744, Korea
| | - Jun Ho Jang
- Department of Materials Science and Engineering, Seoul National University, Seoul, 151-744, Korea
| | - Young In Jo
- Department of Materials Science and Engineering, Seoul National University, Seoul, 151-744, Korea
| | - Jeong Woo Koo
- Department of Materials Science and Engineering, Seoul National University, Seoul, 151-744, Korea
| | - Ki Tae Nam
- Department of Materials Science and Engineering, Seoul National University, Seoul, 151-744, Korea
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17
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Kim JH, Cheon H, Jo HJ, Kim JW, Kim GY, Seo HR, Seo PW, Kim JS, Park JB. Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose. Int J Biol Macromol 2023; 253:127674. [PMID: 37890751 DOI: 10.1016/j.ijbiomac.2023.127674] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 10/17/2023] [Accepted: 10/24/2023] [Indexed: 10/29/2023]
Abstract
A number of carboligases, which catalyze condensation of C1- and/or C2-aldehydes into multi-carbon products, have been reported. However, their catalytic activities and/or regioselectivities remained rather low. Thereby, this study has focused on engineering of C1 and C2 carboligases for the regioselective condensation of C1-formaldehyde into C4-erythrulose via C2-glycolaldehyde. The crystal structure of the glyoxylate carboligase from Escherichia coli (EcGCL) was elucidated in complex with glycolaldehyde. A structure-guided rationale generated several mutants, one of whose catalytic activity reached 15.6 M-1·s-1, almost 10 times greater than the wild-type enzyme. Another variant (i.e., EcGCL_R484M/N283Q/L478M/M488L/R284K) has shown significantly increased stability to the glycolaldehyde toxicity, enabling production of glycolaldehyde to 31 mM from 75 mM formaldehyde (conversion: 83 %). Besides, the E1 subunit of α-ketoglutarate dehydrogenase complex from Vibrio vulnificus (VvSucA) was engineered as a regiospecific C2 carboligase for condensation of glycolaldehyde into erythrulose. The combination of EcGCL_R484M/N283Q/L478M/M488L/R284K and VvSucA_K228L led to the cascade production of erythrulose to 8 mM from 90 mM formaldehyde via glycolaldehyde without byproduct formation. This study will contribute to valorization of C1 gases into industrially relevant multi-carbon products in an environment-friendly way.
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Affiliation(s)
- Jun-Hong Kim
- Department of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Huijin Cheon
- Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Hye-Jin Jo
- Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Ji-Won Kim
- Department of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Ga Young Kim
- Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Hye-Rim Seo
- Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Pil-Won Seo
- Department of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Jeong-Sun Kim
- Department of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea.
| | - Jin-Byung Park
- Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea.
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18
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Jeong YJ, Seo PW, Seo MJ, Ju SB, Kim JS, Yeom SJ. One-Pot Biosynthesis of 2-Keto-4-hydroxybutyrate from Cheap C1 Compounds Using Rationally Designed Pyruvate Aldolase and Methanol Dehydrogenase. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:4328-4336. [PMID: 36856566 PMCID: PMC10022506 DOI: 10.1021/acs.jafc.2c09108] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 02/20/2023] [Accepted: 02/22/2023] [Indexed: 06/18/2023]
Abstract
One-carbon chemicals (C 1s) are potential building blocks as they are cheap, sustainable, and abiotic components. Methanol-derived formaldehyde can be another versatile building block for the production of 2-keto-4-hydroxyacid derivatives that can be used for amino acids, hydroxy carboxylic acids, and chiral aldehydes. To produce 2-keto-4-hydroxybutyrate from C 1s in an environment-friendly way, we characterized an aldolase from Pseudomonas aeruginosa PAO1 (PaADL), which showed much higher catalytic activity in condensing formaldehyde and pyruvate than the reported aldolases. By applying a structure-based rational approach, we found a variant (PaADLV121A/L241A) that exhibited better catalytic activities than the wild-type enzyme. Next, we constructed a one-pot cascade biocatalyst system by combining PaADL and a methanol dehydrogenase (MDH) and, for the first time, effectively produced 2-keto-4-hydroxybutyrate as the main product from pyruvate and methanol via an enzymatic reaction. This simple process applied here will help design a green process for the production of 2-keto-4-hydroxyacid derivatives.
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Affiliation(s)
- Yeon-Ju Jeong
- School
of Biological Sciences and Biotechnology, Graduate School, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Pil-Won Seo
- Department
of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Min-Ju Seo
- School
of Biological Sciences and Technology, Chonnam
National University, Gwangju 61186, Republic
of Korea
| | - Su-Bin Ju
- School
of Biological Sciences and Biotechnology, Graduate School, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Jeong-Sun Kim
- Department
of Chemistry, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Soo-Jin Yeom
- School
of Biological Sciences and Biotechnology, Graduate School, Chonnam National University, Gwangju 61186, Republic of Korea
- School
of Biological Sciences and Technology, Chonnam
National University, Gwangju 61186, Republic
of Korea
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19
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Guzmán J, Urriolabeitia A, Padilla M, García-Orduña P, Polo V, Fernández-Alvarez FJ. Mechanism Insights into the Iridium(III)- and B(C 6F 5) 3-Catalyzed Reduction of CO 2 to the Formaldehyde Level with Tertiary Silanes. Inorg Chem 2022; 61:20216-20221. [PMID: 36472385 PMCID: PMC10468102 DOI: 10.1021/acs.inorgchem.2c03330] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Indexed: 12/12/2022]
Abstract
The catalytic system [Ir(CF3CO2)(κ2-NSiMe)2] [1; NSiMe = (4-methylpyridin-2-yloxy)dimethylsilyl]/B(C6F5)3 promotes the selective reduction of CO2 with tertiary silanes to the corresponding bis(silyl)acetal. Stoichiometric and catalytic studies evidenced that species [Ir(CF3COO-B(C6F5)3)(κ2-NSiMe)2] (3), [Ir(κ2-NSiMe)2][HB(C6F5)3] (4), and [Ir(HCOO-B(C6F5)3)(κ2-NSiMe)2] (5) are intermediates of the catalytic process. The structure of 3 has been determined by X-ray diffraction methods. Theoretical calculations show that the rate-limiting step for the 1/B(C6F5)3-catalyzed hydrosilylation of CO2 to bis(silyl)acetal is a boron-promoted Si-H bond cleavage via an iridium silylacetal borane adduct.
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Affiliation(s)
- Jefferson Guzmán
- Facultad
de Ciencias, Departamento de Química Inorgánica, Instituto
de Síntesis Química y Catálisis Homogénea, Universidad de Zaragoza, CSIC, Zaragoza 50009, Spain
| | - Asier Urriolabeitia
- Facultad
de Ciencias, Departamento de Química Física, BIFI, Universidad de Zaragoza, Zaragoza 50009, Spain
| | - Marina Padilla
- Facultad
de Ciencias, Departamento de Química Inorgánica, Instituto
de Síntesis Química y Catálisis Homogénea, Universidad de Zaragoza, CSIC, Zaragoza 50009, Spain
| | - Pilar García-Orduña
- Facultad
de Ciencias, Departamento de Química Inorgánica, Instituto
de Síntesis Química y Catálisis Homogénea, Universidad de Zaragoza, CSIC, Zaragoza 50009, Spain
| | - Víctor Polo
- Facultad
de Ciencias, Departamento de Química Física, BIFI, Universidad de Zaragoza, Zaragoza 50009, Spain
| | - Francisco J. Fernández-Alvarez
- Facultad
de Ciencias, Departamento de Química Inorgánica, Instituto
de Síntesis Química y Catálisis Homogénea, Universidad de Zaragoza, CSIC, Zaragoza 50009, Spain
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20
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Zhao S, Liang H, Hu X, Li S, Daasbjerg K. Challenges and Prospects in the Catalytic Conversion of Carbon Dioxide to Formaldehyde. Angew Chem Int Ed Engl 2022; 61:e202204008. [PMID: 36066469 PMCID: PMC9827866 DOI: 10.1002/anie.202204008] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Indexed: 01/12/2023]
Abstract
Formaldehyde (HCHO) is a crucial C1 building block for daily-life commodities in a wide range of industrial processes. Industrial production of HCHO today is based on energy- and cost-intensive gas-phase catalytic oxidation of methanol, which calls for exploring other and more sustainable ways of carrying out this process. Utilization of carbon dioxide (CO2 ) as precursor presents a promising strategy to simultaneously mitigate the carbon footprint and alleviate environmental issues. This Minireview summarizes recent progress in CO2 -to-HCHO conversion using hydrogenation, hydroboration/hydrosilylation as well as photochemical, electrochemical, photoelectrochemical, and enzymatic approaches. The active species, reaction intermediates, and mechanistic pathways are discussed to deepen the understanding of HCHO selectivity issues. Finally, shortcomings and prospects of the various strategies for sustainable reduction of CO2 to HCHO are discussed.
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Affiliation(s)
- Siqi Zhao
- Novo Nordisk Foundation (NNF) CO2 Research CenterDepartment of Chemistry/Interdisciplinary Nanoscience Center (iNANO)Aarhus UniversityLangelandsgade 1408000Aarhus CDenmark
| | - Hong‐Qing Liang
- Leibniz-Institut für KatalyseAlbert-Einstein-Strasse 29a18059RostockGermany
| | - Xin‐Ming Hu
- Environment Research InstituteShandong UniversityBinhai Road 72Qingdao266237China
| | - Simin Li
- School of Metallurgy and EnvironmentCentral South UniversityChangsha410083P.R. China
| | - Kim Daasbjerg
- Novo Nordisk Foundation (NNF) CO2 Research CenterDepartment of Chemistry/Interdisciplinary Nanoscience Center (iNANO)Aarhus UniversityLangelandsgade 1408000Aarhus CDenmark
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21
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Feng J, Xu S, Du H, Gong Q, Xie S, Deng W, Zhang Q, Wang Y. Advances in the solar-energy driven conversion of methanol to value-added chemicals. MOLECULAR CATALYSIS 2022. [DOI: 10.1016/j.mcat.2022.112593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
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22
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Massad N, Banta S. Development of a Kinetic Model and Figures of Merit for Formaldehyde Carboligations Catalyzed by Formolase Enzymes. Biotechnol Bioeng 2022; 119:3140-3148. [DOI: 10.1002/bit.28217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Revised: 08/18/2022] [Accepted: 08/21/2022] [Indexed: 11/05/2022]
Affiliation(s)
- Nadim Massad
- Department of Chemical EngineeringColumbia UniversityNew YorkNYUSA
| | - Scott Banta
- Department of Chemical EngineeringColumbia UniversityNew YorkNYUSA
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23
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Müller M, Germer P, Andexer JN. Biocatalytic One-Carbon Transfer – A Review. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/s-0040-1719884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
Abstract
AbstractThis review provides an overview of different C1 building blocks as substrates of enzymes, or part of their cofactors, and the resulting functionalized products. There is an emphasis on the broad range of possibilities of biocatalytic one-carbon extensions with C1 sources of different oxidation states. The identification of uncommon biosynthetic strategies, many of which might serve as templates for synthetic or biotechnological applications, towards one-carbon extensions is supported by recent genomic and metabolomic progress and hence we refer principally to literature spanning from 2014 to 2020.1 Introduction2 Methane, Methanol, and Methylamine3 Glycine4 Nitromethane5 SAM and SAM Ylide6 Other C1 Building Blocks7 Formaldehyde and Glyoxylate as Formaldehyde Equivalents8 Cyanide9 Formic Acid10 Formyl-CoA and Oxalyl-CoA11 Carbon Monoxide12 Carbon Dioxide13 Conclusions
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24
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Brott S, Thomas F, Behrens M, Methling K, Bartosik D, Dutschei T, Lalk M, Michel G, Schweder T, Bornscheuer U. Connecting algal polysaccharide degradation to formaldehyde detoxification. Chembiochem 2022; 23:e202200269. [PMID: 35561127 PMCID: PMC9400963 DOI: 10.1002/cbic.202200269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Indexed: 11/22/2022]
Abstract
Formaldehyde is a toxic metabolite that is formed in large quantities during bacterial utilization of the methoxy sugar 6‐O‐methyl‐d‐galactose, an abundant monosaccharide in the red algal polysaccharide porphyran. Marine bacteria capable of metabolizing porphyran must therefore possess suitable detoxification systems for formaldehyde. We demonstrate here that detoxification of formaldehyde in the marine Flavobacterium Zobellia galactanivorans proceeds via the ribulose monophosphate pathway. Simultaneously, we show that the genes encoding the key enzymes of this pathway are important for maintaining high formaldehyde resistance. Additionally, these genes are upregulated in the presence of porphyran, allowing us to connect porphyran degradation to the detoxification of formed formaldehyde.
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Affiliation(s)
- Stefan Brott
- Universität Greifswald: Universitat Greifswald, Institute of Biochemistry, GERMANY
| | | | - Maike Behrens
- University of Greifswald: Universitat Greifswald, Institute of Biochemistry, GERMANY
| | - Karen Methling
- Universität Greifswald: Universitat Greifswald, Institute of Biochemistry, GERMANY
| | - Daniel Bartosik
- Universität Greifswald: Universitat Greifswald, Institute of Pharmacy, GERMANY
| | - Theresa Dutschei
- Universität Greifswald: Universitat Greifswald, Institute of Biochemistry, GERMANY
| | - Michael Lalk
- Universität Greifswald: Universitat Greifswald, Institute of Biochemistry, GERMANY
| | - Gurvan Michel
- Sorbonne Universite, Station Biologique de Roscoff, FRANCE
| | - Thomas Schweder
- Universität Greifswald: Universitat Greifswald, Institute of Pharmacy, GERMANY
| | - Uwe Bornscheuer
- Greifswald University, Dept. of Biotechnology & Enzyme Catalysis, Felix-Hausdorff-Str. 4, 17487, Greifswald, GERMANY
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25
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Kanemitsu T, Ozasa E, Murase Y, Sakaue S, Miyazaki M, Nagata K, Itoh T. Asymmetric Construction of All‐Carbon Quaternary Stereocenters via Organocatalytic α‐Hydroxymethylation of Malonic Diesters Using Aqueous Formaldehyde. ASIAN J ORG CHEM 2022. [DOI: 10.1002/ajoc.202200101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Takuya Kanemitsu
- School of Pharmacy Showa University 1-5-8 Hatanodai, Shinagawa-ku Tokyo 142-8555 Japan
| | - Eisuke Ozasa
- School of Pharmacy Showa University 1-5-8 Hatanodai, Shinagawa-ku Tokyo 142-8555 Japan
| | - Yuria Murase
- School of Pharmacy Showa University 1-5-8 Hatanodai, Shinagawa-ku Tokyo 142-8555 Japan
| | - Susumu Sakaue
- School of Pharmacy Showa University 1-5-8 Hatanodai, Shinagawa-ku Tokyo 142-8555 Japan
| | - Michiko Miyazaki
- School of Pharmacy Showa University 1-5-8 Hatanodai, Shinagawa-ku Tokyo 142-8555 Japan
| | - Kazuhiro Nagata
- School of Pharmacy Showa University 1-5-8 Hatanodai, Shinagawa-ku Tokyo 142-8555 Japan
| | - Takashi Itoh
- School of Pharmacy Showa University 1-5-8 Hatanodai, Shinagawa-ku Tokyo 142-8555 Japan
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26
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Li Y, Hu N, Xu Z, Cui Y, Feng J, Yao P, Wu Q, Zhu D, Ma Y. Asymmetric Synthesis of N-Substituted 1,2-Amino Alcohols from Simple Aldehydes and Amines by One-Pot Sequential Enzymatic Hydroxymethylation and Asymmetric Reductive Amination. Angew Chem Int Ed Engl 2022; 61:e202116344. [PMID: 35166000 DOI: 10.1002/anie.202116344] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Indexed: 01/10/2023]
Abstract
The chiral N-substituted 1,2-amino alcohol motif is found in many natural and synthetic bioactive compounds. In this study, enzymatic asymmetric reductive amination of α-hydroxymethyl ketones with enantiocomplementary imine reductases (IREDs) enabled the synthesis of chiral N-substituted 1,2-amino alcohols with excellent ee values (91-99 %) in moderate to high yields (41-84 %). Furthermore, a one-pot, two-step enzymatic process involving benzaldehyde lyase-catalyzed hydroxymethylation of aldehydes and subsequent asymmetric reductive amination was developed, offering an environmentally friendly and economical way to produce N-substituted 1,2-amino alcohols from readily available simple aldehydes and amines. This methodology was then applied to rapidly access a key synthetic intermediate of anti-malaria and cytotoxic tetrahydroquinoline alkaloids.
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Affiliation(s)
- Yu Li
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China.,University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, China
| | - Na Hu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China.,University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, China
| | - Zefei Xu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China
| | - Yunfeng Cui
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China
| | - Jinhui Feng
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China.,University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, China
| | - Peiyuan Yao
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China.,University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, China
| | - Qiaqing Wu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China.,University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, China
| | - Dunming Zhu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China.,University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, China
| | - Yanhe Ma
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, National Technology Innovation Center for Synthetic Biology, Tianjin, 300308, China
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27
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Li Y, Hu N, Xu Z, Cui Y, Feng J, Yao P, Wu Q, Zhu D, Ma Y. Asymmetric Synthesis of
N
‐Substituted 1,2‐Amino Alcohols from Simple Aldehydes and Amines by One‐Pot Sequential Enzymatic Hydroxymethylation and Asymmetric Reductive Amination. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202116344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Yu Li
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
- University of Chinese Academy of Sciences 19A Yuquan Road Beijing 100049 China
| | - Na Hu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
- University of Chinese Academy of Sciences 19A Yuquan Road Beijing 100049 China
| | - Zefei Xu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
| | - Yunfeng Cui
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
| | - Jinhui Feng
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
- University of Chinese Academy of Sciences 19A Yuquan Road Beijing 100049 China
| | - Peiyuan Yao
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
- University of Chinese Academy of Sciences 19A Yuquan Road Beijing 100049 China
| | - Qiaqing Wu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
- University of Chinese Academy of Sciences 19A Yuquan Road Beijing 100049 China
| | - Dunming Zhu
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
- University of Chinese Academy of Sciences 19A Yuquan Road Beijing 100049 China
| | - Yanhe Ma
- National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Research Center of Biocatalytic Technology Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences National Technology Innovation Center for Synthetic Biology Tianjin 300308 China
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28
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Song A, Liu S, Wang M, Lu Y, Wang R, Xing LB. Iridium-catalyzed synthesis of β-methylated secondary alcohols using methanol. J Catal 2022. [DOI: 10.1016/j.jcat.2022.01.021] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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29
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Hélaine V, Gastaldi C, Lemaire M, Clapés P, Guérard-Hélaine C. Recent Advances in the Substrate Selectivity of Aldolases. ACS Catal 2021. [DOI: 10.1021/acscatal.1c04273] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Virgil Hélaine
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000 Clermont-Ferrand, France
| | - Cédric Gastaldi
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000 Clermont-Ferrand, France
| | - Marielle Lemaire
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000 Clermont-Ferrand, France
| | - Pere Clapés
- Biological Chemistry Department, Institute for Advanced Chemistry of Catalonia, IQAC−CSIC, 08034 Barcelona, Spain
| | - Christine Guérard-Hélaine
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000 Clermont-Ferrand, France
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30
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Abstract
Biocatalysis has an enormous impact on chemical synthesis. The waves in which biocatalysis has developed, and in doing so changed our perception of what organic chemistry is, were reviewed 20 and 10 years ago. Here we review the consequences of these waves of development. Nowadays, hydrolases are widely used on an industrial scale for the benign synthesis of commodity and bulk chemicals and are fully developed. In addition, further enzyme classes are gaining ever increasing interest. Particularly, enzymes catalysing selective C-C-bond formation reactions and enzymes catalysing selective oxidation and reduction reactions are solving long-standing synthetic challenges in organic chemistry. Combined efforts from molecular biology, systems biology, organic chemistry and chemical engineering will establish a whole new toolbox for chemistry. Recent developments are critically reviewed.
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Affiliation(s)
- Ulf Hanefeld
- Biocatalysis, Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, The Netherlands.
| | - Frank Hollmann
- Biocatalysis, Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, The Netherlands.
| | - Caroline E Paul
- Biocatalysis, Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, The Netherlands.
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31
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He Y, Li J, Sheng J, Chen S, Dong F, Sun Y. Crystal-structure dependent reaction pathways in photocatalytic formaldehyde mineralization on BiPO 4. JOURNAL OF HAZARDOUS MATERIALS 2021; 420:126633. [PMID: 34280717 DOI: 10.1016/j.jhazmat.2021.126633] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 06/29/2021] [Accepted: 07/10/2021] [Indexed: 06/13/2023]
Abstract
Formaldehyde as significant environmental hazard in air seriously harm the environment and human health. Although photocatalysis has demonstrated the possibility for HCHO degradation, it has long been limited by unsatisfied degradation efficiency and the unclear reaction mechanism. Here, we confirm that surface atomic arrangement of BiPO4 plays a critical role in photooxidation of HCHO via modulating the reaction pathway, offering 2.63 times enhancement of HCHO degradation efficiency. We dissect the processes in the photocatalytic reaction by DFT calculation, ROS monitoring, and in situ diffuse reflectance infrared Fourier transform spectra (DRIFTS) investigation. Specifically, we reveal that the controlling surface atomic arrangement could modulate adsorption model from single-point to bridging, and promote activation of small molecules. Concurrently, the active surface dependent on crystal structure facilitates the efficient transformation of intermediates (HCOOH*) (reducing energy barrier from 0.41 to -0.35 eV), producing final-product (H2CO3, ∆G = -0.35 eV) while suppressing toxic by-product (CO, ∆G = 0.32 eV), which contributes to the sustained deep mineralization of HCHO with enhancement by 61.4%. The findings are crucial as they provide crystal-structure related insights into the design of efficient catalysts for photocatalytic HCHO degradation. Ultimately, current molecular understanding should unlock the solar-driven catalytic pathways for other oxidation reactions.
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Affiliation(s)
- Ye He
- School of Resources and Environment, University of Electronic Science and Technology of China, Chengdu 611731, China; Yangtze Delta Region Institute (Huzhou), University of Electronic Science and Technology of China, Huzhou 313001, China
| | - Jiarui Li
- Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Huzhou 313001, China; Chongqing Key Laboratory of Catalysis and New Environmental Materials, College of Environment and Resources, Chongqing Technology and Business University, Chongqing 400067, China
| | - Jianping Sheng
- School of Resources and Environment, University of Electronic Science and Technology of China, Chengdu 611731, China; Yangtze Delta Region Institute (Huzhou), University of Electronic Science and Technology of China, Huzhou 313001, China
| | - Si Chen
- Yangtze Delta Region Institute (Huzhou), University of Electronic Science and Technology of China, Huzhou 313001, China
| | - Fan Dong
- Yangtze Delta Region Institute (Huzhou), University of Electronic Science and Technology of China, Huzhou 313001, China; Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Huzhou 313001, China
| | - Yanjuan Sun
- School of Resources and Environment, University of Electronic Science and Technology of China, Chengdu 611731, China; Yangtze Delta Region Institute (Huzhou), University of Electronic Science and Technology of China, Huzhou 313001, China.
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32
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Desmons S, Grayson-Steel K, Nuñez-Dallos N, Vendier L, Hurtado J, Clapés P, Fauré R, Dumon C, Bontemps S. Enantioselective Reductive Oligomerization of Carbon Dioxide into l-Erythrulose via a Chemoenzymatic Catalysis. J Am Chem Soc 2021; 143:16274-16283. [PMID: 34546049 DOI: 10.1021/jacs.1c07872] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
A cell-free enantioselective transformation of the carbon atom of CO2 has never been reported. In the urgent context of transforming CO2 into products of high value, the enantiocontrolled synthesis of chiral compounds from CO2 would be highly desirable. Using an original hybrid chemoenzymatic catalytic process, we report herein the reductive oligomerization of CO2 into C3 (dihydroxyacetone, DHA) and C4 (l-erythrulose) carbohydrates, with perfect enantioselectivity of the latter chiral product. This was achieved with the key intermediacy of formaldehyde. CO2 is first reduced selectively by 4e- by an iron-catalyzed hydroboration reaction, leading to the isolation and complete characterization of a new bis(boryl)acetal compound derived from dimesitylborane. In an aqueous buffer solution at 30 °C, this compound readily releases formaldehyde, which is then involved in selective enzymatic transformations, giving rise either (i) to DHA using a formolase (FLS) catalysis or (ii) to l-erythrulose with a cascade reaction combining FLS and d-fructose-6-phosphate aldolase (FSA) A129S variant. Finally, the nature of the synthesized products is noteworthy, since carbohydrates are of high interest for the chemical and pharmaceutical industries. The present results prove that the cell-free de novo synthesis of carbohydrates from CO2 as a sustainable carbon source is a possible alternative pathway in addition to the intensely studied biomass extraction and de novo syntheses from fossil resources.
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Affiliation(s)
- Sarah Desmons
- LCC-CNRS, Université de Toulouse, CNRS, F-31077 Toulouse Cedex 4, France.,TBI, Université de Toulouse, CNRS, INRAE, INSA, 31077 Toulouse, France
| | | | - Nelson Nuñez-Dallos
- LCC-CNRS, Université de Toulouse, CNRS, F-31077 Toulouse Cedex 4, France.,Department of Chemistry, Universidad de los Andes, Carrera 1 No. 18A-12, 111711 Bogotá, Colombia
| | - Laure Vendier
- LCC-CNRS, Université de Toulouse, CNRS, F-31077 Toulouse Cedex 4, France
| | - John Hurtado
- Department of Chemistry, Universidad de los Andes, Carrera 1 No. 18A-12, 111711 Bogotá, Colombia
| | - Pere Clapés
- Biological Chemistry Department, Institute for Advanced Chemistry of Catalonia, IQAC-CSIC, Jordi Girona 18-26, 08034 Barcelona, Spain
| | - Régis Fauré
- TBI, Université de Toulouse, CNRS, INRAE, INSA, 31077 Toulouse, France
| | - Claire Dumon
- TBI, Université de Toulouse, CNRS, INRAE, INSA, 31077 Toulouse, France
| | - Sébastien Bontemps
- LCC-CNRS, Université de Toulouse, CNRS, F-31077 Toulouse Cedex 4, France
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33
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Zhang D, Jarava-Barrera C, Bontemps S. Selective Reductive Dimerization of CO2 into Glycolaldehyde. ACS Catal 2021. [DOI: 10.1021/acscatal.1c00412] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Dan Zhang
- LCC-CNRS, Université de Toulouse, CNRS, 205 Route de Narbonne, Toulouse 31077, Cedex 04, France
| | - Carlos Jarava-Barrera
- LCC-CNRS, Université de Toulouse, CNRS, 205 Route de Narbonne, Toulouse 31077, Cedex 04, France
| | - Sébastien Bontemps
- LCC-CNRS, Université de Toulouse, CNRS, 205 Route de Narbonne, Toulouse 31077, Cedex 04, France
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34
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Yang Q, Guo X, Liu Y, Jiang H. Biocatalytic C-C Bond Formation for One Carbon Resource Utilization. Int J Mol Sci 2021; 22:ijms22041890. [PMID: 33672882 PMCID: PMC7918591 DOI: 10.3390/ijms22041890] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 01/31/2021] [Accepted: 02/05/2021] [Indexed: 12/22/2022] Open
Abstract
The carbon-carbon bond formation has always been one of the most important reactions in C1 resource utilization. Compared to traditional organic synthesis methods, biocatalytic C-C bond formation offers a green and potent alternative for C1 transformation. In recent years, with the development of synthetic biology, more and more carboxylases and C-C ligases have been mined and designed for the C1 transformation in vitro and C1 assimilation in vivo. This article presents an overview of C-C bond formation in biocatalytic C1 resource utilization is first provided. Sets of newly mined and designed carboxylases and ligases capable of catalyzing C-C bond formation for the transformation of CO2, formaldehyde, CO, and formate are then reviewed, and their catalytic mechanisms are discussed. Finally, the current advances and the future perspectives for the development of catalysts for C1 resource utilization are provided.
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Affiliation(s)
- Qiaoyu Yang
- Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin 300308, China; (Q.Y.); (X.G.)
- National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiaoxian Guo
- Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin 300308, China; (Q.Y.); (X.G.)
- National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China
| | - Yuwan Liu
- Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin 300308, China; (Q.Y.); (X.G.)
- National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China
- Correspondence: (Y.L.); (H.J.)
| | - Huifeng Jiang
- Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin 300308, China; (Q.Y.); (X.G.)
- National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China
- Correspondence: (Y.L.); (H.J.)
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35
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Huang X, Wang H, Cao Q, Li Y, Zhang J. Access to 3,3-disubstituted oxindoles via microwave-assisted Cannizzaro and aldol reactions of formaldehyde with isatins and their imines. RSC Adv 2021; 11:17320-17323. [PMID: 35479673 PMCID: PMC9033177 DOI: 10.1039/d1ra02150h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Accepted: 04/21/2021] [Indexed: 01/30/2023] Open
Abstract
The reaction proceeds with the assistance of microwave heating in a mild base. Formaldehyde behaves as both a reductant (via a Cannizzaro process with isatin) and an electrophile.
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Affiliation(s)
- Xuan Huang
- International Joint Research Centre for Molecular Science
- College of Chemistry and Environmental Engineering
- Shenzhen University
- Shenzhen
- P. R. China
| | - Hongling Wang
- International Joint Research Centre for Molecular Science
- College of Chemistry and Environmental Engineering
- Shenzhen University
- Shenzhen
- P. R. China
| | - Qingxiang Cao
- International Joint Research Centre for Molecular Science
- College of Chemistry and Environmental Engineering
- Shenzhen University
- Shenzhen
- P. R. China
| | - Yong Li
- International Joint Research Centre for Molecular Science
- College of Chemistry and Environmental Engineering
- Shenzhen University
- Shenzhen
- P. R. China
| | - Junmin Zhang
- International Joint Research Centre for Molecular Science
- College of Chemistry and Environmental Engineering
- Shenzhen University
- Shenzhen
- P. R. China
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36
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Wang Y, Zhang C, Zhao YL, Zhao R, Houk KN. Understand the Specific Regio- and Enantioselectivity of Fluostatin Conjugation in the Post-Biosynthesis. Biomolecules 2020; 10:E815. [PMID: 32466453 PMCID: PMC7355926 DOI: 10.3390/biom10060815] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Revised: 05/07/2020] [Accepted: 05/08/2020] [Indexed: 12/22/2022] Open
Abstract
Fluostatins, benzofluorene-containing aromatic polyketides in the atypical angucycline family, conjugate into dimeric and even trimeric compounds in the post-biosynthesis. The formation of the C-C bond involves a non-enzymatic stereospecific coupling reaction. In this work, the unusual regio- and enantioselectivities were rationalized by density functional theory calculations with the M06-2X (SMD, water)/6-311 + G(d,p)//6-31G(d) method. These DFT calculations reproduce the lowest energy C1-(R)-C10'-(S) coupling pathway observed in a nonenzymatic reaction. Bonding of the reactive carbon atoms (C1 and C10') of the two reactant molecules maximizes the HOMO-LUMO interactions and Fukui function involving the highest occupied molecular orbital (HOMO) of nucleophile p-QM and lowest unoccupied molecular orbital (LUMO) of electrophile FST2- anion. In particular, the significant π-π stacking interactions of the low-energy pre-reaction state are retained in the lowest energy pathway for C-C coupling. The distortion/interaction-activation strain analysis indicates that the transition state (TScp-I) of the lowest energy pathway involves the highest stabilizing interactions and small distortion among all possible C-C coupling reactions. One of the two chiral centers generated in this step is lost upon aromatization of the phenol ring in the final difluostatin products. Thus, the π-π stacking interactions between the fluostatin 6-5-6 aromatic ring system play a critical role in the stereoselectivity of the nonenzymatic fluostatin conjugation.
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Affiliation(s)
- Yuanqi Wang
- State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic and Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China;
| | - Changsheng Zhang
- Key Laboratory of Tropical Marine Bio-resource and Ecology, Guangdong Key Laboratory of Marine Materia, RNAM Center for Marine Microbiology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, 164 West Xingang Road, Guangzhou 510301, China;
| | - Yi-Lei Zhao
- State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic and Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China;
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095, USA; (R.Z.); (K.N.H.)
| | - Rosalinda Zhao
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095, USA; (R.Z.); (K.N.H.)
| | - Kendall N. Houk
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095, USA; (R.Z.); (K.N.H.)
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37
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Chatterjee T, Boutin E, Robert M. Manifesto for the routine use of NMR for the liquid product analysis of aqueous CO 2 reduction: from comprehensive chemical shift data to formaldehyde quantification in water. Dalton Trans 2020; 49:4257-4265. [PMID: 32129388 DOI: 10.1039/c9dt04749b] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
CO2 reduction research is at a critical turnaround since it has the potential to partially or even substantially fulfil future clean energy needs. CO2-to-CO electrochemical conversion is getting closer from industrial implementation requirements. Efforts are now more and more directed to obtain highly reduced products such as methanol, methane, ethylene, ethanol, etc., most of them being liquids. Gas-phase products (e.g., CO, CH4) are typically detected and quantified by well-defined gas chromatography (GC and GC/MS) protocols. On the other hand, NMR, GC-MS, HPLC have been used for the liquid phase characterization, but no routine technique has yet been established, mainly due to lack of versatility of a single technique. Additionally, except NMR and GC-MS, classical techniques cannot distinguish 13C from 12C products, although it is a mandatory step to assess products origin. Herein, we show the efficiency and applicability of 1H NMR as routine technique for liquid phase products analysis and we address two previous shortcomings. We first established a comprehensive 1H and 13C NMR chemical shifts list for all 12CO2 and 13CO2 reduction products in water ranging from C1 to C3. Then we overcame the difficulty of identifying aqueous formaldehyde intermediate by 1H NMR through an efficient chemical trapping step, along with isotopic signature study. Formaldehyde can be reliably quantified in water with a concentration as low as 50 μM.
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Affiliation(s)
- Tamal Chatterjee
- Université de Paris, Laboratoire d'Electrochimie Moléculaire, CNRS, F-75013 Paris, France.
| | - Etienne Boutin
- Université de Paris, Laboratoire d'Electrochimie Moléculaire, CNRS, F-75013 Paris, France.
| | - Marc Robert
- Université de Paris, Laboratoire d'Electrochimie Moléculaire, CNRS, F-75013 Paris, France.
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Meng XJ, Pan YZ, Mo SK, Wang HS, Tang HT, Pan YM. Electrochemical α-methoxymethylation and aminomethylation of propiophenones using methanol as a green C1 source. Org Chem Front 2020. [DOI: 10.1039/d0qo00593b] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
We have developed an efficient and convenient strategy for the straightforward α-methoxymethylation and aminomethylation of a series of propiophenones.
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Affiliation(s)
- Xiu-Jin Meng
- Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources
- School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University
- Guilin 541004
- People's Republic of China
| | - Yong-Zhou Pan
- Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources
- School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University
- Guilin 541004
- People's Republic of China
| | - Shi-Kun Mo
- Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources
- School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University
- Guilin 541004
- People's Republic of China
| | - Heng-Shan Wang
- Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources
- School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University
- Guilin 541004
- People's Republic of China
| | - Hai-Tao Tang
- Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources
- School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University
- Guilin 541004
- People's Republic of China
| | - Ying-Ming Pan
- Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources
- School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University
- Guilin 541004
- People's Republic of China
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39
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Rauch M, Strater Z, Parkin G. Selective Conversion of Carbon Dioxide to Formaldehyde via a Bis(silyl)acetal: Incorporation of Isotopically Labeled C1 Moieties Derived from Carbon Dioxide into Organic Molecules. J Am Chem Soc 2019; 141:17754-17762. [DOI: 10.1021/jacs.9b08342] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Michael Rauch
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Zack Strater
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Gerard Parkin
- Department of Chemistry, Columbia University, New York, New York 10027, United States
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