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Koh M, Anselmi F, Kaushalya SK, Hernandez DE, Bast WG, Villar PS, Chae H, Davis MB, Teja SS, Qu Z, Gradinaru V, Gupta P, Banerjee A, Albeanu DF. Axially decoupled photo-stimulation and two photon readout ( ADePT) for mapping functional connectivity of neural circuits. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.02.24.639992. [PMID: 40161637 PMCID: PMC11952351 DOI: 10.1101/2025.02.24.639992] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
Abstract
All optical physiology in vivo provides a conduit for investigating the function of neural circuits in 3-D. Here, we report a new strategy for flexible, axially-decoupled photo-stimulation and two photon readout (ADePT) of neuronal activity. To achieve axially-contained widefield optogenetic patterned stimulation, we couple a digital micro-mirror device illuminated by a solid-state laser with a motorized holographic diffuser. In parallel, we use multiphoton imaging of neural activity across different z-planes. We use ADePT to analyze the excitatory and inhibitory functional connectivity of the mouse early olfactory system. Specifically, we control the activity of individual input glomeruli on the olfactory bulb surface, and map the ensuing responses of output mitral and tufted cell bodies in deeper layers. This approach identifies cohorts of sister mitral and tufted cells, whose firing is driven by the same parent glomerulus, and also reveals their differential inhibition by other glomeruli. In addition, selective optogenetic activation of glomerular GABAergic/dopaminergic (DAT+) interneurons triggers dense, but spatially heterogeneous suppression of mitral and tufted cell baseline activity and odor responses, further demonstrating specificity in the inhibitory olfactory bulb connectivity. In summary, ADePT enables high-throughput functional connectivity mapping in optically accessible brain regions.
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Affiliation(s)
- Matthew Koh
- CSHL School for Biological Sciences
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | | | | | | | | | - Pablo S. Villar
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | - Honggoo Chae
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | - Martin B. Davis
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | - Sadhu Sai Teja
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | - Zhe Qu
- California Institute of Technology, Pasadena, CA, 91125
| | | | - Priyanka Gupta
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | - Arkarup Banerjee
- CSHL School for Biological Sciences
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | - Dinu F. Albeanu
- CSHL School for Biological Sciences
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
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Meissner-Bernard C, Jenkins B, Rupprecht P, Bouldoires EA, Zenke F, Friedrich RW, Frank T. Computational functions of precisely balanced neuronal microcircuits in an olfactory memory network. Cell Rep 2025; 44:115330. [PMID: 39985769 DOI: 10.1016/j.celrep.2025.115330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2024] [Revised: 12/12/2024] [Accepted: 01/28/2025] [Indexed: 02/24/2025] Open
Abstract
Models of balanced autoassociative memory networks predict that specific inhibition is critical to store information in connectivity. To explore these predictions, we characterized and manipulated different subtypes of fast-spiking interneurons in the posterior telencephalic area Dp (pDp) of adult zebrafish, the homolog of the piriform cortex. Modeling of recurrent networks with assemblies showed that a precise balance of excitation and inhibition is important to prevent not only excessive firing rates ("runaway activity") but also the stochastic occurrence of high pattern correlations ("runaway correlations"). Consistent with model predictions, runaway correlations emerged in pDp when synaptic balance was perturbed by optogenetic manipulations of feedback inhibition but not feedforward inhibition. Runaway correlations were driven by sparse subsets of strongly active neurons rather than by a general broadening of tuning curves. These results are consistent with balanced neuronal assemblies in pDp and reveal novel computational functions of inhibitory microcircuits in an autoassociative network.
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Affiliation(s)
- Claire Meissner-Bernard
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
| | - Bethan Jenkins
- University of Göttingen, Faculty of Biology and Psychology, 37073 Göttingen, Germany; Olfactory Memory and Behavior Group, European Neuroscience Institute Göttingen - A Joint Initiative of the University Medical Center Göttingen and the Max Planck Institute for Multidisciplinary Sciences, Grisebachstraße 5, 37077 Göttingen, Germany; Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Göttingen, Germany; Göttingen Campus Institute for Dynamics of Biological Networks, 37073 Göttingen, Germany; Max Planck Institute for Biological Intelligence, Am Klopferspitz 18, 82152 Martinsried, Germany
| | - Peter Rupprecht
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland; Laboratory of Neural Circuit Dynamics, Brain Research Institute, University of Zurich, Winterthurerstrasse 190, 8057 Zürich, Switzerland; Neuroscience Center Zurich, University of Zurich, 8006 Zürich, Switzerland
| | - Estelle Arn Bouldoires
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
| | - Friedemann Zenke
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland; University of Basel, 4003 Basel, Switzerland
| | - Rainer W Friedrich
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland; University of Basel, 4003 Basel, Switzerland.
| | - Thomas Frank
- University of Göttingen, Faculty of Biology and Psychology, 37073 Göttingen, Germany; Olfactory Memory and Behavior Group, European Neuroscience Institute Göttingen - A Joint Initiative of the University Medical Center Göttingen and the Max Planck Institute for Multidisciplinary Sciences, Grisebachstraße 5, 37077 Göttingen, Germany; Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Göttingen, Germany; Göttingen Campus Institute for Dynamics of Biological Networks, 37073 Göttingen, Germany; Max Planck Institute for Biological Intelligence, Am Klopferspitz 18, 82152 Martinsried, Germany.
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Subramanian N, Wharton D, Karamched B, Bertram R, Storace DA. Heterogeneous monotonic and non-monotonic responses to odor in mitral/tufted glomeruli of the mouse olfactory bulb. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.02.28.640652. [PMID: 40093143 PMCID: PMC11908152 DOI: 10.1101/2025.02.28.640652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2025]
Abstract
Current models of olfactory sensory processing in the olfactory bulb (OB) posit that both intra- and interglomerular inhibitory circuits are involved in transforming sensory input. However, the impact of these circuits on different olfactory receptor neuron (ORNs) inputs remains poorly understood. We generated a model of the OB input-output transformation in which the output of each glomerulus is a function of its ORN input, local feed-forward intraglomerular inhibition and interglomerular normalization in which activity of each glomerulus is divided by the population response. The output of the model included linear and non-linear concentration-response relationships that depended on the input ORN Hill coefficient and half-activation value. The concentration-response relationships could be broadly categorized into four groups based on how the output response was influenced by increasing the concentration. Increasing concentration evoked monotonic increases (I) or decreases (D) in some glomeruli. Other glomeruli responded with non-monotonic decreases then increases (DI) or increased then decreased (ID). The non-monotonic ID glomeruli required interglomerular inhibition in our model, were most common in glomeruli with higher affinity ORN input and were heterogeneous in the magnitude of their drop. In vivo 2-photon Ca2+ imaging from MTC glomeruli in awake mice revealed qualitatively similar response types. Increasing levels of excitation drove higher levels of suppression in subsets of glomeruli, and nearly half of the recorded MTC glomeruli could be classified as ID. Additionally, the sensitivity of individual glomeruli was significantly correlated with the degree to which it was non-monotonic. Our results demonstrate that nonlinear responses of MTC to changes in odor concentration are not unusual, but indeed are typical, and that they can be explained by intra- and interglomerular inhibition.
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Affiliation(s)
| | - David Wharton
- Department of Mathematics, Florida State University, Tallahassee, FL
| | - Bhargav Karamched
- Program in Neuroscience, Florida State University, Tallahassee, FL
- Institute of Molecular Biophysics, Florida State University, Tallahassee, FL
- Department of Mathematics, Florida State University, Tallahassee, FL
| | - Richard Bertram
- Program in Neuroscience, Florida State University, Tallahassee, FL
- Institute of Molecular Biophysics, Florida State University, Tallahassee, FL
- Department of Mathematics, Florida State University, Tallahassee, FL
| | - Douglas A. Storace
- Department of Biological Science, Florida State University, Tallahassee, FL
- Program in Neuroscience, Florida State University, Tallahassee, FL
- Institute of Molecular Biophysics, Florida State University, Tallahassee, FL
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Hu B, Temiz NZ, Chou CN, Rupprecht P, Meissner-Bernard C, Titze B, Chung S, Friedrich RW. Representational learning by optimization of neural manifolds in an olfactory memory network. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.11.17.623906. [PMID: 39605658 PMCID: PMC11601331 DOI: 10.1101/2024.11.17.623906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2024]
Abstract
Higher brain functions depend on experience-dependent representations of relevant information that may be organized by attractor dynamics or by geometrical modifications of continuous "neural manifolds". To explore these scenarios we analyzed odor-evoked activity in telencephalic area pDp of juvenile and adult zebrafish, the homolog of piriform cortex. No obvious signatures of attractor dynamics were detected. Rather, olfactory discrimination training selectively enhanced the separation of neural manifolds representing task-relevant odors from other representations, consistent with predictions of autoassociative network models endowed with precise synaptic balance. Analytical approaches using the framework of manifold capacity revealed multiple geometrical modifications of representational manifolds that supported the classification of task-relevant sensory information. Manifold capacity predicted odor discrimination across individuals, indicating a close link between manifold geometry and behavior. Hence, pDp and possibly related recurrent networks store information in the geometry of representational manifolds, resulting in joint sensory and semantic maps that may support distributed learning processes.
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Affiliation(s)
- Bo Hu
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
- University of Basel, 4003 Basel, Switzerland
| | - Nesibe Z. Temiz
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
- University of Basel, 4003 Basel, Switzerland
| | - Chi-Ning Chou
- Center for Computational Neuroscience, Flatiron Institute, New York, NY, USA
| | - Peter Rupprecht
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
- Neuroscience Center Zurich, 8057 Zurich, Switzerland
- Brain Research Institute, University of Zurich, 8057 Zurich, Switzerland
| | - Claire Meissner-Bernard
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
| | - Benjamin Titze
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
| | - SueYeon Chung
- Center for Computational Neuroscience, Flatiron Institute, New York, NY, USA
- Center for Neural Science, New York University, New York, NY, USA
| | - Rainer W. Friedrich
- Friedrich Miescher Institute for Biomedical Research, Fabrikstrasse 24, 4056 Basel, Switzerland
- University of Basel, 4003 Basel, Switzerland
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Grimaud J, Dorrell W, Jayakumar S, Pehlevan C, Murthy V. Bilateral Alignment of Receptive Fields in the Olfactory Cortex. eNeuro 2024; 11:ENEURO.0155-24.2024. [PMID: 39433407 PMCID: PMC11540595 DOI: 10.1523/eneuro.0155-24.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2024] [Revised: 09/06/2024] [Accepted: 10/11/2024] [Indexed: 10/23/2024] Open
Abstract
Each olfactory cortical hemisphere receives ipsilateral odor information directly from the olfactory bulb and contralateral information indirectly from the other cortical hemisphere. Since neural projections to the olfactory cortex (OC) are disordered and nontopographic, spatial information cannot be used to align projections from the two sides like in the visual cortex. Therefore, how bilateral information is integrated in individual cortical neurons is unknown. We have found, in mice, that the odor responses of individual neurons to selective stimulation of each of the two nostrils are significantly correlated, such that odor identity decoding optimized with information arriving from one nostril transfers very well to the other side. Nevertheless, these aligned responses are asymmetric enough to allow decoding of stimulus laterality. Computational analysis shows that such matched odor tuning is incompatible with purely random connections but is explained readily by Hebbian plasticity structuring bilateral connectivity. Our data reveal that despite the distributed and fragmented sensory representation in the OC, odor information across the two hemispheres is highly coordinated.
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Affiliation(s)
- Julien Grimaud
- Molecules, Cells, and Organisms Graduate Program, Harvard University, Cambridge, Massachusetts 02138
- Department of Molecular and Cellular Biology and Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
- Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
- Cell Engineering Laboratory (CellTechs), SupBiotech, 94800 Villejuif, France
| | - William Dorrell
- Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138
| | - Siddharth Jayakumar
- Department of Molecular and Cellular Biology and Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
- Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
| | - Cengiz Pehlevan
- Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138
- Kempner Institute for Natural and Artificial Intelligence, Harvard University, Cambridge, Massachusetts 02138
| | - Venkatesh Murthy
- Department of Molecular and Cellular Biology and Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
- Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138
- Kempner Institute for Natural and Artificial Intelligence, Harvard University, Cambridge, Massachusetts 02138
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6
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Giaffar H, Shuvaev S, Rinberg D, Koulakov AA. The primacy model and the structure of olfactory space. PLoS Comput Biol 2024; 20:e1012379. [PMID: 39255274 PMCID: PMC11423968 DOI: 10.1371/journal.pcbi.1012379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Revised: 09/25/2024] [Accepted: 07/30/2024] [Indexed: 09/12/2024] Open
Abstract
Understanding sensory processing involves relating the stimulus space, its neural representation, and perceptual quality. In olfaction, the difficulty in establishing these links lies partly in the complexity of the underlying odor input space and perceptual responses. Based on the recently proposed primacy model for concentration invariant odor identity representation and a few assumptions, we have developed a theoretical framework for mapping the odor input space to the response properties of olfactory receptors. We analyze a geometrical structure containing odor representations in a multidimensional space of receptor affinities and describe its low-dimensional implementation, the primacy hull. We propose the implications of the primacy hull for the structure of feedforward connectivity in early olfactory networks. We test the predictions of our theory by comparing the existing receptor-ligand affinity and connectivity data obtained in the fruit fly olfactory system. We find that the Kenyon cells of the insect mushroom body integrate inputs from the high-affinity (primacy) sets of olfactory receptors in agreement with the primacy theory.
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Affiliation(s)
- Hamza Giaffar
- Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America
| | - Sergey Shuvaev
- Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America
| | - Dmitry Rinberg
- Neuroscience Institute, New York University Langone Health, New York, New York, United States of America
- Center for Neural Science, New York University, New York, New York, United States of America
| | - Alexei A. Koulakov
- Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America
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Chapochnikov NM, Pehlevan C, Chklovskii DB. Normative and mechanistic model of an adaptive circuit for efficient encoding and feature extraction. Proc Natl Acad Sci U S A 2023; 120:e2117484120. [PMID: 37428907 PMCID: PMC10629579 DOI: 10.1073/pnas.2117484120] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Accepted: 05/08/2023] [Indexed: 07/12/2023] Open
Abstract
One major question in neuroscience is how to relate connectomes to neural activity, circuit function, and learning. We offer an answer in the peripheral olfactory circuit of the Drosophila larva, composed of olfactory receptor neurons (ORNs) connected through feedback loops with interconnected inhibitory local neurons (LNs). We combine structural and activity data and, using a holistic normative framework based on similarity-matching, we formulate biologically plausible mechanistic models of the circuit. In particular, we consider a linear circuit model, for which we derive an exact theoretical solution, and a nonnegative circuit model, which we examine through simulations. The latter largely predicts the ORN [Formula: see text] LN synaptic weights found in the connectome and demonstrates that they reflect correlations in ORN activity patterns. Furthermore, this model accounts for the relationship between ORN [Formula: see text] LN and LN-LN synaptic counts and the emergence of different LN types. Functionally, we propose that LNs encode soft cluster memberships of ORN activity, and partially whiten and normalize the stimulus representations in ORNs through inhibitory feedback. Such a synaptic organization could, in principle, autonomously arise through Hebbian plasticity and would allow the circuit to adapt to different environments in an unsupervised manner. We thus uncover a general and potent circuit motif that can learn and extract significant input features and render stimulus representations more efficient. Finally, our study provides a unified framework for relating structure, activity, function, and learning in neural circuits and supports the conjecture that similarity-matching shapes the transformation of neural representations.
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Affiliation(s)
- Nikolai M. Chapochnikov
- Center for Computation Neuroscience, Flatiron Institute, New York, NY10010
- Department of Neurology, New York University School of Medicine, New York, NY10016
| | - Cengiz Pehlevan
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Center for Brain Science, Harvard University, Cambridge, MA02138
- Kempner Institute for the Study of Natural and Artificial Intelligence, Harvard University, Cambridge, MA02138
| | - Dmitri B. Chklovskii
- Center for Computation Neuroscience, Flatiron Institute, New York, NY10010
- Neuroscience Institute, New York University School of Medicine, New York, NY10016
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Marachlian E, Huerta R, Locatelli FF. Gain modulation and odor concentration invariance in early olfactory networks. PLoS Comput Biol 2023; 19:e1011176. [PMID: 37343029 DOI: 10.1371/journal.pcbi.1011176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Accepted: 05/11/2023] [Indexed: 06/23/2023] Open
Abstract
The broad receptive field of the olfactory receptors constitutes the basis of a combinatorial code that allows animals to detect and discriminate many more odorants than the actual number of receptor types that they express. One drawback is that high odor concentrations recruit lower affinity receptors which can lead to the perception of qualitatively different odors. Here we addressed the contribution that signal-processing in the antennal lobe makes to reduce concentration dependence in odor representation. By means of calcium imaging and pharmacological approach we describe the contribution that GABA receptors play in terms of the amplitude and temporal profiles of the signals that convey odor information from the antennal lobes to higher brain centers. We found that GABA reduces the amplitude of odor elicited signals and the number of glomeruli that are recruited in an odor-concentration-dependent manner. Blocking GABA receptors decreases the correlation among glomerular activity patterns elicited by different concentrations of the same odor. In addition, we built a realistic mathematical model of the antennal lobe that was used to test the viability of the proposed mechanisms and to evaluate the processing properties of the AL network under conditions that cannot be achieved in physiology experiments. Interestingly, even though based on a rather simple topology and cell interactions solely mediated by GABAergic lateral inhibitions, the AL model reproduced key features of the AL response upon different odor concentrations and provides plausible solutions for concentration invariant recognition of odors by artificial sensors.
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Affiliation(s)
- Emiliano Marachlian
- Instituto de Fisiología Biología Molecular y Neurociencias (IFIByNE-UBA-CONICET) and Departamento de Fisiología, Biología Molecular y Celular, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
- Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
| | - Ramón Huerta
- BioCircuits Institute, University of California San Diego, La Jolla, California, United States of America
| | - Fernando F Locatelli
- Instituto de Fisiología Biología Molecular y Neurociencias (IFIByNE-UBA-CONICET) and Departamento de Fisiología, Biología Molecular y Celular, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
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9
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Zhao Y, Duan J, Han Z, Engström Y, Hartenstein V. Identification of a GABAergic neuroblast lineage modulating sweet and bitter taste sensitivity. Curr Biol 2022; 32:5354-5363.e3. [PMID: 36347251 PMCID: PMC10728805 DOI: 10.1016/j.cub.2022.10.029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 06/16/2022] [Accepted: 10/14/2022] [Indexed: 11/09/2022]
Abstract
In Drosophila melanogaster, processing of gustatory information and controlling feeding behavior are executed by neural circuits located in the subesophageal zone (SEZ) of the brain.1 Gustatory receptor neurons (GRNs) project their axons in the primary gustatory center (PGC), which is located in the SEZ.1,2,3,4 To address the function of the PGC, we need detailed information about the different classes of gustatory interneurons that frame the PGC. In this work, we screened large collections of driver lines for SEZ interneuron-specific labeling and subsequently used candidate lines to access the SEZ neuroblast lineages. We converted 130 Gal4 lines to LexA drivers and carried out functional screening using calcium imaging. We found one neuroblast lineage, TRdm, whose neurons responded to both sweet and bitter tastants, and formed green fluorescent protein (GFP) reconstitution across synaptic partners (GRASP)-positive synapses with sweet sensory neurons. TRdm neurons express the inhibitory transmitter GABA, and silencing these neurons increases appetitive feeding behavior. These results demonstrate that TRdm generates a class of inhibitory local neurons that control taste sensitivity in Drosophila.
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Affiliation(s)
- Yunpo Zhao
- Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 106 91 Stockholm, Sweden; Biozentrum, University of Basel, 4056 Basel, Switzerland; Center for Precision Disease Modeling, University of Maryland School of Medicine, Baltimore 21201, USA.
| | - Jianli Duan
- Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 106 91 Stockholm, Sweden; Center for Precision Disease Modeling, University of Maryland School of Medicine, Baltimore 21201, USA
| | - Zhe Han
- Center for Precision Disease Modeling, University of Maryland School of Medicine, Baltimore 21201, USA
| | - Ylva Engström
- Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 106 91 Stockholm, Sweden
| | - Volker Hartenstein
- Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles 90095-1606, USA.
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Vaughn MJ, Haas JS. On the Diverse Functions of Electrical Synapses. Front Cell Neurosci 2022; 16:910015. [PMID: 35755782 PMCID: PMC9219736 DOI: 10.3389/fncel.2022.910015] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 05/25/2022] [Indexed: 11/13/2022] Open
Abstract
Electrical synapses are the neurophysiological product of gap junctional pores between neurons that allow bidirectional flow of current between neurons. They are expressed throughout the mammalian nervous system, including cortex, hippocampus, thalamus, retina, cerebellum, and inferior olive. Classically, the function of electrical synapses has been associated with synchrony, logically following that continuous conductance provided by gap junctions facilitates the reduction of voltage differences between coupled neurons. Indeed, electrical synapses promote synchrony at many anatomical and frequency ranges across the brain. However, a growing body of literature shows there is greater complexity to the computational function of electrical synapses. The paired membranes that embed electrical synapses act as low-pass filters, and as such, electrical synapses can preferentially transfer spike after hyperpolarizations, effectively providing spike-dependent inhibition. Other functions include driving asynchronous firing, improving signal to noise ratio, aiding in discrimination of dissimilar inputs, or dampening signals by shunting current. The diverse ways by which electrical synapses contribute to neuronal integration merits furthers study. Here we review how functions of electrical synapses vary across circuits and brain regions and depend critically on the context of the neurons and brain circuits involved. Computational modeling of electrical synapses embedded in multi-cellular models and experiments utilizing optical control and measurement of cellular activity will be essential in determining the specific roles performed by electrical synapses in varying contexts.
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Affiliation(s)
- Mitchell J Vaughn
- Department of Biological Sciences, Lehigh University, Bethlehem, PA, United States
| | - Julie S Haas
- Department of Biological Sciences, Lehigh University, Bethlehem, PA, United States
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11
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Villar PS, Hu R, Araneda RC. Long-Range GABAergic Inhibition Modulates Spatiotemporal Dynamics of the Output Neurons in the Olfactory Bulb. J Neurosci 2021; 41:3610-3621. [PMID: 33687961 PMCID: PMC8055075 DOI: 10.1523/jneurosci.1498-20.2021] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Revised: 02/19/2021] [Accepted: 02/26/2021] [Indexed: 11/21/2022] Open
Abstract
Local interneurons of the olfactory bulb (OB) are densely innervated by long-range GABAergic neurons from the basal forebrain (BF), suggesting that this top-down inhibition regulates early processing in the olfactory system. However, how GABAergic inputs modulate the OB output neurons, the mitral/tufted cells, is unknown. Here, in male and female mice acute brain slices, we show that optogenetic activation of BF GABAergic inputs produced distinct local circuit effects that can influence the activity of mitral/tufted cells in the spatiotemporal domains. Activation of the GABAergic axons produced a fast disinhibition of mitral/tufted cells consistent with a rapid and synchronous release of GABA onto local interneurons in the glomerular and inframitral circuits of the OB, which also reduced the spike precision of mitral/tufted cells in response to simulated stimuli. In addition, BF GABAergic inhibition modulated local oscillations in a layer-specific manner. The intensity of locally evoked θ oscillations was decreased on activation of top-down inhibition in the glomerular circuit, while evoked γ oscillations were reduced by inhibition of granule cells. Furthermore, BF GABAergic input reduced dendrodendritic inhibition in mitral/tufted cells. Together, these results suggest that long-range GABAergic neurons from the BF are well suited to influence temporal and spatial aspects of processing by OB circuits.SIGNIFICANCE STATEMENT Disruption of GABAergic inhibition from the basal forebrain (BF) to the olfactory bulb (OB) impairs the discrimination of similar odors, yet how this centrifugal inhibition influences neuronal circuits in the OB remains unclear. Here, we show that the BF GABAergic neurons exclusively target local inhibitory neurons in the OB, having a functional disinhibitory effect on the output neurons, the mitral cells. Phasic inhibition by BF GABAergic neurons reduces spike precision of mitral cells and lowers the intensity of oscillatory activity in the OB, while directly modulating the extent of dendrodendritic inhibition. These circuit-level effects of this centrifugal inhibition can influence the temporal and spatial dynamics of odor coding in the OB.
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Affiliation(s)
- Pablo S Villar
- Department of Biology, University of Maryland, College Park, Maryland 20742
| | - Ruilong Hu
- Department of Biology, University of Maryland, College Park, Maryland 20742
| | - Ricardo C Araneda
- Department of Biology, University of Maryland, College Park, Maryland 20742
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12
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Friedrich RW, Wanner AA. Dense Circuit Reconstruction to Understand Neuronal Computation: Focus on Zebrafish. Annu Rev Neurosci 2021; 44:275-293. [PMID: 33730512 DOI: 10.1146/annurev-neuro-110220-013050] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The dense reconstruction of neuronal wiring diagrams from volumetric electron microscopy data has the potential to generate fundamentally new insights into mechanisms of information processing and storage in neuronal circuits. Zebrafish provide unique opportunities for dynamical connectomics approaches that combine reconstructions of wiring diagrams with measurements of neuronal population activity and behavior. Such approaches have the power to reveal higher-order structure in wiring diagrams that cannot be detected by sparse sampling of connectivity and that is essential for neuronal computations. In the brain stem, recurrently connected neuronal modules were identified that can account for slow, low-dimensional dynamics in an integrator circuit. In the spinal cord, connectivity specifies functional differences between premotor interneurons. In the olfactory bulb, tuning-dependent connectivity implements a whitening transformation that is based on the selective suppression of responses to overrepresented stimulus features. These findings illustrate the potential of dynamical connectomics in zebrafish to analyze the circuit mechanisms underlying higher-order neuronal computations.
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Affiliation(s)
- Rainer W Friedrich
- Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland; .,Faculty of Natural Sciences, University of Basel, 4003 Basel, Switzerland
| | - Adrian A Wanner
- Princeton Neuroscience Institute, Princeton University, Princeton, New Jersey 08544, USA;
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13
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Rabinowitch I, Upadhyaya B, Pant A, Galski D, Kreines L, Bai J. Circumventing neural damage in a C. elegans chemosensory circuit using genetically engineered synapses. Cell Syst 2021; 12:263-271.e4. [PMID: 33472027 PMCID: PMC7979504 DOI: 10.1016/j.cels.2020.12.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Revised: 11/03/2020] [Accepted: 12/22/2020] [Indexed: 10/22/2022]
Abstract
Neuronal loss can considerably diminish neural circuit function, impairing normal behavior by disrupting information flow in the circuit. Here, we use genetically engineered electrical synapses to reroute the flow of information in a C. elegans damaged chemosensory circuit in order to restore organism behavior. We impaired chemotaxis by removing one pair of interneurons from the circuit then artificially coupled two other adjacent neuron pairs by ectopically expressing the gap junction protein, connexin, in them. This restored chemotaxis in the animals. We expected to observe linear and direct information flow between the connexin-coupled neurons in the recovered circuit but also revealed the formation of new potent left-right lateral electrical connections within the connexin-expressing neuron pairs. Our analysis suggests that these additional electrical synapses help restore circuit function by amplifying weakened neuronal signals in the damaged circuit in addition to emulating the wild-type circuit. A record of this paper's transparent peer review process is included in the Supplemental Information.
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Affiliation(s)
- Ithai Rabinowitch
- Department of Medical Neurobiology, IMRIC - Institute for Medical Research Israel-Canada, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 9112002, Israel.
| | - Bishal Upadhyaya
- Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA
| | - Aaradhya Pant
- Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA
| | - Dolev Galski
- Department of Medical Neurobiology, IMRIC - Institute for Medical Research Israel-Canada, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 9112002, Israel
| | - Lena Kreines
- Department of Medical Neurobiology, IMRIC - Institute for Medical Research Israel-Canada, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 9112002, Israel
| | - Jihong Bai
- Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
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14
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Zhang X, Meeks JP. Paradoxically Sparse Chemosensory Tuning in Broadly Integrating External Granule Cells in the Mouse Accessory Olfactory Bulb. J Neurosci 2020; 40:5247-5263. [PMID: 32503886 PMCID: PMC7329303 DOI: 10.1523/jneurosci.2238-19.2020] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 04/20/2020] [Accepted: 04/23/2020] [Indexed: 12/20/2022] Open
Abstract
The accessory olfactory bulb (AOB), the first neural circuit in the mouse accessory olfactory system, is critical for interpreting social chemosignals. Despite its importance, AOB information processing is poorly understood compared with the main olfactory bulb (MOB). Here, we sought to fill gaps in the understanding of AOB interneuron function. We used 2-photon GCaMP6f Ca2+ imaging in an ex vivo preparation to study chemosensory tuning in AOB external granule cells (EGCs), interneurons hypothesized to broadly inhibit activity in excitatory mitral cells (MCs). In ex vivo preparations from mice of both sexes, we measured MC and EGC tuning to natural chemosignal blends and monomolecular ligands, finding that EGC tuning was sparser, not broader, than upstream MCs. Simultaneous electrophysiological recording and Ca2+ imaging showed no differences in GCaMP6f-to-spiking relationships in these cell types during simulated sensory stimulation, suggesting that measured EGC sparseness was not due to cell type-dependent variability in GCaMP6f performance. Ex vivo patch-clamp recordings revealed that EGC subthreshold responsivity was far broader than indicated by GCaMP6f Ca2+ imaging, and that monomolecular ligands rarely elicited EGC spiking. These results indicate that EGCs are selectively engaged by chemosensory blends, suggesting different roles for EGCs than analogous interneurons in the MOB.SIGNIFICANCE STATEMENT The mouse accessory olfactory system (AOS) interprets social chemosignals, but we poorly understand AOS information processing. Here, we investigate the functional properties of external granule cells (EGCs), a major class of interneurons in the accessory olfactory bulb (AOB). We hypothesized that EGCs, which are densely innervated by excitatory mitral cells (MCs), would show broad chemosensory tuning, suggesting a role in divisive normalization. Using ex vivo GCaMP6f imaging, we found that EGCs were instead more sparsely tuned than MCs. This was not due to weaker GCaMP6f signaling in EGCs than in MCs. Instead, we found that many MC-activating chemosignals caused only subthreshold EGC responses. This indicates a different role for AOB EGCs compared with analogous cells in the main olfactory bulb.
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Affiliation(s)
- Xingjian Zhang
- University of Texas Southwestern Medical Center, Dallas, Texas 75390
| | - Julian P Meeks
- University of Texas Southwestern Medical Center, Dallas, Texas 75390
- University of Rochester School of Medicine and Dentistry, Rochester, NY, 14642
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15
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Whitening of odor representations by the wiring diagram of the olfactory bulb. Nat Neurosci 2020; 23:433-442. [PMID: 31959937 PMCID: PMC7101160 DOI: 10.1038/s41593-019-0576-z] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2019] [Accepted: 12/12/2019] [Indexed: 11/08/2022]
Abstract
Neuronal computations underlying higher brain functions depend on synaptic interactions among specific neurons. A mechanistic understanding of such computations requires wiring diagrams of neuronal networks. In this study, we examined how the olfactory bulb (OB) performs 'whitening', a fundamental computation that decorrelates activity patterns and supports their classification by memory networks. We measured odor-evoked activity in the OB of a zebrafish larva and subsequently reconstructed the complete wiring diagram by volumetric electron microscopy. The resulting functional connectome revealed an over-representation of multisynaptic connectivity motifs that mediate reciprocal inhibition between neurons with similar tuning. This connectivity suppressed redundant responses and was necessary and sufficient to reproduce whitening in simulations. Whitening of odor representations is therefore mediated by higher-order structure in the wiring diagram that is adapted to natural input patterns.
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16
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Odor-Induced Multi-Level Inhibitory Maps in Drosophila. eNeuro 2020; 7:ENEURO.0213-19.2019. [PMID: 31888962 PMCID: PMC6957311 DOI: 10.1523/eneuro.0213-19.2019] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Revised: 12/06/2019] [Accepted: 12/16/2019] [Indexed: 12/04/2022] Open
Abstract
Optical imaging of intracellular Ca2+ influx as a correlate of neuronal excitation represents a standard technique for visualizing spatiotemporal activity of neuronal networks. However, the information-processing properties of single neurons and neuronal circuits likewise involve inhibition of neuronal membrane potential. Here, we report spatially resolved optical imaging of odor-evoked inhibitory patterns in the olfactory circuitry of Drosophila using a genetically encoded fluorescent Cl- sensor. In combination with the excitatory component reflected by intracellular Ca2+ dynamics, we present a comprehensive functional map of both odor-evoked neuronal activation and inhibition at different levels of olfactory processing. We demonstrate that odor-evoked inhibition carried by Cl- influx is present both in sensory neurons and second-order projection neurons (PNs), and is characterized by stereotypic, odor-specific patterns. Cl--mediated inhibition features distinct dynamics in different neuronal populations. Our data support a dual role of inhibitory neurons in the olfactory system: global gain control across the neuronal circuitry and glomerulus-specific inhibition to enhance neuronal information processing.
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17
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Abstract
The zebrafish (Danio rerio) has emerged as a widely used model system during the last four decades. The fact that the zebrafish larva is transparent enables sophisticated in vivo imaging, including calcium imaging of intracellular transients in many different tissues. While being a vertebrate, the reduced complexity of its nervous system and small size make it possible to follow large-scale activity in the whole brain. Its genome is sequenced and many genetic and molecular tools have been developed that simplify the study of gene function in health and disease. Since the mid 90's, the development and neuronal function of the embryonic, larval, and later, adult zebrafish have been studied using calcium imaging methods. This updated chapter is reviewing the advances in methods and research findings of zebrafish calcium imaging during the last decade. The choice of calcium indicator depends on the desired number of cells to study and cell accessibility. Synthetic calcium indicators, conjugated to dextrans and acetoxymethyl (AM) esters, are still used to label specific neuronal cell types in the hindbrain and the olfactory system. However, genetically encoded calcium indicators, such as aequorin and the GCaMP family of indicators, expressed in various tissues by the use of cell-specific promoters, are now the choice for most applications, including brain-wide imaging. Calcium imaging in the zebrafish has contributed greatly to our understanding of basic biological principles during development and adulthood, and the function of disease-related genes in a vertebrate system.
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18
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Chen B, Su M, Pan Q, Zhang Z, Chen S, Huang Z, Cai Z, Li Z, Qian X, Hu X, Song Y. Fully Printed Geranium-Inspired Encapsulated Arrays for Quantitative Odor Releasing. ACS OMEGA 2019; 4:19977-19982. [PMID: 31788631 PMCID: PMC6882128 DOI: 10.1021/acsomega.9b02916] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Accepted: 10/18/2019] [Indexed: 06/10/2023]
Abstract
Olfactory is an extremely fine way of perception. However, the process of smelling is prone to various interference factors. Further development to enhance the communication desires an odor-releasing strategy, which could quantitatively offer a variety of fragrances. Here, we report a fully printing strategy to heterogeneously integrate odor-containing materials and protective coating films. Inspired from the fragrance-containing drum structure on the geranium leaf, encapsulated arrays are fully printed on the flexible or rigid substrates with more than 20 spices. Quantitative concentrations of odor molecules can be released from the encapsulated arrays after scraping the protective poly(lactic-co-glycolic) acid (PLGA) shells. Importantly, various odor-based arrays are printed on the same flexible substrate, which permits selective releasing and arbitrary mixing of the spices. Effective odor-releasing properties of encapsulated arrays make them promising for food security and anticounterfeiting, investigating olfactory discrimination abilities, and strengthening olfactory communication.
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Affiliation(s)
- Bingda Chen
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
| | - Meng Su
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
| | - Qi Pan
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
| | - Zeying Zhang
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
| | - Shuoran Chen
- Research Center for Green Printing Nanophotonic
Materials, Suzhou University of Science
and Technology, 215009 Suzhou, P. R. China
| | - Zhandong Huang
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
| | - Zheren Cai
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
| | - Zheng Li
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
| | - Xin Qian
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
| | - Xiaotian Hu
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
| | - Yanlin Song
- Key Laboratory of
Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center
of Nanomaterials for Green Printing Technology, Beijing National Laboratory
for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No.19A, 100049 Beijing, P. R. China
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19
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Frank T, Mönig NR, Satou C, Higashijima SI, Friedrich RW. Associative conditioning remaps odor representations and modifies inhibition in a higher olfactory brain area. Nat Neurosci 2019; 22:1844-1856. [PMID: 31591559 PMCID: PMC6858881 DOI: 10.1038/s41593-019-0495-z] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2018] [Accepted: 08/09/2019] [Indexed: 11/30/2022]
Abstract
Intelligent behavior involves associations between high-dimensional sensory representations and behaviorally relevant qualities such as valence. Learning of associations involves plasticity of excitatory connectivity but it remains poorly understood how information flow is reorganized in networks and how inhibition contributes to this process. We trained adult zebrafish in an appetitive odor discrimination task and analyzed odor representations in a specific compartment of telencephalic area Dp, the homolog of olfactory cortex. Associative conditioning enhanced responses with a preference for the positively conditioned odor (CS+). Moreover, conditioning systematically remapped odor representations along an axis in coding space that represented attractiveness (valence). Inter-individual variations in this mapping predicted variations in behavioral odor preference. Photoinhibition of interneurons resulted in specific modifications of odor representations that mirrored effects of conditioning and reduced experience-dependent, inter-individual variations in odor-valence mapping. These results reveal an individualized odor-to-valence map that is shaped by inhibition and reorganized during learning.
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Affiliation(s)
- Thomas Frank
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
| | - Nila R Mönig
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.,University of Basel, Basel, Switzerland
| | - Chie Satou
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland
| | - Shin-Ichi Higashijima
- National Institutes of Natural Sciences, Exploratory Research Center on Life and Living Systems, National Institute for Basic Biology, Okazaki, Japan
| | - Rainer W Friedrich
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland. .,University of Basel, Basel, Switzerland.
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20
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Storace DA, Cohen LB, Choi Y. Using Genetically Encoded Voltage Indicators (GEVIs) to Study the Input-Output Transformation of the Mammalian Olfactory Bulb. Front Cell Neurosci 2019; 13:342. [PMID: 31417362 PMCID: PMC6684792 DOI: 10.3389/fncel.2019.00342] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Accepted: 07/11/2019] [Indexed: 12/19/2022] Open
Abstract
Genetically encoded voltage indicators (GEVIs) are fluorescent protein reporters of membrane potential. These tools can, in principle, be used to monitor the neural activity of genetically distinct cell types in the brain. Although introduced in 1997, they have been a challenge to use to study intact neural circuits due to a combination of small signal-to-noise ratio, slow kinetics, and poor membrane expression. New strategies have yielded novel GEVIs such as ArcLight, which have improved properties. Here, we compare the in vivo properties of ArcLight with Genetically Encoded Calcium Indicators (GECIs) in the mouse olfactory bulb. We show how voltage imaging can be combined with organic calcium sensitive dyes to measure the input-output transformation of the olfactory bulb. Finally, we demonstrate that ArcLight can be targeted to olfactory bulb interneurons. The olfactory bulb contributes substantially to the perception of the concentration invariance of odor recognition.
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Affiliation(s)
- Douglas A Storace
- Department of Biological Science, Florida State University, Tallahassee, FL, United States.,Department of Cellular and Molecular Physiology, Yale School of Medicine, Yale University, New Haven, CT, United States
| | - Lawrence B Cohen
- Department of Cellular and Molecular Physiology, Yale School of Medicine, Yale University, New Haven, CT, United States.,Center for Functional Connectomics, Korea Institute of Science and Technology, Seoul, South Korea
| | - Yunsook Choi
- Department of Cellular and Molecular Physiology, Yale School of Medicine, Yale University, New Haven, CT, United States.,Center for Functional Connectomics, Korea Institute of Science and Technology, Seoul, South Korea
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21
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Bolding KA, Franks KM. Recurrent cortical circuits implement concentration-invariant odor coding. Science 2018; 361:361/6407/eaat6904. [PMID: 30213885 DOI: 10.1126/science.aat6904] [Citation(s) in RCA: 113] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2018] [Accepted: 08/03/2018] [Indexed: 12/28/2022]
Abstract
Animals rely on olfaction to find food, attract mates, and avoid predators. To support these behaviors, they must be able to identify odors across different odorant concentrations. The neural circuit operations that implement this concentration invariance remain unclear. We found that despite concentration-dependence in the olfactory bulb (OB), representations of odor identity were preserved downstream, in the piriform cortex (PCx). The OB cells responding earliest after inhalation drove robust responses in sparse subsets of PCx neurons. Recurrent collateral connections broadcast their activation across the PCx, recruiting global feedback inhibition that rapidly truncated and suppressed cortical activity for the remainder of the sniff, discounting the impact of slower, concentration-dependent OB inputs. Eliminating recurrent collateral output amplified PCx odor responses rendered the cortex steeply concentration-dependent and abolished concentration-invariant identity decoding.
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Affiliation(s)
- Kevin A Bolding
- Department of Neurobiology, Duke University Medical School, Durham, NC, USA
| | - Kevin M Franks
- Department of Neurobiology, Duke University Medical School, Durham, NC, USA.
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22
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Wanner AA, Vishwanathan A. Methods for Mapping Neuronal Activity to Synaptic Connectivity: Lessons From Larval Zebrafish. Front Neural Circuits 2018; 12:89. [PMID: 30410437 PMCID: PMC6209671 DOI: 10.3389/fncir.2018.00089] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Accepted: 09/28/2018] [Indexed: 12/29/2022] Open
Abstract
For a mechanistic understanding of neuronal circuits in the brain, a detailed description of information flow is necessary. Thereby it is crucial to link neuron function to the underlying circuit structure. Multiphoton calcium imaging is the standard technique to record the activity of hundreds of neurons simultaneously. Similarly, recent advances in high-throughput electron microscopy techniques allow for the reconstruction of synaptic resolution wiring diagrams. These two methods can be combined to study both function and structure in the same specimen. Due to its small size and optical transparency, the larval zebrafish brain is one of the very few vertebrate systems where both, activity and connectivity of all neurons from entire, anatomically defined brain regions, can be analyzed. Here, we describe different methods and the tools required for combining multiphoton microscopy with dense circuit reconstruction from electron microscopy stacks of entire brain regions in the larval zebrafish.
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Affiliation(s)
- Adrian A Wanner
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, United States
| | - Ashwin Vishwanathan
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, United States
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23
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Rapid olfactory discrimination learning in adult zebrafish. Exp Brain Res 2018; 236:2959-2969. [PMID: 30088022 PMCID: PMC6223846 DOI: 10.1007/s00221-018-5352-x] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2018] [Accepted: 08/02/2018] [Indexed: 01/24/2023]
Abstract
The zebrafish is a model organism to study olfactory information processing, but efficient behavioral procedures to analyze olfactory discrimination and memory are lacking. We devised an automated odor discrimination task for adult zebrafish based on olfactory conditioning of feeding behavior. Presentation of a conditioned odor (CS+), but not a neutral odor (CS−) was followed by food delivery at a specific location. Fish developed differential behavioral responses to CS+ and CS− within a few trials. The behavioral response to the CS+ was complex and included components reminiscent of food search such as increased swimming speed and water surface sampling. Appetitive behavior was therefore quantified by a composite score that combined measurements of multiple behavioral parameters. Robust discrimination behavior was observed in different strains, even when odors were chemically similar, and learned preferences could overcome innate odor preferences. These results confirm that zebrafish can rapidly learn to make fine odor discriminations. The procedure is efficient and provides novel opportunities to dissect the neural mechanisms underlying olfactory discrimination and memory.
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24
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Jacobson GA, Rupprecht P, Friedrich RW. Experience-Dependent Plasticity of Odor Representations in the Telencephalon of Zebrafish. Curr Biol 2018; 28:1-14.e3. [DOI: 10.1016/j.cub.2017.11.007] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Revised: 10/16/2017] [Accepted: 11/01/2017] [Indexed: 11/26/2022]
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25
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Measuring the olfactory bulb input-output transformation reveals a contribution to the perception of odorant concentration invariance. Nat Commun 2017; 8:81. [PMID: 28724907 PMCID: PMC5517565 DOI: 10.1038/s41467-017-00036-2] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2016] [Accepted: 05/01/2017] [Indexed: 11/23/2022] Open
Abstract
Humans and other animals can recognize an odorant as the same over a range of odorant concentrations. It remains unclear whether the olfactory bulb, the brain structure that mediates the first stage of olfactory information processing, participates in generating this perceptual concentration invariance. Olfactory bulb glomeruli are regions of neuropil that contain input and output processes: olfactory receptor neuron nerve terminals (input) and mitral/tufted cell apical dendrites (output). Differences between the input and output of a brain region define the function(s) carried out by that region. Here we compare the activity signals from the input and output across a range of odorant concentrations. The output maps maintain a relatively stable representation of odor identity over the tested concentration range, even though the input maps and signals change markedly. These results provide direct evidence that the mammalian olfactory bulb likely participates in generating the perception of concentration invariance of odor quality. Humans and animals recognize an odorant across a range of odorant concentrations, but where in the olfactory processing pathway this invariance is generated is unclear. By measuring and comparing olfactory bulb outputs to inputs, the authors show that the olfactory bulb participates in generating the perception of odorant concentration invariance.
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26
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Roland B, Deneux T, Franks KM, Bathellier B, Fleischmann A. Odor identity coding by distributed ensembles of neurons in the mouse olfactory cortex. eLife 2017; 6:e26337. [PMID: 28489003 PMCID: PMC5438249 DOI: 10.7554/elife.26337] [Citation(s) in RCA: 89] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2017] [Accepted: 04/29/2017] [Indexed: 11/18/2022] Open
Abstract
Olfactory perception and behaviors critically depend on the ability to identify an odor across a wide range of concentrations. Here, we use calcium imaging to determine how odor identity is encoded in olfactory cortex. We find that, despite considerable trial-to-trial variability, odor identity can accurately be decoded from ensembles of co-active neurons that are distributed across piriform cortex without any apparent spatial organization. However, piriform response patterns change substantially over a 100-fold change in odor concentration, apparently degrading the population representation of odor identity. We show that this problem can be resolved by decoding odor identity from a subpopulation of concentration-invariant piriform neurons. These concentration-invariant neurons are overrepresented in piriform cortex but not in olfactory bulb mitral and tufted cells. We therefore propose that distinct perceptual features of odors are encoded in independent subnetworks of neurons in the olfactory cortex.
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Affiliation(s)
- Benjamin Roland
- Center for Interdisciplinary Research in Biology (CIRB), Collège de France, CNRS UMR 7241, INSERM U1050, Paris, France
| | - Thomas Deneux
- Unité de Neuroscience, Information et Complexité, Centre National de la Recherche Scientifique, UPR 3293, Gif-sur-Yvette, France
| | - Kevin M Franks
- Department of Neurobiology, Duke University, Durham, United States
| | - Brice Bathellier
- Unité de Neuroscience, Information et Complexité, Centre National de la Recherche Scientifique, UPR 3293, Gif-sur-Yvette, France
| | - Alexander Fleischmann
- Center for Interdisciplinary Research in Biology (CIRB), Collège de France, CNRS UMR 7241, INSERM U1050, Paris, France
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27
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Connors BW. Synchrony and so much more: Diverse roles for electrical synapses in neural circuits. Dev Neurobiol 2017; 77:610-624. [PMID: 28245529 DOI: 10.1002/dneu.22493] [Citation(s) in RCA: 70] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2017] [Revised: 02/05/2017] [Accepted: 02/14/2017] [Indexed: 11/09/2022]
Abstract
Electrical synapses are neuronal gap junctions that are ubiquitous across brain regions and species. The biophysical properties of most electrical synapses are relatively simple-transcellular channels allow nearly ohmic, bidirectional flow of ionic current. Yet these connections can play remarkably diverse roles in different neural circuit contexts. Recent findings illustrate how electrical synapses may excite or inhibit, synchronize or desynchronize, augment or diminish rhythms, phase-shift, detect coincidences, enhance signals relative to noise, adapt, and interact with nonlinear membrane and transmitter-release mechanisms. Most of these functions are likely to be widespread in central nervous systems. © 2016 Wiley Periodicals, Inc. Develop Neurobiol 77: 610-624, 2017.
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Affiliation(s)
- Barry W Connors
- Department of Neuroscience, Brown University, Providence, Rhode Island
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28
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Liu F, Xiong C, Liu N. Chemoreception to aggregation pheromones in the common bed bug, Cimex lectularius. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2017; 82:62-73. [PMID: 28167332 DOI: 10.1016/j.ibmb.2017.01.012] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2016] [Revised: 01/30/2017] [Accepted: 01/31/2017] [Indexed: 06/06/2023]
Abstract
The common bed bug, Cimex lectularius, is an obligate blood-feeding insect that is resurgent worldwide, posing a threat to human beings through its biting nuisance and disease transmission. Bed bug aggregation pheromone is considered a very promising attractant for use in the monitoring and management of bed bugs, but as yet little is known regarding the sensory physiology of bed bugs related to this pheromone. This study examined how the individual components of aggregation pheromone are perceived by the olfactory receptor neurons (ORNs) housed in different types of olfactory sensilla in bed bugs and the molecular basis for the ORNs' responses to the aggregation pheromone. We found that the ORNs in the D olfactory sensilla played a predominant role in detecting all the components of aggregation pheromone except for histamine, which was only recognized by the C sensilla. Bed bugs' E sensilla, which include four functionally distinct groups, showed only a very weak but variant sensitivity (both excitatory and inhibitory) to the components of aggregation pheromone. Functional tests of 15 odorant receptors (ORs) in response to the components of aggregation pheromone revealed that most of these components were encoded by multiple ORs with various tuning properties. This study provides a comprehensive understanding of how bed bug aggregation pheromone is perceived and recognized in the peripheral olfactory system and will contribute useful information to support the development of synthetic attractants for bed bug monitoring and control.
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Affiliation(s)
- Feng Liu
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849, USA
| | - Caixing Xiong
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849, USA
| | - Nannan Liu
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849, USA.
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29
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Hemberger M, Pammer L, Laurent G. Comparative approaches to cortical microcircuits. Curr Opin Neurobiol 2016; 41:24-30. [DOI: 10.1016/j.conb.2016.07.009] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2016] [Revised: 06/28/2016] [Accepted: 07/20/2016] [Indexed: 11/27/2022]
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30
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Wanner AA, Genoud C, Friedrich RW. 3-dimensional electron microscopic imaging of the zebrafish olfactory bulb and dense reconstruction of neurons. Sci Data 2016; 3:160100. [PMID: 27824337 PMCID: PMC5100684 DOI: 10.1038/sdata.2016.100] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2016] [Accepted: 09/22/2016] [Indexed: 01/27/2023] Open
Abstract
Large-scale reconstructions of neuronal populations are critical for structural analyses of neuronal cell types and circuits. Dense reconstructions of neurons from image data require ultrastructural resolution throughout large volumes, which can be achieved by automated volumetric electron microscopy (EM) techniques. We used serial block face scanning EM (SBEM) and conductive sample embedding to acquire an image stack from an olfactory bulb (OB) of a zebrafish larva at a voxel resolution of 9.25×9.25×25 nm3. Skeletons of 1,022 neurons, 98% of all neurons in the OB, were reconstructed by manual tracing and efficient error correction procedures. An ergonomic software package, PyKNOSSOS, was created in Python for data browsing, neuron tracing, synapse annotation, and visualization. The reconstructions allow for detailed analyses of morphology, projections and subcellular features of different neuron types. The high density of reconstructions enables geometrical and topological analyses of the OB circuitry. Image data can be accessed and viewed through the neurodata web services (http://www.neurodata.io). Raw data and reconstructions can be visualized in PyKNOSSOS.
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Affiliation(s)
- Adrian A. Wanner
- Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland
- University of Basel, 4003 Basel, Switzerland
| | - Christel Genoud
- Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland
| | - Rainer W. Friedrich
- Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland
- University of Basel, 4003 Basel, Switzerland
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31
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Competitive Disinhibition Mediates Behavioral Choice and Sequences in Drosophila. Cell 2016; 167:858-870.e19. [PMID: 27720450 DOI: 10.1016/j.cell.2016.09.009] [Citation(s) in RCA: 93] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2016] [Revised: 08/03/2016] [Accepted: 09/06/2016] [Indexed: 01/19/2023]
Abstract
Even a simple sensory stimulus can elicit distinct innate behaviors and sequences. During sensorimotor decisions, competitive interactions among neurons that promote distinct behaviors must ensure the selection and maintenance of one behavior, while suppressing others. The circuit implementation of these competitive interactions is still an open question. By combining comprehensive electron microscopy reconstruction of inhibitory interneuron networks, modeling, electrophysiology, and behavioral studies, we determined the circuit mechanisms that contribute to the Drosophila larval sensorimotor decision to startle, explore, or perform a sequence of the two in response to a mechanosensory stimulus. Together, these studies reveal that, early in sensory processing, (1) reciprocally connected feedforward inhibitory interneurons implement behavioral choice, (2) local feedback disinhibition provides positive feedback that consolidates and maintains the chosen behavior, and (3) lateral disinhibition promotes sequence transitions. The combination of these interconnected circuit motifs can implement both behavior selection and the serial organization of behaviors into a sequence.
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32
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Olfactory circuits and behaviors of nematodes. Curr Opin Neurobiol 2016; 41:136-148. [PMID: 27668755 DOI: 10.1016/j.conb.2016.09.002] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2016] [Revised: 08/19/2016] [Accepted: 09/05/2016] [Indexed: 12/29/2022]
Abstract
Over one billion people worldwide are infected with parasitic nematodes. Many parasitic nematodes actively search for hosts to infect using volatile chemical cues, so understanding the olfactory signals that drive host seeking may elucidate new pathways for preventing infections. The free-living nematode Caenorhabditis elegans is a powerful model for parasitic nematodes: because sensory neuroanatomy is conserved across nematode species, an understanding of the microcircuits that mediate olfaction in C. elegans may inform studies of olfaction in parasitic nematodes. Here we review circuit mechanisms that allow C. elegans to respond to odorants, gases, and pheromones. We also highlight work on the olfactory behaviors of parasitic nematodes that lays the groundwork for future studies of their olfactory microcircuits.
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33
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Szczupak L. Functional contributions of electrical synapses in sensory and motor networks. Curr Opin Neurobiol 2016; 41:99-105. [PMID: 27649466 DOI: 10.1016/j.conb.2016.08.005] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2016] [Revised: 08/29/2016] [Accepted: 08/31/2016] [Indexed: 11/28/2022]
Abstract
Intercellular interactions in the nervous system are mediated by two types of dedicated structural arrangements: electrical and chemical synapses. Several characteristics distinguish these two mechanisms of communication, such as speed, reliability and the fact that electrical synapses are, potentially, bidirectional. Given these properties, electrical synapses can subserve, in addition to synchrony, three main interrelated network functions: signal amplification, noise reduction and/or coincidence detection. Specific network motifs in sensory and motor systems of invertebrates and vertebrates illustrate how signal transmission through electrical junctions contributes to a complex processing of information.
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Affiliation(s)
- Lidia Szczupak
- Departamento de Fisiología, Biología Molecular y Celular, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires and IFIBYNE UBA-CONICET, Pabellón II, piso 2. Ciudad Universitaria, C1428EHA Buenos Aires, Argentina.
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34
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Mechanisms Underlying Population Response Dynamics in Inhibitory Interneurons of the Drosophila Antennal Lobe. J Neurosci 2016; 36:4325-38. [PMID: 27076428 DOI: 10.1523/jneurosci.3887-15.2016] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2015] [Accepted: 02/02/2016] [Indexed: 01/19/2023] Open
Abstract
UNLABELLED Local inhibitory neurons control the timing of neural activity in many circuits. To understand how inhibition controls timing, it is important to understand the dynamics of activity in populations of local inhibitory interneurons, as well as the mechanisms that underlie these dynamics. Here we describe the in vivo response dynamics of a large population of inhibitory local neurons (LNs) in the Drosophila melanogaster antennal lobe, the analog of the vertebrate olfactory bulb, and we dissect the network and intrinsic mechanisms that give rise to these dynamics. Some LNs respond to odor onsets ("ON" cells) and others to offsets ("OFF" cells), whereas still others respond at both times. Moreover, different LNs signal odor concentration fluctuations on different timescales. Some respond rapidly, and can track rapid concentration fluctuations. Others respond slowly, and are best at tracking slow fluctuations. We found a continuous spectrum of preferred stimulation timescales among LNs, as well as a continuum of ON-OFF behavior. Using in vivo whole-cell recordings, we show that the timing of an LN's response (ON vs OFF) can be predicted from the interplay of excitatory and inhibitory synaptic currents that it receives. Meanwhile, the preferred timescale of an LN is related to its intrinsic properties. These results illustrate how a population of inhibitory interneurons can collectively encode bidirectional changes in stimulus intensity on multiple timescales, and how this can arise via an interaction between synaptic and intrinsic mechanisms. SIGNIFICANCE STATEMENT Most neural circuits contain diverse populations of inhibitory interneurons. The way inhibition shapes network activity will depend on the spiking dynamics of the interneuron population. Here we describe the dynamics of activity in a large population of inhibitory interneurons in the first brain relay of the fruit fly olfactory system. Because odor plumes fluctuate on multiple timescales, the drive to this circuit can vary over a range of frequencies. We show how synaptic and cellular mechanisms interact to recruit different interneurons at different times, and in response to different temporal features of odor stimuli. As a result, inhibition is recruited over a range of conditions, and there is the potential to tune the timing of inhibition as the environment changes.
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35
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Roland B, Jordan R, Sosulski DL, Diodato A, Fukunaga I, Wickersham I, Franks KM, Schaefer AT, Fleischmann A. Massive normalization of olfactory bulb output in mice with a 'monoclonal nose'. eLife 2016; 5. [PMID: 27177421 PMCID: PMC4919110 DOI: 10.7554/elife.16335] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2016] [Accepted: 05/12/2016] [Indexed: 12/24/2022] Open
Abstract
Perturbations in neural circuits can provide mechanistic understanding of the neural correlates of behavior. In M71 transgenic mice with a “monoclonal nose”, glomerular input patterns in the olfactory bulb are massively perturbed and olfactory behaviors are altered. To gain insights into how olfactory circuits can process such degraded inputs we characterized odor-evoked responses of olfactory bulb mitral cells and interneurons. Surprisingly, calcium imaging experiments reveal that mitral cell responses in M71 transgenic mice are largely normal, highlighting a remarkable capacity of olfactory circuits to normalize sensory input. In vivo whole cell recordings suggest that feedforward inhibition from olfactory bulb periglomerular cells can mediate this signal normalization. Together, our results identify inhibitory circuits in the olfactory bulb as a mechanistic basis for many of the behavioral phenotypes of mice with a “monoclonal nose” and highlight how substantially degraded odor input can be transformed to yield meaningful olfactory bulb output. DOI:http://dx.doi.org/10.7554/eLife.16335.001 The lining of the nose contains cells called olfactory sensory neurons that allow different smells to be detected. Odor molecules bind to receptor proteins that are embedded in the surface of the olfactory sensory neuron. Different receptors respond to different odors, and the nose contains hundreds of different receptors that work together to distinguish thousands of scents. When an odor molecule binds to a receptor, it triggers a pattern of electrical activity in the neuron. These patterns are the building blocks that allow smells to be recognized and if necessary, acted upon – by not eating food that smells rancid, for example. In 2008, researchers genetically engineered mice so that nearly all of their olfactory sensory neurons produced the same type of olfactory receptor. Unexpectedly, these mice could still detect and discriminate between many different smells. Now, Roland, Jordan, Sosulski et al. – including several of the researchers involved in the 2008 study – have tracked the brain activity of these mice as they were exposed to various smells to find out how they can recognize such a wide range of odors with such a limited repertoire of receptors. The results of the experiments revealed that neural circuits in the brains of these modified mice still produce largely normal patterns of activity in response to an odor. This ‘normalization’ of activity relies on a fine balance between ‘excitatory’ processes that increase the activity of neurons and ‘inhibitory’ processes that reduce this activity. Overall, the findings of Roland, Jordan, Sosulski et al. provide a link between how a scent is detected and how this information is processed in the brain. In future experiments, it will be important to determine how this processing of odor information is influenced by learning and experience to generate the long-lasting odor memories that guide behavior. DOI:http://dx.doi.org/10.7554/eLife.16335.002
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Affiliation(s)
- Benjamin Roland
- Center for Interdisciplinary Research in Biology, Collège de France, INSERM U1050, CNRS UMR 7241, Paris, France
| | - Rebecca Jordan
- The Francis Crick Institute, London, United Kingdom.,Department of Neuroscience, Physiology and Pharmacology, University College London, London, United Kingdom
| | - Dara L Sosulski
- Wolfson Institute for Biomedical Research, University College London, London, United Kingdom
| | - Assunta Diodato
- Center for Interdisciplinary Research in Biology, Collège de France, INSERM U1050, CNRS UMR 7241, Paris, France
| | - Izumi Fukunaga
- The Francis Crick Institute, London, United Kingdom.,Behavioural Neurophysiology, Max-Planck-Institute for Medical Research, Heidelberg, Germany
| | - Ian Wickersham
- MIT Genetic Neuroengineering Group, McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, United States
| | - Kevin M Franks
- Department of Neurobiology, Duke University, Durham, United States
| | - Andreas T Schaefer
- The Francis Crick Institute, London, United Kingdom.,Department of Neuroscience, Physiology and Pharmacology, University College London, London, United Kingdom.,Behavioural Neurophysiology, Max-Planck-Institute for Medical Research, Heidelberg, Germany.,Department of Anatomy and Cell Biology, Faculty of Medicine, University of Heidelberg, Heidelberg, Germany
| | - Alexander Fleischmann
- Center for Interdisciplinary Research in Biology, Collège de France, INSERM U1050, CNRS UMR 7241, Paris, France
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36
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Berck ME, Khandelwal A, Claus L, Hernandez-Nunez L, Si G, Tabone CJ, Li F, Truman JW, Fetter RD, Louis M, Samuel AD, Cardona A. The wiring diagram of a glomerular olfactory system. eLife 2016; 5. [PMID: 27177418 PMCID: PMC4930330 DOI: 10.7554/elife.14859] [Citation(s) in RCA: 123] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2016] [Accepted: 05/06/2016] [Indexed: 12/12/2022] Open
Abstract
The sense of smell enables animals to react to long-distance cues according to learned and innate valences. Here, we have mapped with electron microscopy the complete wiring diagram of the Drosophila larval antennal lobe, an olfactory neuropil similar to the vertebrate olfactory bulb. We found a canonical circuit with uniglomerular projection neurons (uPNs) relaying gain-controlled ORN activity to the mushroom body and the lateral horn. A second, parallel circuit with multiglomerular projection neurons (mPNs) and hierarchically connected local neurons (LNs) selectively integrates multiple ORN signals already at the first synapse. LN-LN synaptic connections putatively implement a bistable gain control mechanism that either computes odor saliency through panglomerular inhibition, or allows some glomeruli to respond to faint aversive odors in the presence of strong appetitive odors. This complete wiring diagram will support experimental and theoretical studies towards bridging the gap between circuits and behavior. DOI:http://dx.doi.org/10.7554/eLife.14859.001 Our sense of smell can tell us about bread being baked faraway in the kitchen, or whether a leftover piece finally went bad. Similarly to the eyes, the nose enables us to make up a mental image of what lies at a distance. In mammals, the surface of the nose hosts a huge number of olfactory sensory cells, each of which is tuned to respond to a small set of scent molecules. The olfactory sensory cells communicate with a region of the brain called the olfactory bulb. Olfactory sensory cells of the same type converge onto the same small pocket of the olfactory bulb, forming a structure called a glomerulus. Similarly to how the retina generates an image, the combined activity of multiple glomeruli defines an odor. A particular smell is the combination of many volatile compounds, the odorants. Therefore the interactions between different olfactory glomeruli are important for defining the nature of the perceived odor. Although the types of neurons involved in these interactions were known in insects, fish and mice, a precise wiring diagram of a complete set of glomeruli had not been described. In particular, the points of contact through which neurons communicate with each other – known as synapses – among all the neurons participating in an olfactory system were not known. Berck, Khandelwal et al. have now taken advantage of the small size of the olfactory system of the larvae of Drosophila fruit flies to fully describe, using high-resolution imaging, all its neurons and their synapses. The results define the complete wiring diagram of the neural circuit that processes the signals sent by olfactory sensory neurons in the larva’s olfactory circuits. In addition to the neurons that read out the activity of a single glomerulus and send it to higher areas of the brain for further processing, there are also numerous neurons that read out activity from multiple glomeruli. These neurons represent a system, encoded in the genome, for quickly extracting valuable olfactory information and then relaying it to other areas of the brain. An essential aspect of sensation is the ability to stop noticing a stimulus if it doesn't change. This allows an animal to, for example, find food by moving in a direction that increases the intensity of an odor. Inhibition mediates some aspects of this capability. The discovery of structure in the inhibitory connections among glomeruli, together with prior findings on the inner workings of the olfactory system, enabled Berck, Khandelwal et al. to hypothesize how the olfactory circuits enable odor gradients to be navigated. Further investigation revealed more about how the circuits could detect slight changes in odor concentration regardless of whether the overall odor intensity is strong or faint. And, crucially, it revealed how the worst odors – which can signal danger – can still be perceived in the presence of very strong pleasant odors. With the wiring diagram, theories about the sense of smell can now be tested using the genetic tools available for Drosophila, leading to an understanding of how neural circuits work. DOI:http://dx.doi.org/10.7554/eLife.14859.002
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Affiliation(s)
- Matthew E Berck
- Department of Physics, Harvard University, Cambridge, United States.,Center for Brain Science, Harvard University, Cambridge, United States
| | - Avinash Khandelwal
- EMBL-CRG Systems Biology Program, Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.,Universitat Pompeu Fabra, Barcelona, Spain
| | - Lindsey Claus
- Department of Physics, Harvard University, Cambridge, United States.,Center for Brain Science, Harvard University, Cambridge, United States
| | - Luis Hernandez-Nunez
- Department of Physics, Harvard University, Cambridge, United States.,Center for Brain Science, Harvard University, Cambridge, United States
| | - Guangwei Si
- Department of Physics, Harvard University, Cambridge, United States.,Center for Brain Science, Harvard University, Cambridge, United States
| | | | - Feng Li
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - James W Truman
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Rick D Fetter
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
| | - Matthieu Louis
- EMBL-CRG Systems Biology Program, Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.,Universitat Pompeu Fabra, Barcelona, Spain
| | - Aravinthan Dt Samuel
- Department of Physics, Harvard University, Cambridge, United States.,Center for Brain Science, Harvard University, Cambridge, United States
| | - Albert Cardona
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States
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37
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Wanner AA, Genoud C, Masudi T, Siksou L, Friedrich RW. Dense EM-based reconstruction of the interglomerular projectome in the zebrafish olfactory bulb. Nat Neurosci 2016; 19:816-25. [PMID: 27089019 DOI: 10.1038/nn.4290] [Citation(s) in RCA: 74] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2016] [Accepted: 03/22/2016] [Indexed: 12/12/2022]
Abstract
The dense reconstruction of neuronal circuits from volumetric electron microscopy (EM) data has the potential to uncover fundamental structure-function relationships in the brain. To address bottlenecks in the workflow of this emerging methodology, we developed a procedure for conductive sample embedding and a pipeline for neuron reconstruction. We reconstructed ∼98% of all neurons (>1,000) in the olfactory bulb of a zebrafish larva with high accuracy and annotated all synapses on subsets of neurons representing different types. The organization of the larval olfactory bulb showed marked differences from that of the adult but similarities to that of the insect antennal lobe. Interneurons comprised multiple types but granule cells were rare. Interglomerular projections of interneurons were complex and bidirectional. Projections were not random but biased toward glomerular groups receiving input from common types of sensory neurons. Hence, the interneuron network in the olfactory bulb exhibits a specific topological organization that is governed by glomerular identity.
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Affiliation(s)
- Adrian A Wanner
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.,University of Basel, Basel, Switzerland
| | - Christel Genoud
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland
| | - Tafheem Masudi
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.,University of Basel, Basel, Switzerland
| | - Léa Siksou
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland
| | - Rainer W Friedrich
- Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.,University of Basel, Basel, Switzerland
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38
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Sato TK, Haider B, Häusser M, Carandini M. An excitatory basis for divisive normalization in visual cortex. Nat Neurosci 2016; 19:568-70. [PMID: 26878671 PMCID: PMC4817833 DOI: 10.1038/nn.4249] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2015] [Accepted: 01/20/2016] [Indexed: 12/25/2022]
Abstract
Neurons in visual cortex are connected not only locally, but also through networks of distal connectivity. These distal networks recruit both excitatory and inhibitory synapses and result in divisive normalization. Normalization is traditionally thought to result from increases in synaptic inhibition. By combining optogenetic stimulation and intracellular recordings in mouse visual cortex, we found that, on the contrary, normalization is a result of a decrease in synaptic excitation.
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Affiliation(s)
- Tatsuo K Sato
- UCL Institute of Ophthalmology, University College London, London, UK
| | - Bilal Haider
- UCL Institute of Ophthalmology, University College London, London, UK
| | - Michael Häusser
- Wolfson Institute for Biomedical Research, University College London, London, UK
| | - Matteo Carandini
- UCL Institute of Ophthalmology, University College London, London, UK
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39
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Qiao M, Sanes JR. Genetic Method for Labeling Electrically Coupled Cells: Application to Retina. Front Mol Neurosci 2016; 8:81. [PMID: 26778956 PMCID: PMC4703850 DOI: 10.3389/fnmol.2015.00081] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2015] [Accepted: 12/11/2015] [Indexed: 01/08/2023] Open
Abstract
Understanding how the nervous system functions requires mapping synaptic connections between neurons. Several methods are available for imaging neurons connected by chemical synapses, but few enable marking neurons connected by electrical synapses. Here, we demonstrate that a peptide transporter, Pept2, can be used for this purpose. Pept2 transports a gap junction-permeable fluorophore-coupled dipeptide, beta-alanine-lysine-N-7-amino-4-methyl coumarin-3-acid (βALA). Cre-dependent expression of pept2 in specific neurons followed by incubation in βALA labeled electrically coupled synaptic partners. Using this method, we analyze light-dependent modulation of electrical connectivity among retinal horizontal cells.
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Affiliation(s)
- Mu Qiao
- Center for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge MA, USA
| | - Joshua R Sanes
- Center for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge MA, USA
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40
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Abstract
Zebrafish (Danio rerio) is a newly emerged vertebrate animal model with a conserved gross architecture of the brain and a rich repertoire of behaviors. Due to the optical transparency and structural simplicity of its brain, larval zebrafish has become an ideal in vivo model for dissecting neural mechanisms of brain functions at a whole-brain scale based on a strategy that spans scales from synapses, neurons, and circuits to behaviors. Whole-cell patch-clamp recording is an indispensable approach for studying synaptic and circuit mechanisms of brain functions. Due to the small size of neurons in the zebrafish brain, it is challenging to get whole-cell recordings from these cells. Here, we describe a protocol for obtaining in vivo whole-cell patch-clamp recordings from neurons in larval zebrafish.
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41
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Neuronal organization of the main olfactory bulb revisited. Anat Sci Int 2015; 91:115-27. [PMID: 26514846 DOI: 10.1007/s12565-015-0309-7] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Accepted: 10/08/2015] [Indexed: 10/22/2022]
Abstract
The main olfactory bulb is now one of the most interesting parts of the brain; firstly as an excellent model for understanding the neural mechanisms of sensory information processing, and secondly as one of the most prominent sites whose interneurons are generated continuously in the postnatal and adult periods. The neuronal organization of the main olfactory bulb is fundamentally important as the basis of ongoing and future studies. In this review we focus on four issues, some of which appear not to have been recognized previously: (1) axons of periglomerular cells, (2) the heterogeneity and peculiarity of dopamine-GABAergic juxtaglomerular cells, (3) neurons participating in the interglomerular connections, and (4) newly found transglomerular cells.
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42
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Banerjee A, Marbach F, Anselmi F, Koh MS, Davis MB, Garcia da Silva P, Delevich K, Oyibo HK, Gupta P, Li B, Albeanu DF. An Interglomerular Circuit Gates Glomerular Output and Implements Gain Control in the Mouse Olfactory Bulb. Neuron 2015; 87:193-207. [PMID: 26139373 DOI: 10.1016/j.neuron.2015.06.019] [Citation(s) in RCA: 115] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2014] [Revised: 04/24/2015] [Accepted: 06/10/2015] [Indexed: 10/23/2022]
Abstract
Odors elicit distributed activation of glomeruli in the olfactory bulb (OB). Crosstalk between co-active glomeruli has been proposed to perform a variety of computations, facilitating efficient extraction of sensory information by the cortex. Dopaminergic/GABAergic cells in the OB, which can be identified by their expression of the dopamine transporter (DAT), provide the earliest opportunity for such crosstalk. Here we show in mice that DAT+ cells carry concentration-dependent odor signals and broadcast focal glomerular inputs throughout the OB to cause suppression of mitral/tufted (M/T) cell firing, an effect that is mediated by the external tufted (ET) cells coupled to DAT+ cells via chemical and electrical synapses. We find that DAT+ cells implement gain control and decorrelate odor representations in the M/T cell population. Our results further indicate that ET cells are gatekeepers of glomerular output and prime determinants of M/T responsiveness.
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Affiliation(s)
- Arkarup Banerjee
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Watson School of Biological Sciences, Cold Spring Harbor, NY 11724, USA
| | - Fred Marbach
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Watson School of Biological Sciences, Cold Spring Harbor, NY 11724, USA
| | | | - Matthew S Koh
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Watson School of Biological Sciences, Cold Spring Harbor, NY 11724, USA
| | - Martin B Davis
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
| | - Pedro Garcia da Silva
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Champalimaud Neuroscience Programme, Champalimaud Centre for the Unknown, Lisbon 1400-038, Portugal
| | - Kristen Delevich
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Watson School of Biological Sciences, Cold Spring Harbor, NY 11724, USA
| | - Hassana K Oyibo
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Watson School of Biological Sciences, Cold Spring Harbor, NY 11724, USA
| | - Priyanka Gupta
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India
| | - Bo Li
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Watson School of Biological Sciences, Cold Spring Harbor, NY 11724, USA
| | - Dinu F Albeanu
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Watson School of Biological Sciences, Cold Spring Harbor, NY 11724, USA.
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Larsch J, Flavell SW, Liu Q, Gordus A, Albrecht DR, Bargmann CI. A Circuit for Gradient Climbing in C. elegans Chemotaxis. Cell Rep 2015; 12:1748-60. [PMID: 26365196 PMCID: PMC5045890 DOI: 10.1016/j.celrep.2015.08.032] [Citation(s) in RCA: 94] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2015] [Revised: 07/20/2015] [Accepted: 08/07/2015] [Indexed: 12/12/2022] Open
Abstract
Animals have a remarkable ability to track dynamic sensory information. For example, the nematode Caenorhabditis elegans can locate a diacetyl odor source across a 100,000-fold concentration range. Here, we relate neuronal properties, circuit implementation, and behavioral strategies underlying this robust navigation. Diacetyl responses in AWA olfactory neurons are concentration and history dependent; AWA integrates over time at low odor concentrations, but as concentrations rise, it desensitizes rapidly through a process requiring cilia transport. After desensitization, AWA retains sensitivity to small odor increases. The downstream AIA interneuron amplifies weak odor inputs and desensitizes further, resulting in a stereotyped response to odor increases over three orders of magnitude. The AWA-AIA circuit drives asymmetric behavioral responses to odor increases that facilitate gradient climbing. The adaptation-based circuit motif embodied by AWA and AIA shares computational properties with bacterial chemotaxis and the vertebrate retina, each providing a solution for maintaining sensitivity across a dynamic range.
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Affiliation(s)
- Johannes Larsch
- Howard Hughes Medical Institute, Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University, New York, NY 10065, USA
| | - Steven W Flavell
- Howard Hughes Medical Institute, Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University, New York, NY 10065, USA
| | - Qiang Liu
- Howard Hughes Medical Institute, Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University, New York, NY 10065, USA
| | - Andrew Gordus
- Howard Hughes Medical Institute, Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University, New York, NY 10065, USA
| | - Dirk R Albrecht
- Howard Hughes Medical Institute, Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University, New York, NY 10065, USA
| | - Cornelia I Bargmann
- Howard Hughes Medical Institute, Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University, New York, NY 10065, USA.
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Gilra A, Bhalla US. Bulbar microcircuit model predicts connectivity and roles of interneurons in odor coding. PLoS One 2015; 10:e0098045. [PMID: 25942312 PMCID: PMC4420273 DOI: 10.1371/journal.pone.0098045] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2014] [Accepted: 04/23/2014] [Indexed: 01/13/2023] Open
Abstract
Stimulus encoding by primary sensory brain areas provides a data-rich context for understanding their circuit mechanisms. The vertebrate olfactory bulb is an input area having unusual two-layer dendro-dendritic connections whose roles in odor coding are unclear. To clarify these roles, we built a detailed compartmental model of the rat olfactory bulb that synthesizes a much wider range of experimental observations on bulbar physiology and response dynamics than has hitherto been modeled. We predict that superficial-layer inhibitory interneurons (periglomerular cells) linearize the input-output transformation of the principal neurons (mitral cells), unlike previous models of contrast enhancement. The linearization is required to replicate observed linear summation of mitral odor responses. Further, in our model, action-potentials back-propagate along lateral dendrites of mitral cells and activate deep-layer inhibitory interneurons (granule cells). Using this, we propose sparse, long-range inhibition between mitral cells, mediated by granule cells, to explain how the respiratory phases of odor responses of sister mitral cells can be sometimes decorrelated as observed, despite receiving similar receptor input. We also rule out some alternative mechanisms. In our mechanism, we predict that a few distant mitral cells receiving input from different receptors, inhibit sister mitral cells differentially, by activating disjoint subsets of granule cells. This differential inhibition is strong enough to decorrelate their firing rate phases, and not merely modulate their spike timing. Thus our well-constrained model suggests novel computational roles for the two most numerous classes of interneurons in the bulb.
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Affiliation(s)
- Aditya Gilra
- National Centre for Biological Sciences (NCBS), Tata Institute of Fundamental Research (TIFR), Bangalore, 560065, India
| | - Upinder S. Bhalla
- National Centre for Biological Sciences (NCBS), Tata Institute of Fundamental Research (TIFR), Bangalore, 560065, India
- * E-mail:
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Mainland JD, Lundström JN, Reisert J, Lowe G. From molecule to mind: an integrative perspective on odor intensity. Trends Neurosci 2014; 37:443-54. [PMID: 24950600 PMCID: PMC4119848 DOI: 10.1016/j.tins.2014.05.005] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Revised: 05/01/2014] [Accepted: 05/15/2014] [Indexed: 11/16/2022]
Abstract
A fundamental problem in systems neuroscience is mapping the physical properties of a stimulus to perceptual characteristics. In vision, wavelength translates into color; in audition, frequency translates into pitch. Although odorant concentration is a key feature of olfactory stimuli, we do not know how concentration is translated into perceived intensity by the olfactory system. A variety of neural responses at several levels of processing have been reported to vary with odorant concentration, suggesting specific coding models. However, it remains unclear which, if any, of these phenomena underlie the perception of odor intensity. Here, we provide an overview of current models at different stages of olfactory processing, and identify promising avenues for future research.
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Affiliation(s)
- Joel D Mainland
- Monell Chemical Senses Center, Philadelphia, PA, USA; Department of Neuroscience, University of Pennsylvania, Philadelphia, PA, USA.
| | - Johan N Lundström
- Monell Chemical Senses Center, Philadelphia, PA, USA; Department of Clinical Neuroscience, Karolinska Institutet, Stockholm, Sweden; Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
| | | | - Graeme Lowe
- Monell Chemical Senses Center, Philadelphia, PA, USA
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Friedrich RW, Wiechert MT. Neuronal circuits and computations: pattern decorrelation in the olfactory bulb. FEBS Lett 2014; 588:2504-13. [PMID: 24911205 DOI: 10.1016/j.febslet.2014.05.055] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2014] [Revised: 05/28/2014] [Accepted: 05/29/2014] [Indexed: 11/15/2022]
Abstract
Neuronal circuits in the olfactory bulb transform odor-evoked activity patterns across the input channels, the olfactory glomeruli, into distributed activity patterns across the output neurons, the mitral cells. One computation associated with this transformation is a decorrelation of activity patterns representing similar odors. Such a decorrelation has various benefits for the classification and storage of information by associative networks in higher brain areas. Experimental results from adult zebrafish show that pattern decorrelation involves a redistribution of activity across the population of mitral cells. These observations imply that pattern decorrelation cannot be explained by a global scaling mechanism but that it depends on interactions between distinct subsets of neurons in the network. This article reviews insights into the network mechanism underlying pattern decorrelation and discusses recent results that link pattern decorrelation in the olfactory bulb to odor discrimination behavior.
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Affiliation(s)
- Rainer W Friedrich
- Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland; University of Basel, 4003 Basel, Switzerland.
| | - Martin T Wiechert
- Laboratory for Perception and Memory, Institut Pasteur, 25 rue du Docteur Roux, 75724 Paris, France; CNRS UMR3571, 25 rue du Docteur Roux, 75724 Paris, France
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Fritschy JM, Panzanelli P. GABAAreceptors and plasticity of inhibitory neurotransmission in the central nervous system. Eur J Neurosci 2014; 39:1845-65. [DOI: 10.1111/ejn.12534] [Citation(s) in RCA: 144] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2014] [Revised: 01/29/2014] [Accepted: 01/29/2014] [Indexed: 12/11/2022]
Affiliation(s)
- Jean-Marc Fritschy
- Institute of Pharmacology and Toxicology; University of Zurich; Winterthurerstrasse 190 8057 Zurich Switzerland
- Neuroscience Center Zurich; University of Zurich and ETH; Zurich Switzerland
| | - Patrizia Panzanelli
- Department of Neuroscience Rita Levi Montalcini; University of Turin; Turin Italy
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Uchida N, Eshel N, Watabe-Uchida M. Division of labor for division: inhibitory interneurons with different spatial landscapes in the olfactory system. Neuron 2014; 80:1106-9. [PMID: 24314722 DOI: 10.1016/j.neuron.2013.11.013] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Normalizing neural responses by the sum of population activity allows the nervous system to adjust its sensitivity according to task demands, facilitating intensity-invariant information processing. In this issue of Neuron, two studies, Kato et al. (2013) and Miyamichi et al. (2013), suggest that parvalbumin-positive interneurons in the olfactory bulb play a role in this process.
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Affiliation(s)
- Naoshige Uchida
- Center for Brain Science, Department of Molecular and Cellular Biology, 16 Divinity Avenue, Cambridge, MA 02138, USA.
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